Query 023822
Match_columns 276
No_of_seqs 698 out of 1127
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 13:22:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 2.5E-47 8.4E-52 298.3 35.0 243 24-275 3-252 (304)
2 3ow8_A WD repeat-containing pr 100.0 4E-47 1.4E-51 299.1 33.4 241 25-275 71-314 (321)
3 1vyh_C Platelet-activating fac 100.0 1.7E-46 6E-51 305.0 31.6 239 27-275 101-362 (410)
4 1got_B GT-beta; complex (GTP-b 100.0 5.2E-46 1.8E-50 295.2 33.5 247 24-275 45-336 (340)
5 1vyh_C Platelet-activating fac 100.0 1.6E-46 5.4E-51 305.3 30.0 242 24-275 140-404 (410)
6 4gqb_B Methylosome protein 50; 100.0 1.4E-45 4.9E-50 292.4 32.1 234 30-275 78-324 (344)
7 2pbi_B Guanine nucleotide-bind 100.0 3.4E-45 1.2E-49 291.9 33.3 243 25-275 55-350 (354)
8 3ow8_A WD repeat-containing pr 100.0 4.5E-45 1.5E-49 287.4 31.7 239 27-275 25-272 (321)
9 2ynn_A Coatomer subunit beta'; 100.0 6.3E-45 2.1E-49 284.6 31.3 242 24-275 45-296 (304)
10 3frx_A Guanine nucleotide-bind 100.0 5.1E-44 1.8E-48 281.3 32.5 239 23-273 6-259 (319)
11 2pm7_B Protein transport prote 100.0 5.3E-44 1.8E-48 278.5 30.8 244 28-275 3-278 (297)
12 3iz6_a 40S ribosomal protein R 100.0 6.9E-44 2.4E-48 287.1 31.2 250 24-275 56-368 (380)
13 4g56_B MGC81050 protein; prote 100.0 5.3E-44 1.8E-48 285.3 27.8 238 26-275 86-336 (357)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-43 6.1E-48 281.1 30.1 246 23-275 4-276 (345)
15 4ery_A WD repeat-containing pr 100.0 2E-42 6.9E-47 271.4 34.5 247 22-275 11-261 (312)
16 3frx_A Guanine nucleotide-bind 100.0 3.8E-42 1.3E-46 270.6 32.8 241 25-275 56-310 (319)
17 4ery_A WD repeat-containing pr 100.0 4.7E-42 1.6E-46 269.3 32.4 242 24-275 55-305 (312)
18 2xzm_R RACK1; ribosome, transl 100.0 3.6E-42 1.2E-46 273.5 30.9 241 25-275 67-333 (343)
19 2xzm_R RACK1; ribosome, transl 100.0 9.6E-42 3.3E-46 271.0 32.7 238 23-272 10-276 (343)
20 2hes_X YDR267CP; beta-propelle 100.0 4.9E-42 1.7E-46 271.2 30.3 244 22-275 2-273 (330)
21 3bg1_A Protein SEC13 homolog; 100.0 6E-43 2E-47 274.8 24.7 241 28-275 7-286 (316)
22 1erj_A Transcriptional repress 100.0 6.7E-42 2.3E-46 276.7 31.5 237 32-275 62-334 (393)
23 1nr0_A Actin interacting prote 100.0 3E-42 1E-46 293.4 30.9 246 23-275 179-560 (611)
24 1erj_A Transcriptional repress 100.0 1.5E-41 5.1E-46 274.7 33.2 234 35-275 124-382 (393)
25 1nr0_A Actin interacting prote 100.0 1.8E-41 6.2E-46 288.6 34.2 246 24-275 49-348 (611)
26 3jrp_A Fusion protein of prote 100.0 9.1E-42 3.1E-46 274.1 30.5 246 26-275 3-280 (379)
27 2hes_X YDR267CP; beta-propelle 100.0 1.5E-41 5.1E-46 268.5 31.0 244 26-275 48-321 (330)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.6E-41 1.6E-45 267.3 32.6 243 30-275 57-328 (345)
29 4gqb_B Methylosome protein 50; 100.0 1.2E-41 4.1E-46 269.9 27.6 235 31-275 27-282 (344)
30 4aow_A Guanine nucleotide-bind 100.0 1.4E-40 4.8E-45 263.6 33.1 251 18-275 22-330 (340)
31 4g56_B MGC81050 protein; prote 100.0 9.1E-42 3.1E-46 272.4 25.6 237 30-275 38-294 (357)
32 1gxr_A ESG1, transducin-like e 100.0 5.5E-40 1.9E-44 259.7 35.3 232 32-275 95-330 (337)
33 3dwl_C Actin-related protein 2 100.0 1.2E-42 4.2E-47 279.5 19.3 239 29-274 6-274 (377)
34 2ymu_A WD-40 repeat protein; u 100.0 1.6E-40 5.4E-45 281.2 32.4 235 26-275 336-573 (577)
35 3f3f_A Nucleoporin SEH1; struc 100.0 2E-40 6.8E-45 263.0 31.0 240 28-275 5-330 (351)
36 3mmy_A MRNA export factor; mRN 100.0 2.1E-40 7.1E-45 265.0 28.3 247 21-275 26-339 (368)
37 3dm0_A Maltose-binding peripla 100.0 7.7E-40 2.6E-44 282.6 32.5 239 24-273 372-624 (694)
38 3mkq_A Coatomer beta'-subunit; 100.0 1.1E-39 3.8E-44 286.2 33.2 242 24-275 3-252 (814)
39 1k8k_C P40, ARP2/3 complex 41 100.0 2.3E-39 8E-44 259.6 31.4 239 30-275 4-267 (372)
40 3zwl_B Eukaryotic translation 100.0 2E-39 6.7E-44 259.5 30.2 241 22-273 20-281 (369)
41 1sq9_A Antiviral protein SKI8; 100.0 7.4E-40 2.5E-44 264.9 27.5 238 25-275 7-315 (397)
42 4h5i_A Guanine nucleotide-exch 100.0 2.3E-39 8E-44 259.1 28.2 192 79-275 136-336 (365)
43 2ymu_A WD-40 repeat protein; u 100.0 9E-39 3.1E-43 270.4 32.6 236 25-275 294-532 (577)
44 3k26_A Polycomb protein EED; W 100.0 1.1E-39 3.8E-44 260.7 25.6 237 33-275 68-359 (366)
45 1sq9_A Antiviral protein SKI8; 100.0 2E-39 7E-44 262.3 26.8 244 24-275 52-388 (397)
46 3dm0_A Maltose-binding peripla 100.0 9.8E-39 3.4E-43 275.7 32.0 241 26-275 422-686 (694)
47 1gxr_A ESG1, transducin-like e 100.0 1.4E-38 4.7E-43 251.7 30.2 233 30-275 47-289 (337)
48 3odt_A Protein DOA1; ubiquitin 100.0 2.4E-38 8.2E-43 247.9 30.5 241 22-275 6-289 (313)
49 3zwl_B Eukaryotic translation 100.0 5E-38 1.7E-42 251.3 32.9 241 23-275 63-339 (369)
50 3jro_A Fusion protein of prote 100.0 1.2E-39 4E-44 283.3 25.2 246 27-275 2-278 (753)
51 4aez_A CDC20, WD repeat-contai 100.0 5.3E-38 1.8E-42 254.6 32.7 232 33-275 133-373 (401)
52 3vl1_A 26S proteasome regulato 100.0 8.9E-39 3E-43 260.4 28.1 237 29-275 93-358 (420)
53 3ei3_B DNA damage-binding prot 100.0 2.2E-38 7.7E-43 255.2 29.3 246 22-275 61-332 (383)
54 1r5m_A SIR4-interacting protei 100.0 1.6E-38 5.3E-43 258.9 28.5 242 23-275 138-418 (425)
55 2pm9_A Protein WEB1, protein t 100.0 4.9E-39 1.7E-43 261.5 25.5 235 32-275 65-330 (416)
56 2j04_B YDR362CP, TAU91; beta p 100.0 3.2E-39 1.1E-43 268.2 24.3 240 28-275 201-510 (524)
57 2pbi_B Guanine nucleotide-bind 100.0 2E-38 6.9E-43 252.8 28.0 203 25-234 145-354 (354)
58 1yfq_A Cell cycle arrest prote 100.0 2E-38 6.8E-43 251.5 27.2 241 27-275 4-275 (342)
59 1got_B GT-beta; complex (GTP-b 100.0 2.2E-38 7.5E-43 251.4 27.4 202 25-234 134-340 (340)
60 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-38 9.4E-43 256.3 28.4 240 25-270 72-332 (402)
61 4a11_B DNA excision repair pro 100.0 8E-38 2.7E-42 253.5 31.0 244 25-275 34-358 (408)
62 4gga_A P55CDC, cell division c 100.0 9.1E-38 3.1E-42 254.7 31.2 236 27-275 140-388 (420)
63 1r5m_A SIR4-interacting protei 100.0 3.6E-38 1.2E-42 256.7 28.8 234 30-275 41-312 (425)
64 3i2n_A WD repeat-containing pr 100.0 1.1E-38 3.9E-43 254.1 24.7 238 32-275 63-346 (357)
65 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-37 4.1E-42 284.3 34.2 243 27-275 608-906 (1249)
66 3dw8_B Serine/threonine-protei 100.0 1.6E-38 5.6E-43 260.8 25.7 236 32-275 26-366 (447)
67 1k8k_C P40, ARP2/3 complex 41 100.0 8.5E-38 2.9E-42 250.5 29.3 244 24-275 42-354 (372)
68 3ei3_B DNA damage-binding prot 100.0 4.9E-38 1.7E-42 253.2 27.8 237 30-275 114-375 (383)
69 3vl1_A 26S proteasome regulato 100.0 4.1E-38 1.4E-42 256.5 26.3 243 23-275 128-412 (420)
70 3dw8_B Serine/threonine-protei 100.0 6.4E-38 2.2E-42 257.3 26.3 243 24-274 71-439 (447)
71 3v7d_B Cell division control p 100.0 4E-37 1.4E-41 253.9 30.8 235 26-275 113-374 (464)
72 2pm9_A Protein WEB1, protein t 100.0 1.5E-38 5E-43 258.7 21.2 244 25-275 104-407 (416)
73 2xyi_A Probable histone-bindin 100.0 1.7E-37 5.7E-42 253.8 27.4 239 28-275 122-403 (430)
74 3k26_A Polycomb protein EED; W 100.0 6.9E-38 2.4E-42 250.3 24.5 238 30-275 14-311 (366)
75 3dwl_C Actin-related protein 2 100.0 1.7E-38 5.8E-43 255.3 20.8 247 25-275 46-372 (377)
76 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-38 3.6E-43 265.1 19.7 232 33-275 132-421 (524)
77 3iz6_a 40S ribosomal protein R 100.0 1E-37 3.4E-42 251.2 24.5 209 24-239 147-377 (380)
78 3i2n_A WD repeat-containing pr 100.0 6.3E-38 2.2E-42 249.8 23.1 240 28-275 12-284 (357)
79 3mkq_A Coatomer beta'-subunit; 100.0 5.3E-37 1.8E-41 269.2 31.1 241 24-274 45-295 (814)
80 3gre_A Serine/threonine-protei 100.0 9.4E-38 3.2E-42 255.8 24.3 244 23-275 51-352 (437)
81 4e54_B DNA damage-binding prot 100.0 1.3E-37 4.3E-42 254.9 24.5 242 24-270 109-363 (435)
82 4ggc_A P55CDC, cell division c 100.0 4.6E-36 1.6E-40 235.5 31.7 234 29-275 62-308 (318)
83 1yfq_A Cell cycle arrest prote 100.0 3.5E-37 1.2E-41 244.3 25.4 235 27-274 49-315 (342)
84 3gre_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 251.5 25.5 240 32-275 109-433 (437)
85 4e54_B DNA damage-binding prot 100.0 6.5E-37 2.2E-41 250.7 24.0 239 25-274 155-422 (435)
86 3v7d_B Cell division control p 100.0 8E-36 2.7E-40 246.1 30.5 236 23-275 151-414 (464)
87 4gq1_A NUP37; propeller, trans 100.0 4.5E-37 1.5E-41 248.4 21.6 233 35-274 90-382 (393)
88 4aez_A CDC20, WD repeat-contai 100.0 1.2E-35 4.1E-40 240.7 28.7 230 31-275 88-329 (401)
89 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-35 1.5E-39 240.5 32.0 235 25-274 190-430 (445)
90 2pm7_B Protein transport prote 100.0 1E-35 3.5E-40 231.7 26.7 210 24-236 43-284 (297)
91 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-35 7.4E-40 269.5 33.1 206 23-235 646-911 (1249)
92 4aow_A Guanine nucleotide-bind 100.0 2.7E-35 9.1E-40 233.2 28.5 212 25-239 77-339 (340)
93 2oaj_A Protein SNI1; WD40 repe 100.0 3E-35 1E-39 259.3 31.6 232 30-272 13-297 (902)
94 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-35 6.3E-40 242.1 26.6 231 23-275 162-407 (435)
95 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-36 4.1E-41 241.7 18.9 222 41-274 43-284 (343)
96 3vu4_A KMHSV2; beta-propeller 100.0 4.7E-35 1.6E-39 233.4 27.8 238 25-275 10-264 (355)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.1E-35 2.1E-39 240.0 29.0 233 29-271 97-374 (450)
98 3bg1_A Protein SEC13 homolog; 100.0 6.6E-36 2.2E-40 234.8 21.6 208 26-236 49-292 (316)
99 1pgu_A Actin interacting prote 100.0 9E-35 3.1E-39 247.5 30.3 240 25-275 54-321 (615)
100 4h5i_A Guanine nucleotide-exch 100.0 4.1E-35 1.4E-39 234.5 26.3 197 32-237 131-343 (365)
101 1pgu_A Actin interacting prote 100.0 2.3E-35 8E-40 251.1 26.4 234 31-275 15-276 (615)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 7.8E-35 2.7E-39 239.4 28.0 233 34-275 4-332 (450)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-35 1.2E-39 238.0 25.4 232 35-275 35-292 (402)
104 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-34 8.4E-39 235.5 30.3 223 31-275 130-358 (435)
105 2j04_A TAU60, YPL007P, hypothe 100.0 4.3E-35 1.5E-39 239.4 23.7 227 32-274 13-290 (588)
106 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-33 4.2E-38 232.0 32.6 234 23-275 148-384 (445)
107 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-34 4.6E-39 255.1 27.5 125 26-155 91-245 (902)
108 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-34 4.2E-39 236.7 25.1 221 32-271 83-350 (588)
109 3jrp_A Fusion protein of prote 100.0 1.2E-33 4E-38 226.8 26.0 213 23-238 44-288 (379)
110 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-33 9.5E-38 221.8 26.5 218 25-245 48-345 (351)
111 1l0q_A Surface layer protein; 100.0 6.9E-32 2.4E-36 217.8 33.0 238 24-275 22-268 (391)
112 4gga_A P55CDC, cell division c 100.0 2.3E-32 8E-37 222.7 29.7 228 37-275 108-346 (420)
113 3bws_A Protein LP49; two-domai 100.0 5E-32 1.7E-36 221.5 31.0 235 29-275 164-425 (433)
114 3jro_A Fusion protein of prote 100.0 2.8E-33 9.6E-38 243.3 24.8 212 23-237 42-285 (753)
115 2w18_A PALB2, fancn, partner a 100.0 4.2E-32 1.4E-36 209.2 28.1 248 22-275 23-350 (356)
116 3lrv_A PRE-mRNA-splicing facto 100.0 3.6E-33 1.2E-37 221.7 21.2 228 34-275 76-326 (343)
117 4a11_B DNA excision repair pro 100.0 6E-32 2E-36 218.9 28.0 211 31-245 96-373 (408)
118 2xyi_A Probable histone-bindin 100.0 6E-32 2E-36 221.0 26.3 212 24-238 171-411 (430)
119 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-31 7.1E-36 208.4 26.8 207 24-245 94-304 (313)
120 2w18_A PALB2, fancn, partner a 100.0 4.4E-32 1.5E-36 209.1 21.9 193 36-235 113-355 (356)
121 4ggc_A P55CDC, cell division c 100.0 7.8E-31 2.7E-35 205.7 29.4 228 37-275 28-266 (318)
122 3bws_A Protein LP49; two-domai 100.0 3E-31 1E-35 216.9 26.3 235 25-272 114-365 (433)
123 4gq1_A NUP37; propeller, trans 100.0 6.2E-32 2.1E-36 218.3 20.4 203 25-235 127-387 (393)
124 3vu4_A KMHSV2; beta-propeller 100.0 2.4E-30 8.1E-35 206.3 27.9 225 35-275 59-329 (355)
125 3mmy_A MRNA export factor; mRN 100.0 1.4E-30 4.7E-35 208.0 20.6 203 26-236 78-345 (368)
126 1l0q_A Surface layer protein; 100.0 8.3E-29 2.8E-33 199.8 29.5 211 47-271 3-219 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.4E-28 4.7E-33 199.9 29.4 227 26-264 170-410 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 4.8E-29 1.6E-33 202.6 22.6 234 28-273 111-375 (415)
129 2ojh_A Uncharacterized protein 100.0 2.7E-28 9.1E-33 189.0 22.4 237 29-273 36-293 (297)
130 2ecf_A Dipeptidyl peptidase IV 100.0 4E-27 1.4E-31 204.7 24.6 232 34-275 36-360 (741)
131 1nir_A Nitrite reductase; hemo 100.0 7.7E-26 2.6E-30 189.3 29.4 238 23-270 168-439 (543)
132 1ri6_A Putative isomerase YBHE 100.0 7.2E-26 2.4E-30 179.2 27.1 235 32-274 35-300 (343)
133 3vgz_A Uncharacterized protein 100.0 2.2E-25 7.4E-30 177.2 29.7 228 35-273 89-335 (353)
134 3hfq_A Uncharacterized protein 100.0 1.3E-25 4.6E-30 178.3 27.7 235 32-272 37-306 (347)
135 3u4y_A Uncharacterized protein 100.0 2.1E-25 7.1E-30 175.9 27.7 242 25-273 31-294 (331)
136 3u4y_A Uncharacterized protein 99.9 4.8E-25 1.6E-29 173.8 27.1 224 41-271 4-240 (331)
137 3vgz_A Uncharacterized protein 99.9 8.5E-25 2.9E-29 173.8 28.7 232 34-275 40-296 (353)
138 1pby_B Quinohemoprotein amine 99.9 1.8E-25 6E-30 176.5 23.4 228 36-275 35-303 (337)
139 1nir_A Nitrite reductase; hemo 99.9 1.3E-24 4.4E-29 181.9 27.7 226 41-275 144-395 (543)
140 1jmx_B Amine dehydrogenase; ox 99.9 9.8E-25 3.3E-29 173.1 24.6 225 39-275 4-318 (349)
141 3o4h_A Acylamino-acid-releasin 99.9 2.4E-25 8.4E-30 188.5 21.8 230 34-275 21-269 (582)
142 2ojh_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 168.5 23.6 211 51-272 17-237 (297)
143 1xfd_A DIP, dipeptidyl aminope 99.9 4.9E-26 1.7E-30 197.4 17.0 229 36-273 18-329 (723)
144 2z3z_A Dipeptidyl aminopeptida 99.9 2.6E-24 8.9E-29 186.2 26.8 235 29-272 115-421 (706)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-24 3.5E-29 177.9 21.2 234 33-273 35-323 (434)
146 2ecf_A Dipeptidyl peptidase IV 99.9 6.5E-25 2.2E-29 190.9 21.1 224 36-273 110-402 (741)
147 2z3z_A Dipeptidyl aminopeptida 99.9 1.5E-24 5.3E-29 187.6 23.1 226 35-272 82-376 (706)
148 3scy_A Hypothetical bacterial 99.9 3.2E-23 1.1E-27 165.5 28.4 231 33-271 48-325 (361)
149 1k32_A Tricorn protease; prote 99.9 4.3E-24 1.5E-28 192.0 24.9 229 29-274 240-494 (1045)
150 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-24 1E-28 186.2 21.8 237 25-272 48-380 (723)
151 1ri6_A Putative isomerase YBHE 99.9 1.8E-22 6.3E-27 159.5 28.0 229 26-264 76-335 (343)
152 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.9E-23 1.7E-27 164.7 24.4 239 33-275 38-334 (365)
153 2oit_A Nucleoporin 214KDA; NH2 99.9 2.1E-23 7.3E-28 170.1 21.3 200 32-235 90-331 (434)
154 1k32_A Tricorn protease; prote 99.9 2.1E-23 7.3E-28 187.4 22.4 229 28-273 197-442 (1045)
155 1pby_B Quinohemoprotein amine 99.9 2.9E-22 9.9E-27 158.0 22.6 213 47-269 2-258 (337)
156 1z68_A Fibroblast activation p 99.9 2.2E-23 7.6E-28 180.7 16.1 230 39-273 20-335 (719)
157 4a5s_A Dipeptidyl peptidase 4 99.9 3E-22 1E-26 174.0 21.6 224 36-270 18-338 (740)
158 3hfq_A Uncharacterized protein 99.9 1.5E-20 5E-25 149.2 29.1 214 25-242 76-324 (347)
159 1jmx_B Amine dehydrogenase; ox 99.9 2.4E-21 8.1E-26 153.6 23.6 209 25-246 32-334 (349)
160 3o4h_A Acylamino-acid-releasin 99.9 3.1E-22 1.1E-26 169.5 19.2 224 28-273 57-303 (582)
161 3fvz_A Peptidyl-glycine alpha- 99.9 1.8E-20 6.2E-25 147.7 27.9 236 34-275 23-315 (329)
162 3scy_A Hypothetical bacterial 99.9 1.1E-19 3.6E-24 145.1 30.7 229 25-260 90-360 (361)
163 2dg1_A DRP35, lactonase; beta 99.9 2.2E-19 7.6E-24 141.6 31.0 241 27-272 37-300 (333)
164 3pe7_A Oligogalacturonate lyas 99.9 2E-21 7E-26 156.4 18.9 237 25-270 21-308 (388)
165 1z68_A Fibroblast activation p 99.9 1.2E-21 4.1E-26 169.9 17.3 225 36-272 61-376 (719)
166 3e5z_A Putative gluconolactona 99.9 1.1E-19 3.9E-24 141.0 26.5 234 26-274 19-279 (296)
167 3pe7_A Oligogalacturonate lyas 99.9 2.9E-21 9.8E-26 155.5 18.0 237 28-271 74-370 (388)
168 1q7f_A NHL, brain tumor CG1071 99.9 3.6E-19 1.2E-23 137.4 28.7 234 31-275 26-273 (286)
169 2oiz_A Aromatic amine dehydrog 99.9 3.2E-19 1.1E-23 142.2 26.5 227 23-264 40-360 (361)
170 2xdw_A Prolyl endopeptidase; a 99.9 6.7E-19 2.3E-23 152.4 29.2 233 32-269 122-397 (710)
171 3azo_A Aminopeptidase; POP fam 99.9 8.1E-20 2.8E-24 157.0 21.2 239 29-274 18-315 (662)
172 2oiz_A Aromatic amine dehydrog 99.9 5.6E-19 1.9E-23 140.7 23.9 223 45-275 14-327 (361)
173 3c5m_A Oligogalacturonate lyas 99.8 3.8E-20 1.3E-24 149.2 16.3 220 37-270 38-301 (396)
174 2gop_A Trilobed protease; beta 99.8 2.2E-18 7.6E-23 136.6 25.8 218 35-274 59-322 (347)
175 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.3E-18 8E-23 137.5 23.0 198 37-238 85-342 (365)
176 3azo_A Aminopeptidase; POP fam 99.8 1.9E-18 6.6E-23 148.5 23.9 231 28-271 61-356 (662)
177 1rwi_B Serine/threonine-protei 99.8 8.8E-18 3E-22 128.4 25.0 229 36-275 25-257 (270)
178 3no2_A Uncharacterized protein 99.8 4E-17 1.4E-21 125.0 27.6 212 45-269 4-230 (276)
179 2bkl_A Prolyl endopeptidase; m 99.8 1.2E-18 4.1E-23 150.5 20.6 231 32-269 118-380 (695)
180 3c5m_A Oligogalacturonate lyas 99.8 2.5E-19 8.5E-24 144.4 15.4 222 39-272 85-371 (396)
181 4a5s_A Dipeptidyl peptidase 4 99.8 1.5E-18 5E-23 151.0 20.9 231 28-268 50-379 (740)
182 2gop_A Trilobed protease; beta 99.8 2.7E-17 9.1E-22 130.4 23.4 215 35-274 15-284 (347)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 3E-16 1E-20 122.5 28.1 232 31-271 14-287 (314)
184 3g4e_A Regucalcin; six bladed 99.8 1.1E-15 3.7E-20 118.6 29.8 231 30-271 8-261 (297)
185 2dg1_A DRP35, lactonase; beta 99.8 2E-17 6.9E-22 130.4 20.1 227 35-273 6-254 (333)
186 3dsm_A Uncharacterized protein 99.8 7.2E-16 2.5E-20 121.3 27.0 222 35-269 44-285 (328)
187 1q7f_A NHL, brain tumor CG1071 99.8 4.9E-16 1.7E-20 119.8 24.4 196 33-238 75-281 (286)
188 2z2n_A Virginiamycin B lyase; 99.8 8.5E-15 2.9E-19 113.3 30.6 231 30-273 10-246 (299)
189 1yr2_A Prolyl oligopeptidase; 99.8 4.8E-16 1.6E-20 135.2 25.3 228 33-268 161-423 (741)
190 3dsm_A Uncharacterized protein 99.8 1.8E-15 6.1E-20 119.0 25.5 223 24-259 74-319 (328)
191 3hrp_A Uncharacterized protein 99.7 7.7E-15 2.6E-19 118.7 29.1 231 35-274 131-402 (409)
192 2mad_H Methylamine dehydrogena 99.7 1.1E-14 3.8E-19 116.2 29.4 239 24-275 57-343 (373)
193 2ghs_A AGR_C_1268P; regucalcin 99.7 4.6E-14 1.6E-18 110.9 32.3 223 36-271 50-291 (326)
194 3fvz_A Peptidyl-glycine alpha- 99.7 5E-16 1.7E-20 122.2 20.7 196 32-236 88-321 (329)
195 3sjl_D Methylamine dehydrogena 99.7 9.2E-16 3.1E-20 121.3 21.9 243 23-275 68-356 (386)
196 1qks_A Cytochrome CD1 nitrite 99.7 1.2E-14 4.2E-19 121.7 29.9 237 25-270 188-458 (567)
197 2z2n_A Virginiamycin B lyase; 99.7 2.8E-14 9.5E-19 110.4 29.9 227 33-274 55-288 (299)
198 3dr2_A Exported gluconolactona 99.7 7.7E-15 2.6E-19 114.2 26.5 235 26-274 36-299 (305)
199 1qks_A Cytochrome CD1 nitrite 99.7 1E-14 3.5E-19 122.1 28.4 223 44-275 165-414 (567)
200 3e5z_A Putative gluconolactona 99.7 9.6E-15 3.3E-19 113.2 24.8 187 69-269 20-235 (296)
201 1rwi_B Serine/threonine-protei 99.7 3E-15 1E-19 114.3 20.4 198 34-240 66-267 (270)
202 2qc5_A Streptogramin B lactona 99.7 3E-13 1E-17 104.6 29.4 229 32-273 17-251 (300)
203 3c75_H MADH, methylamine dehyd 99.7 1E-14 3.4E-19 117.3 20.4 226 44-275 82-395 (426)
204 2xdw_A Prolyl endopeptidase; a 99.7 4.6E-14 1.6E-18 122.2 25.6 224 44-274 81-358 (710)
205 1xip_A Nucleoporin NUP159; bet 99.7 4E-15 1.4E-19 118.1 17.2 175 36-223 39-230 (388)
206 1xip_A Nucleoporin NUP159; bet 99.7 5E-15 1.7E-19 117.5 17.6 172 78-268 39-230 (388)
207 3no2_A Uncharacterized protein 99.7 1.4E-13 4.8E-18 105.3 24.8 222 24-257 25-271 (276)
208 2qc5_A Streptogramin B lactona 99.7 1E-12 3.5E-17 101.6 29.2 225 33-270 60-290 (300)
209 2qe8_A Uncharacterized protein 99.7 1.2E-13 4.1E-18 109.3 24.2 243 24-272 9-311 (343)
210 3iuj_A Prolyl endopeptidase; h 99.7 4.9E-14 1.7E-18 121.7 23.4 230 32-270 126-389 (693)
211 2ece_A 462AA long hypothetical 99.6 5.1E-13 1.7E-17 106.6 26.1 226 44-270 93-399 (462)
212 2bkl_A Prolyl endopeptidase; m 99.6 6.5E-14 2.2E-18 121.0 21.8 221 43-274 76-341 (695)
213 3c75_H MADH, methylamine dehyd 99.6 1.8E-12 6.2E-17 104.3 23.4 214 23-244 108-409 (426)
214 2hz6_A Endoplasmic reticulum t 99.6 4E-15 1.4E-19 118.8 7.9 203 45-265 8-217 (369)
215 1mda_H Methylamine dehydrogena 99.6 2.2E-13 7.5E-18 107.8 17.7 210 57-276 47-340 (368)
216 3sjl_D Methylamine dehydrogena 99.5 1.4E-11 4.8E-16 97.5 25.6 210 37-262 139-384 (386)
217 1yr2_A Prolyl oligopeptidase; 99.5 2.4E-12 8.3E-17 112.0 23.1 223 43-274 115-385 (741)
218 1fwx_A Nitrous oxide reductase 99.5 3.3E-12 1.1E-16 105.3 20.7 222 45-270 100-406 (595)
219 1mda_H Methylamine dehydrogena 99.5 2.1E-12 7.3E-17 102.2 18.6 224 22-261 54-366 (368)
220 2mad_H Methylamine dehydrogena 99.5 3.4E-11 1.2E-15 96.1 25.6 225 41-271 27-286 (373)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.8E-11 6.1E-16 95.3 23.6 194 33-237 69-299 (314)
222 3g4e_A Regucalcin; six bladed 99.5 3.1E-11 1.1E-15 93.4 22.7 188 33-226 52-261 (297)
223 3hrp_A Uncharacterized protein 99.5 4.1E-11 1.4E-15 96.9 24.2 183 78-270 132-341 (409)
224 1npe_A Nidogen, entactin; glyc 99.5 2.8E-10 9.6E-15 86.6 26.7 219 35-264 36-263 (267)
225 3hxj_A Pyrrolo-quinoline quino 99.4 6.9E-11 2.4E-15 92.7 22.3 209 46-275 107-317 (330)
226 3dr2_A Exported gluconolactona 99.4 1.2E-10 4E-15 90.5 23.3 191 69-273 37-259 (305)
227 2fp8_A Strictosidine synthase; 99.4 1.1E-09 3.8E-14 85.7 28.4 229 35-273 19-304 (322)
228 1kb0_A Quinohemoprotein alcoho 99.4 6.5E-11 2.2E-15 101.7 22.6 215 47-268 175-536 (677)
229 2ece_A 462AA long hypothetical 99.4 5.4E-10 1.9E-14 89.3 25.6 188 37-225 140-399 (462)
230 2qe8_A Uncharacterized protein 99.4 1.9E-10 6.5E-15 90.9 22.9 200 32-234 64-318 (343)
231 1yiq_A Quinohemoprotein alcoho 99.4 2.5E-10 8.5E-15 98.3 24.2 205 55-269 182-536 (689)
232 2iwa_A Glutamine cyclotransfer 99.4 3.9E-10 1.3E-14 84.7 22.3 205 24-238 9-238 (266)
233 3nol_A Glutamine cyclotransfer 99.4 3.3E-10 1.1E-14 84.2 21.5 196 68-271 33-244 (262)
234 2iwa_A Glutamine cyclotransfer 99.4 6E-10 2.1E-14 83.7 22.7 199 67-270 10-224 (266)
235 2p4o_A Hypothetical protein; p 99.4 8.6E-09 2.9E-13 80.0 29.4 237 25-273 23-279 (306)
236 2ghs_A AGR_C_1268P; regucalcin 99.4 7.5E-10 2.6E-14 86.8 23.3 184 34-227 89-292 (326)
237 3nol_A Glutamine cyclotransfer 99.3 7.4E-10 2.5E-14 82.3 20.8 192 24-226 31-244 (262)
238 3nok_A Glutaminyl cyclase; bet 99.3 3.2E-09 1.1E-13 78.9 21.1 181 79-270 57-253 (268)
239 3mbr_X Glutamine cyclotransfer 99.3 7.4E-09 2.5E-13 76.3 22.8 197 67-271 10-223 (243)
240 3hxj_A Pyrrolo-quinoline quino 99.3 4.1E-10 1.4E-14 88.2 17.5 213 35-272 60-274 (330)
241 1npe_A Nidogen, entactin; glyc 99.3 4.6E-08 1.6E-12 74.3 28.1 211 47-270 2-225 (267)
242 3nok_A Glutaminyl cyclase; bet 99.3 1.4E-09 4.7E-14 80.9 18.6 189 25-225 44-253 (268)
243 3q7m_A Lipoprotein YFGL, BAMB; 99.3 2.8E-09 9.7E-14 85.2 21.7 212 47-275 144-371 (376)
244 1kb0_A Quinohemoprotein alcoho 99.3 7.5E-10 2.6E-14 95.1 19.3 221 46-275 128-500 (677)
245 1fwx_A Nitrous oxide reductase 99.2 6.1E-09 2.1E-13 86.2 23.3 216 49-273 18-352 (595)
246 3iuj_A Prolyl endopeptidase; h 99.2 1.7E-09 5.9E-14 93.4 20.8 197 38-240 178-408 (693)
247 2hz6_A Endoplasmic reticulum t 99.2 2.6E-12 9E-17 102.5 3.0 146 87-245 8-157 (369)
248 1yiq_A Quinohemoprotein alcoho 99.2 1.9E-09 6.7E-14 92.7 19.1 226 46-275 121-498 (689)
249 3q7m_A Lipoprotein YFGL, BAMB; 99.2 2.2E-08 7.5E-13 80.0 23.7 190 45-245 52-266 (376)
250 3mbr_X Glutamine cyclotransfer 99.2 2.2E-08 7.4E-13 73.8 21.5 192 24-226 9-223 (243)
251 1kv9_A Type II quinohemoprotei 99.1 7.9E-08 2.7E-12 82.6 24.0 206 55-270 177-520 (668)
252 3v64_C Agrin; beta propeller, 99.1 7.2E-07 2.5E-11 70.5 27.3 204 35-245 73-283 (349)
253 3v65_B Low-density lipoprotein 99.1 4.2E-07 1.4E-11 72.8 26.2 205 34-245 115-326 (386)
254 3v64_C Agrin; beta propeller, 99.0 1.3E-06 4.5E-11 69.0 27.7 213 35-259 34-253 (349)
255 3qqz_A Putative uncharacterize 99.0 1.1E-06 3.7E-11 65.7 25.4 199 29-235 21-251 (255)
256 3tc9_A Hypothetical hydrolase; 99.0 6E-07 2.1E-11 73.0 26.0 230 36-269 138-417 (430)
257 2ad6_A Methanol dehydrogenase 99.0 1.6E-07 5.6E-12 79.1 23.1 213 47-267 161-522 (571)
258 1ijq_A LDL receptor, low-densi 99.0 2.9E-06 9.8E-11 66.1 28.7 207 34-245 29-246 (316)
259 4hw6_A Hypothetical protein, I 99.0 1.3E-06 4.4E-11 71.1 27.2 231 36-270 140-421 (433)
260 2xe4_A Oligopeptidase B; hydro 99.0 2E-07 6.9E-12 81.2 23.9 196 36-235 175-398 (751)
261 3p5b_L Low density lipoprotein 99.0 5.4E-06 1.8E-10 66.7 30.1 208 33-245 110-328 (400)
262 4a2l_A BT_4663, two-component 99.0 1.9E-06 6.6E-11 75.7 29.1 228 34-273 356-606 (795)
263 3v65_B Low-density lipoprotein 99.0 2.2E-06 7.5E-11 68.7 26.1 210 38-259 80-296 (386)
264 1w6s_A Methanol dehydrogenase 98.9 4.9E-07 1.7E-11 76.3 22.9 208 55-269 181-534 (599)
265 1kv9_A Type II quinohemoprotei 98.9 8.3E-08 2.8E-12 82.4 18.3 224 46-275 117-481 (668)
266 1k3i_A Galactose oxidase precu 98.9 8.9E-07 3.1E-11 76.0 24.8 227 39-271 190-530 (656)
267 3qqz_A Putative uncharacterize 98.9 3.1E-06 1.1E-10 63.2 24.4 193 73-269 23-241 (255)
268 1flg_A Protein (quinoprotein e 98.9 4.8E-07 1.6E-11 76.3 22.3 160 101-268 291-546 (582)
269 4a2l_A BT_4663, two-component 98.9 6.3E-06 2.2E-10 72.4 30.1 229 34-273 214-472 (795)
270 3sov_A LRP-6, low-density lipo 98.9 7.5E-06 2.6E-10 63.7 26.3 204 35-245 35-246 (318)
271 2fp8_A Strictosidine synthase; 98.9 1.6E-06 5.5E-11 67.6 22.2 178 78-269 20-246 (322)
272 1ijq_A LDL receptor, low-densi 98.9 1.2E-05 4.2E-10 62.5 26.9 211 48-268 3-224 (316)
273 2xbg_A YCF48-like protein; pho 98.8 7.6E-06 2.6E-10 64.0 24.5 229 34-275 79-315 (327)
274 2ism_A Putative oxidoreductase 98.8 2E-05 6.9E-10 62.3 27.8 227 34-270 30-333 (352)
275 3v9f_A Two-component system se 98.8 2.1E-05 7.2E-10 69.0 29.1 231 34-274 312-560 (781)
276 3m0c_C LDL receptor, low-densi 98.8 2.4E-05 8.4E-10 68.1 28.9 207 34-245 423-640 (791)
277 2ad6_A Methanol dehydrogenase 98.8 9.9E-07 3.4E-11 74.3 19.5 147 46-194 115-338 (571)
278 3amr_A 3-phytase; beta-propell 98.8 1.8E-05 6.2E-10 61.5 24.0 197 45-245 39-272 (355)
279 3p5b_L Low density lipoprotein 98.8 3.8E-05 1.3E-09 61.8 28.7 203 48-259 85-298 (400)
280 1n7d_A LDL receptor, low-densi 98.8 2.6E-07 8.7E-12 79.7 15.3 206 35-245 406-622 (699)
281 1w6s_A Methanol dehydrogenase 98.8 6.4E-06 2.2E-10 69.6 23.2 193 46-245 62-350 (599)
282 3v9f_A Two-component system se 98.7 1.6E-05 5.5E-10 69.7 26.1 229 34-273 257-516 (781)
283 3sov_A LRP-6, low-density lipo 98.7 4.4E-05 1.5E-09 59.4 26.0 204 48-261 6-218 (318)
284 3kya_A Putative phosphatase; s 98.6 6.5E-05 2.2E-09 61.6 24.9 232 36-270 140-463 (496)
285 1flg_A Protein (quinoprotein e 98.6 1.5E-05 5.3E-10 67.2 21.7 148 46-193 117-357 (582)
286 4a0p_A LRP6, LRP-6, low-densit 98.6 0.00012 4E-09 62.4 27.1 203 35-245 37-245 (628)
287 3a9g_A Putative uncharacterize 98.6 0.00012 4E-09 57.9 28.5 235 34-270 28-330 (354)
288 3sre_A PON1, serum paraoxonase 98.6 4.9E-05 1.7E-09 59.7 22.2 194 36-234 51-295 (355)
289 2xe4_A Oligopeptidase B; hydro 98.6 6.3E-06 2.1E-10 71.9 18.7 189 78-273 175-389 (751)
290 2p4o_A Hypothetical protein; p 98.6 9.3E-05 3.2E-09 57.2 23.5 186 35-228 72-279 (306)
291 2xzh_A Clathrin heavy chain 1; 98.6 0.00012 4E-09 56.1 26.6 199 39-245 71-298 (365)
292 2g8s_A Glucose/sorbosone dehyd 98.6 0.0001 3.5E-09 58.2 23.5 233 35-269 18-340 (353)
293 3m0c_C LDL receptor, low-densi 98.5 0.00017 5.9E-09 62.9 25.8 204 48-260 397-611 (791)
294 2p9w_A MAL S 1 allergenic prot 98.5 0.00018 6.3E-09 55.4 23.5 206 32-237 10-265 (334)
295 3s94_A LRP-6, low-density lipo 98.5 0.00016 5.3E-09 61.6 24.4 205 34-245 39-251 (619)
296 1n7d_A LDL receptor, low-densi 98.4 7.3E-06 2.5E-10 70.7 15.6 176 55-237 385-571 (699)
297 3tc9_A Hypothetical hydrolase; 98.4 5.2E-05 1.8E-09 61.6 19.7 151 78-236 138-300 (430)
298 2xbg_A YCF48-like protein; pho 98.4 0.00038 1.3E-08 54.3 27.1 223 34-270 35-268 (327)
299 4hw6_A Hypothetical protein, I 98.4 0.00018 6.3E-09 58.4 21.2 196 34-236 181-432 (433)
300 3s94_A LRP-6, low-density lipo 98.4 0.00059 2E-08 58.1 24.8 200 54-262 16-224 (619)
301 2p9w_A MAL S 1 allergenic prot 98.4 0.00011 3.6E-09 56.7 18.3 155 78-237 14-215 (334)
302 1bpo_A Protein (clathrin); cla 98.4 0.00057 1.9E-08 54.5 26.7 210 39-259 70-308 (494)
303 2vpj_A Kelch-like protein 12; 98.3 0.00075 2.6E-08 51.8 21.9 220 45-273 14-264 (301)
304 3amr_A 3-phytase; beta-propell 98.2 0.00095 3.2E-08 52.0 21.1 175 87-270 39-250 (355)
305 1k3i_A Galactose oxidase precu 98.2 0.00038 1.3E-08 59.8 21.1 112 81-192 190-324 (656)
306 3sre_A PON1, serum paraoxonase 98.2 0.00034 1.1E-08 55.0 18.8 162 100-272 82-287 (355)
307 3ii7_A Kelch-like protein 7; p 98.2 0.001 3.6E-08 51.2 21.5 218 47-273 13-258 (306)
308 3pbp_A Nucleoporin NUP82; beta 98.2 0.00051 1.7E-08 54.7 18.6 143 130-273 29-203 (452)
309 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0025 8.7E-08 54.3 28.7 202 35-244 340-556 (628)
310 3das_A Putative oxidoreductase 98.1 0.0018 6E-08 50.7 28.5 240 28-270 25-326 (347)
311 2vpj_A Kelch-like protein 12; 98.1 0.0015 5.2E-08 50.1 20.5 188 45-240 62-281 (301)
312 3pbp_A Nucleoporin NUP82; beta 98.1 0.00055 1.9E-08 54.5 17.7 145 84-233 28-208 (452)
313 3kya_A Putative phosphatase; s 98.1 0.0013 4.4E-08 54.0 20.5 154 79-235 141-339 (496)
314 3ii7_A Kelch-like protein 7; p 98.1 0.0012 4.1E-08 50.8 19.6 190 45-241 55-276 (306)
315 1zgk_A Kelch-like ECH-associat 98.1 0.0014 4.9E-08 50.5 19.9 219 45-273 24-273 (308)
316 2xn4_A Kelch-like protein 2; s 98.0 0.0022 7.4E-08 49.3 22.1 218 46-273 16-262 (302)
317 2xn4_A Kelch-like protein 2; s 98.0 0.0021 7.1E-08 49.4 19.6 191 45-241 61-280 (302)
318 1tl2_A L10, protein (tachylect 97.8 0.0012 4E-08 47.7 14.0 173 45-229 3-202 (236)
319 1tl2_A L10, protein (tachylect 97.8 0.00077 2.6E-08 48.7 12.0 142 122-269 41-199 (236)
320 1zgk_A Kelch-like ECH-associat 97.8 0.008 2.7E-07 46.3 19.6 189 45-242 70-292 (308)
321 4asc_A Kelch repeat and BTB do 97.7 0.0088 3E-07 46.2 20.2 214 48-272 7-253 (315)
322 2be1_A Serine/threonine-protei 97.7 0.00091 3.1E-08 52.1 12.8 191 47-242 11-236 (339)
323 2uvk_A YJHT; unknown function, 97.7 0.0041 1.4E-07 49.0 16.6 222 45-273 19-327 (357)
324 1xi4_A Clathrin heavy chain; a 97.7 0.0037 1.3E-07 57.3 17.3 198 40-245 71-297 (1630)
325 3ott_A Two-component system se 97.7 0.026 8.8E-07 49.4 24.6 221 34-273 21-252 (758)
326 1cru_A Protein (soluble quinop 97.6 0.011 3.7E-07 48.3 18.8 104 122-225 27-162 (454)
327 2zwa_A Leucine carboxyl methyl 97.6 0.03 1E-06 48.5 22.4 226 44-271 396-674 (695)
328 3a9g_A Putative uncharacterize 97.6 0.0044 1.5E-07 48.9 15.2 141 122-268 29-214 (354)
329 1cru_A Protein (soluble quinop 97.5 0.026 8.7E-07 46.1 28.3 107 34-140 26-162 (454)
330 2ism_A Putative oxidoreductase 97.5 0.0048 1.6E-07 48.6 14.8 100 122-224 31-152 (352)
331 3s25_A Hypothetical 7-bladed b 97.5 0.02 7E-07 43.9 17.6 197 44-269 23-240 (302)
332 3ei3_A DNA damage-binding prot 97.5 0.067 2.3E-06 49.0 23.7 164 102-274 808-991 (1158)
333 3das_A Putative oxidoreductase 97.4 0.03 1E-06 43.8 19.0 144 121-268 31-218 (347)
334 4asc_A Kelch repeat and BTB do 97.3 0.033 1.1E-06 42.9 20.1 192 43-243 43-283 (315)
335 2woz_A Kelch repeat and BTB do 97.3 0.041 1.4E-06 42.4 20.0 214 48-273 18-264 (318)
336 2g8s_A Glucose/sorbosone dehyd 97.2 0.036 1.2E-06 43.6 16.2 141 123-268 19-214 (353)
337 2uvk_A YJHT; unknown function, 97.1 0.064 2.2E-06 42.1 17.5 196 45-245 65-350 (357)
338 2woz_A Kelch repeat and BTB do 97.0 0.071 2.4E-06 41.1 19.0 192 43-243 54-293 (318)
339 3sbq_A Nitrous-oxide reductase 96.9 0.15 5E-06 42.4 23.3 221 45-270 141-453 (638)
340 3s25_A Hypothetical 7-bladed b 96.8 0.11 3.8E-06 39.8 22.5 176 40-237 58-255 (302)
341 3ei3_A DNA damage-binding prot 96.7 0.35 1.2E-05 44.5 29.1 227 34-270 553-851 (1158)
342 3ott_A Two-component system se 96.7 0.29 1E-05 42.8 31.4 221 36-269 192-436 (758)
343 4hvt_A Ritya.17583.B, post-pro 96.2 0.57 1.9E-05 40.6 21.9 223 38-266 132-410 (711)
344 3sbq_A Nitrous-oxide reductase 95.9 0.21 7.1E-06 41.6 12.7 73 78-153 324-409 (638)
345 2wg3_C Hedgehog-interacting pr 95.6 0.73 2.5E-05 37.7 26.0 107 35-141 14-158 (463)
346 2be1_A Serine/threonine-protei 95.2 0.31 1.1E-05 37.9 11.0 103 89-194 11-133 (339)
347 2xzh_A Clathrin heavy chain 1; 95.2 0.82 2.8E-05 35.4 21.8 197 35-238 107-333 (365)
348 2zwa_A Leucine carboxyl methyl 95.1 1.5 5.1E-05 38.0 19.3 184 86-273 396-618 (695)
349 2wg3_C Hedgehog-interacting pr 94.5 1.7 5.6E-05 35.6 14.4 22 252-273 139-160 (463)
350 1xi4_A Clathrin heavy chain; a 94.3 2.3 7.8E-05 40.0 15.4 129 55-193 47-190 (1630)
351 1bpo_A Protein (clathrin); cla 93.7 2.3 8E-05 34.4 23.5 196 36-238 107-332 (494)
352 3qhy_B Beta-lactamase inhibito 92.0 3.1 0.00011 31.4 17.0 180 36-236 25-206 (282)
353 3q6k_A 43.2 kDa salivary prote 91.6 4.2 0.00014 32.2 23.3 211 34-269 86-341 (381)
354 3zwu_A Alkaline phosphatase PH 90.9 1.4 4.8E-05 37.2 9.0 59 209-269 478-548 (592)
355 4gq2_M Nucleoporin NUP120; bet 90.3 2.3 7.7E-05 38.4 10.3 39 35-73 236-274 (950)
356 4a9v_A PHOX; hydrolase, beta-p 89.9 2.5 8.5E-05 35.5 9.4 62 207-270 476-549 (592)
357 4gq2_M Nucleoporin NUP120; bet 89.5 3.1 0.00011 37.5 10.6 69 123-191 237-317 (950)
358 3b7f_A Glycosyl hydrolase, BNR 88.3 8.1 0.00028 30.5 22.4 110 34-148 54-204 (394)
359 3f7f_A Nucleoporin NUP120; nuc 87.2 14 0.00048 32.0 14.2 69 123-193 223-307 (729)
360 4fhn_B Nucleoporin NUP120; pro 80.9 1.8 6.1E-05 39.9 4.9 38 36-73 239-276 (1139)
361 4fhn_B Nucleoporin NUP120; pro 79.4 2.4 8E-05 39.1 5.1 38 208-245 239-276 (1139)
362 3f7f_A Nucleoporin NUP120; nuc 79.3 4.6 0.00016 34.9 6.4 37 36-74 223-259 (729)
363 3no0_A DNA gyrase subunit A; D 76.0 22 0.00076 26.6 16.9 154 78-236 25-195 (276)
364 3qhy_B Beta-lactamase inhibito 73.2 27 0.00091 26.2 17.1 205 36-268 64-270 (282)
365 3zwu_A Alkaline phosphatase PH 72.7 17 0.00057 30.8 8.0 60 36-95 477-549 (592)
366 3no0_A DNA gyrase subunit A; D 72.2 28 0.00097 26.0 19.7 195 35-236 24-245 (276)
367 4a9v_A PHOX; hydrolase, beta-p 70.2 31 0.0011 29.1 8.9 62 35-96 476-550 (592)
368 3uc1_A DNA gyrase subunit A; D 67.8 40 0.0014 26.0 19.8 152 35-191 95-279 (327)
369 3uc1_A DNA gyrase subunit A; D 65.7 44 0.0015 25.8 22.9 233 36-274 43-322 (327)
370 3b7f_A Glycosyl hydrolase, BNR 62.1 55 0.0019 25.6 23.0 206 47-261 23-287 (394)
371 1wp5_A Topoisomerase IV; broke 60.2 56 0.0019 25.1 23.4 188 44-237 3-225 (323)
372 1suu_A DNA gyrase subunit A; t 58.7 58 0.002 24.8 26.0 187 44-236 6-230 (312)
373 3q6k_A 43.2 kDa salivary prote 58.2 68 0.0023 25.4 15.1 114 34-152 151-306 (381)
374 1sqj_A OXG-RCBH, oligoxylogluc 58.0 99 0.0034 27.2 23.6 61 34-95 14-83 (789)
375 1suu_A DNA gyrase subunit A; t 50.0 83 0.0028 24.0 20.0 182 86-274 6-223 (312)
376 1q47_A Semaphorin 3A; beta pro 49.9 71 0.0024 26.4 7.7 28 205-232 460-487 (495)
377 3l6v_A GYRA, DNA gyrase subuni 47.8 1E+02 0.0034 24.3 19.5 147 85-236 4-179 (370)
378 3al9_A Plexin-A2; beta-propell 45.0 48 0.0016 27.7 6.0 59 174-232 414-476 (539)
379 1q47_A Semaphorin 3A; beta pro 43.1 57 0.0019 26.9 6.1 54 220-274 423-484 (495)
380 4hvt_A Ritya.17583.B, post-pro 42.5 1.7E+02 0.0059 25.5 13.7 110 126-236 133-277 (711)
381 2cn3_A Xyloglucanase, beta-1,4 41.1 1.8E+02 0.0062 25.3 21.2 106 35-141 23-152 (737)
382 1olz_A Semaphorin 4D; developm 40.2 1E+02 0.0035 26.6 7.4 28 205-232 448-477 (663)
383 4gz8_A Semaphorin-3A; multi-do 39.9 1.1E+02 0.0038 26.4 7.5 30 203-232 466-495 (667)
384 1zi0_A DNA gyrase subunit A; b 38.0 1.3E+02 0.0045 22.8 25.0 187 44-236 1-225 (307)
385 3ol2_B Plexin-B1; beta-propell 37.8 1.4E+02 0.0047 24.9 7.6 57 175-232 402-461 (528)
386 4gz8_A Semaphorin-3A; multi-do 36.1 97 0.0033 26.7 6.6 55 220-275 431-493 (667)
387 3nvq_A Semaphorin-7A; beta-pro 35.4 1.2E+02 0.0042 25.7 7.0 28 205-232 417-444 (590)
388 1olz_A Semaphorin 4D; developm 35.1 1.4E+02 0.0049 25.7 7.5 54 220-274 417-474 (663)
389 3al9_A Plexin-A2; beta-propell 34.1 56 0.0019 27.3 4.8 65 209-274 402-473 (539)
390 3mez_B Mannose-specific lectin 32.9 90 0.0031 19.4 9.6 24 166-190 60-83 (113)
391 2zux_A YESW protein; beta-prop 31.9 2.4E+02 0.008 23.9 17.0 57 102-159 152-245 (591)
392 3nvq_A Semaphorin-7A; beta-pro 31.6 1.4E+02 0.0047 25.3 6.7 55 219-274 381-441 (590)
393 4h3o_A Lectin; cadmium, plant 30.9 94 0.0032 19.0 10.7 46 166-224 54-99 (105)
394 3l6v_A GYRA, DNA gyrase subuni 29.2 2.1E+02 0.0071 22.5 24.5 145 42-191 3-180 (370)
395 3mez_A Mannose-specific lectin 29.0 1.1E+02 0.0036 19.0 9.1 13 211-223 88-100 (111)
396 3mvd_K Regulator of chromosome 27.0 2.3E+02 0.008 22.4 22.5 105 37-151 77-206 (423)
397 1zvt_A Topoisomerase IV subuni 24.4 2.1E+02 0.0073 21.0 15.4 139 48-191 4-163 (256)
398 3l48_A Outer membrane usher pr 20.9 1.5E+02 0.005 17.9 4.2 31 211-241 26-56 (94)
399 3oky_A Plexin-A2; transmembran 20.4 2.1E+02 0.0073 24.8 6.0 55 220-275 414-473 (681)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-47 Score=298.28 Aligned_cols=243 Identities=18% Similarity=0.269 Sum_probs=218.0
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
++..+++++|.+.|++++|+|++++|++++.||+|++||+++++.+..+..|..+|.+++|+|+++.+++++. |+.|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i 79 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRI 79 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC---CCEE
Confidence 4567889999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCce-eeeeE--eecCCCeeEecC-CCcEEEEe
Q 023822 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK-CQGLL--RVQGRPAAAYDD-QGLVFAVA 179 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~--~~~~~~~~~~~~-~~~~l~~~ 179 (276)
++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++. ....+ +...+.+++|+| ++.+++++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 999999999999999999999999999999999999999999999999874 34444 556688999999 56777766
Q ss_pred e-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECC--CCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEE
Q 023822 180 F-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 256 (276)
+ |+.|++||++..... ......+...+..+.|+| ++++|++++.|+.|++||+++++++..+. +|...|..
T Consensus 160 s~D~~v~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~---~h~~~v~~ 233 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPN---FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---GHMSNVSF 233 (304)
T ss_dssp ETTSEEEEEETTCSSCS---EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEE
T ss_pred eCCCeEEEEECCCCCcc---ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC---CCCCCEEE
Confidence 6 999999999875531 222345667889999987 67899999999999999999999999998 79999999
Q ss_pred EEECCCCcEEEEecCCCCC
Q 023822 257 ASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 257 ~~~s~~g~~l~~~~~dg~v 275 (276)
++|+|++++|++|+.||+|
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i 252 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTL 252 (304)
T ss_dssp EEECSSSSEEEEEETTSCE
T ss_pred EEECCCCCEEEEEcCCCeE
Confidence 9999999999999999986
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-47 Score=299.08 Aligned_cols=241 Identities=15% Similarity=0.212 Sum_probs=224.7
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
.....+.+|...|.+++|++++.++++++.|++|++||+.+++.+..+..+...+.+++|+|+++++++++. ++.|+
T Consensus 71 ~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~---dg~v~ 147 (321)
T 3ow8_A 71 DLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH---VGKVN 147 (321)
T ss_dssp EEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT---TSEEE
T ss_pred eeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC---CCcEE
Confidence 445568999999999999999999999999999999999999999999988889999999999999999998 99999
Q ss_pred EEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-C
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-G 181 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d 181 (276)
+|++++++....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ +...+.+++|+|++.+|++++ |
T Consensus 148 i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 148 IFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp EEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTT
T ss_pred EEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC
Confidence 9999999999999999999999999999999999999999999999999988887 455688999999999988888 8
Q ss_pred CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECC
Q 023822 182 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 261 (276)
Q Consensus 182 ~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (276)
+.|++||++..+. ...+.+|...|.+++|+|++++|++++.|+.|++||+.+++++..+. +|...|.+++|+|
T Consensus 228 g~i~iwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 228 GYIKIYDVQHANL----AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF---DHQDQVWGVKYNG 300 (321)
T ss_dssp SCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECT
T ss_pred CeEEEEECCCcce----eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc---CCCCcEEEEEECC
Confidence 9999999987553 56677899999999999999999999999999999999999999998 7899999999999
Q ss_pred CCcEEEEecCCCCC
Q 023822 262 EGMFVISGRVSPFS 275 (276)
Q Consensus 262 ~g~~l~~~~~dg~v 275 (276)
+|++|++++.||+|
T Consensus 301 ~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 301 NGSKIVSVGDDQEI 314 (321)
T ss_dssp TSSEEEEEETTCCE
T ss_pred CCCEEEEEeCCCeE
Confidence 99999999999976
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-46 Score=305.02 Aligned_cols=239 Identities=18% Similarity=0.278 Sum_probs=222.3
Q ss_pred ceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
...+.+|.++|++++|+|++++|++|+.||+|++||+.+++....+.+|...|.+++|+|+++++++++. |+.|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA---DMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET---TSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC---CCeEEEE
Confidence 4567899999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-CCe
Q 023822 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGY 183 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~ 183 (276)
|+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++.++..+ +...+..+.++|++.++++++ |+.
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 99999999999999999999999999999999999999999999999988887 445577899999999888887 999
Q ss_pred EEEEecccCCCCCeeeeeecCCCCCceEEEECCC--------------------CcEEEEeecCCcEEEEECCCCcEEEE
Q 023822 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSND--------------------GRLMLLTTMEGHIHVLDSFRGTLLST 243 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~i~d~~~~~~~~~ 243 (276)
|++||+++.+. ...+..|...|.+++|+|+ |.+|++|+.|+.|++||+.+++++..
T Consensus 258 v~vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 258 VRVWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp EEEEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEECCCCce----eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 99999987654 5567788999999999996 67899999999999999999999999
Q ss_pred eecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 244 YNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 244 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+. +|...|.+++|+|+|++|++|+.||+|
T Consensus 334 ~~---~h~~~v~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 334 LV---GHDNWVRGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp EE---CCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred EE---CCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 98 799999999999999999999999975
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.2e-46 Score=295.21 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=210.2
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCC-----
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG----- 98 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----- 98 (276)
++...++++|.++|++++|+|++++|++++.||+|++||+.+++.+..+..|...|.+++|+|+++++++++.++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 455678999999999999999999999999999999999988888777777777777777777777666655410
Q ss_pred -------------------------------------CCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeC
Q 023822 99 -------------------------------------WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL 141 (276)
Q Consensus 99 -------------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 141 (276)
.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 1566666776667777778889999999999999999999999
Q ss_pred CCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC
Q 023822 142 DRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG 218 (276)
Q Consensus 142 d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 218 (276)
|+.|++||++++++...+ +...+.+++|+|++.++++++ |+.|++||++..+. ...+....+...+.+++|+|+|
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE--LMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTS
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE--EEEEccCCcccceEEEEECCCC
Confidence 999999999999888877 556688999999999888888 89999999987542 1222223344579999999999
Q ss_pred cEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 219 RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 219 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
++|++|+.||.|++||+.+++.+..+. +|...|.+++|+|+|++|++|+.||+|
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~---~h~~~v~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLA---GHDNRVSCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEee---cCCCcEEEEEEcCCCCEEEEEcCCccE
Confidence 999999999999999999999999998 799999999999999999999999986
No 5
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-46 Score=305.26 Aligned_cols=242 Identities=18% Similarity=0.314 Sum_probs=223.7
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
.+....+++|.+.|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|+++++++++. |+.|
T Consensus 140 ~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~---D~~i 216 (410)
T 1vyh_C 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR---DKTI 216 (410)
T ss_dssp CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET---TSEE
T ss_pred CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC---CCeE
Confidence 4556788999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCC---------
Q 023822 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQ--------- 172 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~--------- 172 (276)
++||+++++++..+.+|...|.++.|+|++++|++++.|+.|++||++++++...+ +...+.+++|+|+
T Consensus 217 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 296 (410)
T 1vyh_C 217 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 296 (410)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred EEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhh
Confidence 99999999999999999999999999999999999999999999999999888777 5556778999986
Q ss_pred -----------CcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE
Q 023822 173 -----------GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL 240 (276)
Q Consensus 173 -----------~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 240 (276)
+.++++++ |+.|++||++++.. ...+.+|...|.+++|+|+|++|++++.||.|++||+.++++
T Consensus 297 ~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~----~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 297 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC----LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred ccccccccCCCCCEEEEEeCCCeEEEEECCCCce----EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 55677666 99999999987654 566778999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 241 LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+..+. +|...|++++|+|++.+|++|+.||+|
T Consensus 373 ~~~~~---~h~~~v~~l~~~~~~~~l~sgs~D~~i 404 (410)
T 1vyh_C 373 MKTLN---AHEHFVTSLDFHKTAPYVVTGSVDQTV 404 (410)
T ss_dssp CEEEE---CCSSCEEEEEECSSSSCEEEEETTSEE
T ss_pred EEEEc---CCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99998 789999999999999999999999975
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=292.44 Aligned_cols=234 Identities=20% Similarity=0.250 Sum_probs=202.3
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeee----eeeeeeceEEEEEeccCCeEEEeccCCCCCceEE
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT----INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~ 105 (276)
...|...|.+++|+|++ .|++|+.||+|+|||+.+++.+.. ..+|...|.+++|+|++++|++++. |+.|++
T Consensus 78 ~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i~i 153 (344)
T 4gqb_B 78 GVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICIKV 153 (344)
T ss_dssp EEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEE
T ss_pred eeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeEEE
Confidence 34567889999999985 788999999999999998875544 3478899999999999999999998 999999
Q ss_pred EEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE----eecCCCeeEecCC-CcEEEEe
Q 023822 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL----RVQGRPAAAYDDQ-GLVFAVA 179 (276)
Q Consensus 106 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~-~~~l~~~ 179 (276)
||+++++.+..+.+|...|.+++|+|++. +|++++.|++|++||+++++....+ +...+.+++|+|+ +++++++
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 99999999999999999999999999885 7899999999999999998887766 2334668999985 5677776
Q ss_pred e-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC-cEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEE
Q 023822 180 F-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 257 (276)
+ |+.|++||+++++. +..+.+|...|++++|+|++ ++|++|+.|+.|+|||+.+++++. +. +|.+.|+++
T Consensus 234 ~~dg~v~~wd~~~~~~----~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~---~H~~~V~~v 305 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSC----VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQ---AHRDFVRDA 305 (344)
T ss_dssp ETTSEEEEEESCC--C----CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-EC---CCSSCEEEE
T ss_pred ccCCcEEEEECCCCcE----EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-Ec---CCCCCEEEE
Confidence 6 89999999998765 56677899999999999998 679999999999999999887654 44 699999999
Q ss_pred EECCCCc-EEEEecCCCCC
Q 023822 258 SFSPEGM-FVISGRVSPFS 275 (276)
Q Consensus 258 ~~s~~g~-~l~~~~~dg~v 275 (276)
+|+|+++ +|++++.||+|
T Consensus 306 ~~sp~~~~llas~s~D~~v 324 (344)
T 4gqb_B 306 TWSPLNHSLLTTVGWDHQV 324 (344)
T ss_dssp EECSSSTTEEEEEETTSCE
T ss_pred EEeCCCCeEEEEEcCCCeE
Confidence 9999986 67799999986
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-45 Score=291.89 Aligned_cols=243 Identities=23% Similarity=0.362 Sum_probs=211.5
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeee---------------------------------
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT--------------------------------- 71 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--------------------------------- 71 (276)
+....+++|.++|++++|+|++++|++|+.||+|++||..+++....
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 45677899999999999999999999999999999999876554332
Q ss_pred ---------------eeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEecc--CCC
Q 023822 72 ---------------INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS--SKD 134 (276)
Q Consensus 72 ---------------~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~ 134 (276)
+..|...|.+++|+|++..+++++. |+.|++||+++++.+..+.+|...|.+++|+| +++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG---DGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC---CCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 2346667888999999999999988 99999999999999999999999999999987 467
Q ss_pred EEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceE
Q 023822 135 CFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANV 211 (276)
Q Consensus 135 ~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~ 211 (276)
+|++++.|+.|++||+++++++..+ +...+.+++|+|++.++++++ |+.|++||++..+. ...+....+...+.+
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~--~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE--VAIYSKESIIFGASS 289 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEcCCCcccceeE
Confidence 9999999999999999999988877 556688999999999888887 99999999987542 222222333457889
Q ss_pred EEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 212 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 212 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
++|+|+|++|++|+.|+.|++||+.+++.+..+. +|...|++++|+|+|++|++|+.||+|
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~---~h~~~v~~l~~spdg~~l~sgs~D~~v 350 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILF---GHENRVSTLRVSPDGTAFCSGSWDHTL 350 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC---CCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEE---CCCCcEEEEEECCCCCEEEEEcCCCCE
Confidence 9999999999999999999999999999998888 799999999999999999999999975
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-45 Score=287.39 Aligned_cols=239 Identities=18% Similarity=0.227 Sum_probs=215.7
Q ss_pred ceeeccCCCcEEEEEEcCC----CCEEEEeecCCeEEEEEccCCee--eeeeeeeeeceEEEEEeccCCeEEEeccCCCC
Q 023822 27 GMSFRDYNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 100 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d 100 (276)
.+.+++|.++|++++|+|+ +.+|++|+.|++|++|++..++. ...+.+|...|.+++|++++..+++++. |
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~---D 101 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL---D 101 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET---T
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC---C
Confidence 4567899999999999974 56899999999999999987654 4467899999999999999999999998 9
Q ss_pred CceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEE
Q 023822 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAV 178 (276)
Q Consensus 101 ~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 178 (276)
+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....+. ...+.+++|+|++++|++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999988877763 345678999999999988
Q ss_pred ee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEE
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 257 (276)
+. |+.|++||+++++. ...+..|..+|.+++|+|++++|++++.|+.|++||+++++....+. +|...|.++
T Consensus 182 g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~ 254 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKL----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS---GHASWVLNV 254 (321)
T ss_dssp EETTSCEEEEETTTTEE----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC---CCSSCEEEE
T ss_pred EcCCCeEEEEECCCCcE----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc---CCCCceEEE
Confidence 88 99999999987653 56677899999999999999999999999999999999999998888 799999999
Q ss_pred EECCCCcEEEEecCCCCC
Q 023822 258 SFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 258 ~~s~~g~~l~~~~~dg~v 275 (276)
+|+|++++|++++.||+|
T Consensus 255 ~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 255 AFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp EECTTSSEEEEEETTSCE
T ss_pred EECCCCCEEEEEeCCCcE
Confidence 999999999999999976
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.3e-45 Score=284.63 Aligned_cols=242 Identities=18% Similarity=0.266 Sum_probs=215.0
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
.+....+..|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+..|...|.+++|+|+++++++++. |+.|
T Consensus 45 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~---D~~v 121 (304)
T 2ynn_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD---DLTV 121 (304)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET---TSCE
T ss_pred CceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECC---CCeE
Confidence 4456778899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCC-ceeeeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCceeeeeEe---ecCCCeeEecC--CCcEE
Q 023822 104 RLLSLHDN-KYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLR---VQGRPAAAYDD--QGLVF 176 (276)
Q Consensus 104 ~~~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~--~~~~l 176 (276)
++||++++ .....+.+|...|.+++|+| ++.+|++++.|++|++||++.......+. ...+..+.++| ++.++
T Consensus 122 ~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp EEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred EEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence 99999887 45567889999999999999 57899999999999999998877665553 24456777876 66677
Q ss_pred EEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 177 AVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 177 ~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
++++ |+.|++||+++++. ...+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+. .+...+.
T Consensus 202 ~s~s~D~~i~iWd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~---~~~~~~~ 274 (304)
T 2ynn_A 202 ITASDDLTIKIWDYQTKSC----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---VGLERSW 274 (304)
T ss_dssp EEEETTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC---CSSSSEE
T ss_pred EEEcCCCeEEEEeCCCCcc----ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc---CCCccEE
Confidence 7776 99999999987654 66778899999999999999999999999999999999999999998 6788999
Q ss_pred EEEECCCCc--EEEEecCCCCC
Q 023822 256 EASFSPEGM--FVISGRVSPFS 275 (276)
Q Consensus 256 ~~~~s~~g~--~l~~~~~dg~v 275 (276)
+++|+|++. ++++|+.||++
T Consensus 275 ~~~~~~~~~~~~~asg~~~g~~ 296 (304)
T 2ynn_A 275 CIATHPTGRKNYIASGFDNGFT 296 (304)
T ss_dssp EEEECTTCGGGCEEEEETTEEE
T ss_pred EEEECCCCCceEEEEecCCceE
Confidence 999999885 69999998864
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-44 Score=281.27 Aligned_cols=239 Identities=18% Similarity=0.294 Sum_probs=209.3
Q ss_pred ccccceeeccCCCcEEEEEEcCCC-CEEEEeecCCeEEEEEccC-----CeeeeeeeeeeeceEEEEEeccCCeEEEecc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTA-----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 96 (276)
.+.+..++.+|.++|++++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|+++++++++.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 456667899999999999999965 8999999999999999864 3456788999999999999999999999998
Q ss_pred CCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCC-
Q 023822 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG- 173 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~- 173 (276)
|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++.. +...+ +...+..+.+.|..
T Consensus 86 ---D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 86 ---DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp ---TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC--
T ss_pred ---CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCC
Confidence 999999999999999999999999999999999999999999999999999754 34444 45567788888854
Q ss_pred -----cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC
Q 023822 174 -----LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (276)
Q Consensus 174 -----~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (276)
..+++++ |+.|++||+++.+. ...+.+|...|.+++|+|+|++|++++.||.|++||+.+++.+..+.
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~----~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-- 235 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQI----EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-- 235 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEE----EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchh----heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--
Confidence 3555555 99999999987543 55677899999999999999999999999999999999999998887
Q ss_pred CCCCCceEEEEECCCCcEEEEecCCC
Q 023822 248 PVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 248 ~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+...|.+++|+|++.+|++++.++
T Consensus 236 --~~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 236 --AQDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp --CCSCEEEEEECSSSSEEEEEETTE
T ss_pred --CCCcEEEEEEcCCCCEEEEEcCCC
Confidence 457899999999999999988765
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.3e-44 Score=278.48 Aligned_cols=244 Identities=12% Similarity=0.081 Sum_probs=203.7
Q ss_pred eeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccC--CeeeeeeeeeeeceEEEEEecc--CCeEEEeccCCCCCce
Q 023822 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA--ATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDESL 103 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~d~~i 103 (276)
..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.. .+.+..+.+|..+|.+++|+++ ++.|++++. |+.|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TTEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC---CCEE
Confidence 45789999999999999999999999999999999974 4677889999999999999864 889999998 9999
Q ss_pred EEEEccCCc--eeeeecccCcceEEEEeccC--CCEEEEeeCCCeEEEEeccCceee--eeE--eecCCCeeEecCC---
Q 023822 104 RLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQ--GLL--RVQGRPAAAYDDQ--- 172 (276)
Q Consensus 104 ~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~--~~~--~~~~~~~~~~~~~--- 172 (276)
++||+++++ .+..+..|...|.+++|+|+ +++|++++.|+.|++||++..... ..+ +...+.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998874 55677889999999999997 889999999999999999876322 222 4556778999996
Q ss_pred ----------CcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC---cEEEEeecCCcEEEEECCCC
Q 023822 173 ----------GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG---RLMLLTTMEGHIHVLDSFRG 238 (276)
Q Consensus 173 ----------~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~ 238 (276)
+++|++++ |+.|++||++...........+.+|...|.+++|+|++ ++|++++.|+.|++||+.+.
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 45666666 99999999987553222345677899999999999984 89999999999999998775
Q ss_pred cE---EEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 239 TL---LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 239 ~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.. ...+. ...+...|.+++|+|+|++|++++.||+|
T Consensus 240 ~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~las~~~D~~v 278 (297)
T 2pm7_B 240 QGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (297)
T ss_dssp TSCCEEEESS-SSCCSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred CCccceeeee-cccCCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 31 22221 12578899999999999999999999976
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.9e-44 Score=287.09 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=204.5
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC------
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN------ 97 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------ 97 (276)
+...+++++|.++|++++|+|++++|++|+.|++|++||+.+++....+..|...|.+++|+|+++++++++.+
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 34567799999999999999999999999999999999999999999888888888888888888777766540
Q ss_pred -----------------------------------------CCCCceEEEEccCCceeeee-----cccCcceEEEEecc
Q 023822 98 -----------------------------------------GWDESLRLLSLHDNKYLRYF-----KGHHDRVVSLSLCS 131 (276)
Q Consensus 98 -----------------------------------------~~d~~i~~~d~~~~~~~~~~-----~~~~~~i~~~~~~~ 131 (276)
+.|+.|++||+.+++.+..+ .+|...|.+++|++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 01556666666666555554 56888999999987
Q ss_pred -CCCEEEEeeCCCeEEEEeccC-ceeeeeE--eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeee----
Q 023822 132 -SKDCFISGSLDRTVLLWDQRA-EKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSV---- 202 (276)
Q Consensus 132 -~~~~l~~~~~d~~i~iwd~~~-~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~---- 202 (276)
++++|++|+.|++|++||++. .+....+ +...+.+++|+|++.+|++++ |+.|++||+++++. ...+..
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~~~~~ 293 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ--LQVYNREPDR 293 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE--EEEECCCCSS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE--EEEecccccc
Confidence 788999999999999999984 4555555 566789999999999888887 89999999997653 111111
Q ss_pred -cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeec-CCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 203 -GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV-KPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 203 -~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
..+...+.+++|+|+|++|++|+.||.|++||+.+++.+..+.. ..+|.+.|.+++|+|+|++|++|+.||++
T Consensus 294 ~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 294 NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 11223589999999999999999999999999999998877732 12688999999999999999999999986
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.3e-44 Score=285.28 Aligned_cols=238 Identities=16% Similarity=0.224 Sum_probs=199.9
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeee----eeeeeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT----INSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
......+|...|++++|+|++. +++++.||+|+|||+.+++.... ...|...|.+++|+|++++|++++. |+
T Consensus 86 ~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg 161 (357)
T 4g56_B 86 LCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DF 161 (357)
T ss_dssp GCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---TS
T ss_pred EecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---CC
Confidence 3445567999999999999975 55678899999999988765433 3468889999999999999999998 99
Q ss_pred ceEEEEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE----eecCCCeeEecCCC-cE
Q 023822 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL----RVQGRPAAAYDDQG-LV 175 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~-~~ 175 (276)
.|++||+++++.+..+.+|...|.+++|+|++. ++++++.|+.|++||++++++...+ +...+.+++|+|++ .+
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce
Confidence 999999999999999999999999999999875 7899999999999999998877655 23346689999974 67
Q ss_pred EEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC-cEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCc
Q 023822 176 FAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS 253 (276)
Q Consensus 176 l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (276)
++++. |+.|++||+++++. ...+..|...|++++|+|++ ++|++++.|+.|+|||+++++++..+ +|.+.
T Consensus 242 la~g~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~~~ 313 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNPDS----AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHRDF 313 (357)
T ss_dssp EEEEESSSCEEEEESSCGGG----CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCSSC
T ss_pred EEEeecccceeEEECCCCcE----eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCCCC
Confidence 77766 89999999998664 55677888999999999987 67999999999999999999887665 48999
Q ss_pred eEEEEECC-CCcEEEEecCCCCC
Q 023822 254 TLEASFSP-EGMFVISGRVSPFS 275 (276)
Q Consensus 254 v~~~~~s~-~g~~l~~~~~dg~v 275 (276)
|++++|+| ++++|++++.||+|
T Consensus 314 V~~vafsP~d~~~l~s~s~Dg~v 336 (357)
T 4g56_B 314 VTGVAWSPLDHSKFTTVGWDHKV 336 (357)
T ss_dssp EEEEEECSSSTTEEEEEETTSCE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeE
Confidence 99999998 89999999999986
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=281.12 Aligned_cols=246 Identities=12% Similarity=0.172 Sum_probs=207.9
Q ss_pred ccccceeeccCCC-cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeee---eeeeeeeceEEEEEeccCCeEEEeccCC
Q 023822 23 SMEVGMSFRDYNG-RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK---TINSKKYGVDLVCFTSHPTTVIYSSKNG 98 (276)
Q Consensus 23 ~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 98 (276)
.++...++.+|.. .|.+++|+|++++||+|+.|++|+|||+.+++... ...+|...|.+++|+|++++|++++.
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~-- 81 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF-- 81 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET--
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC--
Confidence 4567788999988 99999999999999999999999999998876432 23578899999999999999999998
Q ss_pred CCCceEEEEccCCc--eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCcee---eeeE--eecCCCeeEecC
Q 023822 99 WDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLL--RVQGRPAAAYDD 171 (276)
Q Consensus 99 ~d~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~--~~~~~~~~~~~~ 171 (276)
|+.+++||+..+. .+..+.+|...|.+++|+|++++|++++.|++|++||++.... ...+ +...+.+++|+|
T Consensus 82 -D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 82 -DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp -TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred -CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 9999999998764 5678899999999999999999999999999999999987643 3333 455678999999
Q ss_pred CCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC------------
Q 023822 172 QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG------------ 238 (276)
Q Consensus 172 ~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~------------ 238 (276)
++.+|++++ |+.|++||.+..+. .....+.+|...|.+++|+|+|++|++++.|+.|++|+....
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~ 238 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSD 238 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---
T ss_pred CCCEEEEEeCCCcEEEEEecCCCE--EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccC
Confidence 998888887 99999999986431 224567789999999999999999999999999999996322
Q ss_pred ---cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 239 ---TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 239 ---~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+++..+.. .|...|.+++|+|++..|++++.|+.+
T Consensus 239 ~~~~~~~~~~~--~h~~~v~~v~~~~~~~~l~s~~~d~~i 276 (345)
T 3fm0_A 239 PSWKCICTLSG--FHSRTIYDIAWCQLTGALATACGDDAI 276 (345)
T ss_dssp CEEEEEEEECS--SCSSCEEEEEECTTTCCEEEEETTSCE
T ss_pred CccceeEEecC--CCCCcEEEEEEecCCCEEEEEeCCCeE
Confidence 22333331 378899999999999999999999875
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-42 Score=271.42 Aligned_cols=247 Identities=22% Similarity=0.419 Sum_probs=215.3
Q ss_pred hccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
..+....++.+|.++|++++|+|++++|++++.||.|++|++.+++....+..|...|.+++|+|+++++++++. |+
T Consensus 11 ~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~ 87 (312)
T 4ery_A 11 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD---DK 87 (312)
T ss_dssp CCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TS
T ss_pred CCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC---CC
Confidence 345667788999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred ceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEe
Q 023822 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVA 179 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 179 (276)
.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ +...+.+++|+|++.+++++
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999999999888777 44567789999999888887
Q ss_pred e-CCeEEEEecccCCCCCeeeee-ecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEE
Q 023822 180 F-GGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 257 (276)
+ |+.|++||+++.+. ... ...+..++..++|+|++++|++++.|+.|++||+.+++.+..+..+......+...
T Consensus 168 ~~d~~i~~wd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
T 4ery_A 168 SYDGLCRIWDTASGQC----LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 243 (312)
T ss_dssp ETTSCEEEEETTTCCE----EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEE
T ss_pred eCCCcEEEEECCCCce----eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEE
Confidence 7 99999999987543 222 33456689999999999999999999999999999999998887432112223333
Q ss_pred EECCCCcEEEEecCCCCC
Q 023822 258 SFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 258 ~~s~~g~~l~~~~~dg~v 275 (276)
...+++++|++|+.||.|
T Consensus 244 ~~~~~~~~l~sg~~dg~i 261 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDNLV 261 (312)
T ss_dssp EECSSSCEEEECCTTSCE
T ss_pred EEeCCCcEEEEECCCCEE
Confidence 344788999999999975
No 16
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.8e-42 Score=270.64 Aligned_cols=241 Identities=17% Similarity=0.256 Sum_probs=209.9
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
.+...+++|...|.+++|+|++++|++++.|++|++||+.+++.+..+.+|...|.+++|+|++..+++++. |+.|+
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~ 132 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIK 132 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEE
Confidence 446778999999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEccCCceeeeecccCcceEEEEeccC------CCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEE
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSS------KDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVF 176 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l 176 (276)
+||++ ++.+..+.+|...|.+++|.|. +..+++++.|+.|++||+++.+....+ +...+.+++|+|++++|
T Consensus 133 vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 133 VWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp EEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEE
T ss_pred EEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEE
Confidence 99996 4567788899999999999985 448999999999999999998887777 56678899999999998
Q ss_pred EEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC-----CCC
Q 023822 177 AVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-----PVS 250 (276)
Q Consensus 177 ~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~ 250 (276)
++++ |+.|++||+++.+. ...+. +..++.+++|+|++.+|++++.+ .+++|++..+..+..+... ..+
T Consensus 212 ~s~~~dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~ 285 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKA----MYTLS-AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAA 285 (319)
T ss_dssp EEEETTCEEEEEETTTTEE----EEEEE-CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGG
T ss_pred EEEeCCCeEEEEECCCCcE----EEEec-CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCc
Confidence 8887 89999999987553 33343 34689999999999999888755 5999999888777766421 124
Q ss_pred CCceEEEEECCCCcEEEEecCCCCC
Q 023822 251 RNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 251 ~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
...+.+++|+|||++|++|+.||+|
T Consensus 286 ~~~v~~~~~spdg~~l~sg~~Dg~i 310 (319)
T 3frx_A 286 EPHAVSLAWSADGQTLFAGYTDNVI 310 (319)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CcceeEEEECCCCCEEEEeecCceE
Confidence 5678999999999999999999986
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.7e-42 Score=269.29 Aligned_cols=242 Identities=17% Similarity=0.275 Sum_probs=213.5
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
.+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++++..+..|...|.++.|+|+++.+++++. |+.|
T Consensus 55 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i 131 (312)
T 4ery_A 55 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF---DESV 131 (312)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET---TSCE
T ss_pred cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC---CCcE
Confidence 3455678899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE---eecCCCeeEecCCCcEEEEee
Q 023822 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~ 180 (276)
++||+++++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++....+ +...+..++|+|++++++++.
T Consensus 132 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999998877766 233466899999999888887
Q ss_pred -CCeEEEEecccCCCCCeeeeeecCCCCCc---eEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEE
Q 023822 181 -GGYIRMFDARKYEKGPFDIFSVGGDISDA---NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (276)
Q Consensus 181 -d~~i~~~d~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 256 (276)
|+.|++||+++++. ...+..|.... ......+++++|++|+.||.|++||+.+++.+..+. +|...|.+
T Consensus 212 ~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~---~h~~~v~~ 284 (312)
T 4ery_A 212 LDNTLKLWDYSKGKC----LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ---GHTDVVIS 284 (312)
T ss_dssp TTTEEEEEETTTTEE----EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC---CCSSCEEE
T ss_pred CCCeEEEEECCCCcE----EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh---ccCCcEEE
Confidence 89999999987553 44444554433 233344678999999999999999999999999998 78999999
Q ss_pred EEECCCCcEEEEec--CCCCC
Q 023822 257 ASFSPEGMFVISGR--VSPFS 275 (276)
Q Consensus 257 ~~~s~~g~~l~~~~--~dg~v 275 (276)
++|+|++++|++++ .|++|
T Consensus 285 ~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 285 TACHPTENIIASAALENDKTI 305 (312)
T ss_dssp EEECSSSSEEEEEECTTTCCE
T ss_pred EeecCcCCceEEEEccCCccE
Confidence 99999999999986 57765
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-42 Score=273.46 Aligned_cols=241 Identities=12% Similarity=0.157 Sum_probs=199.3
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
.+...+.+|...|.+++|+|++.+|++++.|++|++||+.+++.+..+.+|...|.+++|+|+++++++++. |+.|+
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~---d~~i~ 143 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA---EREIK 143 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET---TSCEE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC---CCEEE
Confidence 345678899999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEccCCceeeee---cccCcceEEEEeccCC----------CEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEe
Q 023822 105 LLSLHDNKYLRYF---KGHHDRVVSLSLCSSK----------DCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAY 169 (276)
Q Consensus 105 ~~d~~~~~~~~~~---~~~~~~i~~~~~~~~~----------~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~ 169 (276)
+||+.... .... ..|...|.+++|+|++ .+|++++.|+.|++||.+ .+....+ +...+.+++|
T Consensus 144 ~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 144 LWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp EEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEE
T ss_pred EEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEE
Confidence 99997433 3222 3688999999999987 789999999999999944 4444444 5556789999
Q ss_pred cCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEE--Eeec
Q 023822 170 DDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS--TYNV 246 (276)
Q Consensus 170 ~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~ 246 (276)
+|++++|++++ |+.|++||++..... ...+ .+...|.+++|+|++++++++ .|+.|++||+.+++... .+..
T Consensus 222 s~~g~~l~sgs~dg~v~iwd~~~~~~~---~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 222 SPNGKYIATGGKDKKLLIWDILNLTYP---QREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp CTTSSEEEEEETTCEEEEEESSCCSSC---SEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCccc---ceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeec
Confidence 99999988887 999999999654321 1111 234579999999999877655 67789999998876544 3321
Q ss_pred --------CCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 247 --------KPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 247 --------~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
..+|...|.+++|+|+|++|++|+.||+|
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v 333 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVI 333 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEE
T ss_pred CcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceE
Confidence 11477889999999999999999999976
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.6e-42 Score=270.99 Aligned_cols=238 Identities=16% Similarity=0.225 Sum_probs=200.3
Q ss_pred ccccceeeccCCCcEEEEEE-----cC-CCCEEEEeecCCeEEEEEccC-------CeeeeeeeeeeeceEEEEEeccCC
Q 023822 23 SMEVGMSFRDYNGRISSMDF-----HK-SSSYLVTASDDESIRLYDVTA-------ATCLKTINSKKYGVDLVCFTSHPT 89 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~ 89 (276)
.++....+++|.+.|++++| ++ ++++|++|+.|++|++||+.+ +.+...+.+|...|.+++|+|++.
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~ 89 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC 89 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC
Confidence 34556789999999999999 76 899999999999999999874 345677889999999999999999
Q ss_pred eEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE----eecCCC
Q 023822 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL----RVQGRP 165 (276)
Q Consensus 90 ~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~ 165 (276)
++++++. |+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+......... +...+.
T Consensus 90 ~l~s~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 90 FAISSSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp EEEEEET---TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred EEEEEcC---CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 9999998 999999999999999999999999999999999999999999999999999854332222 344567
Q ss_pred eeEecCCC----------cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEE
Q 023822 166 AAAYDDQG----------LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234 (276)
Q Consensus 166 ~~~~~~~~----------~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 234 (276)
+++|+|++ .++++++ |+.|++||... .....+..|...|.+++|+|+|++|++|+.||.|++||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEE
Confidence 89999876 5666665 99999999432 12455678889999999999999999999999999999
Q ss_pred CC-CCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCC
Q 023822 235 SF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
+. .......+. +...|.+++|+|++++|++++.+
T Consensus 242 ~~~~~~~~~~~~----~~~~v~~v~~sp~~~~la~~~d~ 276 (343)
T 2xzm_R 242 ILNLTYPQREFD----AGSTINQIAFNPKLQWVAVGTDQ 276 (343)
T ss_dssp SSCCSSCSEEEE----CSSCEEEEEECSSSCEEEEEESS
T ss_pred CCCCcccceeec----CCCcEEEEEECCCCCEEEEECCC
Confidence 94 444444443 45679999999999988876543
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-42 Score=271.23 Aligned_cols=244 Identities=16% Similarity=0.250 Sum_probs=197.8
Q ss_pred hccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCC--eeeeee-ee-eeeceEEEEEeccCCeEEEeccC
Q 023822 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTI-NS-KKYGVDLVCFTSHPTTVIYSSKN 97 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~~ 97 (276)
..++....+++|.++|.+++|+|+ +|++|+.|++|++||+..+ +....+ .. |...|.+++|+|++++|++++.
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~- 78 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF- 78 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-
T ss_pred cccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-
Confidence 345677889999999999999987 9999999999999999875 445555 34 8889999999999999999998
Q ss_pred CCCCceEEEEccC-------CceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCc----eeeeeE--eecCC
Q 023822 98 GWDESLRLLSLHD-------NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE----KCQGLL--RVQGR 164 (276)
Q Consensus 98 ~~d~~i~~~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~--~~~~~ 164 (276)
|+.|++||+.. .+.+..+.+|...|.+++|+|++++|++++.|++|++||++.. +++..+ +...+
T Consensus 79 --D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 79 --DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp --TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred --CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 99999999853 3456778899999999999999999999999999999999532 344444 45567
Q ss_pred CeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCC--CcEEEEeecCCcEEEEECCCC---
Q 023822 165 PAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSFRG--- 238 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~--- 238 (276)
.+++|+|++.+|++++ |+.|++||.+.... .....+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIWKDYDDDW--ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCCe--eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 8999999999888887 99999999876421 225567789999999999998 778999999999999998654
Q ss_pred -----cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 239 -----TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 239 -----~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.....+.. .|...|.+++|++++ +|++++.||+|
T Consensus 235 ~~~~~~~~~~~~~--~h~~~v~~v~~s~~~-~l~s~~~dg~v 273 (330)
T 2hes_X 235 DQQEWVCEAILPD--VHKRQVYNVAWGFNG-LIASVGADGVL 273 (330)
T ss_dssp SCEEEEEEEECCS--CCSSCEEEEEECTTS-CEEEEETTSCE
T ss_pred ccceeEEeeeccc--ccccceEEEEEcCCC-EEEEEeCCCEE
Confidence 23333331 388999999999765 89999999975
No 21
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6e-43 Score=274.84 Aligned_cols=241 Identities=12% Similarity=0.087 Sum_probs=195.4
Q ss_pred eeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEec--cCCeEEEeccCCCCCce
Q 023822 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDESL 103 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d~~i 103 (276)
..+.+|.++|++++|+|++++||+|+.|++|+|||+.+++ .+..+.+|..+|.+++|++ +++.|++++. |+.|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---D~~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY---DRKV 83 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET---TSCE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC---CCEE
Confidence 3467899999999999999999999999999999998775 4677889999999999986 4889999998 9999
Q ss_pred EEEEccCCc--eeeeecccCcceEEEEeccC--CCEEEEeeCCCeEEEEeccCcee---eeeE--eecCCCeeEecCC--
Q 023822 104 RLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKC---QGLL--RVQGRPAAAYDDQ-- 172 (276)
Q Consensus 104 ~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~---~~~~--~~~~~~~~~~~~~-- 172 (276)
++||+++++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.... ...+ +...+.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 999998874 56677889999999999998 78999999999999999987632 2222 4556778999987
Q ss_pred ---------------CcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC----cEEEEeecCCcEEE
Q 023822 173 ---------------GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG----RLMLLTTMEGHIHV 232 (276)
Q Consensus 173 ---------------~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~i 232 (276)
+.+|++++ |+.|++||++.... ......+.+|...|.+++|+|++ ++|++++.|++|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCc-cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 35666666 99999999975321 12245667899999999999986 88999999999999
Q ss_pred EECCCCc----EEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 233 LDSFRGT----LLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 233 ~d~~~~~----~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
|++.+.. ....+. .|...|.+++|+|+|++|++++.||+|
T Consensus 243 w~~~~~~~~~~~~~~~~---~~~~~v~~v~~sp~g~~las~~~D~~v 286 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLH---KFNDVVWHVSWSITANILAVSGGDNKV 286 (316)
T ss_dssp EECSSTTCCCCBCCEEE---ECSSCEEEEEECTTTCCEEEEESSSCE
T ss_pred EEccCccccchhhhhhh---cCCCcEEEEEEcCCCCEEEEEcCCCeE
Confidence 9987631 122334 478899999999999999999999986
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.7e-42 Score=276.66 Aligned_cols=237 Identities=21% Similarity=0.325 Sum_probs=201.3
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeee------------------ceEEEEEeccCCeEEE
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY------------------GVDLVCFTSHPTTVIY 93 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 93 (276)
+|.+.|.+++|+|+|++||+++ ++.+++|++.+++.+..+..+.. .|.+++|+|+++++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 68999999999988877765432 3899999999999999
Q ss_pred eccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-eecCCCeeEecC-
Q 023822 94 SSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQGRPAAAYDD- 171 (276)
Q Consensus 94 ~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~- 171 (276)
++. |+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++++...+ ....+..++++|
T Consensus 141 ~~~---d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAE---DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EcC---CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 998 999999999999999999999999999999999999999999999999999999887776 445677899999
Q ss_pred CCcEEEEee-CCeEEEEecccCCCCCee---eeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC---------
Q 023822 172 QGLVFAVAF-GGYIRMFDARKYEKGPFD---IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG--------- 238 (276)
Q Consensus 172 ~~~~l~~~~-d~~i~~~d~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--------- 238 (276)
++.++++++ |+.|++||++++...... .....+|...|.+++|+|+|++|++++.|+.|++||+.+.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 888888777 999999999875421000 0112468889999999999999999999999999998763
Q ss_pred ---cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 239 ---TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 239 ---~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.+...+. +|...|.+++|+|++++|++|+.||.|
T Consensus 298 ~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~sgs~D~~v 334 (393)
T 1erj_A 298 NSGTCEVTYI---GHKDFVLSVATTQNDEYILSGSKDRGV 334 (393)
T ss_dssp ---CEEEEEE---CCSSCEEEEEECGGGCEEEEEETTSEE
T ss_pred CCCcceEEEe---cccCcEEEEEECCCCCEEEEEeCCCeE
Confidence 3344555 688999999999999999999999875
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-42 Score=293.39 Aligned_cols=246 Identities=14% Similarity=0.189 Sum_probs=205.7
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee-------eeeeceEEEEEeccCCeEEEec
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSHPTTVIYSS 95 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~ 95 (276)
..+....+.+|.+.|.+++|+|++++|++++.|++|++||+.+++++..+. .|...|.+++|+|++++|++++
T Consensus 179 ~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 179 PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 345567889999999999999999999999999999999999998888874 7899999999999999999999
Q ss_pred cCCCCCceEEEEccCCceee-------------------------------------------eecccCcceEEEEeccC
Q 023822 96 KNGWDESLRLLSLHDNKYLR-------------------------------------------YFKGHHDRVVSLSLCSS 132 (276)
Q Consensus 96 ~~~~d~~i~~~d~~~~~~~~-------------------------------------------~~~~~~~~i~~~~~~~~ 132 (276)
. |+.|++||+.+++.+. .+.+|...|.+++|+|+
T Consensus 259 ~---D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd 335 (611)
T 1nr0_A 259 A---DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD 335 (611)
T ss_dssp T---TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred C---CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence 8 9999999998765433 33578899999999999
Q ss_pred CCEEEEeeCCCeEEEEeccCceeeeeE-----------------------------------------------------
Q 023822 133 KDCFISGSLDRTVLLWDQRAEKCQGLL----------------------------------------------------- 159 (276)
Q Consensus 133 ~~~l~~~~~d~~i~iwd~~~~~~~~~~----------------------------------------------------- 159 (276)
+++|++++.|++|++||+.+++....+
T Consensus 336 g~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~ 415 (611)
T 1nr0_A 336 GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPL 415 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEE
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCc
Confidence 999999999999999998865432211
Q ss_pred -------------------------------eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCC
Q 023822 160 -------------------------------RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDIS 207 (276)
Q Consensus 160 -------------------------------~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~ 207 (276)
+...+.+++|+|+++++++++ |+.|++||+..... .......|..
T Consensus 416 ~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~---~~~~~~~h~~ 492 (611)
T 1nr0_A 416 GLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV---SEVKTIVHPA 492 (611)
T ss_dssp EEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE---EEEEEEECSS
T ss_pred EEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce---eeeeccCCCC
Confidence 001234688999999999888 89999999976431 1112256888
Q ss_pred CceEEEECCCCcEEEEeecCCcEEEEECCC-CcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 208 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.|++++|+|+|++|++++.|+.|++|++.+ ++++.... ...|...|.+++|+|||++|++|+.|++|
T Consensus 493 ~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~-~~~H~~~V~~v~fspdg~~lasgs~D~~v 560 (611)
T 1nr0_A 493 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS-WTFHTAKVACVSWSPDNVRLATGSLDNSV 560 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC-CCCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeee-eeecccceeEEEECCCCCEEEEEECCCcE
Confidence 999999999999999999999999999987 55544311 11489999999999999999999999986
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-41 Score=274.66 Aligned_cols=234 Identities=15% Similarity=0.211 Sum_probs=205.5
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
..|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++.+++++. |+.|++||+++++..
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCS 200 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeE
Confidence 35999999999999999999999999999999999999999999999999999999999998 999999999999887
Q ss_pred eeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCceeeeeE---------eecCCCeeEecCCCcEEEEee-CCe
Q 023822 115 RYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLL---------RVQGRPAAAYDDQGLVFAVAF-GGY 183 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~-d~~ 183 (276)
..+. +...+.+++|+| ++++|++++.|+.|++||+++++....+ +...+.+++|+|+++++++++ |+.
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 7776 667799999999 8999999999999999999998776655 334577899999999888887 999
Q ss_pred EEEEecccCCCC--------CeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 184 IRMFDARKYEKG--------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 184 i~~~d~~~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
|++||++..... ......+.+|...|.+++|+|++++|++|+.|+.|++||..+++.+..+. +|...|.
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~---~h~~~v~ 356 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVI 356 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC---CCCCCEE
Confidence 999999864321 11234556788899999999999999999999999999999999999998 7999999
Q ss_pred EEEECC------CCcEEEEecCCCCC
Q 023822 256 EASFSP------EGMFVISGRVSPFS 275 (276)
Q Consensus 256 ~~~~s~------~g~~l~~~~~dg~v 275 (276)
+++|++ ++++|++|+.||+|
T Consensus 357 ~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 357 SVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp EEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred EEEecCCcCcCCCCCEEEEECCCCcE
Confidence 999986 78999999999975
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-41 Score=288.61 Aligned_cols=246 Identities=16% Similarity=0.152 Sum_probs=209.2
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEeccCCeEEEeccCC-CC
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNG-WD 100 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~d 100 (276)
.+....+.+|...|++++|+|+|++||+|+.|++|+|||+.+++ ....+..|..+|.+++|+|+++.+++++.+. ..
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 45567789999999999999999999999999999999997543 4557788999999999999999999887521 01
Q ss_pred CceEEEEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEE
Q 023822 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFA 177 (276)
Q Consensus 101 ~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 177 (276)
+.|++|| .++....+.+|...|.+++|+|++. .|++++.|++|++||.++.+....+ |...+.+++|+|++++|+
T Consensus 129 ~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 129 GHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp EEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred eEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEE
Confidence 4677776 5666778899999999999999987 6999999999999999998888777 555688999999999888
Q ss_pred Eee-CCeEEEEecccCCCCCeeeeeec-------CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeec---
Q 023822 178 VAF-GGYIRMFDARKYEKGPFDIFSVG-------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV--- 246 (276)
Q Consensus 178 ~~~-d~~i~~~d~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--- 246 (276)
+++ |+.|++||+++++. ...+. +|...|.+++|+|+|++|++++.|+.|++||+.+++++..+..
T Consensus 207 s~s~D~~i~lwd~~~g~~----~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTK----TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp EEETTSCEEEEETTTCCE----EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEECCCcEEEEECCCCcE----eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 887 99999999987553 22221 6889999999999999999999999999999998877654421
Q ss_pred -------------------------------------CCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 247 -------------------------------------KPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 247 -------------------------------------~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
..+|...|++++|+|+|++|++++.||+|
T Consensus 283 ~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v 348 (611)
T 1nr0_A 283 IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHI 348 (611)
T ss_dssp GGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcE
Confidence 12688899999999999999999999975
No 26
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-42 Score=274.08 Aligned_cols=246 Identities=12% Similarity=0.082 Sum_probs=210.9
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEcc--CCeeeeeeeeeeeceEEEEEecc--CCeEEEeccCCCCC
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDE 101 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~d~ 101 (276)
+...+++|.++|++++|+|++++|++++.||.|++||+. +++.+..+..|...|.+++|+++ ++++++++. |+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---dg 79 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DG 79 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TS
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---CC
Confidence 456789999999999999999999999999999999998 66778888999999999999977 899999998 99
Q ss_pred ceEEEEccCCc--eeeeecccCcceEEEEeccC--CCEEEEeeCCCeEEEEeccCceeeeeE----eecCCCeeEecC--
Q 023822 102 SLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLL----RVQGRPAAAYDD-- 171 (276)
Q Consensus 102 ~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~-- 171 (276)
.|++||+.+++ ....+..|...|.+++|+|+ +++|++++.|+.|++||++........ +...+.+++|+|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 67778889999999999999 899999999999999999987443332 445677999999
Q ss_pred -----------CCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCC---CcEEEEeecCCcEEEEECC
Q 023822 172 -----------QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 172 -----------~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~ 236 (276)
++.++++++ |+.|++||++...........+..|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 577777776 9999999998766433345567789999999999999 8999999999999999998
Q ss_pred CCcE---EEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 237 RGTL---LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 237 ~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
++.. ...+. ...+...|.+++|+|+|++|++++.||.+
T Consensus 240 ~~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 280 (379)
T 3jrp_A 240 NEQGPWKKTLLK-EEKFPDVLWRASWSLSGNVLALSGGDNKV 280 (379)
T ss_dssp STTSCCEEEESS-SSCCSSCEEEEEECSSSCCEEEEESSSSE
T ss_pred CCCccceeeeec-cccCCCcEEEEEEcCCCCEEEEecCCCcE
Confidence 8742 22222 12478899999999999999999999975
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-41 Score=268.47 Aligned_cols=244 Identities=14% Similarity=0.187 Sum_probs=192.3
Q ss_pred cceee-cc-CCCcEEEEEEcCCCCEEEEeecCCeEEEEEccC-------CeeeeeeeeeeeceEEEEEeccCCeEEEecc
Q 023822 26 VGMSF-RD-YNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 26 ~~~~~-~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 96 (276)
....+ .+ |.++|.+++|+|++++|++++.|++|++||+.. .+.+..+.+|...|.+++|+|++++|++++.
T Consensus 48 ~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 48 LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR 127 (330)
T ss_dssp EEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET
T ss_pred EEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 33444 34 999999999999999999999999999999853 3567778899999999999999999999998
Q ss_pred CCCCCceEEEEccCC----ceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCc--eeeeeE--eecCCCeeE
Q 023822 97 NGWDESLRLLSLHDN----KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE--KCQGLL--RVQGRPAAA 168 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~--~~~~~~~~~ 168 (276)
|+.|++||++.. +.+..+.+|...|.+++|+|++++|++++.|++|++||++.+ +++..+ +...+.+++
T Consensus 128 ---D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~ 204 (330)
T 2hes_X 128 ---DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSD 204 (330)
T ss_dssp ---TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred ---CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEE
Confidence 999999999432 456778899999999999999999999999999999999876 455555 555678899
Q ss_pred ecCC--CcEEEEee-CCeEEEEecccCCCCC----eeeeeecC-CCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE
Q 023822 169 YDDQ--GLVFAVAF-GGYIRMFDARKYEKGP----FDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL 240 (276)
Q Consensus 169 ~~~~--~~~l~~~~-d~~i~~~d~~~~~~~~----~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 240 (276)
|+|+ +..+++++ |+.|++||++...... .....+.. |...|.+++|++++ +|++++.||.|++||..+++.
T Consensus 205 ~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~ 283 (330)
T 2hes_X 205 FDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEW 283 (330)
T ss_dssp ECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEE
T ss_pred ecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCce
Confidence 9998 66666666 9999999997643211 11222333 78899999999776 799999999999999987743
Q ss_pred --EEEeecCCCCCC-ceEEEEECC--CCcEEEEecCCCCC
Q 023822 241 --LSTYNVKPVSRN-STLEASFSP--EGMFVISGRVSPFS 275 (276)
Q Consensus 241 --~~~~~~~~~~~~-~v~~~~~s~--~g~~l~~~~~dg~v 275 (276)
..... .+|.. .|.+++|+| ++++|++|+.||+|
T Consensus 284 ~~~~~~~--~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 284 KVFAKRA--LCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp EEEEEES--CTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred EEEeccc--cccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 22221 15666 899999999 78999999999976
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=267.26 Aligned_cols=243 Identities=14% Similarity=0.160 Sum_probs=202.4
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCC--eeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEE
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d 107 (276)
..+|...|.+++|+|++++|++|+.|+++++|++..+ +++..+.+|...|.+++|+|++++|++++. |+.|++||
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~---D~~v~iwd 133 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR---DKSVWVWE 133 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC---CCeEEEEE
Confidence 4689999999999999999999999999999998866 467788899999999999999999999998 99999999
Q ss_pred ccCCc---eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee--eeE--eecCCCeeEecCCCcEEEEee
Q 023822 108 LHDNK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ--GLL--RVQGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 108 ~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~--~~~~~~~~~~~~~~~~l~~~~ 180 (276)
+.++. .+..+..|...|.+++|+|++++|++++.|+.|++||++.++.. ..+ +...+.+++|+|++++|++++
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe
Confidence 98764 45677889999999999999999999999999999999887543 344 556678999999999888887
Q ss_pred -CCeEEEEecccCCCCC-----------eeeeeec-CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE----EE-
Q 023822 181 -GGYIRMFDARKYEKGP-----------FDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL----LS- 242 (276)
Q Consensus 181 -d~~i~~~d~~~~~~~~-----------~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~- 242 (276)
|+.|++||........ .....+. .|...|.+++|+|++..|++++.|+.|++|+...+.. ..
T Consensus 214 ~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~ 293 (345)
T 3fm0_A 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFS 293 (345)
T ss_dssp TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEE
T ss_pred CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEE
Confidence 9999999975432211 0111222 3778899999999999999999999999999875431 11
Q ss_pred -EeecCCCCCCceEEEEECCCC-cEEEEecCCCCC
Q 023822 243 -TYNVKPVSRNSTLEASFSPEG-MFVISGRVSPFS 275 (276)
Q Consensus 243 -~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v 275 (276)
......+|...|++++|+|++ .+|++|+.||+|
T Consensus 294 ~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v 328 (345)
T 3fm0_A 294 LTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328 (345)
T ss_dssp EEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCE
T ss_pred EEeeecccccCcEeEeEEeCCCceEEEEcCCCCcE
Confidence 111223689999999999998 599999999986
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=269.91 Aligned_cols=235 Identities=16% Similarity=0.163 Sum_probs=189.6
Q ss_pred ccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCC-----------eeeeeeeeeeeceEEEEEeccCCeEEEeccCCC
Q 023822 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA-----------TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (276)
Q Consensus 31 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 99 (276)
..|...|.+++|+|||++|++++ |+++++||.... ........+...|.+++|+|++ .+++++.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~--- 101 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD--- 101 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET---
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC---
Confidence 45778899999999999999887 677888873211 1111223355679999999985 6778887
Q ss_pred CCceEEEEccCCceeee----ecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCC
Q 023822 100 DESLRLLSLHDNKYLRY----FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG 173 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~ 173 (276)
||.|++||+.+++.... +.+|.+.|.+++|+|++++|++++.|++|++||+++++++..+ |...+.+++|+|++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSC
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCC
Confidence 99999999998876543 3479999999999999999999999999999999999999888 55678899999987
Q ss_pred -cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCC-CcEEEEeecCCcEEEEECCCCcEEEEeecCCCC
Q 023822 174 -LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (276)
Q Consensus 174 -~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (276)
.++++++ |+.|++||+++++. ........+...+.+++|+|+ +++|++|+.||.|++||+++++++..+. +|
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---~h 256 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---VH 256 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---CC
T ss_pred CCceeeeccccccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---CC
Confidence 4566555 99999999998664 222333445567899999995 5788999999999999999999999998 79
Q ss_pred CCceEEEEECCCC-cEEEEecCCCCC
Q 023822 251 RNSTLEASFSPEG-MFVISGRVSPFS 275 (276)
Q Consensus 251 ~~~v~~~~~s~~g-~~l~~~~~dg~v 275 (276)
...|++++|+|++ ++|++|+.||+|
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 9999999999998 589999999976
No 30
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-40 Score=263.60 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=209.4
Q ss_pred HHHhhccccceeeccCCCcEEEEEEcCC-CCEEEEeecCCeEEEEEccCC-----eeeeeeeeeeeceEEEEEeccCCeE
Q 023822 18 EEILQSMEVGMSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAA-----TCLKTINSKKYGVDLVCFTSHPTTV 91 (276)
Q Consensus 18 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l 91 (276)
....+++++..+|+||.+.|++++|+|+ +++|+||+.|++|+|||+.+. .+...+.+|...|.+++|+|+++++
T Consensus 22 ~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l 101 (340)
T 4aow_A 22 SMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA 101 (340)
T ss_dssp ----CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE
Confidence 3344666777889999999999999997 689999999999999998754 3566778899999999999999999
Q ss_pred EEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE---eecCCCeeE
Q 023822 92 IYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGRPAAA 168 (276)
Q Consensus 92 ~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~ 168 (276)
++++. |+.|++|+............+...+..+.+++++++|++++.|+.+++||+......... +...+..++
T Consensus 102 ~s~~~---d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 102 LSGSW---DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR 178 (340)
T ss_dssp EEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE
T ss_pred EEEcc---cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceE
Confidence 99998 999999999999888888888899999999999999999999999999999876554333 445566788
Q ss_pred ecCCC--cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 169 YDDQG--LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 169 ~~~~~--~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
+++++ .+++++. |+.|++||+++.+. ...+.+|..+|++++|+|++++|++++.||.|++||+.+.+.+..+.
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 254 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKL----KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD 254 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCce----eeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec
Confidence 87764 4555555 99999999987554 56677899999999999999999999999999999988776654432
Q ss_pred cC----------------------------------------------CCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 246 VK----------------------------------------------PVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 246 ~~----------------------------------------------~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.. .+|...|++++|+|+|++|++|+.||+|
T Consensus 255 ~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 255 GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 11 1356778999999999999999999976
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.1e-42 Score=272.37 Aligned_cols=237 Identities=16% Similarity=0.146 Sum_probs=190.3
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeec------CCeEEEEEccCCeeee----eeeeeeeceEEEEEeccCCeEEEeccCCC
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASD------DESIRLYDVTAATCLK----TINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 99 (276)
...|...|++++|+|||++||+++. |+.|++|+..++.... ....|...|.+++|+|++..+ +++.
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~--- 113 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASD--- 113 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEET---
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEEC---
Confidence 4579999999999999999999997 7889999987765433 335677889999999998655 5555
Q ss_pred CCceEEEEccCCceee----eecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCC
Q 023822 100 DESLRLLSLHDNKYLR----YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG 173 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~ 173 (276)
|+.|++||+.+++... ...+|...|.+++|+|++++|++++.|+.|++||+++++.+..+ +...+.+++|+|++
T Consensus 114 dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 9999999998876543 33479999999999999999999999999999999999988887 45667899999987
Q ss_pred c-EEEE-eeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCC-CcEEEEeecCCcEEEEECCCCcEEEEeecCCCC
Q 023822 174 L-VFAV-AFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (276)
Q Consensus 174 ~-~l~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (276)
. ++++ +.|+.|++||+++++. ........+...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+. +|
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~---~~ 268 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA---VH 268 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC---CC
T ss_pred CceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe---cc
Confidence 3 4444 4499999999988654 223344556778999999997 4788999999999999999999999888 78
Q ss_pred CCceEEEEECCCC-cEEEEecCCCCC
Q 023822 251 RNSTLEASFSPEG-MFVISGRVSPFS 275 (276)
Q Consensus 251 ~~~v~~~~~s~~g-~~l~~~~~dg~v 275 (276)
...|++++|+|++ ++|++|+.||+|
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 9999999999997 689999999976
No 32
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.5e-40 Score=259.69 Aligned_cols=232 Identities=16% Similarity=0.264 Sum_probs=211.9
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
+|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...+.+++|+|+++.+++++. |+.|++||++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS---DGNIAVWDLH 171 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET---TSCEEEEETT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC---CCcEEEEeCC
Confidence 799999999999999999999999999999999877 56677788889999999999999999998 9999999999
Q ss_pred CCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-eecCCCeeEecCCCcEEEEee-CCeEEEE
Q 023822 110 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVFAVAF-GGYIRMF 187 (276)
Q Consensus 110 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d~~i~~~ 187 (276)
+++....+..|...|.+++|+|++++|++++.|+.|++||+++++....+ +...+.+++|+|++.+++++. ++.|++|
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~ 251 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL 251 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence 99999999999999999999999999999999999999999999888777 445677899999999888887 8999999
Q ss_pred ecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEE
Q 023822 188 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (276)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 267 (276)
|++..+ ......|...+.+++|+|++++|++++.||.|++||+.+++.+.... +...+.+++|+|++++|+
T Consensus 252 ~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~ 322 (337)
T 1gxr_A 252 HVNKPD-----KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIV 322 (337)
T ss_dssp ETTSSC-----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEE
T ss_pred ECCCCC-----eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec----CCCcEEEEEECCCCCEEE
Confidence 998754 34566788899999999999999999999999999999999886655 788999999999999999
Q ss_pred EecCCCCC
Q 023822 268 SGRVSPFS 275 (276)
Q Consensus 268 ~~~~dg~v 275 (276)
+++.||.+
T Consensus 323 ~~~~dg~i 330 (337)
T 1gxr_A 323 TGSGDKKA 330 (337)
T ss_dssp EEETTSCE
T ss_pred EecCCCeE
Confidence 99999975
No 33
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-42 Score=279.46 Aligned_cols=239 Identities=12% Similarity=0.080 Sum_probs=198.8
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCC--eeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
.++.|.++|++++|+|++++|++++.|+.|++||+.++ +.+..+..|...|.+++|+|++++|++++. |+.|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ---DRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET---TSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC---CCeEEEE
Confidence 34557789999999999999999999999999999988 788889999999999999999999999998 9999999
Q ss_pred EccCCc---eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCcee---eeeE---eecCCCeeEecCCCcEEE
Q 023822 107 SLHDNK---YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLL---RVQGRPAAAYDDQGLVFA 177 (276)
Q Consensus 107 d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~---~~~~~~~~~~~~~~~~l~ 177 (276)
|+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ +...+.+++|+|++.+++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 162 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA 162 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence 999877 6677788999999999999999999999999999999998763 4444 455678999999998888
Q ss_pred Eee-CCeEEEEecccCCCC--------------CeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE--
Q 023822 178 VAF-GGYIRMFDARKYEKG--------------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL-- 240 (276)
Q Consensus 178 ~~~-d~~i~~~d~~~~~~~--------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-- 240 (276)
+++ |+.|++||++..... ......+ .|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 877 899999998643211 1112233 7888999999999999999999999999999999987
Q ss_pred --EEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 241 --LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 241 --~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
+..+. +|...|.+++|+|+|++|++|+.++.
T Consensus 242 ~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~~~~ 274 (377)
T 3dwl_C 242 RALITVK---LSQLPLRSLLWANESAIVAAGYNYSP 274 (377)
T ss_dssp EECCCEE---CSSSCEEEEEEEETTEEEEEESSSSE
T ss_pred eeeEeec---CCCCceEEEEEcCCCCEEEEEcCCcE
Confidence 66777 68899999999999999999988775
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.6e-40 Score=281.17 Aligned_cols=235 Identities=20% Similarity=0.342 Sum_probs=210.4
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEE
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~ 105 (276)
....+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+++|+|+++++++++. |+.|++
T Consensus 336 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---d~~v~~ 411 (577)
T 2ymu_A 336 HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD---DKTVKL 411 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEET---TSEEEE
T ss_pred eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeC---CCEEEE
Confidence 34567889999999999999999999999999999995 67888889999999999999999999999998 999999
Q ss_pred EEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-CC
Q 023822 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GG 182 (276)
Q Consensus 106 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~ 182 (276)
||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++....+ +...+.+++|+|++++|+++. |+
T Consensus 412 ~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 412 WNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp ECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTS
T ss_pred EeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 995 567788899999999999999999999999999999999975 4445555 556678999999999998887 89
Q ss_pred eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCC
Q 023822 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (276)
Q Consensus 183 ~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (276)
.|++||... + ....+.+|...|++++|+|+|++|++++.||.|++||. +++++..+. +|.+.|++++|+||
T Consensus 490 ~i~iw~~~~-~----~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~---~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 490 TVKLWNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVWGVAFSPD 560 (577)
T ss_dssp EEEEEETTS-C----EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE---CCSSCEEEEEECTT
T ss_pred EEEEEcCCC-C----EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc---CCCCCEEEEEEcCC
Confidence 999999642 2 25567789999999999999999999999999999995 788888888 79999999999999
Q ss_pred CcEEEEecCCCCC
Q 023822 263 GMFVISGRVSPFS 275 (276)
Q Consensus 263 g~~l~~~~~dg~v 275 (276)
|++|++++.||+|
T Consensus 561 g~~l~s~~~D~~i 573 (577)
T 2ymu_A 561 GQTIASASSDKTV 573 (577)
T ss_dssp SSCEEEEETTSCE
T ss_pred CCEEEEEeCCCEE
Confidence 9999999999976
No 35
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2e-40 Score=263.00 Aligned_cols=240 Identities=12% Similarity=0.082 Sum_probs=205.2
Q ss_pred eeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCC----eeeeeeeeeeeceEEEEEec--cCCeEEEeccCCCCC
Q 023822 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDE 101 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d~ 101 (276)
..+.+|.+.|++++|+|++++|++++.||.|++||+.++ +....+..|...|.+++|+| ++++|++++. |+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---DK 81 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---TS
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---CC
Confidence 457899999999999999999999999999999999876 46677788999999999999 6999999998 99
Q ss_pred ceEEEEccCC---------ceeeeecccCcceEEEEeccC--CCEEEEeeCCCeEEEEeccCceeeeeE-----------
Q 023822 102 SLRLLSLHDN---------KYLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLL----------- 159 (276)
Q Consensus 102 ~i~~~d~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~----------- 159 (276)
.|++||++++ +....+..|...|.+++|+|+ +++|++++.|+.|++||+++++....+
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999887 457778899999999999999 999999999999999999987655433
Q ss_pred ----eecCCCeeEecCC---CcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC----cEEEEeecC
Q 023822 160 ----RVQGRPAAAYDDQ---GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG----RLMLLTTME 227 (276)
Q Consensus 160 ----~~~~~~~~~~~~~---~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~d 227 (276)
+...+.++.|+|+ +.+++++. ++.+.+|+..... ......+..|...|.+++|+|++ ++|++++.|
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK--LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC--EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc--eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 2234668999996 77777777 7888777766533 22355667789999999999998 899999999
Q ss_pred CcEEEEECCCC----------------------------------------------cEEEEeecCCCCCCceEEEEECC
Q 023822 228 GHIHVLDSFRG----------------------------------------------TLLSTYNVKPVSRNSTLEASFSP 261 (276)
Q Consensus 228 g~i~i~d~~~~----------------------------------------------~~~~~~~~~~~~~~~v~~~~~s~ 261 (276)
|.|++||+.++ +.+..+. +|...|++++|+|
T Consensus 240 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 240 GRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD---DHNGEVWSVSWNL 316 (351)
T ss_dssp SCEEEEEEEECC---------------------------------------CCSEEEEEEEEEC---TTSSCEEEEEECS
T ss_pred CeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe---cccccEEEEEEcC
Confidence 99999999865 4555555 7889999999999
Q ss_pred CCcEEEEecCCCCC
Q 023822 262 EGMFVISGRVSPFS 275 (276)
Q Consensus 262 ~g~~l~~~~~dg~v 275 (276)
++++|++++.||.|
T Consensus 317 ~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 317 TGTILSSAGDDGKV 330 (351)
T ss_dssp SSCCEEEEETTSCE
T ss_pred CCCEEEEecCCCcE
Confidence 99999999999975
No 36
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=265.03 Aligned_cols=247 Identities=17% Similarity=0.230 Sum_probs=203.7
Q ss_pred hhccccceeeccCCCcEEEEEEcCC---CCEEEEeecCCeEEEEEccC-Ceee-eeeeeeeeceEEEEEeccCCeEEEec
Q 023822 21 LQSMEVGMSFRDYNGRISSMDFHKS---SSYLVTASDDESIRLYDVTA-ATCL-KTINSKKYGVDLVCFTSHPTTVIYSS 95 (276)
Q Consensus 21 ~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~ 95 (276)
...++....+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ ++.+ ..+..|...|.+++|+|++++|++++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 3456677788999999999999998 69999999999999999987 5544 77888999999999999999999999
Q ss_pred cCCCCCceEEEEccCCceeeeecccCcceEEEEe--ccCCCEEEEeeCCCeEEEEeccCceeeeeEeecC----------
Q 023822 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSL--CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG---------- 163 (276)
Q Consensus 96 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------- 163 (276)
. |+.|++||+++++... +..|...|.+++| +|++++|++++.|+.|++||+++++....+..+.
T Consensus 106 ~---dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 106 C---DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp T---TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred C---CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 8 9999999999988766 5569999999999 8899999999999999999999887665543211
Q ss_pred ---------------------------------CCeeEecCCCc-----EEEEeeCCeEEEEecccCCCCCeeeeeecCC
Q 023822 164 ---------------------------------RPAAAYDDQGL-----VFAVAFGGYIRMFDARKYEKGPFDIFSVGGD 205 (276)
Q Consensus 164 ---------------------------------~~~~~~~~~~~-----~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 205 (276)
..++.+.++.. +++++.|+.|++||++.... ......+..|
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~-~~~~~~~~~~ 260 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP-AKDNFTFKCH 260 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH-HHHSEEEECS
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc-cccceeeeee
Confidence 11233322221 44444489999999987532 0113334444
Q ss_pred CC------------CceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 206 IS------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 206 ~~------------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.. +|.+++|+|++++|++++.||.|++||+.+++++..+. .|...|.+++|+|+|++|++++.|+
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE---QLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC---CCSSCEEEEEECTTSSCEEEEECCC
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec---CCCCCceEEEECCCCCeEEEEeccc
Confidence 43 79999999999999999999999999999999999888 7899999999999999999999998
Q ss_pred CC
Q 023822 274 FS 275 (276)
Q Consensus 274 ~v 275 (276)
+.
T Consensus 338 ~~ 339 (368)
T 3mmy_A 338 WS 339 (368)
T ss_dssp ST
T ss_pred cc
Confidence 64
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.7e-40 Score=282.56 Aligned_cols=239 Identities=19% Similarity=0.253 Sum_probs=207.8
Q ss_pred cccceeeccCCCcEEEEEEcCC-CCEEEEeecCCeEEEEEccCC-----eeeeeeeeeeeceEEEEEeccCCeEEEeccC
Q 023822 24 MEVGMSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAA-----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKN 97 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 97 (276)
++....+++|.+.|++++|+|+ +++|++|+.|++|++|++.+. .....+.+|...|.+++|+|+++++++++.
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~- 450 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW- 450 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET-
T ss_pred cchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC-
Confidence 4555678999999999999986 479999999999999998753 456678899999999999999999999998
Q ss_pred CCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-----eecCCCeeEecCC
Q 023822 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-----RVQGRPAAAYDDQ 172 (276)
Q Consensus 98 ~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~ 172 (276)
|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+......... |...+.+++|+|+
T Consensus 451 --Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 451 --DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp --TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred --CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999998765433322 3445779999998
Q ss_pred C--cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCC
Q 023822 173 G--LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 249 (276)
Q Consensus 173 ~--~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 249 (276)
+ ..+++++ |+.|++||+++.+. ...+.+|...|++++|+|+|++|++++.||.|++||+.+++.+..+.
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~----~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~---- 600 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKL----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE---- 600 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB----
T ss_pred CCcceEEEEeCCCeEEEEECCCCcE----EEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec----
Confidence 6 4555555 99999999987553 56677899999999999999999999999999999999999988776
Q ss_pred CCCceEEEEECCCCcEEEEecCCC
Q 023822 250 SRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 250 ~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+...|.+++|+|++.+|++++.++
T Consensus 601 ~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 601 ANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTE
T ss_pred CCCcEEEEEEcCCCcEEEEEcCCC
Confidence 457899999999999998887654
No 38
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.1e-39 Score=286.17 Aligned_cols=242 Identities=18% Similarity=0.287 Sum_probs=218.9
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
++..+.+.+|.+.|.+++|+|++++|++++.||.|++||+.+++.+..+..|..+|.+++|+|+++.|++++. |+.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i 79 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRI 79 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEE
T ss_pred cccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC---CCeE
Confidence 4567889999999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCc-eeeeeE--eecCCCeeEecC-CCcEEEEe
Q 023822 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLL--RVQGRPAAAYDD-QGLVFAVA 179 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~--~~~~~~~~~~~~-~~~~l~~~ 179 (276)
++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||++++ .....+ +...+.+++|+| ++..++++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999987 555555 455678999999 77777777
Q ss_pred e-CCeEEEEecccCCCCCeeeeee-cCCCCCceEEEECC--CCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 180 F-GGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
+ |+.|++||++.... .... ..+...+.+++|+| ++++|++++.||.|++||+.+++.+..+. +|...|.
T Consensus 160 ~~dg~v~vwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~v~ 232 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTP----NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---GHMSNVS 232 (814)
T ss_dssp ETTSEEEEEETTCSSC----SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE---CCSSCEE
T ss_pred eCCCeEEEEECCCCcc----eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc---CCCCCEE
Confidence 7 89999999987554 2222 33447899999999 99999999999999999999999999988 7889999
Q ss_pred EEEECCCCcEEEEecCCCCC
Q 023822 256 EASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 256 ~~~~s~~g~~l~~~~~dg~v 275 (276)
+++|+|++++|++++.||.|
T Consensus 233 ~~~~~~~~~~l~~~~~dg~v 252 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDGTL 252 (814)
T ss_dssp EEEECSSSSEEEEEETTSCE
T ss_pred EEEEcCCCCEEEEEeCCCeE
Confidence 99999999999999999975
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.3e-39 Score=259.59 Aligned_cols=239 Identities=13% Similarity=0.143 Sum_probs=207.5
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEE
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d 107 (276)
+..|.++|++++|+|++++|++++.|+.|++||+.+++ .+..+..|...|.+++|+|+++++++++. |+.|++||
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd 80 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVWT 80 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEEEE
Confidence 45689999999999999999999999999999999887 88889999999999999999999999998 99999999
Q ss_pred ccCCceeee--ecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCcee---eeeE---eecCCCeeEecCCCcEEEEe
Q 023822 108 LHDNKYLRY--FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC---QGLL---RVQGRPAAAYDDQGLVFAVA 179 (276)
Q Consensus 108 ~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~---~~~~~~~~~~~~~~~~l~~~ 179 (276)
+.+++.... +..|...|.+++|+|++++|++++.|+.|++||++..+. ...+ +...+.+++|+|++.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 988875443 467899999999999999999999999999999998763 2222 35567899999999888887
Q ss_pred e-CCeEEEEecccCC--------------CCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEe
Q 023822 180 F-GGYIRMFDARKYE--------------KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (276)
. |+.|++||++... ........+..|...+.+++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 7 8999999975321 011224556678889999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 245 NVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 245 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
. .|..+|.+++|+|++++|++| .||.+
T Consensus 241 ~---~~~~~v~~~~~~~~~~~l~~~-~d~~i 267 (372)
T 1k8k_C 241 A---SETLPLLAVTFITESSLVAAG-HDCFP 267 (372)
T ss_dssp E---CSSCCEEEEEEEETTEEEEEE-TTSSC
T ss_pred c---cCCCCeEEEEEecCCCEEEEE-eCCeE
Confidence 8 688899999999999999888 77654
No 40
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-39 Score=259.48 Aligned_cols=241 Identities=14% Similarity=0.184 Sum_probs=213.9
Q ss_pred hccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
........+.+|.++|++++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|+++++++++. |+
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg 96 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DY 96 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TT
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CC
Confidence 344555678999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred ceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCC-----CeEEEEeccCceeeeeE-------------eec-
Q 023822 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLL-------------RVQ- 162 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~-------------~~~- 162 (276)
.|++||+.+++.+..+. +...+.+++|+|+++++++++.+ +.|++||++.......+ +..
T Consensus 97 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 99999999999988887 88999999999999999999999 99999999876432222 111
Q ss_pred -CCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE
Q 023822 163 -GRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL 240 (276)
Q Consensus 163 -~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 240 (276)
.+.+++|+|++.+++++. |+.|++||+++.. .....+..|...+.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 567899999998888877 8999999998732 22556667888999999999999999999999999999999999
Q ss_pred EEEeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 241 LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+..+. +...+..++|+|+++++++++.++
T Consensus 253 ~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 253 LKKYE----TDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEE----CSSCEEEEEECSSSSEEEEEECCC
T ss_pred eeeec----CCCCceeEEecCCCceEEEeecCC
Confidence 99887 678899999999999999998876
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.4e-40 Score=264.85 Aligned_cols=238 Identities=15% Similarity=0.182 Sum_probs=209.0
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe------eeeeeeeeeeceEEEEEecc----C---CeE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT------CLKTINSKKYGVDLVCFTSH----P---TTV 91 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l 91 (276)
.....+.+|.++|++++|+| ++|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ + ++|
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 44567889999999999998 799999999999999999887 78888899999999999999 9 999
Q ss_pred EEeccCCCCCceEEEEccCCce-----eeeeccc-----CcceEEEEec----cCCCE-EEEeeCCCeEEEEeccC----
Q 023822 92 IYSSKNGWDESLRLLSLHDNKY-----LRYFKGH-----HDRVVSLSLC----SSKDC-FISGSLDRTVLLWDQRA---- 152 (276)
Q Consensus 92 ~~~~~~~~d~~i~~~d~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~d~~i~iwd~~~---- 152 (276)
++++. |+.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||++.
T Consensus 85 ~s~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 85 ATTSF---SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EEEET---TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EEEcC---CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 99998 99999999999887 7888888 5899999999 99999 99999999999999998
Q ss_pred --ceeee-----eE---------eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecC---C---CCCc
Q 023822 153 --EKCQG-----LL---------RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGG---D---ISDA 209 (276)
Q Consensus 153 --~~~~~-----~~---------~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~---~---~~~i 209 (276)
.+.+. .+ +...+.+++|+|++ +++++. |+.|++||+++.+. ...+.. | ...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP----LYNFESQHSMINNSNSI 236 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE----EEEEECCC---CCCCCE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce----eEEEeccccccccCCcc
Confidence 65555 44 35568899999999 777777 89999999987543 455555 7 8899
Q ss_pred eEEEECCCCcEEEEeecC---CcEEEEECCCCcEEEEeecCCC-------------CCCceEEEEECCCCcEEEEecCCC
Q 023822 210 NVVKFSNDGRLMLLTTME---GHIHVLDSFRGTLLSTYNVKPV-------------SRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 210 ~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~-------------~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.+++|+|++++|++++.| |.|++||+.+++.+..+. . |...|.+++|+|++++|++++.||
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 313 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS---VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 313 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC---BC--------CCBSBSSCEEEEEECSSSSEEEEEETTS
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec---cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence 999999999999999999 999999999999999887 5 789999999999999999999998
Q ss_pred CC
Q 023822 274 FS 275 (276)
Q Consensus 274 ~v 275 (276)
.+
T Consensus 314 ~i 315 (397)
T 1sq9_A 314 KL 315 (397)
T ss_dssp EE
T ss_pred eE
Confidence 65
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.3e-39 Score=259.13 Aligned_cols=192 Identities=11% Similarity=0.094 Sum_probs=160.3
Q ss_pred eEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeee
Q 023822 79 VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158 (276)
Q Consensus 79 v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 158 (276)
+.+++|+||++++++++. +.|+.|++||+++++.+..+. |...|.+++|+|+++++++++.+ .+++|+..+++....
T Consensus 136 ~~~v~fSpDg~~la~as~-~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASS-KVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIAR 212 (365)
T ss_dssp EEEEEECTTSSCEEEEES-CSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEEEC-CCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceee
Confidence 678999999999887653 228999999999999888886 78889999999999999999855 566777666655443
Q ss_pred E----eecCCCeeEecCCCcEEEEee-CC----eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCc
Q 023822 159 L----RVQGRPAAAYDDQGLVFAVAF-GG----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 229 (276)
Q Consensus 159 ~----~~~~~~~~~~~~~~~~l~~~~-d~----~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 229 (276)
. +...+..++|+|++.++++++ |+ .++.|++............+..|..+|++++|+|+|++||+|+.|+.
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 3 334467899999998888776 54 68889987755434445567788899999999999999999999999
Q ss_pred EEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 230 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 230 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
|+|||+.+++++..+.. +|..+|++++|+|||++||+||.|++|
T Consensus 293 V~iwd~~~~~~~~~~~~--gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQ--AHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EEEEETTTTEEEEEETT--SSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred EEEEECCCCcEEEEecC--cccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 99999999999987632 799999999999999999999999986
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9e-39 Score=270.42 Aligned_cols=236 Identities=20% Similarity=0.317 Sum_probs=209.2
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
+....+.+|...|.+++|+|+++.|++++.|+.|++||.. ++.+..+..|...+.+++|+|+++.+++++. |+.|+
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---dg~v~ 369 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVK 369 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeC---CCEEE
Confidence 4556788999999999999999999999999999999975 4556778889999999999999999999998 99999
Q ss_pred EEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-C
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-G 181 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d 181 (276)
+||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++....+ +...+.+++|+|++++++++. |
T Consensus 370 ~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 370 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 9995 567788899999999999999999999999999999999964 4555555 555677899999999888887 8
Q ss_pred CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECC
Q 023822 182 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 261 (276)
Q Consensus 182 ~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (276)
+.|++||... + ....+..|...|.+++|+|++++|++++.|+.|++|| .+++++..+. +|...|++++|+|
T Consensus 448 ~~v~~w~~~~-~----~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~---~h~~~v~~l~~s~ 518 (577)
T 2ymu_A 448 KTVKLWNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLT---GHSSSVRGVAFSP 518 (577)
T ss_dssp SEEEEEETTS-C----EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEE---CCSSCEEEEEECT
T ss_pred CEEEEEECCC-C----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEe---CCCCCEEEEEEcC
Confidence 9999999643 2 2456678889999999999999999999999999999 5788888888 7999999999999
Q ss_pred CCcEEEEecCCCCC
Q 023822 262 EGMFVISGRVSPFS 275 (276)
Q Consensus 262 ~g~~l~~~~~dg~v 275 (276)
+|++|++++.||.|
T Consensus 519 dg~~l~s~~~dg~v 532 (577)
T 2ymu_A 519 DGQTIASASDDKTV 532 (577)
T ss_dssp TSSCEEEEETTSEE
T ss_pred CCCEEEEEECcCEE
Confidence 99999999999975
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-39 Score=260.74 Aligned_cols=237 Identities=17% Similarity=0.222 Sum_probs=203.5
Q ss_pred CCCcEEEEEEcCC----CCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEec-cCCeEEEeccCCCCCceEEEE
Q 023822 33 YNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLS 107 (276)
Q Consensus 33 h~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~~~d 107 (276)
|...|++++|+|+ +++|++++.||.|++||+.+++.+..+..|...|.+++|+| ++..+++++. |+.|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK---DHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---TSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---CCeEEEEE
Confidence 6788999999998 67999999999999999999999999999999999999999 8999999998 99999999
Q ss_pred ccCCceeeee---cccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-------------------------
Q 023822 108 LHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL------------------------- 159 (276)
Q Consensus 108 ~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------------------------- 159 (276)
+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (366)
T 3k26_A 145 IQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDF 224 (366)
T ss_dssp TTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSE
T ss_pred eecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcc
Confidence 9999988887 689999999999999999999999999999999977544322
Q ss_pred -----eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCC----------CeeeeeecCCCCCceEEEECCC--CcEE
Q 023822 160 -----RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKG----------PFDIFSVGGDISDANVVKFSND--GRLM 221 (276)
Q Consensus 160 -----~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~----------~~~~~~~~~~~~~i~~~~~~~~--~~~l 221 (276)
+...+.+++|+ +.++++++ |+.|++||+++.... ......+..|...+.+++|+|+ +++|
T Consensus 225 ~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 225 STRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp EECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEE
T ss_pred ccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEE
Confidence 44567788998 44555555 999999999875431 1224556678889999999999 9999
Q ss_pred EEeecCCcEEEEECCCCcEE----EEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 222 LLTTMEGHIHVLDSFRGTLL----STYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 222 ~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
++++.||.|++||+.+++.. ..+..+ .+...|++++|+|++++|++++.||.|
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i 359 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHH-KCGAAIRQTSFSRDSSILIAVCDDASI 359 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCT-TCCSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEecCCcEEEEECCCCCCccccceEEccc-ccCCceEEEEeCCCCCeEEEEeCCCEE
Confidence 99999999999999987643 355521 137999999999999999999999975
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2e-39 Score=262.27 Aligned_cols=244 Identities=13% Similarity=0.139 Sum_probs=211.9
Q ss_pred cccceeeccCCCcEEEEEEcCC----C---CEEEEeecCCeEEEEEccCCee-----eeeeeee-----eeceEEEEEe-
Q 023822 24 MEVGMSFRDYNGRISSMDFHKS----S---SYLVTASDDESIRLYDVTAATC-----LKTINSK-----KYGVDLVCFT- 85 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~----~---~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~- 85 (276)
.+....+.+|..+|.+++|+|+ + ++|++++.||.|++||+.+++. ...+..| ...|.+++|+
T Consensus 52 ~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 131 (397)
T 1sq9_A 52 KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 131 (397)
T ss_dssp GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEEC
T ss_pred CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEee
Confidence 4567788899999999999999 9 9999999999999999998886 7888888 5899999999
Q ss_pred ---ccCCe-EEEeccCCCCCceEEEEccC------Cceee-----ee-------cccCcceEEEEeccCCCEEEEeeCCC
Q 023822 86 ---SHPTT-VIYSSKNGWDESLRLLSLHD------NKYLR-----YF-------KGHHDRVVSLSLCSSKDCFISGSLDR 143 (276)
Q Consensus 86 ---~~~~~-l~~~~~~~~d~~i~~~d~~~------~~~~~-----~~-------~~~~~~i~~~~~~~~~~~l~~~~~d~ 143 (276)
|+++. +++++. |+.|++||+.+ ++.+. .+ ..|...|.+++|+|++ +|++++.|+
T Consensus 132 ~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 207 (397)
T 1sq9_A 132 SNDRLLSHRLVATDV---KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG 207 (397)
T ss_dssp CC----CEEEEEEET---TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS
T ss_pred ccCCCCceEEEEEeC---CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC
Confidence 99999 999988 99999999998 66665 66 4488999999999999 999999999
Q ss_pred eEEEEeccCceeeeeEe--------ecCCCeeEecCCCcEEEEee-C---CeEEEEecccCCCCCeeeeeecC-------
Q 023822 144 TVLLWDQRAEKCQGLLR--------VQGRPAAAYDDQGLVFAVAF-G---GYIRMFDARKYEKGPFDIFSVGG------- 204 (276)
Q Consensus 144 ~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~-d---~~i~~~d~~~~~~~~~~~~~~~~------- 204 (276)
.|++||+++.+.+..+. ...+.+++|+|++.+|+++. | +.|++||+++.+. ...+..
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~----~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER----IGSLSVPTHSSQA 283 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE----EEEECBC------
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc----cceeccCcccccc
Confidence 99999999998888774 34577999999999888887 7 8999999987653 445555
Q ss_pred ------CCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee------cC------------CCCCCceEEEEEC
Q 023822 205 ------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN------VK------------PVSRNSTLEASFS 260 (276)
Q Consensus 205 ------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------~~------------~~~~~~v~~~~~s 260 (276)
|...|.+++|+|++++|++++.||.|++||+.+++.+..+. .+ ..|...|.+++|+
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 363 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEec
Confidence 88899999999999999999999999999999999998887 31 0127899999999
Q ss_pred CCC----------cEEEEecCCCCC
Q 023822 261 PEG----------MFVISGRVSPFS 275 (276)
Q Consensus 261 ~~g----------~~l~~~~~dg~v 275 (276)
|+| ++|++++.||.|
T Consensus 364 ~~g~~~~~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 364 KKGWRSGMGADLNESLCCVCLDRSI 388 (397)
T ss_dssp CTTTSBSTTCTTSCEEEEEETTTEE
T ss_pred cccccccccccccceEEEecCCCcE
Confidence 999 799999999975
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.8e-39 Score=275.68 Aligned_cols=241 Identities=18% Similarity=0.238 Sum_probs=205.2
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEE
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~ 105 (276)
....+.+|...|.+++|+|++++|++|+.|++|++||+.+++....+..|...|.+++|+|+++.+++++. |+.|++
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---D~~i~i 498 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR---DRTIKL 498 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEE
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeC---CCEEEE
Confidence 34678899999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred EEccCCceeee---ecccCcceEEEEeccCC--CEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEE
Q 023822 106 LSLHDNKYLRY---FKGHHDRVVSLSLCSSK--DCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAV 178 (276)
Q Consensus 106 ~d~~~~~~~~~---~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 178 (276)
||+........ ..+|...|.+++|+|++ ..+++++.|++|++||+++.+....+ |...+.+++|+|++.++++
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 99865543322 24688999999999987 58999999999999999999888777 5566889999999999988
Q ss_pred ee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCC---------
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP--------- 248 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--------- 248 (276)
++ |+.|++||+++++. +..+. +...+.+++|+|++.+|++++ ++.|++||+.+++.+..+..+.
T Consensus 579 g~~Dg~i~iwd~~~~~~----~~~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKK----LYSLE-ANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EETTSBCEEEETTTTEE----EECCB-CSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC--------
T ss_pred EeCCCeEEEEECCCCce----EEEec-CCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccc
Confidence 87 99999999987653 33333 446799999999998877765 5669999999999888775211
Q ss_pred -------CCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 249 -------VSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 249 -------~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.+...+++++|+|+|++|++|+.||+|
T Consensus 653 ~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i 686 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVI 686 (694)
T ss_dssp --------CCCCEEEEEECTTSSEEEEEETTSEE
T ss_pred cccccCCceeEEeeeEEEcCCCCEEEEEcCCCeE
Confidence 011237899999999999999999976
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-38 Score=251.67 Aligned_cols=233 Identities=10% Similarity=0.173 Sum_probs=202.3
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeee---ee--eeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT---IN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~---~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
..+|..+|++++|+|++++|++++ ||.|++||+.+++.... +. .|...|.+++|+|+++.+++++. |+.|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~ 122 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLS 122 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC---CCcEE
Confidence 347999999999999999999998 99999999987653332 32 67889999999999999999998 99999
Q ss_pred EEEccCCc--eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee
Q 023822 105 LLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 105 ~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~ 180 (276)
+||+.+++ ....+..|...|.+++|+|+++++++++.|+.|++||+++++....+ +...+.+++|+|++.+++++.
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 202 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG 202 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe
Confidence 99999887 56677889999999999999999999999999999999999888877 455678999999998888877
Q ss_pred -CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEE
Q 023822 181 -GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (276)
Q Consensus 181 -d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (276)
|+.|++||+++.+. ... ..+...+.+++|+|++++|++++.|+.|++||+.+++.. .+. .|...|.+++|
T Consensus 203 ~dg~i~~~d~~~~~~----~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~---~~~~~v~~~~~ 273 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQ----LQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLH---LHESCVLSLKF 273 (337)
T ss_dssp TTSEEEEEETTTTEE----EEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EEC---CCSSCEEEEEE
T ss_pred cCCcEEEEECCCCce----Eee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEc---CCccceeEEEE
Confidence 89999999987553 222 236678999999999999999999999999999988765 344 58899999999
Q ss_pred CCCCcEEEEecCCCCC
Q 023822 260 SPEGMFVISGRVSPFS 275 (276)
Q Consensus 260 s~~g~~l~~~~~dg~v 275 (276)
+|++++|++++.||.+
T Consensus 274 ~~~~~~l~~~~~dg~i 289 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLL 289 (337)
T ss_dssp CTTSSEEEEEETTSEE
T ss_pred CCCCCEEEEecCCCcE
Confidence 9999999999999865
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-38 Score=247.87 Aligned_cols=241 Identities=15% Similarity=0.222 Sum_probs=204.5
Q ss_pred hccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
..++....+.+|.+.|++++| |++++|++++.||.|++||+.+++....+..|...|.+++|+|+++.+++++. |+
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg 81 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK---DT 81 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET---TS
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecC---CC
Confidence 356777889999999999999 99999999999999999999999999999999999999999999999999988 88
Q ss_pred ceEEEEccCC-----------------------------------------ceeeeecccCcceEEEEecc-CCCEEEEe
Q 023822 102 SLRLLSLHDN-----------------------------------------KYLRYFKGHHDRVVSLSLCS-SKDCFISG 139 (276)
Q Consensus 102 ~i~~~d~~~~-----------------------------------------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~ 139 (276)
.|++|++... +....+..|...+.+++|.| ++++++++
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 8888886542 12223446778888999988 88999999
Q ss_pred eCCCeEEEEeccCceeeeeE-eecCCCeeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC
Q 023822 140 SLDRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG 218 (276)
Q Consensus 140 ~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 218 (276)
+.|+.|++||.......... +...+.+++++|++.+++++.|+.|++||+++++. ...+..|..++.+++|+|++
T Consensus 162 ~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 162 SADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV----LRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp ETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEECTTS
T ss_pred ECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh----hhhhhcCCceEEEEEEecCC
Confidence 99999999994433222222 55567899999999966666699999999987653 56667888999999999999
Q ss_pred cEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 219 RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 219 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.|++++.||.|++||+.+++.+..+. .|...|.+++|+|+++ +++++.||.+
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~~i~~~~~~~~~~-~~~~~~dg~i 289 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGSLKQVIT---LPAISIWSVDCMSNGD-IIVGSSDNLV 289 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCCEEEEEE---CSSSCEEEEEECTTSC-EEEEETTSCE
T ss_pred -CEEEEecCCEEEEEECCCCceeEEEe---ccCceEEEEEEccCCC-EEEEeCCCcE
Confidence 58899999999999999999999998 6888999999999998 5568888875
No 49
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-38 Score=251.32 Aligned_cols=241 Identities=15% Similarity=0.151 Sum_probs=211.8
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCC--
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-- 100 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d-- 100 (276)
..+....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+. +...+.+++|+|+++.+++++. +
T Consensus 63 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---~~~ 138 (369)
T 3zwl_B 63 NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILD---NVM 138 (369)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEEC---CBT
T ss_pred CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecC---Ccc
Confidence 346677888999999999999999999999999999999999999888887 7789999999999999999987 7
Q ss_pred ---CceEEEEccCCc-----------eeeeecccCc--ceEEEEeccCCCEEEEeeCCCeEEEEeccC-ceeeeeE--ee
Q 023822 101 ---ESLRLLSLHDNK-----------YLRYFKGHHD--RVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLL--RV 161 (276)
Q Consensus 101 ---~~i~~~d~~~~~-----------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~--~~ 161 (276)
+.|.+||+.... ....+..|.. .+.+++|+|++++|++++.||.|++||+++ .+....+ +.
T Consensus 139 ~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 218 (369)
T 3zwl_B 139 KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE 218 (369)
T ss_dssp TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS
T ss_pred CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC
Confidence 999999998764 3344455665 899999999999999999999999999998 6766666 45
Q ss_pred cCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC------------
Q 023822 162 QGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG------------ 228 (276)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------------ 228 (276)
..+.+++|+|++.+|++++ |+.|++||+++.+. ...+. +...+..++|+|+++++++++.++
T Consensus 219 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 293 (369)
T 3zwl_B 219 KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV----LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEG 293 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEE-CSSCEEEEEECSSSSEEEEEECCC------------
T ss_pred CceeEEEECCCCCEEEEecCCceEEEEECCCCce----eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCC
Confidence 5678999999999888877 89999999987553 22332 667899999999999999999888
Q ss_pred --cEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 229 --HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 229 --~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.+++||..+++.+..+. +|...|.+++|+|++++|++++.||.|
T Consensus 294 ~~~i~~~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg~v 339 (369)
T 3zwl_B 294 KFEARFYHKIFEEEIGRVQ---GHFGPLNTVAISPQGTSYASGGEDGFI 339 (369)
T ss_dssp -CEEEEEETTTCCEEEEEE---CCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred cceeEEEecCCCcchhhee---cccCcEEEEEECCCCCEEEEEcCCCeE
Confidence 89999999999999998 789999999999999999999999975
No 50
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=283.27 Aligned_cols=246 Identities=13% Similarity=0.075 Sum_probs=206.1
Q ss_pred ceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEcc--CCeeeeeeeeeeeceEEEEEecc--CCeEEEeccCCCCCc
Q 023822 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDES 102 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~d~~ 102 (276)
...+.+|.++|++++|+|++++|++|+.||.|++||+. +++....+..|..+|.+++|+|+ ++.+++++. ||.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~---Dg~ 78 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGK 78 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET---TSC
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC---CCe
Confidence 35678999999999999999999999999999999998 56778888999999999999988 899999998 999
Q ss_pred eEEEEccCCc--eeeeecccCcceEEEEeccC--CCEEEEeeCCCeEEEEeccCceeeeeE----eecCCCeeEecC---
Q 023822 103 LRLLSLHDNK--YLRYFKGHHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLL----RVQGRPAAAYDD--- 171 (276)
Q Consensus 103 i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~--- 171 (276)
|++||+.+++ ....+..|...|.+++|+|+ ++++++++.||.|++||++........ +...+.++.|+|
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999999986 67778889999999999999 999999999999999999987433322 455678999999
Q ss_pred ----------CCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCC---CcEEEEeecCCcEEEEECCC
Q 023822 172 ----------QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 172 ----------~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~ 237 (276)
++.++++++ ||.|++||+++..........+..|..+|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 466666666 9999999999865433445567789999999999999 99999999999999999988
Q ss_pred CcEE--EEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 238 GTLL--STYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 238 ~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
++.. ........|...|++++|+|+|++|++|+.||.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE
Confidence 6421 1111222588899999999999999999999975
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-38 Score=254.55 Aligned_cols=232 Identities=16% Similarity=0.224 Sum_probs=203.5
Q ss_pred CCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc-CC
Q 023822 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DN 111 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~-~~ 111 (276)
|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++| ++..+++++. |+.|++||++ ..
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~i~d~~~~~ 207 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR---SGAIHHHDVRIAN 207 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEEEEEETTSSS
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC---CCCEEEEecccCc
Confidence 8899999999999999999999999999999999999999999999999999 5679999998 9999999998 56
Q ss_pred ceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCC-cEEEEee---CCeEE
Q 023822 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAF---GGYIR 185 (276)
Q Consensus 112 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~-~~l~~~~---d~~i~ 185 (276)
.....+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ +...+.+++|+|++ .+++++. |+.|+
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 208 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 677888899999999999999999999999999999999998888777 55678899999966 5666654 89999
Q ss_pred EEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEE--eecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCC
Q 023822 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL--TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263 (276)
Q Consensus 186 ~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 263 (276)
+||+++++. ...+ .+...+.+++|+|+++++++ |+.||.|++||+.+++........ +|...|.+++|+|+|
T Consensus 288 i~d~~~~~~----~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 288 FWNAATGAR----VNTV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDG 361 (401)
T ss_dssp EEETTTCCE----EEEE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTS
T ss_pred EEECCCCCE----EEEE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCC
Confidence 999987553 3333 35568999999999999999 458999999999987666553322 688999999999999
Q ss_pred cEEEEecCCCCC
Q 023822 264 MFVISGRVSPFS 275 (276)
Q Consensus 264 ~~l~~~~~dg~v 275 (276)
++|++++.||.+
T Consensus 362 ~~l~s~~~dg~i 373 (401)
T 4aez_A 362 RILSTAASDENL 373 (401)
T ss_dssp SEEEEECTTSEE
T ss_pred CEEEEEeCCCcE
Confidence 999999999975
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.9e-39 Score=260.43 Aligned_cols=237 Identities=14% Similarity=0.165 Sum_probs=203.8
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
.+..| ..+....|+|++++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++. |+.|++||+
T Consensus 93 ~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~ 168 (420)
T 3vl1_A 93 MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ---DMQLKIWSV 168 (420)
T ss_dssp TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET---TSEEEEEET
T ss_pred EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC---CCeEEEEeC
Confidence 34444 44555678999999999999999999999999998888899999999999999999999998 999999999
Q ss_pred cCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee--------------------------c
Q 023822 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--------------------------Q 162 (276)
Q Consensus 109 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------------------------~ 162 (276)
.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+.. .
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 99999999999999999999999999999999999999999999988877742 4
Q ss_pred CCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCc-EEEEeecCCcEEEEECCCCcE
Q 023822 163 GRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTL 240 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 240 (276)
.+..++|+|++++++++. |+.|++||+++.+. .......|...+.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ---TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE---EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCce---eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 456778899998888887 89999999987553 1222345778999999999998 999999999999999998754
Q ss_pred -EEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 241 -LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 241 -~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+..+.. .+...+..+.| +++++|++++.||.+
T Consensus 326 ~~~~~~~--~~~~~v~~~~~-~~~~~l~s~~~d~~v 358 (420)
T 3vl1_A 326 PVGEFLI--NEGTPINNVYF-AAGALFVSSGFDTSI 358 (420)
T ss_dssp CSEEEEE--STTSCEEEEEE-ETTEEEEEETTTEEE
T ss_pred chhhhhc--cCCCCceEEEe-CCCCEEEEecCCccE
Confidence 666663 26677888855 578999999999875
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-38 Score=255.20 Aligned_cols=246 Identities=14% Similarity=0.156 Sum_probs=200.1
Q ss_pred hccccceeeccCCCcEEEEEEcCCC-CEEEEeecCCeEEEEEccCCeeeeeee--eeeeceEEEEEec-cCCeEEEeccC
Q 023822 22 QSMEVGMSFRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTS-HPTTVIYSSKN 97 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~~ 97 (276)
..++....+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+. .|...|.+++|+| +++.+++++.
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~- 139 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI- 139 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-
Confidence 4566778889999999999999998 999999999999999999887776665 5889999999999 7789999988
Q ss_pred CCCCceEEEEccCCceeeeecc---cCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCC
Q 023822 98 GWDESLRLLSLHDNKYLRYFKG---HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQ 172 (276)
Q Consensus 98 ~~d~~i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~ 172 (276)
|+.|++||+.+ +....+.. |...|.+++|+|++++|++++.|+.|++||++ ++....+ +...+.+++|+|+
T Consensus 140 --d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 140 --RGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp --TTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSS
T ss_pred --CCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCC
Confidence 99999999986 44555543 34789999999999999999999999999995 5555555 5566889999999
Q ss_pred Cc-EEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECC-CCcEEEEeecCCcEEEEECCCCcEEEEeecCC-
Q 023822 173 GL-VFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP- 248 (276)
Q Consensus 173 ~~-~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~- 248 (276)
+. ++++++ |+.|++||+++.+......... .|...+.+++|+| ++++|++++.|+.|++||+.+++.+..+..+.
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCB
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccc
Confidence 97 777666 9999999999855332223333 5888999999999 99999999999999999999988777665321
Q ss_pred ---CCC----------CceEEEEECCCCcEEEEecCCCCC
Q 023822 249 ---VSR----------NSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 249 ---~~~----------~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.+. ..+..++|+|+|++ +++.||.|
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i 332 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTI 332 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCE
T ss_pred cccccccceEEeccCCCCceEEEecCCccc--ccCCCCeE
Confidence 112 33445666777666 77788765
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=258.86 Aligned_cols=242 Identities=15% Similarity=0.217 Sum_probs=212.1
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeec---------------eEEEEEecc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYG---------------VDLVCFTSH 87 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------------v~~~~~~~~ 87 (276)
..+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+... +.++.|+++
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (425)
T 1r5m_A 138 TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD 217 (425)
T ss_dssp TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence 34566778899999999999999999999999999999999999999888877766 999999987
Q ss_pred CCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCC
Q 023822 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRP 165 (276)
Q Consensus 88 ~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~ 165 (276)
+ .+++++. ++.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++....+ +...+.
T Consensus 218 ~-~~~~~~~---~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 293 (425)
T 1r5m_A 218 D-KFVIPGP---KGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIV 293 (425)
T ss_dssp T-EEEEECG---GGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEE
T ss_pred C-EEEEEcC---CCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEE
Confidence 5 4677776 999999999999999999999999999999999999999999999999999998877777 455678
Q ss_pred eeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCc------
Q 023822 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT------ 239 (276)
Q Consensus 166 ~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------ 239 (276)
+++|+|++.+++++.|+.|++||+++.+. ...+..|...+.+++|+|++++|++++.||.|++||+.+++
T Consensus 294 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 369 (425)
T 1r5m_A 294 SASWVGDDKVISCSMDGSVRLWSLKQNTL----LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSL 369 (425)
T ss_dssp EEEEETTTEEEEEETTSEEEEEETTTTEE----EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-----
T ss_pred EEEECCCCEEEEEeCCCcEEEEECCCCcE----eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeee
Confidence 99999999444444599999999987553 55566788899999999999999999999999999999888
Q ss_pred --------------EEEEeecCCCCCC--ceEEEEECCCCcEEEEecCCCCC
Q 023822 240 --------------LLSTYNVKPVSRN--STLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 240 --------------~~~~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.+..+. .|.. .|.+++|+|++++|++++.||.|
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 370 YGNRDGILNPLPIPLYASYQ---SSQDNDYIFDLSWNCAGNKISVAYSLQEG 418 (425)
T ss_dssp ---------CEECCEEEEEC---CTTCCCCEEEEEECTTSSEEEEEESSSCC
T ss_pred ecccccccCcccchhhhhhc---CcccCCceEEEEccCCCceEEEEecCceE
Confidence 777777 5655 99999999999999999999976
No 55
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-39 Score=261.52 Aligned_cols=235 Identities=16% Similarity=0.242 Sum_probs=207.0
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccC----CeeeeeeeeeeeceEEEEEecc-CCeEEEeccCCCCCceEEE
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~d~~i~~~ 106 (276)
.|...|++++|+|++++|++++.||.|++||+.+ .+.+..+..|...|.+++|+|+ +..+++++. |+.|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEEE
Confidence 5889999999999999999999999999999987 4578888899999999999998 889999988 9999999
Q ss_pred EccCCc------eee---eecccCcceEEEEeccC-CCEEEEeeCCCeEEEEeccCceeeeeEe--------ecCCCeeE
Q 023822 107 SLHDNK------YLR---YFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLR--------VQGRPAAA 168 (276)
Q Consensus 107 d~~~~~------~~~---~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~~ 168 (276)
|+.+++ ... .+..|...|.+++|+|+ +.+|++++.|+.|++||+++++....+. ...+.+++
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 999876 333 23678999999999999 7899999999999999999998888773 45577999
Q ss_pred ecCCC-cEEEEee-CC---eEEEEecccCCCCCeeeeeec-CCCCCceEEEECC-CCcEEEEeecCCcEEEEECCCCcEE
Q 023822 169 YDDQG-LVFAVAF-GG---YIRMFDARKYEKGPFDIFSVG-GDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLL 241 (276)
Q Consensus 169 ~~~~~-~~l~~~~-d~---~i~~~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~ 241 (276)
|+|++ .+++++. |+ .|++||+++.... ...+. .|...|.+++|+| ++++|++++.||.|++||+.+++.+
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNANTP---LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 99997 5666666 67 9999999985421 33445 6888999999999 8999999999999999999999999
Q ss_pred EEeecCCCCCCceEEEEECCCC-cEEEEecCCCCC
Q 023822 242 STYNVKPVSRNSTLEASFSPEG-MFVISGRVSPFS 275 (276)
Q Consensus 242 ~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v 275 (276)
..+. .|...|.+++|+|++ .+|++++.||.|
T Consensus 299 ~~~~---~~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 299 SQFP---ARGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp EEEE---CSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred eeec---CCCCceEEEEECCCCCCEEEEEecCCcE
Confidence 9998 788999999999999 899999999875
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-39 Score=268.21 Aligned_cols=240 Identities=11% Similarity=0.107 Sum_probs=194.0
Q ss_pred eeeccCCCcEEEEEEcCC------CCEEEEeecCCeEEEEEccCCee-----------eeeeeeeeeceEEEEEeccCCe
Q 023822 28 MSFRDYNGRISSMDFHKS------SSYLVTASDDESIRLYDVTAATC-----------LKTINSKKYGVDLVCFTSHPTT 90 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~------~~~l~~~~~d~~i~iwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~ 90 (276)
..+.+|.+.|.+++|+|+ +.+||+++.||+|++||+.+++. ...+..|...|.+++|+++ ..
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TT 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-Ce
Confidence 446778899999999996 57999999999999999986632 2356778889999999986 47
Q ss_pred EEEeccCCCCCceEEEEccCCc-eeeeecccCcceEEE--EeccCC-CEEEEeeCCCeEEEEeccCceeeeeEee--c--
Q 023822 91 VIYSSKNGWDESLRLLSLHDNK-YLRYFKGHHDRVVSL--SLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRV--Q-- 162 (276)
Q Consensus 91 l~~~~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~-- 162 (276)
|++++. ||+|++||+++++ +...+.+|...|.++ +|+|++ ++|++++.|++|++||++++++...+.. .
T Consensus 280 lasgs~---DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 280 VVCGFK---NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEEEET---TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred EEEEeC---CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 899988 9999999998764 455688999999999 578887 8999999999999999999877666532 2
Q ss_pred CCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC---
Q 023822 163 GRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG--- 238 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--- 238 (276)
.+.+++|+|++..++++. |+.|++||++.+.. ...+.+|...|++++|+|+|++|++|+.||+|++||+..+
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~----~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~ 432 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFA----VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLH 432 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTC----CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTT
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECccccc----ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhcc
Confidence 367899999998777766 89999999998654 4455679999999999999999999999999999985321
Q ss_pred --c---------EEEEe---------------------------ecCCCCCCceEEEEECCCCc---EEEEecCCCCC
Q 023822 239 --T---------LLSTY---------------------------NVKPVSRNSTLEASFSPEGM---FVISGRVSPFS 275 (276)
Q Consensus 239 --~---------~~~~~---------------------------~~~~~~~~~v~~~~~s~~g~---~l~~~~~dg~v 275 (276)
+ .+..+ ....+|...|.+++|+|++. +||+|+.||+|
T Consensus 433 ~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~v 510 (524)
T 2j04_B 433 GIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLL 510 (524)
T ss_dssp CC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEE
T ss_pred ccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceE
Confidence 0 01001 00114778899999999964 99999999986
No 57
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-38 Score=252.81 Aligned_cols=203 Identities=20% Similarity=0.272 Sum_probs=184.6
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEec--cCCeEEEeccCCCCCc
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDES 102 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d~~ 102 (276)
.....+.+|.+.|.+++|+|++..|++++.|++|++||+++++++..+.+|...|.++.|+| +++.+++++. |+.
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~---Dg~ 221 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGC---DKK 221 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEET---TSC
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeC---CCe
Confidence 44566788999999999999999999999999999999999999999999999999999988 4679999998 999
Q ss_pred eEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee----cCCCeeEecCCCcEEEE
Q 023822 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----QGRPAAAYDDQGLVFAV 178 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 178 (276)
|++||+++++++..+..|...|.+++|+|++++|++++.|++|++||++..+....+.. ..+.+++|+|++.++++
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999887766632 24568999999999988
Q ss_pred ee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEE
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 234 (276)
+. |+.|++||+.+++. ...+.+|...|.+++|+|+|++|++|+.||.|++|+
T Consensus 302 g~~d~~i~vwd~~~~~~----~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSR----VSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EETTSCEEEEETTTCSE----EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCcEEEEECCCCce----EEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 88 89999999987653 556778999999999999999999999999999996
No 58
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2e-38 Score=251.48 Aligned_cols=241 Identities=12% Similarity=0.063 Sum_probs=203.7
Q ss_pred ceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe---eeeeeeeeeeceEEEEEeccCC-eEEEeccCCCCCc
Q 023822 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPT-TVIYSSKNGWDES 102 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~d~~ 102 (276)
.....+|.+.|++++|+|++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|+++ .+++++. |+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~ 80 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---QGE 80 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---TSC
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---CCe
Confidence 34456899999999999999999999999999999998776 3455668889999999999999 9999998 999
Q ss_pred eEEEEc-cCCceeeeecc--cCcceEEEEeccCCCEEEEeeCCCeEEEEeccC---------ceeeeeE-eecCCCeeEe
Q 023822 103 LRLLSL-HDNKYLRYFKG--HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA---------EKCQGLL-RVQGRPAAAY 169 (276)
Q Consensus 103 i~~~d~-~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~-~~~~~~~~~~ 169 (276)
|++||+ .+++. ..+.. |...|.+++|+| +++|++++.|+.|++||+++ .+++..+ +...+.+++|
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 999999 77754 67788 999999999999 99999999999999999997 6655555 4556778999
Q ss_pred cCCCcEEEEeeCCeEEEEeccc-CCCCCeeeeeecCCCCCceEEEECC-CCcEEEEeecCCcEEEEECCCC------cEE
Q 023822 170 DDQGLVFAVAFGGYIRMFDARK-YEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRG------TLL 241 (276)
Q Consensus 170 ~~~~~~l~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~ 241 (276)
+|++ +++++.|+.|++||++. ..... ......+...+.+++|+| +++++++++.||.|++|++... +..
T Consensus 159 ~~~~-l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 159 NSSR-LIVGMNNSQVQWFRLPLCEDDNG--TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp CSSE-EEEEESTTEEEEEESSCCTTCCC--EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred cCCc-EEEEeCCCeEEEEECCccccccc--eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 9988 66666699999999987 54321 233446777899999999 9999999999999999999887 777
Q ss_pred EEeecCCC------CCCceEEEEECCCCcEEEEecCCCCC
Q 023822 242 STYNVKPV------SRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 242 ~~~~~~~~------~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
..+..+.. |...|.+++|+|++++|++++.||.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCE
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceE
Confidence 77773211 23499999999999999999999975
No 59
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.2e-38 Score=251.36 Aligned_cols=202 Identities=17% Similarity=0.292 Sum_probs=184.5
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
+....+.+|.+.|.++.|++++. +++++.|++|++||+.+++.+..+..|...|.+++|+|+++.+++++. |+.|+
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~---d~~v~ 209 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC---DASAK 209 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEE
T ss_pred eeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC---CCcEE
Confidence 44567889999999999998764 889999999999999999999999999999999999999999999998 99999
Q ss_pred EEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee----cCCCeeEecCCCcEEEEee
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----QGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~ 180 (276)
+||+++++....+.+|...|.+++|+|++++|++++.|++|++||+++.+....+.. ..+.+++|+|++.++++++
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC
Confidence 999999999999999999999999999999999999999999999999887776632 2467899999999998888
Q ss_pred -CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEE
Q 023822 181 -GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234 (276)
Q Consensus 181 -d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 234 (276)
|+.|++||+.+.+. ...+.+|..+|.+++|+|+|++|++|+.|+.|++||
T Consensus 290 ~d~~i~vwd~~~~~~----~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 290 DDFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTSEEEEEETTTCCE----EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCeEEEEEcccCcE----eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 89999999987553 556778999999999999999999999999999997
No 60
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.8e-38 Score=256.33 Aligned_cols=240 Identities=11% Similarity=0.163 Sum_probs=205.3
Q ss_pred ccceeeccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccCC-------eeeeeeeeeeeceEEEEEeccC-CeEEEec
Q 023822 25 EVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHP-TTVIYSS 95 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~ 95 (276)
+....+.+|.+.|++++|+| ++++|++|+.||.|++||+.++ +++..+..|...|.+++|+|++ ..+++++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 151 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG 151 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc
Confidence 34556789999999999999 9999999999999999999987 5678888999999999999998 6888888
Q ss_pred cCCCCCceEEEEccCCceeeee--cccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-eec---CCCeeEe
Q 023822 96 KNGWDESLRLLSLHDNKYLRYF--KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQ---GRPAAAY 169 (276)
Q Consensus 96 ~~~~d~~i~~~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~---~~~~~~~ 169 (276)
. |+.|++||+++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..+ .+..+.|
T Consensus 152 ~---dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 152 C---DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp T---TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred C---CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 8 999999999999999998 889999999999999999999999999999999999888776 222 2678999
Q ss_pred cCCCcEEEEe----eCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEE-eecCCcEEEEECCCCcE-EEE
Q 023822 170 DDQGLVFAVA----FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFRGTL-LST 243 (276)
Q Consensus 170 ~~~~~~l~~~----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~-~~~ 243 (276)
+|++.+++++ .|+.|++||+++.+.. .... ...+...+.+++|+|++++|++ ++.||.|++||+.+++. +..
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~~~~-~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEP-LSLQ-ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHY 306 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSC-SEEE-ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEE
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCC-ceEE-eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEe
Confidence 9999999998 4899999999986542 2222 2345678999999999999865 55799999999998884 555
Q ss_pred eecCCCCCCceEEEEECCCCcEEEEec
Q 023822 244 YNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 244 ~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
+..+. +...|.+++|+|++.++++++
T Consensus 307 l~~~~-~~~~v~~~~~sp~~~~~~s~~ 332 (402)
T 2aq5_A 307 LSMFS-SKESQRGMGYMPKRGLEVNKC 332 (402)
T ss_dssp EEEEC-CSSCCSEEEECCGGGSCGGGT
T ss_pred ecccc-cCCcccceEEecccccceecc
Confidence 54332 678999999999999887644
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=253.48 Aligned_cols=244 Identities=17% Similarity=0.206 Sum_probs=205.1
Q ss_pred ccceeeccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccCCeeeeeee-------------eeeeceEEEEEec-cCC
Q 023822 25 EVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTIN-------------SKKYGVDLVCFTS-HPT 89 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~ 89 (276)
+....+.+|.++|++++|+| ++++|++++.||.|++||+.+++....+. .|...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 45566788999999999999 99999999999999999999876655543 4888999999999 777
Q ss_pred eEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCC---CEEEEeeCCCeEEEEeccCceeeeeE--eecCC
Q 023822 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISGSLDRTVLLWDQRAEKCQGLL--RVQGR 164 (276)
Q Consensus 90 ~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~ 164 (276)
.+++++. |+.|++||+.+++....+. +...+.++.|+|.+ .++++++.|+.|++||+++++....+ +...+
T Consensus 114 ~l~s~~~---d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 114 MFTSSSF---DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp CEEEEET---TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE
T ss_pred EEEEEeC---CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE
Confidence 8999988 9999999999998887776 78889999999854 49999999999999999998887777 45567
Q ss_pred CeeEecCCCc-EEEEee-CCeEEEEecccCCCCCee------------eeeecCCCCCceEEEECCCCcEEEEeecCCcE
Q 023822 165 PAAAYDDQGL-VFAVAF-GGYIRMFDARKYEKGPFD------------IFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 230 (276)
Q Consensus 165 ~~~~~~~~~~-~l~~~~-d~~i~~~d~~~~~~~~~~------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 230 (276)
.+++|+|++. +++++. |+.|++||++........ ......|...|.+++|+|++++|++++.||.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 8999999987 465555 999999999876522111 11124677899999999999999999999999
Q ss_pred EEEECCCCcE-----------------------------------------------EEEeecCCCCCCceEEEEECCCC
Q 023822 231 HVLDSFRGTL-----------------------------------------------LSTYNVKPVSRNSTLEASFSPEG 263 (276)
Q Consensus 231 ~i~d~~~~~~-----------------------------------------------~~~~~~~~~~~~~v~~~~~s~~g 263 (276)
++||+.+++. +..+. +|...|.+++|+|++
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK---GHYKTVDCCVFQSNF 346 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC---CCSSCEEEEEEETTT
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec---cCCCeEEEEEEcCCC
Confidence 9999876543 33334 688999999999999
Q ss_pred cEEEEecCCCCC
Q 023822 264 MFVISGRVSPFS 275 (276)
Q Consensus 264 ~~l~~~~~dg~v 275 (276)
++|++++.||.+
T Consensus 347 ~~l~s~~~dg~i 358 (408)
T 4a11_B 347 QELYSGSRDCNI 358 (408)
T ss_dssp TEEEEEETTSCE
T ss_pred CEEEEECCCCeE
Confidence 999999999975
No 62
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=9.1e-38 Score=254.67 Aligned_cols=236 Identities=16% Similarity=0.196 Sum_probs=201.6
Q ss_pred ceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
...+.+|...|++++|+|+|++||+|+.||+|++||+++++++..+..|...+.++.+ ++..+++++. |+.+++|
T Consensus 140 ~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~---d~~i~~~ 214 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSR---SGHIHHH 214 (420)
T ss_dssp EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEEEEE
T ss_pred EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeC---CCceeEe
Confidence 3445678899999999999999999999999999999999999999999999988877 5778999988 9999999
Q ss_pred EccCC-ceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee----eeE--eecCCCeeEecCCC-cEEEE
Q 023822 107 SLHDN-KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ----GLL--RVQGRPAAAYDDQG-LVFAV 178 (276)
Q Consensus 107 d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~--~~~~~~~~~~~~~~-~~l~~ 178 (276)
|.... ..+..+.+|...+..+.|+|+++++++++.|+.+++||...++.. ... +...+..++|+|.+ .++++
T Consensus 215 d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 215 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEE
T ss_pred eecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEE
Confidence 98765 456778899999999999999999999999999999999876532 222 44557789999865 45544
Q ss_pred e--e-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee--cCCcEEEEECCCCcEEEEeecCCCCCCc
Q 023822 179 A--F-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNS 253 (276)
Q Consensus 179 ~--~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (276)
+ + |+.|++||+++++. ...+. +...+.++.|+|+++.+++++ .|+.|+|||+.+++++..+. +|.+.
T Consensus 295 ~~gs~D~~I~iwd~~t~~~----~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~---gH~~~ 366 (420)
T 4gga_A 295 GGGTSDRHIRIWNVCSGAC----LSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GHTSR 366 (420)
T ss_dssp EECTTTCEEEEEETTTTEE----EEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CCSSC
T ss_pred EeecCCCEEEEEeCCcccc----ceeec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc---CCCCC
Confidence 3 2 89999999988653 33333 345789999999999888765 78999999999999999998 89999
Q ss_pred eEEEEECCCCcEEEEecCCCCC
Q 023822 254 TLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 254 v~~~~~s~~g~~l~~~~~dg~v 275 (276)
|++++|+|||++|++|+.||+|
T Consensus 367 V~~l~~spdg~~l~S~s~D~tv 388 (420)
T 4gga_A 367 VLSLTMSPDGATVASAAADETL 388 (420)
T ss_dssp EEEEEECTTSSCEEEEETTTEE
T ss_pred EEEEEEcCCCCEEEEEecCCeE
Confidence 9999999999999999999976
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-38 Score=256.69 Aligned_cols=234 Identities=15% Similarity=0.200 Sum_probs=203.6
Q ss_pred eccCCCcEEEEEEcCCCC-EEEEeecCCeEEEEEc----cCCe------eeeeeee----------eeeceEEEEEeccC
Q 023822 30 FRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDV----TAAT------CLKTINS----------KKYGVDLVCFTSHP 88 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~ 88 (276)
...|.++|++++|+|+++ +||+++.||.|++|++ .+++ ....+.. |...|.+++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 345669999999999999 9999999999999999 8877 4555544 67799999999999
Q ss_pred CeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--ecC---
Q 023822 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQG--- 163 (276)
Q Consensus 89 ~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~--- 163 (276)
++|++++. |+.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++....+. ...
T Consensus 121 ~~l~~~~~---dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 196 (425)
T 1r5m_A 121 NSIVTGVE---NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSS 196 (425)
T ss_dssp SEEEEEET---TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------
T ss_pred CEEEEEeC---CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccc
Confidence 99999998 99999999 6778888899999999999999999999999999999999999998887772 222
Q ss_pred ------------CCeeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEE
Q 023822 164 ------------RPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIH 231 (276)
Q Consensus 164 ------------~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 231 (276)
+.++.|+|++.+++++.++.|++||++..+. ...+..|...+.+++|+|++++|++++.|+.|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP----TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp ---------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC----SEEECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred eeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce----eeeeccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 7789999999888888899999999998654 455667888999999999999999999999999
Q ss_pred EEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 232 VLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 232 i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+||+.+++.+..+. .|...|.+++|+|++ +|++++.||.+
T Consensus 273 i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~-~l~~~~~d~~i 312 (425)
T 1r5m_A 273 IWHGGNGNSQNCFY---GHSQSIVSASWVGDD-KVISCSMDGSV 312 (425)
T ss_dssp EECSSSBSCSEEEC---CCSSCEEEEEEETTT-EEEEEETTSEE
T ss_pred EEECCCCccceEec---CCCccEEEEEECCCC-EEEEEeCCCcE
Confidence 99999999988887 688999999999999 99999999865
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=254.13 Aligned_cols=238 Identities=13% Similarity=0.143 Sum_probs=202.2
Q ss_pred cCCCcEEEEEEcCC---CCEEEEeecCCeEEEEEccCCe-eeeeeeeeeeceEEEEE------eccCCeEEEeccCCCCC
Q 023822 32 DYNGRISSMDFHKS---SSYLVTASDDESIRLYDVTAAT-CLKTINSKKYGVDLVCF------TSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 32 ~h~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~~~~d~ 101 (276)
+|..+|.+++|+|+ +++|++++.||.|++||+.+++ .+..+..|...|.++.| +|+++.+++++. |+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---d~ 139 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---DG 139 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET---TS
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC---CC
Confidence 78999999999998 6999999999999999999888 88889999999999965 678999999998 99
Q ss_pred ceEEEEccCCc-eeeeecccCc----ceEEEE----eccCCCEEEEeeCCCeEEEEeccCceeeeeE-eecCCCeeEecC
Q 023822 102 SLRLLSLHDNK-YLRYFKGHHD----RVVSLS----LCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQGRPAAAYDD 171 (276)
Q Consensus 102 ~i~~~d~~~~~-~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~ 171 (276)
.|++||+++++ ....+..|.+ .+.+++ |+|+++++++++.|+.|++||+++++..... +...+.+++|+|
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDR 219 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESC
T ss_pred eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCC
Confidence 99999999887 6777766554 788888 7889999999999999999999998876555 556788999999
Q ss_pred ---CCcEEEEee-CCeEEEEecccCCCCCe-eeeeecCCCCCceEEEECCCCc-EEEEeecCCcEEEEECCCC-------
Q 023822 172 ---QGLVFAVAF-GGYIRMFDARKYEKGPF-DIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRG------- 238 (276)
Q Consensus 172 ---~~~~l~~~~-d~~i~~~d~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~------- 238 (276)
++.+++++. |+.|++||+++.+.... .......|...|.+++|+|+++ +|++++.||.|++||+.++
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 787777777 89999999988654221 1223447889999999999998 8999999999999998754
Q ss_pred ------------cEEEEeecCCCCCCceEEEEECCCCcEEE-EecCCCCC
Q 023822 239 ------------TLLSTYNVKPVSRNSTLEASFSPEGMFVI-SGRVSPFS 275 (276)
Q Consensus 239 ------------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~dg~v 275 (276)
+.+..+. +|...|.+++|+|++++|+ +++.||.+
T Consensus 300 ~~g~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~s~~~d~~i 346 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVT---LSTQPISSLDWSPDKRGLCVCSSFDQTV 346 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEE---CCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred CCCCccccccccceeeccc---cCCCCeeEEEEcCCCCeEEEEecCCCcE
Confidence 3455555 6899999999999999998 89999875
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-37 Score=284.32 Aligned_cols=243 Identities=14% Similarity=0.221 Sum_probs=218.1
Q ss_pred ceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
...+.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|+++++++++. |+.|++|
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA---DKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEE
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC---CCeEEEE
Confidence 4467899999999999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EccCCceeeeecccCcceEEEEecc--CCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-C
Q 023822 107 SLHDNKYLRYFKGHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-G 181 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d 181 (276)
|+.+++.+..+.+|...|.+++|+| ++.++++++.|+.|++||++++++...+ +...+.+++|+|++.++++++ |
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 9999999999999999999999999 4558999999999999999999988877 556688999999998888887 8
Q ss_pred CeEEEEecccCCCCC---------------------------------------------------eeeeeecCCCCCce
Q 023822 182 GYIRMFDARKYEKGP---------------------------------------------------FDIFSVGGDISDAN 210 (276)
Q Consensus 182 ~~i~~~d~~~~~~~~---------------------------------------------------~~~~~~~~~~~~i~ 210 (276)
+.|++||+++.+... ........|...+.
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 999999987653100 00011125778899
Q ss_pred EEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 211 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+++|+|+++++++++.||.|++||+.++..+..+. +|...|.+++|+|+|++|++++.||.+
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~h~~~v~~v~~spdg~~l~s~s~dg~v 906 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR---GHLSWVHGVMFSPDGSSFLTASDDQTI 906 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC---CCccceEEEEECCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999999888 799999999999999999999999975
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=260.80 Aligned_cols=236 Identities=19% Similarity=0.284 Sum_probs=192.5
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe-----------eeeeeeeee------------eceEEEEEeccC
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-----------CLKTINSKK------------YGVDLVCFTSHP 88 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 88 (276)
.|.+.|++++|+|++++||+|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 367899999999999999999999999999998776 577888887 889999999998
Q ss_pred --CeEEEeccCCCCCceEEEEccCCcee---------------------------------------ee-ecccCcceEE
Q 023822 89 --TTVIYSSKNGWDESLRLLSLHDNKYL---------------------------------------RY-FKGHHDRVVS 126 (276)
Q Consensus 89 --~~l~~~~~~~~d~~i~~~d~~~~~~~---------------------------------------~~-~~~~~~~i~~ 126 (276)
..+++++. |+.|++||+.+++.. .. ..+|...|.+
T Consensus 106 ~~~~l~s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 106 NAAQFLLSTN---DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp SSSEEEEEEC---SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CcceEEEeCC---CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 78999988 999999999764432 12 3679999999
Q ss_pred EEeccCCCEEEEeeCCCeEEEEeccC-ceeeee-------E--eecCCCeeEecCCC-cEEEEee-CCeEEEEecccCCC
Q 023822 127 LSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGL-------L--RVQGRPAAAYDDQG-LVFAVAF-GGYIRMFDARKYEK 194 (276)
Q Consensus 127 ~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~-------~--~~~~~~~~~~~~~~-~~l~~~~-d~~i~~~d~~~~~~ 194 (276)
++|+|++++|+++ .|+.|++||++. .+.... + +...+.+++|+|++ .++++++ |+.|++||+++.+.
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999999999998 799999999994 444432 1 44557899999998 7777777 99999999998663
Q ss_pred CCeeeeeecCCCC------------CceEEEECCCCcEEEEeecCCcEEEEECCC-CcEEEEeecCCCCCCc--------
Q 023822 195 GPFDIFSVGGDIS------------DANVVKFSNDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNS-------- 253 (276)
Q Consensus 195 ~~~~~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~-------- 253 (276)
.......+..|.. .|.+++|+|+|++|++++. +.|++||+.+ ++++..+. +|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~---~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ---VHEYLRSKLCSLY 337 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE---SCGGGTTTHHHHH
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee---ccccccccccccc
Confidence 2222344455554 8999999999999999998 9999999997 88888887 45321
Q ss_pred -------eEEEEECCCCcEEEEecCCCCC
Q 023822 254 -------TLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 254 -------v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+..++|+|++++|++|+.||.|
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v 366 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFF 366 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEE
T ss_pred cccccccceEEEECCCCCEEEEeccCCEE
Confidence 3348999999999999999975
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.5e-38 Score=250.51 Aligned_cols=244 Identities=13% Similarity=0.089 Sum_probs=203.8
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeee--eeeeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI--NSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
++....+.+|...|.+++|+|++++|++++.||.|++||+.+++....+ ..|...|.+++|+|+++++++++. |+
T Consensus 42 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~ 118 (372)
T 1k8k_C 42 WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG---SR 118 (372)
T ss_dssp EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET---TS
T ss_pred EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC---CC
Confidence 3467788899999999999999999999999999999999988755443 568889999999999999999998 99
Q ss_pred ceEEEEccCCce----eeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEecc------------------CceeeeeE
Q 023822 102 SLRLLSLHDNKY----LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR------------------AEKCQGLL 159 (276)
Q Consensus 102 ~i~~~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~------------------~~~~~~~~ 159 (276)
.|++||++.++. ......|...|.+++|+|++++|++++.|+.|++||++ .++....+
T Consensus 119 ~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 119 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 999999998763 23336789999999999999999999999999999964 45566555
Q ss_pred --eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 160 --RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 160 --~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
+...+.+++|+|++.+++++. |+.|++||+++++. ...+..|..++.+++|+|++++|+++ .|+.|++|++.
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA----VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE----EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce----eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEcc
Confidence 445678999999998888777 89999999998654 55666788899999999999988877 89999999998
Q ss_pred C--CcEEE--E----------------------------------eecCCCCCCceEEEEEC-CCC---cEEEEecCCCC
Q 023822 237 R--GTLLS--T----------------------------------YNVKPVSRNSTLEASFS-PEG---MFVISGRVSPF 274 (276)
Q Consensus 237 ~--~~~~~--~----------------------------------~~~~~~~~~~v~~~~~s-~~g---~~l~~~~~dg~ 274 (276)
+ ++... . .....+|...|++++|. ++| ++|++|+.||.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~ 353 (372)
T 1k8k_C 274 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG 353 (372)
T ss_dssp TTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSE
T ss_pred CcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCc
Confidence 7 43100 0 11112688999999966 677 99999999997
Q ss_pred C
Q 023822 275 S 275 (276)
Q Consensus 275 v 275 (276)
|
T Consensus 354 i 354 (372)
T 1k8k_C 354 M 354 (372)
T ss_dssp E
T ss_pred e
Confidence 5
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.9e-38 Score=253.21 Aligned_cols=237 Identities=20% Similarity=0.198 Sum_probs=193.0
Q ss_pred eccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccCCeeeeeeeee---eeceEEEEEeccCCeEEEeccCCCCCceEE
Q 023822 30 FRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSK---KYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~ 105 (276)
+.+|...|.+++|+| ++++|++++.|+.|++||+.+ +....+..+ ...|.+++|+|+++.+++++. |+.|++
T Consensus 114 ~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i 189 (383)
T 3ei3_B 114 GMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---TGRLLL 189 (383)
T ss_dssp CCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEET---TSEEEE
T ss_pred cCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECC---CCCEEE
Confidence 347999999999999 789999999999999999985 445555443 377999999999999999998 999999
Q ss_pred EEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccC----ceeeeeE-eecCCCeeEecC-CCcEEEE
Q 023822 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRA----EKCQGLL-RVQGRPAAAYDD-QGLVFAV 178 (276)
Q Consensus 106 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~----~~~~~~~-~~~~~~~~~~~~-~~~~l~~ 178 (276)
||+ +++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+++ ......+ +...+.+++|+| ++.++++
T Consensus 190 ~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 190 LGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp EET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEE
T ss_pred EEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEE
Confidence 999 5778888999999999999999999 999999999999999998 5555555 556688999999 9988887
Q ss_pred ee-CCeEEEEecccCCCCCeeeee---ecCCCC----------CceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEe
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFS---VGGDIS----------DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~---~~~~~~----------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (276)
++ |+.|++||+++.+........ ...+.. .+..++|+|++++ +++.|+.|++||+.+++.+..+
T Consensus 269 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l 346 (383)
T 3ei3_B 269 TDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQL 346 (383)
T ss_dssp EESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEE
T ss_pred EcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeee
Confidence 77 899999999987653221110 111222 3334666666665 7778999999999999999998
Q ss_pred ecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 245 NVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 245 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
..+. +...+..++|+|++++|++|+ ||.|
T Consensus 347 ~~~~-~~~~~~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 347 RDPN-AAGIISLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp CBTT-BCSCCCEEEECTTSSEEEEEE-TTEE
T ss_pred cCCC-CCceEEEEEEecCccEEEEec-CCcE
Confidence 7432 567788889999999999997 7764
No 69
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.1e-38 Score=256.50 Aligned_cols=243 Identities=14% Similarity=0.145 Sum_probs=199.8
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
..+....+.+|.+.|++++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+|+++.+++++. |+.
T Consensus 128 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~ 204 (420)
T 3vl1_A 128 FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASL---DGT 204 (420)
T ss_dssp SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEET---TSC
T ss_pred CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcC---CCc
Confidence 34455667899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred eEEEEccCCceeeeecc---cC---------------------cceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeee
Q 023822 103 LRLLSLHDNKYLRYFKG---HH---------------------DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 158 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~---~~---------------------~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 158 (276)
|++||+++++.+..+.. |. ..+.+++|+|++++|++++.||.|++||+++++....
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 99999999998888764 33 3444555678999999999999999999999887777
Q ss_pred E---eecCCCeeEecCCCc-EEEEee-CCeEEEEecccCCCCCeeeeeec-CCCCCceEEEECCCCcEEEEeecCCcEEE
Q 023822 159 L---RVQGRPAAAYDDQGL-VFAVAF-GGYIRMFDARKYEKGPFDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 159 ~---~~~~~~~~~~~~~~~-~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 232 (276)
+ +...+.+++|+|++. ++++++ |+.|++||+++.+.. ...+. .+...+.++.+ |++++|++++.|+.|++
T Consensus 285 ~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~---~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~i 360 (420)
T 3vl1_A 285 LPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP---VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKL 360 (420)
T ss_dssp ECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC---SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEE
T ss_pred cccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc---hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEE
Confidence 6 344577999999997 777776 899999999986532 22222 35667777755 57889999999999999
Q ss_pred EECCCCcEE---------EEeecCCCCCCceEEEEECCCCc---EEEEecCCCCC
Q 023822 233 LDSFRGTLL---------STYNVKPVSRNSTLEASFSPEGM---FVISGRVSPFS 275 (276)
Q Consensus 233 ~d~~~~~~~---------~~~~~~~~~~~~v~~~~~s~~g~---~l~~~~~dg~v 275 (276)
|++.+.... ..+. .+...|.+++|+|+++ .|++.+.+|++
T Consensus 361 w~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~ 412 (420)
T 3vl1_A 361 DIISDPESERPAIEFETPTFLV---SNDDAVSQFCYVSDDESNGEVLEVGKNNFC 412 (420)
T ss_dssp EEECCTTCCSCEECTTSCEEEC---CSSCCCCEEEEECCSSSSCEEEEEETTTEE
T ss_pred EeccCCCCCccceeccCccEEc---cCCcceEEEEEccCCCCcceEEEEcCCceE
Confidence 998774221 2222 5788999999999999 66666666653
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=257.30 Aligned_cols=243 Identities=11% Similarity=0.176 Sum_probs=195.9
Q ss_pred cccceeeccCC------------CcEEEEEEcCCC--CEEEEeecCCeEEEEEccCCeee--------------------
Q 023822 24 MEVGMSFRDYN------------GRISSMDFHKSS--SYLVTASDDESIRLYDVTAATCL-------------------- 69 (276)
Q Consensus 24 ~~~~~~~~~h~------------~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~-------------------- 69 (276)
++....+.+|. ++|++++|+|++ ..|++++.|+.|++||+.+++..
T Consensus 71 ~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 150 (447)
T 3dw8_B 71 YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVT 150 (447)
T ss_dssp EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCC
T ss_pred eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCccccc
Confidence 34567888998 889999999998 79999999999999999765432
Q ss_pred -------------------ee-eeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC-Cceee-------eecccC
Q 023822 70 -------------------KT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLR-------YFKGHH 121 (276)
Q Consensus 70 -------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~-~~~~~-------~~~~~~ 121 (276)
.. ...|...|.+++|+|+++.++++ . |+.|++||+++ ++... .+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 226 (447)
T 3dw8_B 151 TLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-D---DLRINLWHLEITDRSFNIVDIKPANMEELT 226 (447)
T ss_dssp SCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-C---SSEEEEEETTEEEEEEEEEECCCSSGGGCC
T ss_pred ceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-C---CCeEEEEECCCCCceeeeeecccccccccC
Confidence 12 35688899999999999999998 6 99999999984 33433 356899
Q ss_pred cceEEEEeccCC-CEEEEeeCCCeEEEEeccCcee----eeeEee--c------------CCCeeEecCCCcEEEEeeCC
Q 023822 122 DRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKC----QGLLRV--Q------------GRPAAAYDDQGLVFAVAFGG 182 (276)
Q Consensus 122 ~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~----~~~~~~--~------------~~~~~~~~~~~~~l~~~~d~ 182 (276)
..|.+++|+|++ ++|++++.||.|++||+++++. ...+.. . .+.+++|+|++++|++++++
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~ 306 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYL 306 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESS
T ss_pred cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCC
Confidence 999999999998 8999999999999999998876 455522 2 67899999999999988889
Q ss_pred eEEEEeccc-CCCCCeeeeeecCCCCC---------------ceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeec
Q 023822 183 YIRMFDARK-YEKGPFDIFSVGGDISD---------------ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (276)
Q Consensus 183 ~i~~~d~~~-~~~~~~~~~~~~~~~~~---------------i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (276)
.|++||++. .+. ...+..|... +..++|+|++++|++++.||.|++||+.+++.+.....
T Consensus 307 ~v~iwd~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~ 382 (447)
T 3dw8_B 307 SVKVWDLNMENRP----VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEAS 382 (447)
T ss_dssp EEEEEETTCCSSC----SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECC
T ss_pred eEEEEeCCCCccc----cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeec
Confidence 999999986 332 3333344321 33499999999999999999999999999887642210
Q ss_pred -----------------------------CCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 247 -----------------------------KPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 247 -----------------------------~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.......|..++|+|++++||+++.++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~ 439 (447)
T 3dw8_B 383 RENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNL 439 (447)
T ss_dssp STTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCE
T ss_pred ccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEeccee
Confidence 0023457889999999999999998874
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4e-37 Score=253.89 Aligned_cols=235 Identities=17% Similarity=0.305 Sum_probs=205.2
Q ss_pred cceeeccCCCcE-EEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 26 VGMSFRDYNGRI-SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 26 ~~~~~~~h~~~v-~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
....+.+|...| .++.+ ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+|++ .+++++. |+.|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~---dg~i~ 186 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST---DRTVR 186 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET---TSCEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC---CCCEE
Confidence 445788999885 66666 46799999999999999999999999999999999999999888 8888888 99999
Q ss_pred EEEccCCceeeeecccCcceEEEEec--cCCCEEEEeeCCCeEEEEeccCceeee-----------------------eE
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLC--SSKDCFISGSLDRTVLLWDQRAEKCQG-----------------------LL 159 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~-----------------------~~ 159 (276)
+||+++++.+..+.+|...|.+++|+ ++++++++++.|+.|++||+++..... .+
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999999999999999999999998 477899999999999999998765332 22
Q ss_pred eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC
Q 023822 160 RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (276)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 238 (276)
..+.....++++++.++++++ |+.|++||+++.+. ...+..|...+.+++|+|+++++++|+.||.|++||+.++
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 342 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC----LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG 342 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT
T ss_pred cCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Confidence 334444556678888887777 99999999987554 6667789999999999999999999999999999999999
Q ss_pred cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 239 TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 239 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+.+..+. +|...|.+++|+ +++|++++.||.|
T Consensus 343 ~~~~~~~---~h~~~v~~~~~~--~~~l~s~s~dg~v 374 (464)
T 3v7d_B 343 ELMYTLQ---GHTALVGLLRLS--DKFLVSAAADGSI 374 (464)
T ss_dssp EEEEEEC---CCSSCEEEEEEC--SSEEEEEETTSEE
T ss_pred cEEEEEe---CCCCcEEEEEEc--CCEEEEEeCCCcE
Confidence 9999998 789999999997 5799999999975
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-38 Score=258.71 Aligned_cols=244 Identities=11% Similarity=0.102 Sum_probs=204.9
Q ss_pred ccceeeccCCCcEEEEEEcCC-CCEEEEeecCCeEEEEEccCCe------eeee---eeeeeeceEEEEEecc-CCeEEE
Q 023822 25 EVGMSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAAT------CLKT---INSKKYGVDLVCFTSH-PTTVIY 93 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~------~~~~---~~~~~~~v~~~~~~~~-~~~l~~ 93 (276)
+....+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++ .... +..|...|.+++|+|+ +..+++
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEE
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEE
Confidence 466778899999999999998 8999999999999999999876 3333 3678889999999999 788888
Q ss_pred eccCCCCCceEEEEccCCceeeeeccc------CcceEEEEeccCC-CEEEEeeCCC---eEEEEeccCc-eeeeeE---
Q 023822 94 SSKNGWDESLRLLSLHDNKYLRYFKGH------HDRVVSLSLCSSK-DCFISGSLDR---TVLLWDQRAE-KCQGLL--- 159 (276)
Q Consensus 94 ~~~~~~d~~i~~~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~d~---~i~iwd~~~~-~~~~~~--- 159 (276)
++. |+.|++||+++++.+..+..+ ...|.+++|+|++ .++++++.|+ .|++||+++. .....+
T Consensus 184 ~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~ 260 (416)
T 2pm9_A 184 AGS---SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG 260 (416)
T ss_dssp ESS---SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC
T ss_pred EcC---CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC
Confidence 888 999999999999988888776 7899999999997 5899999998 9999999986 444444
Q ss_pred eecCCCeeEecC-CCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCC-cEEEEeecCCcEEEEECC
Q 023822 160 RVQGRPAAAYDD-QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 160 ~~~~~~~~~~~~-~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~ 236 (276)
+...+.+++|+| ++.+++++. |+.|++||+++++. ...+..|...+.+++|+|++ ++|++++.||.|++||+.
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ----LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE----EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc----ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 345577999999 888777777 89999999988654 56677888999999999999 899999999999999998
Q ss_pred CCcEEEEeec--------------------------------CCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 237 RGTLLSTYNV--------------------------------KPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 237 ~~~~~~~~~~--------------------------------~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+++....... ...+..++.+++|+|+|++|++++.||.|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 337 NLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp CCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred CCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 7664332210 00156778899999999999999999986
No 73
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.7e-37 Score=253.81 Aligned_cols=239 Identities=13% Similarity=0.194 Sum_probs=202.1
Q ss_pred eeeccCCCcEEEEEEcCC-CCEEEEeecCCeEEEEEccC----------CeeeeeeeeeeeceEEEEEeccCC-eEEEec
Q 023822 28 MSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTA----------ATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 95 (276)
.....|.+.|++++|+|+ +.+|++++.||.|++|++.+ .+....+..|...+.+++|+|++. .|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345679999999999997 67999999999999999987 577888899999999999999988 888888
Q ss_pred cCCCCCceEEEEccCCce-------eeeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCc---eeeeeE--eec
Q 023822 96 KNGWDESLRLLSLHDNKY-------LRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAE---KCQGLL--RVQ 162 (276)
Q Consensus 96 ~~~~d~~i~~~d~~~~~~-------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~---~~~~~~--~~~ 162 (276)
. ||.|++||+..+.. ...+..|...|.+++|+| ++.+|++++.|+.|++||+++. +....+ +..
T Consensus 202 ~---dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 202 D---DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp T---TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred C---CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 8 99999999987422 456678999999999999 6779999999999999999977 344444 455
Q ss_pred CCCeeEecCCCc-EEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCc-EEEEeecCCcEEEEECCC--
Q 023822 163 GRPAAAYDDQGL-VFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR-- 237 (276)
Q Consensus 163 ~~~~~~~~~~~~-~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-- 237 (276)
.+.+++|+|++. +++++. |+.|++||++.... ....+..|...|.+++|+|+++ +|++++.||.|++||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~---~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKL---KLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---CSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---CeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 678999999886 566665 89999999997443 2455567888999999999985 689999999999999986
Q ss_pred ------------CcEEEEeecCCCCCCceEEEEECCCCc-EEEEecCCCCC
Q 023822 238 ------------GTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGRVSPFS 275 (276)
Q Consensus 238 ------------~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v 275 (276)
.+++..+. +|...|.+++|+|+++ +|++++.||.+
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~l~s~s~dg~i 403 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHG---GHTAKISDFSWNPNEPWIICSVSEDNIM 403 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECC---CCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred cccCccccccCCcceEEEcC---CCCCCceEEEECCCCCCEEEEEECCCCE
Confidence 24555555 7889999999999999 89999999865
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.9e-38 Score=250.33 Aligned_cols=238 Identities=13% Similarity=0.175 Sum_probs=202.1
Q ss_pred eccCCCcEEEEEEcCC----CCEEEEeecCCeEEEEEccCCeeeeeeeeee-----eceEEEEEecc----CCeEEEecc
Q 023822 30 FRDYNGRISSMDFHKS----SSYLVTASDDESIRLYDVTAATCLKTINSKK-----YGVDLVCFTSH----PTTVIYSSK 96 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~----~~~l~~~~~ 96 (276)
..+|.++|++++|+|+ ...+++++.++.|++||+.+++.+..+..+. ..|.+++|+|+ +.++++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4589999999999984 4566777777899999999888877776544 67999999999 568999988
Q ss_pred CCCCCceEEEEccCCceeeeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCceeeeeE-----eecCCCeeEec
Q 023822 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLL-----RVQGRPAAAYD 170 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~ 170 (276)
|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+ +...+.+++|+
T Consensus 94 ---dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 94 ---RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp ---TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ---CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 99999999999999999999999999999999 8999999999999999999999888776 45567899999
Q ss_pred CCCcEEEEee-CCeEEEEecccCCCCC------------------------eeeeeecCCCCCceEEEECCCCcEEEEee
Q 023822 171 DQGLVFAVAF-GGYIRMFDARKYEKGP------------------------FDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 171 ~~~~~l~~~~-d~~i~~~d~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
|++.+++++. |+.|++||+++.+... ........|...|.+++|+ +++|++++
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~ 248 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS 248 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe
Confidence 9998888877 8999999998643200 0012233488899999998 67999999
Q ss_pred cCCcEEEEECCCCcE--------------EEEeecCCCCCCceEEEEECCC--CcEEEEecCCCCC
Q 023822 226 MEGHIHVLDSFRGTL--------------LSTYNVKPVSRNSTLEASFSPE--GMFVISGRVSPFS 275 (276)
Q Consensus 226 ~dg~i~i~d~~~~~~--------------~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~dg~v 275 (276)
.|+.|++||+.+++. +..+. .|...|.+++|+|+ +++|++|+.||.|
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~~l~~~~~dg~i 311 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD---YSQCDIWYMRFSMDFWQKMLALGNQVGKL 311 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE---CSSCCSSCCCCEECTTSSEEEEECTTSCE
T ss_pred cCCEEEEEeCCCccccccccccCCcchheecccc---ccCCcEEEEEEcCCCCCcEEEEEecCCcE
Confidence 999999999987754 66666 68889999999999 9999999999975
No 75
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-38 Score=255.33 Aligned_cols=247 Identities=13% Similarity=0.111 Sum_probs=191.0
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe---eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|+++.+++++. |+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~ 122 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG---AR 122 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES---SS
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec---CC
Confidence 5667788999999999999999999999999999999999877 66777889999999999999999999998 99
Q ss_pred ceEEEEccCCc---eeeeecc-cCcceEEEEeccCCCEEEEeeCCCeEEEEeccC------------------ceeeeeE
Q 023822 102 SLRLLSLHDNK---YLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA------------------EKCQGLL 159 (276)
Q Consensus 102 ~i~~~d~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~------------------~~~~~~~ 159 (276)
.|++||+++++ ....+.. |...|.+++|+|++++|++++.|+.|++||++. +++...+
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY 202 (377)
T ss_dssp CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC
T ss_pred eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc
Confidence 99999999887 3667777 999999999999999999999999999999852 3333333
Q ss_pred -eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCC
Q 023822 160 -RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 160 -~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 237 (276)
+...+.+++|+|++++|++++ |+.|++||+++.+..+.....+..|..++.+++|+|++++|++++.++.+ +|+...
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 444577999999999888777 89999999998765433355667888899999999999999998876655 666542
Q ss_pred CcE---------------------------E---------EEee-------------cCCCCCCceEEEEECCCC-c---
Q 023822 238 GTL---------------------------L---------STYN-------------VKPVSRNSTLEASFSPEG-M--- 264 (276)
Q Consensus 238 ~~~---------------------------~---------~~~~-------------~~~~~~~~v~~~~~s~~g-~--- 264 (276)
... . ..+. ....|...|+++++.+.. .
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~ 361 (377)
T 3dwl_C 282 SGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNIT 361 (377)
T ss_dssp ---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEE
T ss_pred CceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceE
Confidence 110 0 0010 011388999999976644 3
Q ss_pred EEEEecCCCCC
Q 023822 265 FVISGRVSPFS 275 (276)
Q Consensus 265 ~l~~~~~dg~v 275 (276)
.|++|+.||.|
T Consensus 362 ~~~s~g~Dg~i 372 (377)
T 3dwl_C 362 AFTSSGTDGRV 372 (377)
T ss_dssp EEEEEETTSEE
T ss_pred EEEeecCCCcE
Confidence 69999999976
No 76
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-38 Score=265.08 Aligned_cols=232 Identities=13% Similarity=0.128 Sum_probs=185.7
Q ss_pred CCCcEEEEEEcCCC---------CEEEE-------------------eecCCeEEEEEccCCeee----eeeeeeeeceE
Q 023822 33 YNGRISSMDFHKSS---------SYLVT-------------------ASDDESIRLYDVTAATCL----KTINSKKYGVD 80 (276)
Q Consensus 33 h~~~v~~~~~~~~~---------~~l~~-------------------~~~d~~i~iwd~~~~~~~----~~~~~~~~~v~ 80 (276)
+.+.|.+|+|+|++ ++||+ ++.|++|+|||+.+++.. ..+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 57889999999976 66766 447789999999877642 34556778899
Q ss_pred EEEEecc------CCeEEEeccCCCCCceEEEEccCCce-----------eeeecccCcceEEEEeccCCCEEEEeeCCC
Q 023822 81 LVCFTSH------PTTVIYSSKNGWDESLRLLSLHDNKY-----------LRYFKGHHDRVVSLSLCSSKDCFISGSLDR 143 (276)
Q Consensus 81 ~~~~~~~------~~~l~~~~~~~~d~~i~~~d~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 143 (276)
.++|+|+ +..|++++. |+.|++||+.+++. ...+.+|...|.+++|++++ .|++|+.||
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~---DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~Dg 287 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQ---EGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNG 287 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEET---TSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTS
T ss_pred EEEECCCCCCCCCCceEEEEec---CCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCC
Confidence 9999997 578999988 99999999976642 23677899999999999864 899999999
Q ss_pred eEEEEeccCcee-eeeE--eecCCCee--EecCCC-cEEEEee-CCeEEEEecccCCCCCeeeeeecCCC--CCceEEEE
Q 023822 144 TVLLWDQRAEKC-QGLL--RVQGRPAA--AYDDQG-LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDI--SDANVVKF 214 (276)
Q Consensus 144 ~i~iwd~~~~~~-~~~~--~~~~~~~~--~~~~~~-~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~--~~i~~~~~ 214 (276)
+|++||++++.. ...+ |...+.++ +++|++ .+|++++ |++|++||+++.+. ...+.+|. ..+.+++|
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~----~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT----TKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH----HCEEEEECSCCSCCCEEE
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc----ccccccccccCcccceEe
Confidence 999999997643 3334 55667777 578887 7777776 99999999987553 11222232 35789999
Q ss_pred CCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 215 SNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 215 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+|+++.+++++.|+.|++||++++.++..+. +|.+.|++++|+|+|++|++|+.||+|
T Consensus 364 sp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~---gH~~~V~sva~Sp~g~~l~Sgs~Dgtv 421 (524)
T 2j04_B 364 CPQIYSYIYSDGASSLRAVPSRAAFAVHPLV---SRETTITAIGVSRLHPMVLAGSADGSL 421 (524)
T ss_dssp ETTTTEEEEECSSSEEEEEETTCTTCCEEEE---ECSSCEEEEECCSSCCBCEEEETTTEE
T ss_pred CCCcCeEEEeCCCCcEEEEECcccccceeee---cCCCceEEEEeCCCCCeEEEEECCCEE
Confidence 9999999999999999999999999888887 699999999999999999999999976
No 77
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-37 Score=251.18 Aligned_cols=209 Identities=20% Similarity=0.284 Sum_probs=182.6
Q ss_pred cccceeeccCCCcEEEEEEcCC-CCEEEEeecCCeEEEEEccCCeeeeee-----eeeeeceEEEEEec-cCCeEEEecc
Q 023822 24 MEVGMSFRDYNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKTI-----NSKKYGVDLVCFTS-HPTTVIYSSK 96 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~ 96 (276)
......+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+ .+|...|.++.|++ ++..+++++.
T Consensus 147 ~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 147 MPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp STTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred ccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 4455678899999999999996 457999999999999999999988777 56888999999987 7889999998
Q ss_pred CCCCCceEEEEcc-CCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec---------CCCe
Q 023822 97 NGWDESLRLLSLH-DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ---------GRPA 166 (276)
Q Consensus 97 ~~~d~~i~~~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---------~~~~ 166 (276)
|+.|++||++ ..+.+..+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+... .+.+
T Consensus 227 ---D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 227 ---DTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp ---TSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred ---CCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 9999999998 45778889999999999999999999999999999999999999888776321 2678
Q ss_pred eEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeee----cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCc
Q 023822 167 AAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSV----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239 (276)
Q Consensus 167 ~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 239 (276)
++|+|++++++++. |+.|++||+...+. ...+ .+|...|.+++|+|+|++|++|+.|+.|++|++...+
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~~~----~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLAEM----VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTCCE----EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCCce----EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999998888 89999999987553 2222 5788999999999999999999999999999987654
No 78
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=249.84 Aligned_cols=240 Identities=15% Similarity=0.209 Sum_probs=196.9
Q ss_pred eeeccCCCcEEEEEEcCCCCEE-EEeec---CCeEEEEEccCCeeeeee-eeeeeceEEEEEecc---CCeEEEeccCCC
Q 023822 28 MSFRDYNGRISSMDFHKSSSYL-VTASD---DESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSH---PTTVIYSSKNGW 99 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l-~~~~~---d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~~~~ 99 (276)
..+++|...|.+++|+|++..+ ++++. |+.|++||+.+++..... ..|..+|.+++|+|+ ++.+++++.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~--- 88 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF--- 88 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET---
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC---
Confidence 4457899999999999998655 56655 899999999988765443 368889999999998 699999998
Q ss_pred CCceEEEEccCCc-eeeeecccCcceEEEE------eccCCCEEEEeeCCCeEEEEeccCce-eeeeEee------cCCC
Q 023822 100 DESLRLLSLHDNK-YLRYFKGHHDRVVSLS------LCSSKDCFISGSLDRTVLLWDQRAEK-CQGLLRV------QGRP 165 (276)
Q Consensus 100 d~~i~~~d~~~~~-~~~~~~~~~~~i~~~~------~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~------~~~~ 165 (276)
|+.|++||+.+++ .+..+.+|...|.+++ |+|++++|++++.|+.|++||+++++ ....+.. ..+.
T Consensus 89 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 89 GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCW 168 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEE
T ss_pred CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceE
Confidence 9999999999988 8888999999999995 46889999999999999999999876 5555522 1344
Q ss_pred eeE----ecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECC---CCcEEEEeecCCcEEEEECCC
Q 023822 166 AAA----YDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN---DGRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 166 ~~~----~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~ 237 (276)
++. |+|++.+++++. |+.|++||+++.+. .....+...+.+++|+| ++.+|++++.||.|++||+++
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 566 788999888888 79999999987552 23345778999999999 999999999999999999987
Q ss_pred CcEEEEee--cCCCCCCceEEEEECCCCc-EEEEecCCCCC
Q 023822 238 GTLLSTYN--VKPVSRNSTLEASFSPEGM-FVISGRVSPFS 275 (276)
Q Consensus 238 ~~~~~~~~--~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v 275 (276)
++.+..+. ...+|...|.+++|+|+++ +|++++.||.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 284 (357)
T 3i2n_A 244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL 284 (357)
T ss_dssp EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE
Confidence 76544432 1115889999999999998 89999999875
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.3e-37 Score=269.22 Aligned_cols=241 Identities=18% Similarity=0.265 Sum_probs=216.1
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
.+....+.+|.++|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|+++.+++++. |+.|
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i 121 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD---DLTV 121 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET---TSEE
T ss_pred CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC---CCEE
Confidence 4566778899999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEEEccCC-ceeeeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCceeeeeEe---ecCCCeeEecC--CCcEE
Q 023822 104 RLLSLHDN-KYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLR---VQGRPAAAYDD--QGLVF 176 (276)
Q Consensus 104 ~~~d~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~--~~~~l 176 (276)
++||+.++ .....+.+|...|.+++|+| +++.|++++.||.|++||+++++....+. ...+..++|+| ++.++
T Consensus 122 ~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp EEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred EEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 99999987 66778889999999999999 88899999999999999998887766662 25688999999 88888
Q ss_pred EEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 177 AVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 177 ~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
+++. |+.|++||+++++. ...+..|...+.+++|+|++++|++++.||.|++||+.+++.+..+. .+...+.
T Consensus 202 ~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~~~~~v~ 274 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSC----VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN---VGLERSW 274 (814)
T ss_dssp EEECTTSEEEEEETTTTEE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEEC---CSSSSEE
T ss_pred EEEeCCCEEEEEECCCCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---cCCCcEE
Confidence 8877 89999999987553 55667788899999999999999999999999999999999999888 6788999
Q ss_pred EEEECCCCc--EEEEecCCCC
Q 023822 256 EASFSPEGM--FVISGRVSPF 274 (276)
Q Consensus 256 ~~~~s~~g~--~l~~~~~dg~ 274 (276)
+++|+|+|+ ++++++.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ 295 (814)
T 3mkq_A 275 CIATHPTGRKNYIASGFDNGF 295 (814)
T ss_dssp EEEECTTCGGGEEEEEETTEE
T ss_pred EEEEccCCCceEEEEEeCCCE
Confidence 999999997 5777776653
No 80
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-38 Score=255.77 Aligned_cols=244 Identities=15% Similarity=0.208 Sum_probs=198.8
Q ss_pred ccccceee-ccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccC---Ce---eeeeeeeeeeceEEEEEeccCCeEEEe
Q 023822 23 SMEVGMSF-RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTA---AT---CLKTINSKKYGVDLVCFTSHPTTVIYS 94 (276)
Q Consensus 23 ~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~---~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~ 94 (276)
..+.+..+ .+|.++|++++|+| ++++|++|+.||+|++||+.+ +. ....+ .|...|.+++|+|+++.++++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEE
Confidence 34556677 88999999999999 999999999999999999976 43 22222 588899999999999999999
Q ss_pred ccCCCCCceEEEEcc---CCceeeeecc------------cCcceEEEE--eccCCCEEEEeeCCCeEEEEeccCceeee
Q 023822 95 SKNGWDESLRLLSLH---DNKYLRYFKG------------HHDRVVSLS--LCSSKDCFISGSLDRTVLLWDQRAEKCQG 157 (276)
Q Consensus 95 ~~~~~d~~i~~~d~~---~~~~~~~~~~------------~~~~i~~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 157 (276)
+. |+.|++||+. +++....+.. +...+.++. +++++++|++++.|+.|++||+++++.+.
T Consensus 130 s~---dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (437)
T 3gre_A 130 SK---DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ 206 (437)
T ss_dssp ET---TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred eC---CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence 98 9999999995 5554443332 344566666 45788999999999999999999999888
Q ss_pred eEe----ecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeec-CCCCCceEEEEC----CCCcEEEEeecC
Q 023822 158 LLR----VQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVG-GDISDANVVKFS----NDGRLMLLTTME 227 (276)
Q Consensus 158 ~~~----~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~----~~~~~l~~~~~d 227 (276)
.+. ...+.+++|+|++.++++++ |+.|++||++..+. ...+. .|..+|.+++|+ |++++|++++.|
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d 282 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL----IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK 282 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE----EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE----EEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence 874 35688999999999888887 89999999987443 33332 566789999665 468899999999
Q ss_pred CcEEEEECCCCcEEEEeecCC-----------------------CCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 228 GHIHVLDSFRGTLLSTYNVKP-----------------------VSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 228 g~i~i~d~~~~~~~~~~~~~~-----------------------~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
|.|++||+.+++.+..+..+. .|...|++++|+ ++++|++|+.||.|
T Consensus 283 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 283 TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 999999999999888876321 156678999999 78999999999875
No 81
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-37 Score=254.92 Aligned_cols=242 Identities=16% Similarity=0.167 Sum_probs=190.5
Q ss_pred cccceeeccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccCCee--eeeeeeeeeceEEEEEec-cCCeEEEeccCCC
Q 023822 24 MEVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATC--LKTINSKKYGVDLVCFTS-HPTTVIYSSKNGW 99 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~ 99 (276)
++......+|...|+||+|+| ++++||+|+.||.|+|||+.+++. ...+.+|...|.+++|+| ++.+|++++.
T Consensus 109 ~~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~--- 185 (435)
T 4e54_B 109 YRILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM--- 185 (435)
T ss_dssp TTSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS---
T ss_pred eeecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC---
Confidence 344556678999999999999 567999999999999999987654 344568999999999998 6789999988
Q ss_pred CCceEEEEccCCceeeeec--ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCc-
Q 023822 100 DESLRLLSLHDNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGL- 174 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~- 174 (276)
|+.|++||++++....... .+...+.+++|+|++++|++|+.||.|++||++... +..+ +...+.+++|+|++.
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNLRMHKKKVTHVALNPCCDW 264 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCSBCCSSCEEEEEECTTCSS
T ss_pred CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEEecccceEEeeeecCCCce
Confidence 9999999998765433333 234467899999999999999999999999997643 3334 566788999999875
Q ss_pred EEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCC---C
Q 023822 175 VFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV---S 250 (276)
Q Consensus 175 ~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~ 250 (276)
++++++ |+.|++||+++.+... .......|..+|++++|+|+|++|++++.||.|++||+.+++....+..+.. .
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVRGKA-SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp EEEEEETTSBCCEEETTTCCSSS-CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred EEEEecCcceeeEEecccccccc-eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 666665 9999999998765422 2334456888999999999999999999999999999999988777653211 1
Q ss_pred CCceEEEEECCCCcEEEEec
Q 023822 251 RNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 251 ~~~v~~~~~s~~g~~l~~~~ 270 (276)
...+....|+|++.++++++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp SSCCCBCEECSSSSCEEEEC
T ss_pred cceeEEEEEcCCCCEEEEEE
Confidence 12344567888887777664
No 82
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.6e-36 Score=235.46 Aligned_cols=234 Identities=16% Similarity=0.177 Sum_probs=196.8
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
.+.+|...|++++|+|++++|++|+.||+|++||+++++++..+..|...+.++. +++..+++++. ++.+++|+.
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~---~~~~~~~~~ 136 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSSGSR---SGHIHHHDV 136 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEEEET---TSEEEEEET
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEEEec---CCceEeeec
Confidence 4567889999999999999999999999999999999999999999987776654 56788999988 999999998
Q ss_pred cCC-ceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE------eecCCCeeEecCCC-cEEE--E
Q 023822 109 HDN-KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL------RVQGRPAAAYDDQG-LVFA--V 178 (276)
Q Consensus 109 ~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~-~~l~--~ 178 (276)
... ..+..+.+|...+..+.+.+++++|++++.|+.|++||+++++..... +...+..+.++|.+ .++. .
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 776 456678899999999999999999999999999999999876543222 33446678888865 3333 2
Q ss_pred ee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee--cCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
+. ++.|++||.+... ......+...+..+.|+|+++.+++++ .|+.|++||+.+++++..+. +|.+.|+
T Consensus 217 ~~~~~~i~lwd~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~---gH~~~V~ 288 (318)
T 4ggc_A 217 GTSDRHIRIWNVCSGA-----CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GHTSRVL 288 (318)
T ss_dssp CTTTCEEEEEETTTCC-----EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CCSSCEE
T ss_pred cCCCCEEEEEeccccc-----ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc---CCCCCEE
Confidence 33 7999999998754 223334667899999999998887654 79999999999999999998 7999999
Q ss_pred EEEECCCCcEEEEecCCCCC
Q 023822 256 EASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 256 ~~~~s~~g~~l~~~~~dg~v 275 (276)
+++|+|+|++|++|+.||+|
T Consensus 289 ~l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 289 SLTMSPDGATVASAAADETL 308 (318)
T ss_dssp EEEECTTSSCEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEecCCeE
Confidence 99999999999999999976
No 83
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.5e-37 Score=244.33 Aligned_cols=235 Identities=12% Similarity=0.131 Sum_probs=199.9
Q ss_pred ceeeccCCCcEEEEEEcCCCC-EEEEeecCCeEEEEEc-cCCeeeeeeee--eeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 27 GMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDV-TAATCLKTINS--KKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
...+.+|...|.+++|+|+++ +|++++.||.|++||+ .+++. ..+.. |...|.+++|+| +..+++++. |+.
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~---d~~ 123 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASW---DGL 123 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEET---TSE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcC---CCe
Confidence 345568999999999999999 9999999999999999 77754 66777 999999999999 999999998 999
Q ss_pred eEEEEccC---------CceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccC-ceeeeeE----eecCCCeeE
Q 023822 103 LRLLSLHD---------NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLL----RVQGRPAAA 168 (276)
Q Consensus 103 i~~~d~~~---------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~----~~~~~~~~~ 168 (276)
|++||+++ ++++..+. |...|.+++|+|++ +++++.|+.|++||+++ ....... +...+.+++
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA 200 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEE
T ss_pred EEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEE
Confidence 99999988 77777776 88999999999887 99999999999999998 5432211 445677999
Q ss_pred ecC-CCcEEEEee-CCeEEEEecccC--CCCCeeeeeecCCC---------CCceEEEECCCCcEEEEeecCCcEEEEEC
Q 023822 169 YDD-QGLVFAVAF-GGYIRMFDARKY--EKGPFDIFSVGGDI---------SDANVVKFSNDGRLMLLTTMEGHIHVLDS 235 (276)
Q Consensus 169 ~~~-~~~~l~~~~-d~~i~~~d~~~~--~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 235 (276)
|+| ++.+++++. |+.|++|+++.. .........+..|. ..|.+++|+|++++|++++.||.|++||+
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 999 988888877 899999999875 10011133344443 48999999999999999999999999999
Q ss_pred CCCcEEEEeecCCCC-CCceEEEEECCCCcEEEEecCCCC
Q 023822 236 FRGTLLSTYNVKPVS-RNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 236 ~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.+++.+..+. +| ...|.+++ |++++|++++.||+
T Consensus 281 ~~~~~~~~~~---~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 281 QTRKKIKNFA---KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp TTTEEEEECC---CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred ccHhHhhhhh---cccCCCceEec--CCCCeEEEEecCCc
Confidence 9999999888 67 89999999 99999999999997
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-37 Score=251.54 Aligned_cols=240 Identities=10% Similarity=0.098 Sum_probs=193.9
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEcc---CCeeeeeeeee------------eeceEEEE--EeccCCeEEEe
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVT---AATCLKTINSK------------KYGVDLVC--FTSHPTTVIYS 94 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~------------~~~v~~~~--~~~~~~~l~~~ 94 (276)
+|.++|++++|+|++++|++++.||.|++||++ +++....+..+ ...+.++. +++++..++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 599999999999999999999999999999995 55544444332 33455555 45678899999
Q ss_pred ccCCCCCceEEEEccCCceeeeecc--cCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe---ecCCCeeEe
Q 023822 95 SKNGWDESLRLLSLHDNKYLRYFKG--HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR---VQGRPAAAY 169 (276)
Q Consensus 95 ~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~ 169 (276)
+. |+.|++||+++++.+..+.. |...|.+++|+|++++|++++.||.|++||+++++++..+. ...+.++++
T Consensus 189 ~~---d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 189 TN---LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp ET---TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred eC---CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 98 99999999999999999987 89999999999999999999999999999999998888763 334667854
Q ss_pred c----CCCcEEEEee-CCeEEEEecccCCCCCeee----------e----------eecC--CCCCceEEEECCCCcEEE
Q 023822 170 D----DQGLVFAVAF-GGYIRMFDARKYEKGPFDI----------F----------SVGG--DISDANVVKFSNDGRLML 222 (276)
Q Consensus 170 ~----~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~----------~----------~~~~--~~~~i~~~~~~~~~~~l~ 222 (276)
+ +++.++++++ |+.|++||+++++...... + .+.+ |...|.+++|+ ++++|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 4 5677888887 8999999998754210000 0 0112 66779999999 779999
Q ss_pred EeecCCcEEEEECCCCcEEEEeecC----------------------------------CCCCCceEEEEECCC--CcEE
Q 023822 223 LTTMEGHIHVLDSFRGTLLSTYNVK----------------------------------PVSRNSTLEASFSPE--GMFV 266 (276)
Q Consensus 223 ~~~~dg~i~i~d~~~~~~~~~~~~~----------------------------------~~~~~~v~~~~~s~~--g~~l 266 (276)
+++.|+.|++||+.+++....+..+ ..|...|++++|+++ +.+|
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l 424 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLL 424 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEE
T ss_pred ecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEE
Confidence 9999999999999999887776631 027889999999998 8899
Q ss_pred EEecCCCCC
Q 023822 267 ISGRVSPFS 275 (276)
Q Consensus 267 ~~~~~dg~v 275 (276)
++|+.||+|
T Consensus 425 ~s~~~dG~I 433 (437)
T 3gre_A 425 VACDNSGLI 433 (437)
T ss_dssp EEEETTSCE
T ss_pred EEEcCCceE
Confidence 999999986
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.5e-37 Score=250.68 Aligned_cols=239 Identities=16% Similarity=0.193 Sum_probs=188.3
Q ss_pred ccceeeccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccCCeeeeeeee--eeeceEEEEEeccCCeEEEeccCCCCC
Q 023822 25 EVGMSFRDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINS--KKYGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
.....+.+|.++|++++|+| ++++|++++.||+|++||++++........ +...+.+++|+|+++++++++. |+
T Consensus 155 ~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg 231 (435)
T 4e54_B 155 PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN---VG 231 (435)
T ss_dssp CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS---SS
T ss_pred eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC---CC
Confidence 34455678999999999998 789999999999999999987654333332 3345789999999999999998 99
Q ss_pred ceEEEEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE-----eecCCCeeEecCCCcE
Q 023822 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL-----RVQGRPAAAYDDQGLV 175 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 175 (276)
.|++||++. +.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+++.+....+ +...+.+++|+|++.+
T Consensus 232 ~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 232 NVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp BEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred cEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 999999864 56778889999999999999876 7889999999999999987655443 4556789999999988
Q ss_pred EEEee-CCeEEEEecccCCCCCeeeeeecCCC------CCceEEEECCCCcEEEEee------------cCCcEEEEECC
Q 023822 176 FAVAF-GGYIRMFDARKYEKGPFDIFSVGGDI------SDANVVKFSNDGRLMLLTT------------MEGHIHVLDSF 236 (276)
Q Consensus 176 l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~~~------------~dg~i~i~d~~ 236 (276)
|++++ |+.|++||+++++. ...+..|. ..+..+.|+|++.++++++ .++.|++||..
T Consensus 311 l~s~~~D~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~ 386 (435)
T 4e54_B 311 LLTTDQKSEIRVYSASQWDC----PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGN 386 (435)
T ss_dssp EEEEESSSCEEEEESSSSSS----EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSS
T ss_pred eEEEcCCCEEEEEECCCCcc----ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECC
Confidence 88877 99999999988664 22222221 1233456777776666553 34579999999
Q ss_pred CCcEEEEeecCCCCCCceEEE-EECCCCcEEEEecCCCC
Q 023822 237 RGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVISGRVSPF 274 (276)
Q Consensus 237 ~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~~~~dg~ 274 (276)
+++.+..+.. +|...|.++ +|+|+|++|++|+ |+.
T Consensus 387 ~g~~~~~l~~--~~~~~v~s~~~fspdg~~lasg~-d~~ 422 (435)
T 4e54_B 387 SGKMMCQLYD--PESSGISSLNEFNPMGDTLASAM-GYH 422 (435)
T ss_dssp SCCEEEEECC--SSCCCCCCEEEECTTSSCEEEEC-SSE
T ss_pred CCcEEEEEeC--CCCCcEEEEEEECCCCCEEEEEc-CCc
Confidence 9999888753 467788887 6999999999987 554
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8e-36 Score=246.13 Aligned_cols=236 Identities=18% Similarity=0.342 Sum_probs=206.4
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEec--cCCeEEEeccCCCC
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWD 100 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d 100 (276)
..+....+.+|.+.|.+++|+|++ .|++|+.||+|++||+.+++.+..+..|...|.+++|++ ++.++++++. |
T Consensus 151 ~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~---d 226 (464)
T 3v7d_B 151 NKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR---D 226 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEET---T
T ss_pred CCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcC---C
Confidence 345677888999999999999987 999999999999999999999999999999999999994 6788999998 9
Q ss_pred CceEEEEccCCce-----------------------eeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeee
Q 023822 101 ESLRLLSLHDNKY-----------------------LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG 157 (276)
Q Consensus 101 ~~i~~~d~~~~~~-----------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 157 (276)
+.|++||+++++. ...+.+|...+.++ +++++++++++.|+.|++||+++++.+.
T Consensus 227 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 304 (464)
T 3v7d_B 227 NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLY 304 (464)
T ss_dssp SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 9999999987653 44567788888877 5788999999999999999999999888
Q ss_pred eE--eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEE
Q 023822 158 LL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234 (276)
Q Consensus 158 ~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 234 (276)
.+ +...+.+++|+|++.++++++ |+.|++||+++++. ...+..|...+.+++|+ +++|++++.||.|++||
T Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~----~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd 378 (464)
T 3v7d_B 305 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL----MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWD 378 (464)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE----EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEE
Confidence 87 456678999999998888887 89999999987654 66777899999999997 57899999999999999
Q ss_pred CCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 235 SFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+.+++...... +...+..++|+|++++|++|+ ||.+
T Consensus 379 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-dg~i 414 (464)
T 3v7d_B 379 ANDYSRKFSYH----HTNLSAITTFYVSDNILVSGS-ENQF 414 (464)
T ss_dssp TTTCCEEEEEE----CTTCCCEEEEEECSSEEEEEE-TTEE
T ss_pred CCCCceeeeec----CCCCccEEEEEeCCCEEEEec-CCeE
Confidence 99988777765 667788899999999999998 6654
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.5e-37 Score=248.35 Aligned_cols=233 Identities=10% Similarity=0.009 Sum_probs=172.8
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeee-----eeeeeeeeceEEEEEec--------cCCeEEEeccCCCCC
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-----KTINSKKYGVDLVCFTS--------HPTTVIYSSKNGWDE 101 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~~~~d~ 101 (276)
..+....+.+++.+|++++.|++|+|||..+++.. ..+.+|...|.+++|+| +++.|++++. |+
T Consensus 90 ~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~---D~ 166 (393)
T 4gq1_A 90 GDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD---DC 166 (393)
T ss_dssp -------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET---TS
T ss_pred CCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC---CC
Confidence 33333444456678999999999999999887643 34678999999999998 7889999998 99
Q ss_pred ceEEEEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE---------------------
Q 023822 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL--------------------- 159 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--------------------- 159 (276)
+|++||+.++.+...+..|...+.+++|+|++. +|++++.|++|++||+++++.....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 999999999988888888999999999999875 8999999999999999887644322
Q ss_pred ------eecCCCeeEec-CCCcEEEEee-CCeEEEEecccCCCCCee---------------eeeecCCCCCceEEEECC
Q 023822 160 ------RVQGRPAAAYD-DQGLVFAVAF-GGYIRMFDARKYEKGPFD---------------IFSVGGDISDANVVKFSN 216 (276)
Q Consensus 160 ------~~~~~~~~~~~-~~~~~l~~~~-d~~i~~~d~~~~~~~~~~---------------~~~~~~~~~~i~~~~~~~ 216 (276)
+...+.++.|. ++++.++++. |+.+++||+...+..... ......+. ......|+|
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 325 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP-SLLGACPHP 325 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSC-CSSCCEECS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC-cceeEEEcc
Confidence 12234566665 7888777777 999999999875431100 00111111 222334444
Q ss_pred --CCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 217 --DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 217 --~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
++.++++|+.||.|++||+.+++....+. .|..+|.+++|+|||++||+++++|.
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~---~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPI---QLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEE---ECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEec---CCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 44567788899999999999999888777 57889999999999999999999985
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-35 Score=240.75 Aligned_cols=230 Identities=17% Similarity=0.220 Sum_probs=195.9
Q ss_pred ccCCCc--EEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee-eeeceEEEEEeccCCeEEEeccCCCCCceEEEE
Q 023822 31 RDYNGR--ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (276)
Q Consensus 31 ~~h~~~--v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d 107 (276)
.+|... +.+++|++ ..+++++.|+.|++||+.+++....+.. |...|.+++|+|+++++++++. ||.|++||
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---dg~i~iwd 162 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG---NGLVDIYD 162 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC---CCeEEEEE
Confidence 366655 44466664 5688888999999999999988877765 6788999999999999999998 99999999
Q ss_pred ccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccC-ceeeeeE--eecCCCeeEecCCCcEEEEee-CCe
Q 023822 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGY 183 (276)
Q Consensus 108 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~ 183 (276)
+.+++.+..+.+|...|.+++| ++++|++++.||.|++||++. ......+ +...+.+++|+|++.++++++ |+.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 9999999999999999999999 457999999999999999994 4445555 556678999999999888887 899
Q ss_pred EEEEecccCCCCCeeeeeecCCCCCceEEEECCCC-cEEEEee--cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEEC
Q 023822 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 260 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (276)
|++||+++.+. ...+..|...|.+++|+|++ .++++++ .|+.|++||+.+++.+..+. +...|.+++|+
T Consensus 241 v~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~s 312 (401)
T 4aez_A 241 VQIWDARSSIP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD----AGSQVTSLIWS 312 (401)
T ss_dssp EEEEETTCSSE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEC
T ss_pred EEEccCCCCCc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe----CCCcEEEEEEC
Confidence 99999997553 55667888999999999976 5556654 79999999999999999887 66789999999
Q ss_pred CCCcEEEE--ecCCCCC
Q 023822 261 PEGMFVIS--GRVSPFS 275 (276)
Q Consensus 261 ~~g~~l~~--~~~dg~v 275 (276)
|++++|++ |+.||.+
T Consensus 313 ~~~~~l~~~~g~~dg~i 329 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNL 329 (401)
T ss_dssp SSSSEEEEEECTTTCEE
T ss_pred CCCCeEEEEeecCCCcE
Confidence 99999999 5578764
No 89
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-35 Score=240.48 Aligned_cols=235 Identities=17% Similarity=0.303 Sum_probs=186.4
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
+....+.+|...|.+++|+ ++.|++++.||.|++||+.+++.+..+..|...+.++.| +++.+++++. |+.|+
T Consensus 190 ~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~ 262 (445)
T 2ovr_B 190 ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY---DFMVK 262 (445)
T ss_dssp EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET---TSCEE
T ss_pred cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC---CCEEE
Confidence 4456677788888888875 456888888888888888888877777778888888877 6777888877 88888
Q ss_pred EEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee-CCe
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGY 183 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d~~ 183 (276)
+||+++++.+..+.+|...|.+++| +++++++++.|+.|++||+++++....+..+......+.+++.++++++ |+.
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 340 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADST 340 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSC
T ss_pred EEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCe
Confidence 8888888888888888888888888 7778888888888888888888887777544444444445566666666 899
Q ss_pred EEEEecccCCCCCeeeeeecC---CCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC--CCCCCceEEEE
Q 023822 184 IRMFDARKYEKGPFDIFSVGG---DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK--PVSRNSTLEAS 258 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v~~~~ 258 (276)
|++||+++++. ...+.. |...|.+++|+ +++|++++.||.|++||+.+++.+..+... ..+.+.|.+++
T Consensus 341 i~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 414 (445)
T 2ovr_B 341 VKIWDIKTGQC----LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR 414 (445)
T ss_dssp EEEEETTTCCE----EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEE
T ss_pred EEEEECCCCcE----EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEE
Confidence 99999987553 334433 77889999996 579999999999999999999999888311 14778999999
Q ss_pred ECCCCcEEEEecCCCC
Q 023822 259 FSPEGMFVISGRVSPF 274 (276)
Q Consensus 259 ~s~~g~~l~~~~~dg~ 274 (276)
|+|++.+|++|+.||+
T Consensus 415 ~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 415 ASNTKLVCAVGSRNGT 430 (445)
T ss_dssp ECSSEEEEEEECSSSS
T ss_pred ecCCEEEEEEcccCCC
Confidence 9999999999999996
No 90
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-35 Score=231.69 Aligned_cols=210 Identities=12% Similarity=0.142 Sum_probs=174.2
Q ss_pred cccceeeccCCCcEEEEEEcC--CCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEecc--CCeEEEeccC
Q 023822 24 MEVGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSKN 97 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~ 97 (276)
.+...++.+|.++|++++|+| ++++|++|+.|++|++||+++++ .+..+..|...|.+++|+|+ +..+++++.
T Consensus 43 ~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~- 121 (297)
T 2pm7_B 43 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS- 121 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-
T ss_pred cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC-
Confidence 355678999999999999986 38999999999999999998774 55667788999999999997 889999998
Q ss_pred CCCCceEEEEccCCce--eeeecccCcceEEEEeccC-------------CCEEEEeeCCCeEEEEeccCce----eeee
Q 023822 98 GWDESLRLLSLHDNKY--LRYFKGHHDRVVSLSLCSS-------------KDCFISGSLDRTVLLWDQRAEK----CQGL 158 (276)
Q Consensus 98 ~~d~~i~~~d~~~~~~--~~~~~~~~~~i~~~~~~~~-------------~~~l~~~~~d~~i~iwd~~~~~----~~~~ 158 (276)
|+.|++||++++.. ...+.+|...|.+++|+|+ +++|++++.|++|++||+++.+ ....
T Consensus 122 --d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~ 199 (297)
T 2pm7_B 122 --DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (297)
T ss_dssp --TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred --CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE
Confidence 99999999987642 4567789999999999997 5699999999999999998765 3444
Q ss_pred E--eecCCCeeEecCCC---cEEEEee-CCeEEEEecccCCCCCe-eeeeecCCCCCceEEEECCCCcEEEEeecCCcEE
Q 023822 159 L--RVQGRPAAAYDDQG---LVFAVAF-GGYIRMFDARKYEKGPF-DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIH 231 (276)
Q Consensus 159 ~--~~~~~~~~~~~~~~---~~l~~~~-d~~i~~~d~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 231 (276)
+ |...+.+++|+|++ .+|++++ |+.|++||++....... .......+...+.+++|+|+|++|++++.||.|+
T Consensus 200 l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~ 279 (297)
T 2pm7_B 200 LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (297)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEE
T ss_pred ecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 4 45568899999984 7777776 99999999987432111 1222245678899999999999999999999999
Q ss_pred EEECC
Q 023822 232 VLDSF 236 (276)
Q Consensus 232 i~d~~ 236 (276)
+|+..
T Consensus 280 lw~~~ 284 (297)
T 2pm7_B 280 LWKEN 284 (297)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99976
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.2e-35 Score=269.49 Aligned_cols=206 Identities=19% Similarity=0.286 Sum_probs=175.0
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEec--cCCeEEEeccCCCC
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWD 100 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d 100 (276)
+.+....+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.+..+..|...|.+++|+| ++..+++++. |
T Consensus 646 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~---d 722 (1249)
T 3sfz_A 646 TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSN---D 722 (1249)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEET---T
T ss_pred CCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeC---C
Confidence 3456677889999999999999999999999999999999999999999999999999999999 4557888887 9
Q ss_pred CceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--------------------
Q 023822 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-------------------- 160 (276)
Q Consensus 101 ~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------------------- 160 (276)
+.|++||+.+++....+.+|...|.+++|+|+++++++++.||.|++||+++++....+.
T Consensus 723 ~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 802 (1249)
T 3sfz_A 723 FFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVK 802 (1249)
T ss_dssp SCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBC
T ss_pred CeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEE
Confidence 999999999999999999999999999999999999999999999999998776544331
Q ss_pred -------------------------------------ecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeee
Q 023822 161 -------------------------------------VQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSV 202 (276)
Q Consensus 161 -------------------------------------~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~ 202 (276)
...+.+++|+|++.+++++. |+.|++||+.++.. ...+
T Consensus 803 ~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~----~~~~ 878 (1249)
T 3sfz_A 803 CCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK----VADC 878 (1249)
T ss_dssp CCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEE----EEEE
T ss_pred EEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce----eeec
Confidence 22345677777777777776 78888888876443 5556
Q ss_pred cCCCCCceEEEECCCCcEEEEeecCCcEEEEEC
Q 023822 203 GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDS 235 (276)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 235 (276)
.+|...|.+++|+|+|++|++++.||.|++|++
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEH
T ss_pred CCCccceEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 678888888888888888888888888888874
No 92
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.7e-35 Score=233.22 Aligned_cols=212 Identities=18% Similarity=0.226 Sum_probs=172.2
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeee--------------------------------
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI-------------------------------- 72 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-------------------------------- 72 (276)
.+...+++|...|.+++|+|++++|++++.|+.|++|+..........
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 345678999999999999999999999999999999998654332222
Q ss_pred -----------eeeeeceEEEEEeccC--CeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEe
Q 023822 73 -----------NSKKYGVDLVCFTSHP--TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISG 139 (276)
Q Consensus 73 -----------~~~~~~v~~~~~~~~~--~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 139 (276)
..|...+..++|++++ ..+++++. |+.|++||+++++....+.+|.+.|.+++|+|++++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~---d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW---DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 233 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC---CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEE
Confidence 2234556777777654 34566665 8999999999999989999999999999999999999999
Q ss_pred eCCCeEEEEeccCceeeeeE-eecCCCeeEecCCCcEEEEeeCCeEEEEecccCCC-----CCeeeeeecCCCCCceEEE
Q 023822 140 SLDRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVK 213 (276)
Q Consensus 140 ~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~~i~~~~ 213 (276)
+.|+.|++||+++.+.+..+ ....+..+.++|++.+++++.|+.|++||++.... ..........|...|++++
T Consensus 234 s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 313 (340)
T 4aow_A 234 GKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 313 (340)
T ss_dssp ETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEE
T ss_pred eCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEE
Confidence 99999999999999988887 44457789999999999999999999999986432 1111223446788999999
Q ss_pred ECCCCcEEEEeecCCcEEEEECCCCc
Q 023822 214 FSNDGRLMLLTTMEGHIHVLDSFRGT 239 (276)
Q Consensus 214 ~~~~~~~l~~~~~dg~i~i~d~~~~~ 239 (276)
|+|+|++|++|+.||.|+|||+.+|+
T Consensus 314 ~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 314 WSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999999999999886
No 93
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=259.32 Aligned_cols=232 Identities=10% Similarity=0.145 Sum_probs=189.8
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
..+|.+.|++++|+|++++||+|+.||+|+||+..+.+....+. |..+|.+++|+| +++|++++. |+.|++||+.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~---D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINA---KDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEET---TCEEEEEETT
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEEC---cCeEEEEECC
Confidence 34899999999999999999999999999999998877665543 677899999999 888999988 9999999999
Q ss_pred CCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeee-----------eE--eecCCCeeEecCCC-cE
Q 023822 110 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG-----------LL--RVQGRPAAAYDDQG-LV 175 (276)
Q Consensus 110 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-----------~~--~~~~~~~~~~~~~~-~~ 175 (276)
+++.+..+. |...|++++|+|++++|++|+.||.|++||+++++... .+ +...+.+++|+|++ ..
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 999888886 77899999999999999999999999999999887531 11 44578899999964 55
Q ss_pred EEEee-CCeEEEEecccCCCCCeeeeeecC------------------CCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 176 FAVAF-GGYIRMFDARKYEKGPFDIFSVGG------------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 176 l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~------------------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
++++. |+.| +||+++.+. ...+.. |...|.+++|+|+|++|++++.||.|++||++
T Consensus 167 l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEI----KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEECSSCEE-EEETTTTEE----EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred EEEEeCCCcE-EEECCCCce----EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 55555 8999 999987543 222222 34679999999999999999999999999999
Q ss_pred CCcEEEE--ee---cCC----------CCCCceEEEEEC----CCC-cEEEEecCC
Q 023822 237 RGTLLST--YN---VKP----------VSRNSTLEASFS----PEG-MFVISGRVS 272 (276)
Q Consensus 237 ~~~~~~~--~~---~~~----------~~~~~v~~~~~s----~~g-~~l~~~~~d 272 (276)
+++++.. +. .+. .+...|.+++|+ |++ .+|++|+.|
T Consensus 242 ~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~ 297 (902)
T 2oaj_A 242 SGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSI 297 (902)
T ss_dssp TCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECS
T ss_pred CCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCC
Confidence 9988764 21 010 134579999995 554 567777665
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.8e-35 Score=242.11 Aligned_cols=231 Identities=19% Similarity=0.302 Sum_probs=200.6
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
+.+....+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.+..+..|...|.+++|+ +..+++++. |+.
T Consensus 162 ~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---dg~ 234 (435)
T 1p22_A 162 TLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSK---DRS 234 (435)
T ss_dssp SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEET---TSC
T ss_pred CCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeC---CCc
Confidence 45566788899999999999 68899999999999999999999999999999999999996 458999988 999
Q ss_pred eEEEEccCCcee---eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee--cCCCeeEecCCCcEEE
Q 023822 103 LRLLSLHDNKYL---RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--QGRPAAAYDDQGLVFA 177 (276)
Q Consensus 103 i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~ 177 (276)
|++||+.+++.. ..+.+|...|.+++| +++++++++.||.|++||+++++.+..+.. ..+.++.+ ++.+++
T Consensus 235 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 310 (435)
T 1p22_A 235 IAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVV 310 (435)
T ss_dssp EEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEE
T ss_pred EEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEE
Confidence 999999988765 677889999999999 778999999999999999999998888844 34556666 455666
Q ss_pred Eee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCc---------EEEEeecC
Q 023822 178 VAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT---------LLSTYNVK 247 (276)
Q Consensus 178 ~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~ 247 (276)
+++ |+.|++||+++++. ...+..|...+.+++| ++++|++|+.||.|++||+.+++ .+..+.
T Consensus 311 ~g~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-- 382 (435)
T 1p22_A 311 SGSSDNTIRLWDIECGAC----LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-- 382 (435)
T ss_dssp EEETTSCEEEEETTTCCE----EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC--
T ss_pred EEeCCCeEEEEECCCCCE----EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc--
Confidence 665 99999999998654 6667789999999999 78899999999999999987766 777777
Q ss_pred CCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 248 PVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 248 ~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+|.+.|.+++| ++++|++|+.||+|
T Consensus 383 -~h~~~v~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 383 -EHSGRVFRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp -CCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred -CCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence 78999999999 78899999999975
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=241.65 Aligned_cols=222 Identities=13% Similarity=0.109 Sum_probs=177.8
Q ss_pred EEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc---------CC
Q 023822 41 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH---------DN 111 (276)
Q Consensus 41 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~---------~~ 111 (276)
.+.+++++|++|+.||+|++||+.+++.+..+. ...|..+.|+|+ +++++. |+.|++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~---D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGP---CNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECS---TTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecC---CCeEEEEEccCceEEeecCCc
Confidence 445678899999999999999999999888776 457888889888 888887 9999999765 44
Q ss_pred ceeeeec-ccCcceEEEEecc--CCCEEEEeeCCCeEEEEeccCceeeeeE---eecCCCeeEecCCCcEEEEee-CCeE
Q 023822 112 KYLRYFK-GHHDRVVSLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGRPAAAYDDQGLVFAVAF-GGYI 184 (276)
Q Consensus 112 ~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d~~i 184 (276)
+.+..+. .|...|.+++|+| +++++++++.|++|++||+++++..... +...+.+++|+|++.++++++ |+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 4344443 6778999999999 9999999999999999999999886555 233588999999999999877 9999
Q ss_pred EEEecccCCCCCeeeeeecC-CCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE--EEEECC
Q 023822 185 RMFDARKYEKGPFDIFSVGG-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL--EASFSP 261 (276)
Q Consensus 185 ~~~d~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~--~~~~s~ 261 (276)
++||+++++.. ...+.. |..+|.+++|+|+|.+|++++ |+.|++||+++++.+..+.....+...+. +++|+|
T Consensus 195 ~iwd~~~~~~~---~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 195 DVYNLSSPDQA---SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp EEEESSCTTSC---CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred EEEECCCCCCC---ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECC
Confidence 99999987642 134455 889999999999999999999 55999999999887666553212333443 699999
Q ss_pred CCcEEEEecC-CCC
Q 023822 262 EGMFVISGRV-SPF 274 (276)
Q Consensus 262 ~g~~l~~~~~-dg~ 274 (276)
+|++|++++. |+.
T Consensus 271 ~g~~l~~~s~~d~~ 284 (343)
T 3lrv_A 271 SGKNMIAYSNESNS 284 (343)
T ss_dssp TSSEEEEEETTTTE
T ss_pred CCCEEEEecCCCCc
Confidence 9999999877 664
No 96
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.7e-35 Score=233.43 Aligned_cols=238 Identities=11% Similarity=0.133 Sum_probs=182.9
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
++...+..|...|++++|+||+++|++|+.++ +++|++++++....... ..+..+.+.++++.++..+.. |+.|+
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--d~~v~ 84 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV--KEVVH 84 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS--TTEEE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC--ccEEE
Confidence 34455688999999999999999999998775 78999988776654432 257888999998888554432 88999
Q ss_pred EEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCc-eeeeeEeecCCCeeEecCCCcEEEE--ee-
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVFAV--AF- 180 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~--~~- 180 (276)
+||+.+++.+..+. +...|.+++|+++. ++++ .|+.|++||+.+. +.+..+.. ....+++++ .+++. +.
T Consensus 85 iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~--~~la~~sg~~ 157 (355)
T 3vu4_A 85 IWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSN--GLLVYSNEFN 157 (355)
T ss_dssp EEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEET--TEEEEEESSC
T ss_pred EEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEc--cEEEEeCCCc
Confidence 99999999988887 67799999998764 4444 4789999999988 66666644 444566777 44444 34
Q ss_pred CCeEEEEecccCCCC------C-----ee-eeeecCCCCCceEEEECCCCcEEEEeecCCc-EEEEECCCCcEEEEeecC
Q 023822 181 GGYIRMFDARKYEKG------P-----FD-IFSVGGDISDANVVKFSNDGRLMLLTTMEGH-IHVLDSFRGTLLSTYNVK 247 (276)
Q Consensus 181 d~~i~~~d~~~~~~~------~-----~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~ 247 (276)
+|.|++||+++.... . .. ...+.+|..+|.+++|+|+|++|++++.|++ |++||+.+++++..+...
T Consensus 158 ~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 158 LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 899999999875410 0 01 4556789999999999999999999999998 999999999999988731
Q ss_pred CCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 248 PVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 248 ~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.|...|.+++|+|+|++|++++.|++|
T Consensus 238 -~h~~~v~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 238 -LDRADVVDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp -TCCSCEEEEEECTTSCEEEEEETTCEE
T ss_pred -CCCCcEEEEEECCCCCEEEEEECCCEE
Confidence 178999999999999999999999875
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-35 Score=240.02 Aligned_cols=233 Identities=13% Similarity=0.083 Sum_probs=192.4
Q ss_pred eeccCCCcEEEEEEcCCCCEE-EEeecCCeEEEEEcc--CCeeeeeee--eeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 29 SFRDYNGRISSMDFHKSSSYL-VTASDDESIRLYDVT--AATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
...+|.+.|.+++|+|++++| ++++.||.|++||+. +++.+..+. .+...|.+++|+|++++|++++. ++.+
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v 173 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDV 173 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcE
Confidence 345788899999999999996 899999999999999 888888876 45578999999999999999998 9999
Q ss_pred EEEEccCCceee----eecccCcceEEEEeccC---CCEEEEeeCCCeEEEEeccCceeeeeE---eecCCCeeEecCCC
Q 023822 104 RLLSLHDNKYLR----YFKGHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGRPAAAYDDQG 173 (276)
Q Consensus 104 ~~~d~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~ 173 (276)
++|++.+++... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+ +...+.+++|+ ++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp EEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-ST
T ss_pred EEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CC
Confidence 999998877554 77889999999999999 999999999999999999988877663 55667899999 99
Q ss_pred cEEEEee-CCeEEEEecccCCCCCeeeeeec-----------------------CCCCCceEEEECCCCcEEEEee-cCC
Q 023822 174 LVFAVAF-GGYIRMFDARKYEKGPFDIFSVG-----------------------GDISDANVVKFSNDGRLMLLTT-MEG 228 (276)
Q Consensus 174 ~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~-----------------------~~~~~i~~~~~~~~~~~l~~~~-~dg 228 (276)
.+|++++ |+.|++||+++++. ....... .....+.+++|+|++++|++++ .|+
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~ 330 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGKN--LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATK 330 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCCE--EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCS
T ss_pred CEEEEEeCCCeEEEEECCCCcE--eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCC
Confidence 8888877 89999999988653 1111110 2335688999999999999998 899
Q ss_pred cEEEEEC--CCC---cEEEEeecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 229 HIHVLDS--FRG---TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 229 ~i~i~d~--~~~---~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
.|++|++ .++ +.+..+. .+ ..|.+++|+|++.++++++.
T Consensus 331 ~i~iw~~~~~~~~~l~~~~~~~---~~-~~v~~~~~~~~~~~v~~~~~ 374 (450)
T 2vdu_B 331 CIIILEMSEKQKGDLALKQIIT---FP-YNVISLSAHNDEFQVTLDNK 374 (450)
T ss_dssp EEEEEEECSSSTTCEEEEEEEE---CS-SCEEEEEEETTEEEEEECCT
T ss_pred eEEEEEeccCCCCceeeccEec---cC-CceEEEEecCCcEEEEEecc
Confidence 9999999 665 5666666 45 88999999997655555544
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.6e-36 Score=234.76 Aligned_cols=208 Identities=14% Similarity=0.179 Sum_probs=171.5
Q ss_pred cceeeccCCCcEEEEEEcC--CCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEecc--CCeEEEeccCCC
Q 023822 26 VGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGW 99 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~ 99 (276)
....+++|.++|.+++|+| ++++|++|+.|++|++||+++++ ....+..|...|.+++|+|+ +..+++++.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~--- 125 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS--- 125 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS---
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC---
Confidence 4567889999999999986 48999999999999999998873 56677889999999999998 788999998
Q ss_pred CCceEEEEccCCce---eeeecccCcceEEEEeccC-----------------CCEEEEeeCCCeEEEEeccCc---eee
Q 023822 100 DESLRLLSLHDNKY---LRYFKGHHDRVVSLSLCSS-----------------KDCFISGSLDRTVLLWDQRAE---KCQ 156 (276)
Q Consensus 100 d~~i~~~d~~~~~~---~~~~~~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~i~iwd~~~~---~~~ 156 (276)
|+.|++||++.+.. ...+.+|...|.+++|+|+ +++|++++.|++|++||++.. +..
T Consensus 126 D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~ 205 (316)
T 3bg1_A 126 DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE 205 (316)
T ss_dssp SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEE
T ss_pred CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcccee
Confidence 99999999987632 3456789999999999997 468999999999999999754 344
Q ss_pred eeE--eecCCCeeEecCCC----cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCc
Q 023822 157 GLL--RVQGRPAAAYDDQG----LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 229 (276)
Q Consensus 157 ~~~--~~~~~~~~~~~~~~----~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 229 (276)
..+ |...+.+++|+|++ .+|++++ |+.|++||++...........+..|...|.+++|+|++++|++++.|+.
T Consensus 206 ~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 206 QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp ECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred eecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 444 55568899999986 6676666 9999999998632211112223456789999999999999999999999
Q ss_pred EEEEECC
Q 023822 230 IHVLDSF 236 (276)
Q Consensus 230 i~i~d~~ 236 (276)
|++|+..
T Consensus 286 v~lw~~~ 292 (316)
T 3bg1_A 286 VTLWKES 292 (316)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999975
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9e-35 Score=247.45 Aligned_cols=240 Identities=11% Similarity=0.098 Sum_probs=209.6
Q ss_pred ccceeeccCCCc-EEEEEEcC--CCCEEEEeecCCeEEEEEccCC--------eeeeeeeeeeeceEEEEEeccCCeEEE
Q 023822 25 EVGMSFRDYNGR-ISSMDFHK--SSSYLVTASDDESIRLYDVTAA--------TCLKTINSKKYGVDLVCFTSHPTTVIY 93 (276)
Q Consensus 25 ~~~~~~~~h~~~-v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~ 93 (276)
+....+.+|.+. |++++|+| ++++|++++.||.|++||+.++ +....+..|..+|.+++|+|+++++++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 567788999999 99999999 9999999999999999999754 677788889999999999999999999
Q ss_pred eccCCCC----CceEEEEccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE--eec---C
Q 023822 94 SSKNGWD----ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL--RVQ---G 163 (276)
Q Consensus 94 ~~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~---~ 163 (276)
++. + +.|++|| .++.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+++.+....+ +.. .
T Consensus 134 ~~~---~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 134 VGE---GRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 208 (615)
T ss_dssp EEC---CSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred ecc---CCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCce
Confidence 986 4 6788887 6778888999999999999999998 8999999999999999999988887 444 6
Q ss_pred CCeeEecCC-CcEEEEee-CCeEEEEecccCCCCCeeeeee-c---CCCCCceEEEECCCCcEEEEeecCCcEEEEECCC
Q 023822 164 RPAAAYDDQ-GLVFAVAF-GGYIRMFDARKYEKGPFDIFSV-G---GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 164 ~~~~~~~~~-~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 237 (276)
+.+++|+|+ +.+++++. |+.|++||+++++. ...+ . .|...|.+++|+ ++++|++++.|+.|++||+.+
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF----LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTCCE----EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE----eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 779999999 98888777 89999999987653 4444 4 788899999999 999999999999999999999
Q ss_pred CcEEEEeecC-CCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 238 GTLLSTYNVK-PVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 238 ~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
++.+..+..+ ......+.++.|+ +++++++++.||.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i 321 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTL 321 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCE
T ss_pred CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCE
Confidence 9999888732 1124678888886 89999999999875
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.1e-35 Score=234.53 Aligned_cols=197 Identities=13% Similarity=0.120 Sum_probs=165.6
Q ss_pred cCCCcEEEEEEcCCCCEEEE--eecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc
Q 023822 32 DYNGRISSMDFHKSSSYLVT--ASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
.+...+.+++|+|||++|++ ++.|++|+|||+++++++..+. |...|.+++|+|+++++++++ ++.+.+|+..
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s----~~~~~~~~~~ 205 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYIT----GSSLEVISTV 205 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEEC----SSCEEEEETT
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecc----ceeEEEEEec
Confidence 35566899999999999865 4478999999999999988876 667899999999999999987 6667788877
Q ss_pred CCceee--eecccCcceEEEEeccCCCEEEEeeCCC----eEEEEeccCceeee----eE--eecCCCeeEecCCCcEEE
Q 023822 110 DNKYLR--YFKGHHDRVVSLSLCSSKDCFISGSLDR----TVLLWDQRAEKCQG----LL--RVQGRPAAAYDDQGLVFA 177 (276)
Q Consensus 110 ~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~----~~--~~~~~~~~~~~~~~~~l~ 177 (276)
+++.+. ....|...|.+++|+|+++++++++.|+ .+++||+....... .+ +...+.+++|+|++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~la 285 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAV 285 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceE
Confidence 776553 3456888999999999999999999887 68899988765432 22 345678999999999999
Q ss_pred Eee-CCeEEEEecccCCCCCeeeee-ecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCC
Q 023822 178 VAF-GGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 178 ~~~-d~~i~~~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 237 (276)
+++ |+.|++||+++++. +.. +.+|..+|++++|+|||++|++||.|++|+|||+..
T Consensus 286 sgs~D~~V~iwd~~~~~~----~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 286 LASNDNSIALVKLKDLSM----SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSCEEEEETTTTEE----EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEcCCCEEEEEECCCCcE----EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 888 89999999988653 444 468999999999999999999999999999999864
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-35 Score=251.06 Aligned_cols=234 Identities=10% Similarity=0.077 Sum_probs=203.6
Q ss_pred ccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCC----eeeeeeeeeeec-eEEEEEec--cCCeEEEeccCCCCCce
Q 023822 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAA----TCLKTINSKKYG-VDLVCFTS--HPTTVIYSSKNGWDESL 103 (276)
Q Consensus 31 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~~~~d~~i 103 (276)
..|.+.|.+++|+|++++|++++ ++.|++||+.++ +....+..|... |.+++|+| +++++++++. |+.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~---dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE---SGKV 90 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET---TSEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC---CCEE
Confidence 36889999999999999999998 789999999998 889999999999 99999999 9999999998 9999
Q ss_pred EEEEccCC--------ceeeeecccCcceEEEEeccCCCEEEEeeCC----CeEEEEeccCceeeeeE--eecCCCeeEe
Q 023822 104 RLLSLHDN--------KYLRYFKGHHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLL--RVQGRPAAAY 169 (276)
Q Consensus 104 ~~~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~--~~~~~~~~~~ 169 (276)
++||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++....+ +...+.+++|
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~ 168 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHL 168 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEE
Confidence 99999754 6677888899999999999999999999988 6899998 34444444 5566889999
Q ss_pred cCCCc-EEEEee-CCeEEEEecccCCCCCeeeeeecCCCC---CceEEEECCC-CcEEEEeecCCcEEEEECCCCcEEEE
Q 023822 170 DDQGL-VFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDIS---DANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLST 243 (276)
Q Consensus 170 ~~~~~-~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~ 243 (276)
+|++. +++++. |+.|++||+++.+. ...+..|.. .|.+++|+|+ +++|++++.||.|++||+.+++.+..
T Consensus 169 ~~~~~~~l~~~~~d~~v~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 169 KQSRPMRSMTVGDDGSVVFYQGPPFKF----SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp CSSSSCEEEEEETTTEEEEEETTTBEE----EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CCCCCcEEEEEeCCCcEEEEeCCCcce----eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 99996 555555 89999999887553 556777888 8999999999 99999999999999999999999888
Q ss_pred e-ecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 244 Y-NVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 244 ~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+ .....|...|.+++|+ ++++|++++.||.+
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i 276 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGADATI 276 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETTSEE
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCCCcE
Confidence 8 2111378999999999 99999999999865
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-35 Score=239.40 Aligned_cols=233 Identities=12% Similarity=0.041 Sum_probs=193.5
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe---eeeeeeee-----------------------------------
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT---CLKTINSK----------------------------------- 75 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~----------------------------------- 75 (276)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999966665 57899999999988 55555422
Q ss_pred -------------------eeceEEEEEeccCCeE-EEeccCCCCCceEEEEcc--CCceeeeec--ccCcceEEEEecc
Q 023822 76 -------------------KYGVDLVCFTSHPTTV-IYSSKNGWDESLRLLSLH--DNKYLRYFK--GHHDRVVSLSLCS 131 (276)
Q Consensus 76 -------------------~~~v~~~~~~~~~~~l-~~~~~~~~d~~i~~~d~~--~~~~~~~~~--~~~~~i~~~~~~~ 131 (276)
...|.+++|+|++++| ++++. |+.|++||+. +++.+..+. .|...|.+++|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS---DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGG---GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECC---CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 2269999999999996 77777 9999999999 888888776 5678999999999
Q ss_pred CCCEEEEeeCCCeEEEEeccCceeee----eE--eecCCCeeEecCC---CcEEEEee-CCeEEEEecccCCCCCeeeee
Q 023822 132 SKDCFISGSLDRTVLLWDQRAEKCQG----LL--RVQGRPAAAYDDQ---GLVFAVAF-GGYIRMFDARKYEKGPFDIFS 201 (276)
Q Consensus 132 ~~~~l~~~~~d~~i~iwd~~~~~~~~----~~--~~~~~~~~~~~~~---~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~ 201 (276)
++++|++++.++.|++|++.+.+... .+ +...+.+++|+|+ +++|++++ |+.|++||+++++. ...
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~----~~~ 235 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI----VDK 235 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC----EEE
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce----eee
Confidence 99999999999999999998876543 33 5566889999999 88888777 89999999987653 333
Q ss_pred -ecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCC----------------------CCCCceEEEE
Q 023822 202 -VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------------------VSRNSTLEAS 258 (276)
Q Consensus 202 -~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------------~~~~~v~~~~ 258 (276)
..+|...|.+++|+ ++++|++++.|+.|++||+.+++++..+.... .....|.+++
T Consensus 236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 45788999999999 99999999999999999999999888876210 1245789999
Q ss_pred ECCCCcEEEEec-CCCCC
Q 023822 259 FSPEGMFVISGR-VSPFS 275 (276)
Q Consensus 259 ~s~~g~~l~~~~-~dg~v 275 (276)
|+|++++|++++ .|+.|
T Consensus 315 ~~~~~~~l~~~~~~d~~i 332 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCI 332 (450)
T ss_dssp ECSSSSEEEEEETTCSEE
T ss_pred EeCCCCEEEEEECCCCeE
Confidence 999999999998 77654
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.6e-35 Score=238.04 Aligned_cols=232 Identities=14% Similarity=0.178 Sum_probs=192.4
Q ss_pred CcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCe----eeeeeeeeeeceEEEEEec-cCCeEEEeccCCCCCceEEEEc
Q 023822 35 GRISSMDFHKSSSYLV-TASDDESIRLYDVTAAT----CLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
.....++++|+...++ +++.||.|+||++.... ....+.+|...|.+++|+| +++.|++++. |+.|++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---dg~v~vw~~ 111 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE---DCTVMVWEI 111 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET---TSEEEEEEC
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC---CCeEEEEEc
Confidence 3445688998765444 57889999999996542 3445778999999999999 8999999998 999999999
Q ss_pred cCC-------ceeeeecccCcceEEEEeccCC-CEEEEeeCCCeEEEEeccCceeeeeE----eecCCCeeEecCCCcEE
Q 023822 109 HDN-------KYLRYFKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLL----RVQGRPAAAYDDQGLVF 176 (276)
Q Consensus 109 ~~~-------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~l 176 (276)
.++ +++..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++....+ +...+.+++|+|++.+|
T Consensus 112 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE
Confidence 987 5678889999999999999998 69999999999999999999988877 55667899999999888
Q ss_pred EEee-CCeEEEEecccCCCCCeeeeee-cCCCCC-ceEEEECCCCcEEEEe---ecCCcEEEEECCCCcE-EEEeecCCC
Q 023822 177 AVAF-GGYIRMFDARKYEKGPFDIFSV-GGDISD-ANVVKFSNDGRLMLLT---TMEGHIHVLDSFRGTL-LSTYNVKPV 249 (276)
Q Consensus 177 ~~~~-d~~i~~~d~~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~-~~~~~~~~~ 249 (276)
++++ |+.|++||+++++. ...+ ..|... +.+++|+|++++|++| +.|+.|++||+.+++. +..... .
T Consensus 192 ~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~ 265 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--D 265 (402)
T ss_dssp EEEETTSEEEEEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--C
T ss_pred EEEecCCcEEEEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--c
Confidence 7777 99999999987553 4444 456554 8999999999999999 7999999999988765 333321 3
Q ss_pred CCCceEEEEECCCCcEEE-EecCCCCC
Q 023822 250 SRNSTLEASFSPEGMFVI-SGRVSPFS 275 (276)
Q Consensus 250 ~~~~v~~~~~s~~g~~l~-~~~~dg~v 275 (276)
+...+.+++|+|++++|+ +|+.||.|
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i 292 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSI 292 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCE
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeE
Confidence 677899999999999986 55678865
No 104
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-34 Score=235.45 Aligned_cols=223 Identities=15% Similarity=0.278 Sum_probs=195.0
Q ss_pred ccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC
Q 023822 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (276)
Q Consensus 31 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~ 110 (276)
.+|...|.++++ ++++|++|+.||.|++||+.+++....+.+|...|.+++| +++.+++++. ||.|++||+.+
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~---dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEEEESSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC---CCeEEEEECCC
Confidence 456778998887 7899999999999999999999999999999999999999 7889999998 99999999999
Q ss_pred CceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee---eeE--eecCCCeeEecCCCcEEEEee-CCeE
Q 023822 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ---GLL--RVQGRPAAAYDDQGLVFAVAF-GGYI 184 (276)
Q Consensus 111 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i 184 (276)
++.+..+.+|...|.+++|+ ++.+++++.||.|++||+++++.. ..+ +...+.++.+ ++.++++++ |+.|
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i 278 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI 278 (435)
T ss_dssp CCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred CcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 99999999999999999996 458999999999999999987655 333 3344556666 666666666 9999
Q ss_pred EEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc
Q 023822 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (276)
Q Consensus 185 ~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 264 (276)
++||+++++. ...+..|...+.+++| +++++++|+.||.|++||+.+++.+..+. +|...|.+++| +++
T Consensus 279 ~vwd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~--~~~ 347 (435)
T 1p22_A 279 KVWNTSTCEF----VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE---GHEELVRCIRF--DNK 347 (435)
T ss_dssp EEEETTTCCE----EEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEC--CSS
T ss_pred EEEECCcCcE----EEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEe---CCcCcEEEEEe--cCC
Confidence 9999988654 5666788889999998 46799999999999999999999999998 78999999999 788
Q ss_pred EEEEecCCCCC
Q 023822 265 FVISGRVSPFS 275 (276)
Q Consensus 265 ~l~~~~~dg~v 275 (276)
+|++|+.||.|
T Consensus 348 ~l~sg~~dg~i 358 (435)
T 1p22_A 348 RIVSGAYDGKI 358 (435)
T ss_dssp EEEEEETTSCE
T ss_pred EEEEEeCCCcE
Confidence 99999999976
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-35 Score=239.37 Aligned_cols=227 Identities=10% Similarity=0.078 Sum_probs=180.8
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe-----------------------------eeeeee-eeeeceEE
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-----------------------------CLKTIN-SKKYGVDL 81 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-----------------------------~~~~~~-~~~~~v~~ 81 (276)
.-...|.+++|+|||+++|+++.|++|+ |...++ ....+. .|...|.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 4457899999999999999999999995 433222 111111 34677999
Q ss_pred EEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCc-----ceEEEEeccCCCEEEEeeCCCeEEEEeccCcee-
Q 023822 82 VCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD-----RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC- 155 (276)
Q Consensus 82 ~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~- 155 (276)
++|+|+|+.+++++. ||.|++||... .+..+. |.. .+.+++|+|+|++|++|+.||+|++||+..+..
T Consensus 91 vawSPdG~~LAs~s~---dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~ 164 (588)
T 2j04_A 91 CKPSPIDDWMAVLSN---NGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSEN 164 (588)
T ss_dssp EEECSSSSCEEEEET---TSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTT
T ss_pred EEECCCCCEEEEEeC---CCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccc
Confidence 999999999999998 99999999544 566666 665 499999999999999999999999999998752
Q ss_pred ------eeeE------eecCCCeeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeee-cCCCCCceEEEECCCCcEEE
Q 023822 156 ------QGLL------RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSNDGRLML 222 (276)
Q Consensus 156 ------~~~~------~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~ 222 (276)
+..+ |...+.+++|+|++ +++++.|+.|++||+....... ....+ ..|...|.+++|+ |+.||
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~-~~~tL~~~h~~~V~svaFs--g~~LA 240 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQP-VSRMIQNASRRKITDLKIV--DYKVV 240 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCC-CEEEEECCCSSCCCCEEEE--TTEEE
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcccc-ceeeecccccCcEEEEEEE--CCEEE
Confidence 3343 23467899999999 7777779999999998755311 11233 3677899999999 68898
Q ss_pred EeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEE--CCCCcEEEEecCCCC
Q 023822 223 LTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF--SPEGMFVISGRVSPF 274 (276)
Q Consensus 223 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~dg~ 274 (276)
+++ ++.|++||+.+++...... +|...+.+++| +||+..|+++++||+
T Consensus 241 Sa~-~~tIkLWd~~~~~~~~~~~---gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 241 LTC-PGYVHKIDLKNYSISSLKT---GSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp EEC-SSEEEEEETTTTEEEEEEC---SCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred EEe-CCeEEEEECCCCeEEEEEc---CCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 887 6999999998887754443 58999999999 999999999999986
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-33 Score=231.97 Aligned_cols=234 Identities=17% Similarity=0.302 Sum_probs=204.0
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
+.+....+.+|.+.|.+++|+ +++|++|+.||+|++||+.+++.+..+..|...|.++.|+ ++.+++++. |+.
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~---dg~ 220 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSR---DAT 220 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEET---TSE
T ss_pred CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeC---CCE
Confidence 345667888999999999998 5799999999999999999999999999999999999994 678999988 999
Q ss_pred eEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEEee
Q 023822 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~ 180 (276)
|++||+.+++.+..+.+|...|.+++| +++++++++.|+.|++||+++++....+. ...+.++.+ ++..+++++
T Consensus 221 i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 296 (445)
T 2ovr_B 221 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGS 296 (445)
T ss_dssp EEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEE
T ss_pred EEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEe
Confidence 999999999999999999999999999 78899999999999999999999888884 344556666 666666666
Q ss_pred -CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEE
Q 023822 181 -GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (276)
Q Consensus 181 -d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (276)
|+.|++||+++++. ...+..|...+.++.+ +++++++++.||.|++||+.+++.+..+..+..|...|.+++|
T Consensus 297 ~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 297 LDTSIRVWDVETGNC----IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp TTSCEEEEETTTCCE----EEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE
T ss_pred CCCeEEEEECCCCCE----EEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE
Confidence 99999999988654 5566778888888777 4679999999999999999999999999854458899999999
Q ss_pred CCCCcEEEEecCCCCC
Q 023822 260 SPEGMFVISGRVSPFS 275 (276)
Q Consensus 260 s~~g~~l~~~~~dg~v 275 (276)
+ +++|++|+.||.|
T Consensus 371 ~--~~~l~s~~~dg~v 384 (445)
T 2ovr_B 371 N--KNFVITSSDDGTV 384 (445)
T ss_dssp C--SSEEEEEETTSEE
T ss_pred C--CCEEEEEeCCCeE
Confidence 6 5799999999975
No 107
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=255.13 Aligned_cols=125 Identities=18% Similarity=0.214 Sum_probs=106.6
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeee-----------eeeeeeeeceEEEEEecc-CCeEEE
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL-----------KTINSKKYGVDLVCFTSH-PTTVIY 93 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~ 93 (276)
....+. |.+.|++++|+|++++|++|+.||.|++||+.+++.. ..+..|..+|.+++|+|+ +..+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 344454 6789999999999999999999999999999988754 234568889999999996 467888
Q ss_pred eccCCCCCceEEEEccCCceeeeeccc------------------CcceEEEEeccCCCEEEEeeCCCeEEEEeccCcee
Q 023822 94 SSKNGWDESLRLLSLHDNKYLRYFKGH------------------HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC 155 (276)
Q Consensus 94 ~~~~~~d~~i~~~d~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 155 (276)
++. |+.| +||+++++.+..+..| ...|.+++|+|++++|++++.|++|++||++++++
T Consensus 170 g~~---dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 170 SYE---YVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp ECS---SCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EeC---CCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 877 9999 9999999888877655 47799999999999999999999999999876543
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=236.72 Aligned_cols=221 Identities=12% Similarity=0.182 Sum_probs=179.8
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeee-----ceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY-----GVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
.|...|.+++|+|+|++||+++.||.|++||.+. ++..+. |.. .+.+++|+|++++|++++. ||+|++|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~---DGtVkIW 156 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE---DGELQFF 156 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET---TSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC---CCEEEEE
Confidence 5688999999999999999999999999999644 666666 654 4999999999999999999 9999999
Q ss_pred EccCCce-------eeee----cccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee---eeE---eecCCCeeEe
Q 023822 107 SLHDNKY-------LRYF----KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ---GLL---RVQGRPAAAY 169 (276)
Q Consensus 107 d~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---~~~---~~~~~~~~~~ 169 (276)
|+.+++. +.++ .+|...|.+++|+|++ +++++.|++|++||+..++.. ..+ +...+..++|
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 9998753 5665 6788899999999999 888899999999999887742 233 3456889999
Q ss_pred cCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEE--CCCCcEEEEeecCCcEEEEECCC------C---
Q 023822 170 DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKF--SNDGRLMLLTTMEGHIHVLDSFR------G--- 238 (276)
Q Consensus 170 ~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~i~d~~~------~--- 238 (276)
+ +..+++++++.|++||+.+.+. .....+|...+..++| +|++..|++++.||. ++|.... +
T Consensus 235 s--g~~LASa~~~tIkLWd~~~~~~----~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~ 307 (588)
T 2j04_A 235 V--DYKVVLTCPGYVHKIDLKNYSI----SSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIA 307 (588)
T ss_dssp E--TTEEEEECSSEEEEEETTTTEE----EEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSH
T ss_pred E--CCEEEEEeCCeEEEEECCCCeE----EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEE
Confidence 9 5777777789999999987442 2233379999999999 999999999999999 9998642 1
Q ss_pred --------------cEEEEeecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 239 --------------TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 239 --------------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
+.+..+ .+...|.+++|||||+.+|+++.
T Consensus 308 a~~d~~v~lW~~~g~~l~~~----~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 308 PYLEKKFKKWSTIWNEFNNY----ETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHHHHTTTTTTSSSSS----CCEEEEEEEEECTTSSEEEEEEE
T ss_pred EEcCCEEEEEECCCCceeee----ccceEEEEEEECCCCCEEEEEEe
Confidence 111111 12446899999999999998864
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=226.83 Aligned_cols=213 Identities=12% Similarity=0.139 Sum_probs=180.7
Q ss_pred ccccceeeccCCCcEEEEEEcCC--CCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEecc--CCeEEEecc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKS--SSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSK 96 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~ 96 (276)
..+....+.+|.++|++++|+++ +++|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ +..+++++.
T Consensus 44 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 44 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC
Confidence 45566788899999999999987 8999999999999999999987 67778889999999999999 899999998
Q ss_pred CCCCCceEEEEccCCc--eeeeecccCcceEEEEecc-------------CCCEEEEeeCCCeEEEEeccCceee----e
Q 023822 97 NGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCS-------------SKDCFISGSLDRTVLLWDQRAEKCQ----G 157 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~iwd~~~~~~~----~ 157 (276)
|+.|++||+.++. ....+..|...|.+++|+| ++++|++++.|+.|++||++..... .
T Consensus 124 ---d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 124 ---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp ---TSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred ---CCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE
Confidence 9999999998874 3446678999999999999 6899999999999999999876432 2
Q ss_pred eE--eecCCCeeEecCC---CcEEEEee-CCeEEEEecccCCCCC-eeeeeecCCCCCceEEEECCCCcEEEEeecCCcE
Q 023822 158 LL--RVQGRPAAAYDDQ---GLVFAVAF-GGYIRMFDARKYEKGP-FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 230 (276)
Q Consensus 158 ~~--~~~~~~~~~~~~~---~~~l~~~~-d~~i~~~d~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 230 (276)
.+ +...+.+++|+|+ +.++++++ |+.|++||++...... ........+...+.+++|+|+|++|++++.||.|
T Consensus 201 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i 280 (379)
T 3jrp_A 201 TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 280 (379)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSE
T ss_pred EEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcE
Confidence 33 4556789999999 88888877 9999999998864321 1233334577899999999999999999999999
Q ss_pred EEEECCCC
Q 023822 231 HVLDSFRG 238 (276)
Q Consensus 231 ~i~d~~~~ 238 (276)
++|++..+
T Consensus 281 ~iw~~~~~ 288 (379)
T 3jrp_A 281 TLWKENLE 288 (379)
T ss_dssp EEEEEEET
T ss_pred EEEeCCCC
Confidence 99998743
No 110
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.8e-33 Score=221.83 Aligned_cols=218 Identities=17% Similarity=0.221 Sum_probs=183.8
Q ss_pred ccceeeccCCCcEEEEEEcC--CCCEEEEeecCCeEEEEEccCC---------eeeeeeeeeeeceEEEEEecc--CCeE
Q 023822 25 EVGMSFRDYNGRISSMDFHK--SSSYLVTASDDESIRLYDVTAA---------TCLKTINSKKYGVDLVCFTSH--PTTV 91 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l 91 (276)
+....+.+|..+|++++|+| ++++|++++.||.|++||+.++ +.+..+..|...|.+++|+|+ +.++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 45677889999999999999 6999999999999999999876 567788889999999999999 9999
Q ss_pred EEeccCCCCCceEEEEccCCceeeeec-------------ccCcceEEEEeccC---CCEEEEeeCCCeEEEEeccCcee
Q 023822 92 IYSSKNGWDESLRLLSLHDNKYLRYFK-------------GHHDRVVSLSLCSS---KDCFISGSLDRTVLLWDQRAEKC 155 (276)
Q Consensus 92 ~~~~~~~~d~~i~~~d~~~~~~~~~~~-------------~~~~~i~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~ 155 (276)
++++. |+.|++||+++++.+..+. .|...+.+++|+|+ +.++++++.|+.+.+|+...++.
T Consensus 128 ~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~ 204 (351)
T 3f3f_A 128 ACLGN---DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL 204 (351)
T ss_dssp EEEET---TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE
T ss_pred EEecC---CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce
Confidence 99998 9999999999887554432 57888999999997 88999999999998888877664
Q ss_pred --eeeE--eecCCCeeEecCCC----cEEEEee-CCeEEEEecccCCCC-------------------------------
Q 023822 156 --QGLL--RVQGRPAAAYDDQG----LVFAVAF-GGYIRMFDARKYEKG------------------------------- 195 (276)
Q Consensus 156 --~~~~--~~~~~~~~~~~~~~----~~l~~~~-d~~i~~~d~~~~~~~------------------------------- 195 (276)
...+ +...+.+++|+|++ .++++++ |+.|++||++.....
T Consensus 205 ~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
T 3f3f_A 205 HVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNT 284 (351)
T ss_dssp EEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------
T ss_pred eeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccc
Confidence 3333 45567899999998 6777777 899999999874210
Q ss_pred -----------CeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 196 -----------PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 196 -----------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
......+..|...|++++|+|++++|++++.||.|++|++.+++.+..+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred ceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 12344566788999999999999999999999999999999887766654
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.9e-32 Score=217.80 Aligned_cols=238 Identities=12% Similarity=0.129 Sum_probs=193.8
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEE-EEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYL-VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
.+....+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+. .+.+++|+|+++++++++.. ++.
T Consensus 22 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~--~~~ 97 (391)
T 1l0q_A 22 NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA--SST 97 (391)
T ss_dssp TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT--TTE
T ss_pred CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECC--CCE
Confidence 34555666664 48999999999977 677789999999999999988887665 89999999999988766542 799
Q ss_pred eEEEEccCCceeeeecccCcceEEEEeccCCCEE-EEeeCCCeEEEEeccCceeeeeEe-ecCCCeeEecCCCcEEE-Ee
Q 023822 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVFA-VA 179 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~ 179 (276)
|++||+.+++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||+++++....+. ...+..++|+|+++.++ ++
T Consensus 98 v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp EEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEe
Confidence 999999999888877744 568999999999977 688889999999999998887774 34457899999997764 44
Q ss_pred e-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee---cCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 180 F-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
. ++.|++||+++.+. .... .+...+.+++|+|+|++|++++ .++.|++||+.+++.+..+. .+ ..+.
T Consensus 177 ~~~~~v~~~d~~~~~~----~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~-~~~~ 247 (391)
T 1l0q_A 177 FDSMSISVIDTVTNSV----IDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP---VG-PDPA 247 (391)
T ss_dssp TTTTEEEEEETTTTEE----EEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE---CC-SSEE
T ss_pred CCCCEEEEEECCCCeE----EEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe---cC-CCcc
Confidence 4 79999999987542 2222 2445789999999999999887 68999999999999988887 33 4578
Q ss_pred EEEECCCCcEE-EEecCCCCC
Q 023822 256 EASFSPEGMFV-ISGRVSPFS 275 (276)
Q Consensus 256 ~~~~s~~g~~l-~~~~~dg~v 275 (276)
+++|+|+|++| ++++.|+.+
T Consensus 248 ~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 248 GIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEE
T ss_pred EEEEccCCCEEEEEcCCCCEE
Confidence 99999999877 666777754
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.3e-32 Score=222.74 Aligned_cols=228 Identities=18% Similarity=0.216 Sum_probs=192.0
Q ss_pred EEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee--eeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 37 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
++.|+|+++ +.||+| .|++|+|||..+++....+. .|...|++++|+|++++|++++. |+.|++||+.+++.+
T Consensus 108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEE
T ss_pred ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcEE
Confidence 567999975 577776 48999999999998877665 56678999999999999999998 999999999999999
Q ss_pred eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCcee-eeeE--eecCCCeeEecCCCcEEEEee-CCeEEEEecc
Q 023822 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDAR 190 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~ 190 (276)
..+.+|...+.++++ ++..|++++.|+.+++||.+.... +..+ +...+..+.++|++.+++++. |+.+++|+..
T Consensus 183 ~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 183 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 999999999998877 467999999999999999887543 3334 455677899999999888887 8999999998
Q ss_pred cCCCCCeeeeeecCCCCCceEEEECCCC-cEEEE--eecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEE
Q 023822 191 KYEKGPFDIFSVGGDISDANVVKFSNDG-RLMLL--TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (276)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 267 (276)
.++...........|...|.+++|+|.+ .++++ |+.|+.|++||+.+++++..+. +...+.++.|+|+++.++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----~~~~v~~~~~~~~~~~lv 336 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELI 336 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE----CSSCEEEEEEETTTTEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec----cccceeeeeecCCCCeEE
Confidence 8765555566677888999999999975 45554 4579999999999999999887 457899999999999887
Q ss_pred Eec--CCCCC
Q 023822 268 SGR--VSPFS 275 (276)
Q Consensus 268 ~~~--~dg~v 275 (276)
+++ .||.|
T Consensus 337 ~~sg~~d~~I 346 (420)
T 4gga_A 337 SGHGFAQNQL 346 (420)
T ss_dssp EEECTTTCCE
T ss_pred EEEecCCCEE
Confidence 754 67754
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=5e-32 Score=221.50 Aligned_cols=235 Identities=11% Similarity=0.161 Sum_probs=197.6
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
.+.+|.+.|.+++|+|+++++++++.|+.|++||+++++.+..+..|...+.+++|+|+++.+++++.. ++.|++||+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~d~ 241 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI--SEDISVIDR 241 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT--TTEEEEEET
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC--CCcEEEEEC
Confidence 456899999999999999999999999999999999999999998888899999999999988665531 899999999
Q ss_pred cCCceeeeecccCcceEEEEeccCCCEEEEee--------CCCeEEEEeccCceeeeeE-eecCCCeeEecCCCcEE-EE
Q 023822 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGS--------LDRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVF-AV 178 (276)
Q Consensus 109 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l-~~ 178 (276)
++++.+..+..+ ..+.+++|+|+++++++++ .|+.|++||+++++....+ +...+..++|+|+++.+ ++
T Consensus 242 ~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 242 KTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE
T ss_pred CCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE
Confidence 999888877654 5589999999999998888 4889999999998877766 44567789999999644 44
Q ss_pred ee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeec---------------CCcEEEEECCCCcEEE
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM---------------EGHIHVLDSFRGTLLS 242 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~ 242 (276)
+. ++.|++||+++++. ...+ .+...+.+++|+|+|++|++++. ||.|++||+.+++.+.
T Consensus 321 ~~~~~~v~v~d~~~~~~----~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKV----QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp ETTTTEEEEEETTTTEE----EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred ecCCCEEEEEECCCCcE----EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 44 89999999986542 2222 25567899999999998888876 5799999999999998
Q ss_pred EeecCCCCCCceEEEEECCCCcEEEEecC-CCCC
Q 023822 243 TYNVKPVSRNSTLEASFSPEGMFVISGRV-SPFS 275 (276)
Q Consensus 243 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~v 275 (276)
.+. ....+.+++|+|+|++|++++. |+.+
T Consensus 396 ~~~----~~~~~~~~~~s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 396 FWE----AGNQPTGLDVSPDNRYLVISDFLDHQI 425 (433)
T ss_dssp EEE----CSSSEEEEEECTTSCEEEEEETTTTEE
T ss_pred Eec----CCCCCceEEEcCCCCEEEEEECCCCeE
Confidence 887 3567899999999999988764 7754
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-33 Score=243.29 Aligned_cols=212 Identities=12% Similarity=0.145 Sum_probs=181.6
Q ss_pred ccccceeeccCCCcEEEEEEcCC--CCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEecc--CCeEEEecc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKS--SSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSH--PTTVIYSSK 96 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~ 96 (276)
..+....+.+|.++|++++|+|+ +++|++|+.||.|++||+.+++ ....+..|...|.+++|+|+ +..+++++.
T Consensus 42 ~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 42 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC
Confidence 45667788999999999999987 9999999999999999999887 67778889999999999999 999999998
Q ss_pred CCCCCceEEEEccCCc--eeeeecccCcceEEEEecc-------------CCCEEEEeeCCCeEEEEeccCce----eee
Q 023822 97 NGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCS-------------SKDCFISGSLDRTVLLWDQRAEK----CQG 157 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~i~iwd~~~~~----~~~ 157 (276)
||.|++||++++. ....+.+|...|.+++|+| +++++++++.||.|++||++++. ...
T Consensus 122 ---dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 198 (753)
T 3jro_A 122 ---DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 198 (753)
T ss_dssp ---TSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred ---CCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeee
Confidence 9999999998873 3456678999999999999 58899999999999999998763 333
Q ss_pred eE--eecCCCeeEecCC---CcEEEEee-CCeEEEEecccCCCCC-eeeeeecCCCCCceEEEECCCCcEEEEeecCCcE
Q 023822 158 LL--RVQGRPAAAYDDQ---GLVFAVAF-GGYIRMFDARKYEKGP-FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 230 (276)
Q Consensus 158 ~~--~~~~~~~~~~~~~---~~~l~~~~-d~~i~~~d~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 230 (276)
.+ +...+.+++|+|+ +.++++++ |+.|++||++...... ........|...+.+++|+|+|+++++++.||.|
T Consensus 199 ~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 199 TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp EECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE
T ss_pred eecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE
Confidence 44 4566889999999 88888877 9999999998864221 1233445678899999999999999999999999
Q ss_pred EEEECCC
Q 023822 231 HVLDSFR 237 (276)
Q Consensus 231 ~i~d~~~ 237 (276)
++|++.+
T Consensus 279 ~vwd~~~ 285 (753)
T 3jro_A 279 TLWKENL 285 (753)
T ss_dssp ECCBCCS
T ss_pred EEEecCC
Confidence 9999874
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4.2e-32 Score=209.17 Aligned_cols=248 Identities=11% Similarity=0.168 Sum_probs=178.3
Q ss_pred hccccceeeccCCCc----EEEEEEcCCCC---EEEEeecCCeEEEEEccCC---eeeeeeeeeee--------------
Q 023822 22 QSMEVGMSFRDYNGR----ISSMDFHKSSS---YLVTASDDESIRLYDVTAA---TCLKTINSKKY-------------- 77 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~----v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~-------------- 77 (276)
..++.+.+++...+. +.++-|-..+- .++++++ ..|++|+..++ +++.++..|+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 101 (356)
T 2w18_A 23 GNLQLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNL 101 (356)
T ss_dssp -CEEEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSC
T ss_pred ceeeeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccce
Confidence 456677777765543 44565654333 5677766 58999999988 77777766554
Q ss_pred -----------ceEEEEEecc----CCeEEEecc-----------------CCCCCceEEEEc-cCCceeeeecccCcce
Q 023822 78 -----------GVDLVCFTSH----PTTVIYSSK-----------------NGWDESLRLLSL-HDNKYLRYFKGHHDRV 124 (276)
Q Consensus 78 -----------~v~~~~~~~~----~~~l~~~~~-----------------~~~d~~i~~~d~-~~~~~~~~~~~~~~~i 124 (276)
.|..++++|+ ++.++.++. .+.|+.|++|++ .+++.+..+..|...+
T Consensus 102 ~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v 181 (356)
T 2w18_A 102 VCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEE 181 (356)
T ss_dssp EEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSS
T ss_pred eeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCce
Confidence 4566777778 666766542 234889999998 5577888888899999
Q ss_pred EEEEecc---CCCEEEEeeCCCeEEEEeccCceeeeeEeec-----CCCeeEecCCCcEEE------------Eee-CCe
Q 023822 125 VSLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-----GRPAAAYDDQGLVFA------------VAF-GGY 183 (276)
Q Consensus 125 ~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~------------~~~-d~~ 183 (276)
..++|+| ++.+|++++.|++|++||++++++++.+..+ .+.+++|+|++.+++ +++ |++
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 9999998 6789999999999999999999999988532 244668999998763 344 899
Q ss_pred EEEEecccCCCCCeeeee-ecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE-EEEECC
Q 023822 184 IRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL-EASFSP 261 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~s~ 261 (276)
|++||..+++........ ..+|...+.+..+ ++.++++++.|++|+|||+.+++++.++. +|...+. .++|+|
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~---gH~~~vvs~vafSP 336 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLP---PVSDQHWSFVKWSG 336 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEEC---CC--CCCCEEEECS
T ss_pred EEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEec---CCCCCeEEEEEECC
Confidence 999999876531111111 1244444433333 47889999999999999999999999998 6766555 589999
Q ss_pred CCcEEEEecCCCCC
Q 023822 262 EGMFVISGRVSPFS 275 (276)
Q Consensus 262 ~g~~l~~~~~dg~v 275 (276)
||++|++|+.|++|
T Consensus 337 DG~~LaSGS~D~TI 350 (356)
T 2w18_A 337 TDSHLLAGQKDGNI 350 (356)
T ss_dssp SSSEEEEECTTSCE
T ss_pred CCCEEEEEECCCcE
Confidence 99999999999986
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=221.65 Aligned_cols=228 Identities=10% Similarity=0.002 Sum_probs=172.9
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEcc---------CCeeeeeee-eeeeceEEEEEec--cCCeEEEeccCCCCC
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVT---------AATCLKTIN-SKKYGVDLVCFTS--HPTTVIYSSKNGWDE 101 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~d~ 101 (276)
...|.++.|+|+ +++++.|++|++|+.. +++.+..+. .|..+|.+++|+| +++++++++. |+
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~---dg 149 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN---RG 149 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEET---TC
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC---CC
Confidence 356778888887 9999999999999765 344344433 4557899999999 9999999998 99
Q ss_pred ceEEEEccCCceeeeec-ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee-eeE---eecCCCeeEecCCCcEE
Q 023822 102 SLRLLSLHDNKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLL---RVQGRPAAAYDDQGLVF 176 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~---~~~~~~~~~~~~~~~~l 176 (276)
.|++||+++++...... .|...+.+++|+|++++|++|+.||.|++||+++++.. ..+ |...+.+++|+|++.+|
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 99999999998876663 45568999999999999999999999999999998876 444 34667899999999999
Q ss_pred EEeeCCeEEEEecccCCCCCeeeeeecCCCCCce--EEEECCCCcEEEEeec-CCcEEEEECCCCcEEEEeecCCCCCCc
Q 023822 177 AVAFGGYIRMFDARKYEKGPFDIFSVGGDISDAN--VVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNS 253 (276)
Q Consensus 177 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (276)
++++++.|++||+++.+... .+..+..+...+. +++|+|+|++|++++. |+.|++|++.+....... .+
T Consensus 230 ~s~~~~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~-------~~ 301 (343)
T 3lrv_A 230 VVECDQTVVCFDLRKDVGTL-AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK-------DE 301 (343)
T ss_dssp EEEESSBEEEEETTSSTTCB-SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE-------EE
T ss_pred EEEeCCeEEEEEcCCCCcce-eecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe-------cC
Confidence 99998899999999865411 1111112333444 6999999999999988 999999998765433221 34
Q ss_pred eEEEEECC---CCcEEEEecCCCCC
Q 023822 254 TLEASFSP---EGMFVISGRVSPFS 275 (276)
Q Consensus 254 v~~~~~s~---~g~~l~~~~~dg~v 275 (276)
+..++|.+ +++.|++++.||.+
T Consensus 302 ~~~~~~~~~~~~~~~l~~~~~d~~~ 326 (343)
T 3lrv_A 302 ESALCLQSDTADFTDMDVVCGDGGI 326 (343)
T ss_dssp EEECCC----CCCCEEEEEEETTEE
T ss_pred ceeEecCccccccceeEEEecCCce
Confidence 56667776 66777777776643
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6e-32 Score=218.95 Aligned_cols=211 Identities=14% Similarity=0.198 Sum_probs=173.6
Q ss_pred ccCCCcEEEEEEcC-CCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccC---CeEEEeccCCCCCceEEE
Q 023822 31 RDYNGRISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHP---TTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 31 ~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~~~d~~i~~~ 106 (276)
.+|...|.+++|+| ++++|++++.||.|++||+.+++....+. +...+.++.+++.+ ..+++++. ++.|++|
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~ 171 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---GPKVQLC 171 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES---SSSEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC---CCeEEEE
Confidence 36999999999999 78899999999999999999998887776 56689999999854 48999888 9999999
Q ss_pred EccCCceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCce-eeeeE-----------------eecCCCee
Q 023822 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEK-CQGLL-----------------RVQGRPAA 167 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~-~~~~~-----------------~~~~~~~~ 167 (276)
|+++++.+..+..|...|.+++|+|+++ +|++++.||.|++||++... ....+ +...+.++
T Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 172 DLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred eCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 9999999999999999999999999998 58999999999999998764 22211 34456789
Q ss_pred EecCCCcEEEEee-CCeEEEEecccCCCCC-------------------------------------------eeeeeec
Q 023822 168 AYDDQGLVFAVAF-GGYIRMFDARKYEKGP-------------------------------------------FDIFSVG 203 (276)
Q Consensus 168 ~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~-------------------------------------------~~~~~~~ 203 (276)
+|+|++.+++++. |+.|++||+++++... .....+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 9999998888777 8999999998754211 1233456
Q ss_pred CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 204 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.|...|.+++|+|++++|++++.||.|++||+.+++.+....
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 373 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDD 373 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCC
Confidence 788899999999999999999999999999999998876554
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6e-32 Score=220.96 Aligned_cols=212 Identities=18% Similarity=0.263 Sum_probs=178.5
Q ss_pred cccceeeccCCCcEEEEEEcCCCC-EEEEeecCCeEEEEEccCCee-------eeeeeeeeeceEEEEEec-cCCeEEEe
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATC-------LKTINSKKYGVDLVCFTS-HPTTVIYS 94 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~ 94 (276)
.+....+.+|...|++++|+|++. +|++|+.||.|++|++.++.. ...+..|...|.+++|+| ++..++++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 566778899999999999999988 999999999999999987322 455668888999999999 66778888
Q ss_pred ccCCCCCceEEEEccCC---ceeeeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccC-ceeeeeE--eecCCCee
Q 023822 95 SKNGWDESLRLLSLHDN---KYLRYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRA-EKCQGLL--RVQGRPAA 167 (276)
Q Consensus 95 ~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~--~~~~~~~~ 167 (276)
+. |+.|++||++++ +....+..|...|.+++|+|+++ +|++++.||.|++||++. ...+..+ +...+.++
T Consensus 251 ~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 251 AD---DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp ET---TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred eC---CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 87 999999999987 56777888999999999999987 689999999999999998 4455555 55668899
Q ss_pred EecCCCc-EEEEee-CCeEEEEecccCCCC----------CeeeeeecCCCCCceEEEECCCCc-EEEEeecCCcEEEEE
Q 023822 168 AYDDQGL-VFAVAF-GGYIRMFDARKYEKG----------PFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLD 234 (276)
Q Consensus 168 ~~~~~~~-~l~~~~-d~~i~~~d~~~~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d 234 (276)
+|+|++. ++++++ |+.|++||++..... +.......+|...|.+++|+|+++ +|++++.||.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 9999984 565555 999999999874321 234566678888999999999998 899999999999999
Q ss_pred CCCC
Q 023822 235 SFRG 238 (276)
Q Consensus 235 ~~~~ 238 (276)
+...
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 8653
No 119
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-31 Score=208.41 Aligned_cols=207 Identities=14% Similarity=0.189 Sum_probs=178.0
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEec-cCCeEEEeccCCCCCc
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDES 102 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~ 102 (276)
.+....+.+|...|.+++| ++++|++++.|+.|++|| .++....+..|...+.++.|.| +++.+++++. |+.
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~ 166 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA---DKT 166 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET---TSC
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC---CCC
Confidence 3556778899999999999 567999999999999999 6788888899999999999998 8999999998 999
Q ss_pred eEEEEccCCceeeeecc-cCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEe
Q 023822 103 LRLLSLHDNKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVA 179 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 179 (276)
|++|| ..+....+.. |...+.+++|+|++. +++++.|+.|++||+++++.+..+ +...+.+++|+|++++++++
T Consensus 167 i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 243 (313)
T 3odt_A 167 IKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCG 243 (313)
T ss_dssp EEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEe
Confidence 99999 4556666766 899999999999998 999999999999999999888877 45567899999999877777
Q ss_pred eCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 180 FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 180 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.|+.|++||+++++. ...+..|..++.+++|+|+++ +++++.||.|++||+.+++......
T Consensus 244 ~dg~v~iwd~~~~~~----~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 244 EDRTVRIWSKENGSL----KQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp TTSEEEEECTTTCCE----EEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC---
T ss_pred cCCEEEEEECCCCce----eEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhh
Confidence 799999999988654 555667888999999999998 6678999999999999887766554
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4.4e-32 Score=209.07 Aligned_cols=193 Identities=12% Similarity=0.095 Sum_probs=147.2
Q ss_pred cEEEEEEcCC----CCEEEEeec--------------------CCeEEEEEc-cCCeeeeeeeeeeeceEEEEEec---c
Q 023822 36 RISSMDFHKS----SSYLVTASD--------------------DESIRLYDV-TAATCLKTINSKKYGVDLVCFTS---H 87 (276)
Q Consensus 36 ~v~~~~~~~~----~~~l~~~~~--------------------d~~i~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~ 87 (276)
.|.+++++|+ ++.+++++. |+.|++|++ .+++.+..+..|...+..++|++ +
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 5566667777 777776553 888999998 45888888888888899999999 6
Q ss_pred CCeEEEeccCCCCCceEEEEccCCceeeeecccC---cceEEEEeccCCCEE------------EEeeCCCeEEEEeccC
Q 023822 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH---DRVVSLSLCSSKDCF------------ISGSLDRTVLLWDQRA 152 (276)
Q Consensus 88 ~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~~~~~d~~i~iwd~~~ 152 (276)
+..|++++. |++|++||+.+++.+.++.+|. ..+.+++|+|++.++ ++|+.|++|++||..+
T Consensus 193 ~~~LaSgS~---D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 193 QEALLGTTI---MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp TTEEEEEET---TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CceEEEecC---CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 789999998 9999999999999999998654 357778999999876 5678899999999999
Q ss_pred ceeeeeEe-----ecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCce-EEEECCCCcEEEEee
Q 023822 153 EKCQGLLR-----VQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDAN-VVKFSNDGRLMLLTT 225 (276)
Q Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~ 225 (276)
++.+..+. .+....+..+.++.++++++ |++|++||+++++. ...+.+|...+. .++|+|+|++|++|+
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~----l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQC----TALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSE----EEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred CEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcE----EEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 98876542 11112333333355677776 99999999998775 666777766555 689999999999999
Q ss_pred cCCcEEEEEC
Q 023822 226 MEGHIHVLDS 235 (276)
Q Consensus 226 ~dg~i~i~d~ 235 (276)
.|++|+|||+
T Consensus 346 ~D~TIklWd~ 355 (356)
T 2w18_A 346 KDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEecC
Confidence 9999999995
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.8e-31 Score=205.69 Aligned_cols=228 Identities=18% Similarity=0.198 Sum_probs=189.2
Q ss_pred EEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee--eeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 37 ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 37 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
.++|+||+++ +||+| .|++|+|||+++++++..+. .|...|.+++|+|+++++++++. |+.|++||+++++.+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeE
Confidence 5789999875 77765 58999999999999887765 56678999999999999999998 999999999999999
Q ss_pred eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee-eeE--eecCCCeeEecCCCcEEEEee-CCeEEEEecc
Q 023822 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDAR 190 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~ 190 (276)
..+.+|...+.++.+ ++..+++++.++.+++|+....... ..+ +...+..+.+.+++.+++++. |+.|++||++
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 999999998877655 5679999999999999998876443 333 455567889999998888877 8999999999
Q ss_pred cCCCCCeeeeeecCCCCCceEEEECCCCcE---EEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEE
Q 023822 191 KYEKGPFDIFSVGGDISDANVVKFSNDGRL---MLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (276)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 267 (276)
+++...........+...+..++++|++.. +++++.++.|++||........... +...+..+.|+|+++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELI 256 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEE
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc----ceeeeeeeeecccccceE
Confidence 877554455666677889999999997643 3456788999999999988877766 678899999999998877
Q ss_pred Eec--CCCCC
Q 023822 268 SGR--VSPFS 275 (276)
Q Consensus 268 ~~~--~dg~v 275 (276)
+++ .||.|
T Consensus 257 ~~sg~~d~~i 266 (318)
T 4ggc_A 257 SGHGFAQNQL 266 (318)
T ss_dssp EEECTTTCCE
T ss_pred EEEEcCCCEE
Confidence 654 67764
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3e-31 Score=216.88 Aligned_cols=235 Identities=12% Similarity=0.128 Sum_probs=192.3
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeee-----eeeeeeeceEEEEEeccCCeEEEeccCCC
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-----TINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 99 (276)
+....+..+ ..+.+++|+|++.++++++.++.|++||+.+++... .+..|...+.+++|++++..+++++.
T Consensus 114 ~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~--- 189 (433)
T 3bws_A 114 RFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ--- 189 (433)
T ss_dssp EEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG---
T ss_pred eEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC---
Confidence 344445544 446699999977788888889999999999998876 34467778999999999999999988
Q ss_pred CCceEEEEccCCceeeeecccCcceEEEEeccCCCEEE-EeeCCCeEEEEeccCceeeeeEe-ecCCCeeEecCCCcEEE
Q 023822 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVFA 177 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 177 (276)
++.|++||+++++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++....+. ...+..++++|+++.++
T Consensus 190 d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELY 269 (433)
T ss_dssp GTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEE
T ss_pred CCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEE
Confidence 99999999999999999988999999999999999775 55579999999999988877663 33467899999997776
Q ss_pred Eee---------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEE-EEeecCCcEEEEECCCCcEEEEeecC
Q 023822 178 VAF---------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVK 247 (276)
Q Consensus 178 ~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (276)
++. |+.|++||+++++. .....+...+.+++|+|+++.+ ++++.|+.|++||+.+++.+..+.
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-- 342 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEKL-----IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-- 342 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTEE-----EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE--
T ss_pred EEECCCCccccCCCeEEEEECCCCcE-----EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec--
Confidence 665 67999999987542 2222344578899999999755 566889999999999999888876
Q ss_pred CCCCCceEEEEECCCCcEEEEecCC
Q 023822 248 PVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 248 ~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
+...+.+++|+|+|++|++++.+
T Consensus 343 --~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 343 --VFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp --CSSSEEEEEECTTSSEEEEEECC
T ss_pred --CCCCCCeEEEcCCCCEEEEEecC
Confidence 56789999999999988887763
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.2e-32 Score=218.29 Aligned_cols=203 Identities=10% Similarity=0.043 Sum_probs=153.5
Q ss_pred ccceeeccCCCcEEEEEEcC--------CCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCC-eEEEec
Q 023822 25 EVGMSFRDYNGRISSMDFHK--------SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPT-TVIYSS 95 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~--------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~ 95 (276)
.....+.+|.+.|++++|+| |+++||+++.|++|+|||+.++.++..+..|..++.+++|+|++. +|++++
T Consensus 127 ~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 127 HVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp EEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE
T ss_pred eeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC
Confidence 34456789999999999998 789999999999999999999988888888999999999999875 688888
Q ss_pred cCCCCCceEEEEccCCceeee-------------------------ecccCcceEEEEec-cCCCEEEEeeCCCeEEEEe
Q 023822 96 KNGWDESLRLLSLHDNKYLRY-------------------------FKGHHDRVVSLSLC-SSKDCFISGSLDRTVLLWD 149 (276)
Q Consensus 96 ~~~~d~~i~~~d~~~~~~~~~-------------------------~~~~~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd 149 (276)
. |+.|++||+++++.... ..+|...+.++.|. |+++.+++++.|+++++||
T Consensus 207 ~---d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 207 R---NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp T---TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred C---CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 7 99999999987754322 23577788899987 7999999999999999999
Q ss_pred ccCceeeeeEee--c------------------CCCeeEecC--CCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCC
Q 023822 150 QRAEKCQGLLRV--Q------------------GRPAAAYDD--QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDI 206 (276)
Q Consensus 150 ~~~~~~~~~~~~--~------------------~~~~~~~~~--~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~ 206 (276)
+...+....+.. . ......++| ++.++++++ |+.|++||+.+++. ......|.
T Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~----~~~~~~~~ 359 (393)
T 4gq1_A 284 LFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS----NSIPIQLG 359 (393)
T ss_dssp C-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC----CEEEEECS
T ss_pred CccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE----EEEecCCC
Confidence 987665444311 1 111233333 345666666 89999999988665 34445677
Q ss_pred CCceEEEECCCCcEEEEeecCCcEEEEEC
Q 023822 207 SDANVVKFSNDGRLMLLTTMEGHIHVLDS 235 (276)
Q Consensus 207 ~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 235 (276)
.+|.+++|+|+|++||+++.+| +.+|.+
T Consensus 360 ~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 360 MPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 8999999999999999998776 556654
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.4e-30 Score=206.27 Aligned_cols=225 Identities=12% Similarity=0.130 Sum_probs=173.2
Q ss_pred CcEEEEEEcCCCCEE-EEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC-c
Q 023822 35 GRISSMDFHKSSSYL-VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-K 112 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~-~ 112 (276)
..+..+++.++++.+ ++++.|++|++||..+++++..+. +..+|.++.++++ .++++. ++.|++||+.++ +
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~~~----~~~i~i~d~~~~~~ 131 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSRE--FIVVSY----GDVISVFKFGNPWK 131 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--EEEEEE----TTEEEEEESSTTCC
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCC--EEEEEE----cCEEEEEECCCCce
Confidence 357888999988877 567788999999999999988887 5568999999765 455554 889999999988 6
Q ss_pred eeeeecccCcceEEEEeccCCCEEEE--eeCCCeEEEEeccCce----------------eeeeE--eecCCCeeEecCC
Q 023822 113 YLRYFKGHHDRVVSLSLCSSKDCFIS--GSLDRTVLLWDQRAEK----------------CQGLL--RVQGRPAAAYDDQ 172 (276)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d~~i~iwd~~~~~----------------~~~~~--~~~~~~~~~~~~~ 172 (276)
.+..+.. +...+++++ .+++. ++.||.|++||+++++ ....+ |...+.+++|+|+
T Consensus 132 ~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~ 206 (355)
T 3vu4_A 132 RITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK 206 (355)
T ss_dssp BSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred eeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence 6666654 444566666 55665 6889999999999765 13444 5667889999999
Q ss_pred CcEEEEee-CCe-EEEEecccCCCCCeeeeeec-C-CCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEE--E---
Q 023822 173 GLVFAVAF-GGY-IRMFDARKYEKGPFDIFSVG-G-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS--T--- 243 (276)
Q Consensus 173 ~~~l~~~~-d~~-i~~~d~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~--- 243 (276)
+.+|++++ |++ |++||+++++. ...+. + |...|.+++|+|+|++|++++.|+.|++||+.++.... .
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~~~----~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~ 282 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDGVL----VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKG 282 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTCCE----EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTT
T ss_pred CCEEEEEeCCCCEEEEEECCCCcE----EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccc
Confidence 99998888 898 99999998654 44454 4 88999999999999999999999999999997653211 1
Q ss_pred ---------------eecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 244 ---------------YNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 244 ---------------~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+............++|++||++|++++.||.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~ 329 (355)
T 3vu4_A 283 WINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMI 329 (355)
T ss_dssp TEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEE
T ss_pred eeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeE
Confidence 11111122334679999999999999999854
No 125
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=208.04 Aligned_cols=203 Identities=13% Similarity=0.168 Sum_probs=165.0
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEE--eccCCeEEEeccCCCCCce
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCF--TSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~~~d~~i 103 (276)
....+.+|.++|++++|+|++++|++++.||.|++||+.+++.+. +..|...|.+++| ++++..+++++. |+.|
T Consensus 78 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~---dg~i 153 (368)
T 3mmy_A 78 IPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSW---DKTL 153 (368)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEET---TSEE
T ss_pred eEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccC---CCcE
Confidence 336788999999999999999999999999999999999988766 5678899999999 889999999998 9999
Q ss_pred EEEEccCCceeeeecccC-----------------------------------------cceEEEEeccCCCE----EEE
Q 023822 104 RLLSLHDNKYLRYFKGHH-----------------------------------------DRVVSLSLCSSKDC----FIS 138 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~-----------------------------------------~~i~~~~~~~~~~~----l~~ 138 (276)
++||+++++.+..+..+. ..+.++.+.++... +++
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE
Confidence 999999887766655332 22344455444433 999
Q ss_pred eeCCCeEEEEeccCc---eeeeeE--eec------------CCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeee
Q 023822 139 GSLDRTVLLWDQRAE---KCQGLL--RVQ------------GRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIF 200 (276)
Q Consensus 139 ~~~d~~i~iwd~~~~---~~~~~~--~~~------------~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~ 200 (276)
++.|+.|++||++.. .....+ +.. .+.+++|+|++++|++++ |+.|++||+++++. ..
T Consensus 234 ~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~----~~ 309 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK----LK 309 (368)
T ss_dssp EETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE----EE
T ss_pred ecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE----EE
Confidence 999999999999876 333333 222 578999999998888777 99999999997654 56
Q ss_pred eecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 201 SVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 201 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
.+..|..+|.+++|+|+|++|++++.|+..+.|++.
T Consensus 310 ~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp ECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 677888999999999999999999998865555543
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=8.3e-29 Score=199.79 Aligned_cols=211 Identities=13% Similarity=0.151 Sum_probs=174.3
Q ss_pred CEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEE-EeccCCCCCceEEEEccCCceeeeecccCcceE
Q 023822 47 SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI-YSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125 (276)
Q Consensus 47 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~ 125 (276)
.++++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++++ +++. ++.|++||+.+++.+..+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~---d~~i~v~d~~~~~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAH---SNDVSIIDTATNNVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGG---GTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCC---CCeEEEEECCCCeEEEEEECCC-Ccc
Confidence 467888999999999999999988888765 589999999999874 5545 9999999999999888887555 899
Q ss_pred EEEeccCCCEEEE-eeCCCeEEEEeccCceeeeeEe-ecCCCeeEecCCCcEE-EEee-CCeEEEEecccCCCCCeeeee
Q 023822 126 SLSLCSSKDCFIS-GSLDRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVF-AVAF-GGYIRMFDARKYEKGPFDIFS 201 (276)
Q Consensus 126 ~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~~-d~~i~~~d~~~~~~~~~~~~~ 201 (276)
+++|+|++++++. ++.++.|++||+.+++....+. ...+..++|+|+++.+ +++. ++.|++||+++++. ...
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~ 153 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----INT 153 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEE
Confidence 9999999997754 5567999999999998887773 3446789999999866 4555 89999999987543 333
Q ss_pred ecCCCCCceEEEECCCCcEE-EEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 202 VGGDISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 202 ~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
+..+ ..+..++|+|++++| ++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++.
T Consensus 154 ~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 154 VSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp EECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEE
T ss_pred EecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEec
Confidence 3333 457899999999887 567788999999999999888876 5678999999999999988873
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.4e-28 Score=199.93 Aligned_cols=227 Identities=9% Similarity=0.064 Sum_probs=179.7
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeecCC---eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASDDE---SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
..+.+.+|...|.+++|+|+|++|++++.++ .|++||+.+++.. .+..+...+.+++|+|+++.|+.......+..
T Consensus 170 ~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 170 NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 4566778999999999999999999999875 9999999988765 46667778999999999998885433211445
Q ss_pred eEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeC-CC--eEEEEeccCceeeeeE-eecCCCeeEecCCCcEEEE
Q 023822 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-DR--TVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVFAV 178 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 178 (276)
|++||+.+++. ..+..|...+.+++|+|++++|++++. ++ .|++||+.+++..... +...+..++|+|++++|+.
T Consensus 249 i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~ 327 (415)
T 2hqs_A 249 LYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVM 327 (415)
T ss_dssp EEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEE
T ss_pred EEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEE
Confidence 99999988775 566778889999999999998888876 44 6888898887643322 3344567899999998877
Q ss_pred ee-C---CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC---cEEEEECCCCcEEEEeecCCCCC
Q 023822 179 AF-G---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG---HIHVLDSFRGTLLSTYNVKPVSR 251 (276)
Q Consensus 179 ~~-d---~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~ 251 (276)
+. + ..|++||+.+++. ..+..+. .+.+++|+|+|++|++++.++ .|++||+. ++....+. .+.
T Consensus 328 ~~~~~g~~~i~~~d~~~~~~-----~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~---~~~ 397 (415)
T 2hqs_A 328 VSSNGGQQHIAKQDLATGGV-----QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLP---ATD 397 (415)
T ss_dssp EEECSSCEEEEEEETTTCCE-----EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECC---CSS
T ss_pred EECcCCceEEEEEECCCCCE-----EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEee---CCC
Confidence 76 3 5899999987542 2333343 789999999999999988776 79999986 55566666 688
Q ss_pred CceEEEEECCCCc
Q 023822 252 NSTLEASFSPEGM 264 (276)
Q Consensus 252 ~~v~~~~~s~~g~ 264 (276)
+.|.+++|+|...
T Consensus 398 ~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 398 GQVKFPAWSPYLH 410 (415)
T ss_dssp SEEEEEEECCCCC
T ss_pred CCCcCCccccccc
Confidence 9999999999754
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=4.8e-29 Score=202.63 Aligned_cols=234 Identities=10% Similarity=0.087 Sum_probs=181.2
Q ss_pred eeeccCCCcEEEEEEcC--------------CCCEEEEeecC------CeEEEEEccCCeeeeeeeeeeeceEEEEEecc
Q 023822 28 MSFRDYNGRISSMDFHK--------------SSSYLVTASDD------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSH 87 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~--------------~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 87 (276)
..+.+|...+..+++++ .+..++.++.+ +.|++||+. +.....+..|...+.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCC
Confidence 55778888888777764 15667766654 799999997 4556778888889999999999
Q ss_pred CCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEE-EeeCCC--eEEEEeccCceeeeeE-eecC
Q 023822 88 PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDR--TVLLWDQRAEKCQGLL-RVQG 163 (276)
Q Consensus 88 ~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~--~i~iwd~~~~~~~~~~-~~~~ 163 (276)
++.+++++..+.+..|++||+.+++.. .+..|...+.+++|+|++++|+ +++.++ .|++||+++++..... +...
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~ 268 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN 268 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCc
Confidence 999999987222359999999998765 4666888999999999999877 666655 4999999987764333 3345
Q ss_pred CCeeEecCCCcEEEEee--CC--eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC---CcEEEEECC
Q 023822 164 RPAAAYDDQGLVFAVAF--GG--YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME---GHIHVLDSF 236 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~~--d~--~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~ 236 (276)
+..++|+|+++.|+.++ ++ .|++||+.+++. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-----QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-----EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-----EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 66899999999777766 34 788889877542 2233455678899999999999988764 589999999
Q ss_pred CCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 237 RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+++.. .+. .+. .+.+++|+|||++|++++.++
T Consensus 344 ~~~~~-~l~---~~~-~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 344 TGGVQ-VLS---STF-LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp TCCEE-ECC---CSS-SCEEEEECTTSSEEEEEEEET
T ss_pred CCCEE-Eec---CCC-CcCCeEEcCCCCEEEEEEcCC
Confidence 88774 343 233 899999999999999888765
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=2.7e-28 Score=189.00 Aligned_cols=237 Identities=11% Similarity=0.080 Sum_probs=175.7
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccC-Ceeeeeeeee-eeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
.+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|+++.++++.... ++...+|
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~l~ 113 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVE-FGKSAIY 113 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTT-TSSCEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCC-CCcceEE
Confidence 4556889999999999999999986 78999999998 7776666555 36789999999999999988411 3455555
Q ss_pred Ec--cCCceeeeecccCcceEEEEeccCCCEEE-EeeCCCeEEEEecc--CceeeeeE-eecCCCeeEecCCCcEEEEee
Q 023822 107 SL--HDNKYLRYFKGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQR--AEKCQGLL-RVQGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 107 d~--~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~--~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 180 (276)
.+ .+++ ...+..+ ..+..++|+|++++|+ ++..++.+++|+++ +++..... +...+..+.|+|+++.++.+.
T Consensus 114 ~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 114 LLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 54 4444 3444433 3488999999999777 77889999999864 33332222 334567899999998766554
Q ss_pred --CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----------CcEEEEECCCCcEEEEeecC
Q 023822 181 --GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----------GHIHVLDSFRGTLLSTYNVK 247 (276)
Q Consensus 181 --d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~ 247 (276)
++.+++|++...... ...+..+...+..++|+|+|++|++++.+ +.|++||+.+++........
T Consensus 192 ~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSS---VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp CTTSSCEEEEEETTSSC---EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE
T ss_pred cCCCCccEEEECCCCCC---cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccC
Confidence 788999988632221 34455566778899999999999888765 56999999888764333211
Q ss_pred CCCCCceEEEEECCCCcEEEEecCCC
Q 023822 248 PVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 248 ~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
++...+..++|+|+|++|++++.+.
T Consensus 269 -~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 -GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp -ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred -CCCcccccceECCCCCEEEEEEecc
Confidence 3677889999999999988877664
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=4e-27 Score=204.75 Aligned_cols=232 Identities=11% Similarity=0.048 Sum_probs=181.9
Q ss_pred CCcEEEEEEcCCCCEEEEeec-CC-----eEEEEEccCCeeeeeeeeee------------------------eceEEEE
Q 023822 34 NGRISSMDFHKSSSYLVTASD-DE-----SIRLYDVTAATCLKTINSKK------------------------YGVDLVC 83 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~-d~-----~i~iwd~~~~~~~~~~~~~~------------------------~~v~~~~ 83 (276)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+. ..+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 89999999988766665443 2378999
Q ss_pred EeccCCeEEEeccCCCCCceEEEEccCCc--eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee
Q 023822 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNK--YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 161 (276)
Q Consensus 84 ~~~~~~~l~~~~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 161 (276)
|+||+++|++++ ++.|++||+.+++ ....+..|...+..++|+|||++|+.++ ++.|++||+.+++.......
T Consensus 116 ~SpDg~~l~~~~----~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSPDAQRLLFPL----GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECTTSSEEEEEE----TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred ECCCCCEEEEEe----CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 999999999988 6899999999873 4455667888899999999999999887 56999999998876654422
Q ss_pred cC------------------CCeeEecCCCcEEEEee-CC---------------------------------eEEEEec
Q 023822 162 QG------------------RPAAAYDDQGLVFAVAF-GG---------------------------------YIRMFDA 189 (276)
Q Consensus 162 ~~------------------~~~~~~~~~~~~l~~~~-d~---------------------------------~i~~~d~ 189 (276)
.. +..++|+|+|+.|+.+. |+ .|++||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 21 46799999998777765 44 7889998
Q ss_pred cc-CCCCCeeeeeecCCCCCceEEEECCCCcEEEEeec-----CCcEEEEECCCCcEEEEeecCCCCCC---ceEEEEEC
Q 023822 190 RK-YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM-----EGHIHVLDSFRGTLLSTYNVKPVSRN---STLEASFS 260 (276)
Q Consensus 190 ~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~---~v~~~~~s 260 (276)
.+ ++.. .+.....+...+..++| |||++|++++. +..|++||+.+++....+..+ ... .+..++|+
T Consensus 271 ~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 271 AEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHET--SPTWVPLHNSLRFL 345 (741)
T ss_dssp STTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEE--CSSCCCCCSCCEEC
T ss_pred CCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcC--CCCcCCcCCceEEC
Confidence 77 5531 11111145667899999 99999987654 567999999999887776532 112 45688999
Q ss_pred CCCcEEEEecCCCCC
Q 023822 261 PEGMFVISGRVSPFS 275 (276)
Q Consensus 261 ~~g~~l~~~~~dg~v 275 (276)
|||+++++++.||++
T Consensus 346 pdg~~~~~~~~~g~~ 360 (741)
T 2ecf_A 346 DDGSILWSSERTGFQ 360 (741)
T ss_dssp TTSCEEEEECTTSSC
T ss_pred CCCeEEEEecCCCcc
Confidence 999999999888853
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=7.7e-26 Score=189.26 Aligned_cols=238 Identities=12% Similarity=0.097 Sum_probs=183.1
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEc--cCCeeeeeeeeeeeceEEEEEec----cCCeEEEecc
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDV--TAATCLKTINSKKYGVDLVCFTS----HPTTVIYSSK 96 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~ 96 (276)
+.+...++..+.. +.+++|+|+|++|++++.|+.|++||+ .+++.+.++.. ...+..++|+| ++++++++..
T Consensus 168 t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 168 SKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp TCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred CceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEc
Confidence 3455566663333 889999999999999999999999999 88888888874 44679999999 9999999875
Q ss_pred CCCCCceEEEEccCCceeeeecc----------cCc-ceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeee--eE-ee
Q 023822 97 NGWDESLRLLSLHDNKYLRYFKG----------HHD-RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQG--LL-RV 161 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~--~~-~~ 161 (276)
. ++.|.+||..+++++..+.. |.. .+..+.++|++. ++++...++.|.+||+.+.+... .+ ..
T Consensus 246 ~--~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~ 323 (543)
T 1nir_A 246 W--PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA 323 (543)
T ss_dssp E--SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECC
T ss_pred c--CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccC
Confidence 2 89999999999998887764 223 688999999776 56677778999999998765443 33 23
Q ss_pred cCCCeeEecCCCcEEEEee--CCeEEEEecccCCCCCeeeeeec--CCCCCceEEEECCC-CcEEEEee-cCCcEEEEEC
Q 023822 162 QGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVG--GDISDANVVKFSND-GRLMLLTT-MEGHIHVLDS 235 (276)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~-~dg~i~i~d~ 235 (276)
.....+.|+|++++++++. +++|.+||..+++. ....... .|......+ ++|+ |.+++++. .|++|.+||+
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred cCccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence 4466899999998765544 79999999998653 1112211 133323333 4677 66666665 5899999999
Q ss_pred CC-------CcEEEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 236 FR-------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 236 ~~-------~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
.+ .++++++. .+...+..++|+|+|++|++++
T Consensus 401 ~~~~~~~~~~~~v~~l~---~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQ---GQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp CTTTCTTTBTSEEEEEE---CSCSCCCCEECCTTCCEEEECC
T ss_pred CCCCCchhcCeEEEEEE---cCCCCceEEEcCCCCCcEEEec
Confidence 98 89999998 6777888899999999999987
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=7.2e-26 Score=179.16 Aligned_cols=235 Identities=10% Similarity=0.102 Sum_probs=167.1
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecC-CeEEEEEcc--CCe--eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDD-ESIRLYDVT--AAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
.|...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+. .+..++|+|+++++++++.. ++.|.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~--~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYN--AGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETT--TTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecC--CCeEEEE
Confidence 467789999999999999888876 999999997 444 334444433 78899999999988777642 7889999
Q ss_pred Ecc---CCceeeeecccCcceEEEEeccCCCEEEEee-CCCeEEEEeccC-ceeee----eEe---ecCCCeeEecCCCc
Q 023822 107 SLH---DNKYLRYFKGHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRA-EKCQG----LLR---VQGRPAAAYDDQGL 174 (276)
Q Consensus 107 d~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~~~----~~~---~~~~~~~~~~~~~~ 174 (276)
|+. ..+....+.. ...+.+++|+|+++++++++ .++.|.+||+.+ ++... ... ...+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 3344445543 34588999999999888777 899999999987 54332 221 12445799999998
Q ss_pred EEEEee--CCeEEEEecccCCCCC--eeeee-ecCC---CCCceEEEECCCCcEEEEe-ecCCcEEEEECC--CC--cEE
Q 023822 175 VFAVAF--GGYIRMFDARKYEKGP--FDIFS-VGGD---ISDANVVKFSNDGRLMLLT-TMEGHIHVLDSF--RG--TLL 241 (276)
Q Consensus 175 ~l~~~~--d~~i~~~d~~~~~~~~--~~~~~-~~~~---~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~--~~--~~~ 241 (276)
+++++. ++.|.+||+....... ..... .... ...+..++|+|+|++|+++ ..++.|.+||+. ++ +.+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 665443 7999999996422111 11111 1111 2345689999999888754 478999999998 33 344
Q ss_pred EEeecCCCCCCceEEEEECCCCcEEEEec-CCCC
Q 023822 242 STYNVKPVSRNSTLEASFSPEGMFVISGR-VSPF 274 (276)
Q Consensus 242 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~ 274 (276)
..+. .+ ..+..++|+|+|++|++++ .++.
T Consensus 271 ~~~~---~~-~~~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 271 GFQP---TE-TQPRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp EEEE---CS-SSCCCEEECTTSSEEEEECTTTCE
T ss_pred eeec---CC-CccceEEECCCCCEEEEecCCCCe
Confidence 4444 23 3388999999999888877 4554
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=2.2e-25 Score=177.20 Aligned_cols=228 Identities=11% Similarity=0.068 Sum_probs=179.9
Q ss_pred CcEEEEEEcCCCCEEEE-eecCCeEEEEEccCCeeeeeeeeeee---------ceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 35 GRISSMDFHKSSSYLVT-ASDDESIRLYDVTAATCLKTINSKKY---------GVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
..+..++|+|++++++. ...++.|.+||..+++.+..+..+.. .+..++|+|+++.++++... .++.|.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-KESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-SSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-CCceEE
Confidence 44778999999996554 45579999999999998887765432 26889999999988887631 178899
Q ss_pred EEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec------CCCeeEecCCCcEEEE
Q 023822 105 LLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ------GRPAAAYDDQGLVFAV 178 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~ 178 (276)
+||+.+++....+..+...+..++|+|+++++++++.++.|.+||+.+++....+... ....++++|+++.+++
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 9999999988888756666889999999999999999999999999999887776431 1335899999986665
Q ss_pred ee--CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 179 AF--GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 179 ~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
+. ++.|.+||..+++. ....... ....++|+|+|+++++++ .++.|.+||..+++.+..+. ....+.
T Consensus 248 ~~~~~~~v~~~d~~~~~~----~~~~~~~--~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~ 317 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRNGNI----LAKVAAP--ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD----TPTHPN 317 (353)
T ss_dssp EESSSSEEEEEETTTCCE----EEEEECS--SCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE----CCSEEE
T ss_pred EeCCCCEEEEEECCCCcE----EEEEEcC--CCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe----cCCCCC
Confidence 55 59999999987553 2222222 235699999999766655 68999999999999988887 345789
Q ss_pred EEEECCCCcEEEEecCCC
Q 023822 256 EASFSPEGMFVISGRVSP 273 (276)
Q Consensus 256 ~~~~s~~g~~l~~~~~dg 273 (276)
.++|+|||++|+++..++
T Consensus 318 ~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 318 SLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEECTTSCEEEEEEECC
T ss_pred eEEEcCCCCEEEEEEccc
Confidence 999999999887776653
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=1.3e-25 Score=178.28 Aligned_cols=235 Identities=11% Similarity=0.107 Sum_probs=163.6
Q ss_pred cCCCcEEEEEEcCCCCEEEEeec---CCeEEEEEccCCe--eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 32 DYNGRISSMDFHKSSSYLVTASD---DESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
.+...+..++|+|+|+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++++++++... ++.|.+|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVM 113 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEE
Confidence 3456678899999999 555554 6899999998765 344445566778999999999999888742 8999999
Q ss_pred EccC-Cc--eeeeecc---------cCcceEEEEeccCCCEEEEeeCCCeEEEEecc-Cceeeee--Ee---ecCCCeeE
Q 023822 107 SLHD-NK--YLRYFKG---------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR-AEKCQGL--LR---VQGRPAAA 168 (276)
Q Consensus 107 d~~~-~~--~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~--~~---~~~~~~~~ 168 (276)
++.. +. .+..+.. +...+.+++|+|+++++++...++.|.+||+. .++.... +. ......++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 22 2222221 12247889999999966666678899999998 4433221 11 12345789
Q ss_pred ecCCCcEEEEee--CCeEEEEecccCCCCCeeeeeecCCC------CCceEEEECCCCcEEEE-eecCCcEEEEECCCC-
Q 023822 169 YDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDI------SDANVVKFSNDGRLMLL-TTMEGHIHVLDSFRG- 238 (276)
Q Consensus 169 ~~~~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~- 238 (276)
|+|++++++++. ++.|.+|++................. ..+..++|+|+|++|++ ...++.|.+|++...
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g 273 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG 273 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence 999998665544 79999999875221111111221111 34788999999998755 456899999998732
Q ss_pred --cEEEEeecCCCCCCceEEEEECCCCcEEEEecCC
Q 023822 239 --TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 239 --~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
+.+..+. .+...+..++|+|||++|++++.+
T Consensus 274 ~~~~~~~~~---~~~~~~~~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 274 HLTLIQQIS---TEGDFPRDFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp CEEEEEEEE---CSSSCCCEEEECTTSSEEEEEETT
T ss_pred cEEEeEEEe---cCCCCcCeEEECCCCCEEEEEEcC
Confidence 3444444 345678899999999988887754
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=2.1e-25 Score=175.94 Aligned_cols=242 Identities=12% Similarity=0.101 Sum_probs=171.2
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeec-CCeEEEEEccCCee-eeeeeeeeeceEEEEEeccCCeEEEeccCCCC-C
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASD-DESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-E 101 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d-~ 101 (276)
+....+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+..+..+++|+|+++++++... + +
T Consensus 31 ~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~ 106 (331)
T 3u4y_A 31 EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTG---LNH 106 (331)
T ss_dssp CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCC---SSS
T ss_pred ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecC---CCC
Confidence 3444455556667 9999999997766665 88999999999887 6666666655555999999999995543 3 3
Q ss_pred --ceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEe-eCCCe-EEEEeccCceeee-----eE-eecCCCeeEecC
Q 023822 102 --SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISG-SLDRT-VLLWDQRAEKCQG-----LL-RVQGRPAAAYDD 171 (276)
Q Consensus 102 --~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~-i~iwd~~~~~~~~-----~~-~~~~~~~~~~~~ 171 (276)
.|.+||+.+++.+..+..+ ....+++|+|++++++++ ..++. |.+|++....... .+ .......++|+|
T Consensus 107 ~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 107 PFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred cccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 8999999999888777644 456899999999855554 55578 9999987543321 11 223456899999
Q ss_pred CCcEEEEee--CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcE--EEEeec
Q 023822 172 QGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTL--LSTYNV 246 (276)
Q Consensus 172 ~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~ 246 (276)
+++.++++. ++.|.+||+.+++.. .....+. ....+..++|+|+|++|++++ .++.|.+||+.+++. +..+..
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQNPENI-TLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCeEEEEECCCCccc-ceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 998554444 799999999875531 1122222 335678899999999776655 577899999999887 443331
Q ss_pred CC-CCCC---ceEEEEECCCCcEEEEecCCC
Q 023822 247 KP-VSRN---STLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 247 ~~-~~~~---~v~~~~~s~~g~~l~~~~~dg 273 (276)
.. .... ....++|+|||++|++++.++
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred ccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 10 0112 224589999999887665543
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4.8e-25 Score=173.84 Aligned_cols=224 Identities=12% Similarity=0.076 Sum_probs=167.7
Q ss_pred EEcCCCCE-EEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce-eeeec
Q 023822 41 DFHKSSSY-LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFK 118 (276)
Q Consensus 41 ~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~-~~~~~ 118 (276)
.|.+++++ +++++.++.|.+||+.+++....+..+...+ .++|+|+++++++++.. ++.|.+||+.+++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST--TCEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC--CCeEEEEECCCCceeEEecc
Confidence 45555554 6777889999999999999888877666666 99999999987777653 78999999999987 77777
Q ss_pred ccCcceEEEEeccCCCEEEEeeCCC---eEEEEeccCceeeeeEee-cCCCeeEecCCCcEE-EEee-CCe-EEEEeccc
Q 023822 119 GHHDRVVSLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLLRV-QGRPAAAYDDQGLVF-AVAF-GGY-IRMFDARK 191 (276)
Q Consensus 119 ~~~~~i~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~l-~~~~-d~~-i~~~d~~~ 191 (276)
.+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. .....++|+|+++.+ ++.. ++. |.+|++..
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 6666666599999999888655553 899999999988877743 345689999999744 4444 577 99999875
Q ss_pred CCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcE---EEEeecCCCCCCceEEEEECCCCcEEE
Q 023822 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTL---LSTYNVKPVSRNSTLEASFSPEGMFVI 267 (276)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~ 267 (276)
.................+..++|+|+|+++++++ .++.|++||+.+++. +..+. ....+..++|+|||++|+
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 161 DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG----TNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE----CSSCCCCEEECTTSSEEE
T ss_pred CCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc----CCCCCceEEECCCCCEEE
Confidence 3321000011113344578999999999665554 688999999999988 77666 346778899999999776
Q ss_pred EecC
Q 023822 268 SGRV 271 (276)
Q Consensus 268 ~~~~ 271 (276)
+++.
T Consensus 237 v~~~ 240 (331)
T 3u4y_A 237 VLTE 240 (331)
T ss_dssp EECS
T ss_pred EEEc
Confidence 6543
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=8.5e-25 Score=173.78 Aligned_cols=232 Identities=10% Similarity=0.076 Sum_probs=179.7
Q ss_pred CCcEEEEEEcCCCCEEEEeec-------CCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 34 NGRISSMDFHKSSSYLVTASD-------DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
...+..++|+|+++++++++. ++.|.+||..+++.+..+... ..+..++|+|++++++++... ++.|.+|
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~--~~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTV--NSAVTAI 116 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETT--TTEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecC--CCEEEEE
Confidence 456889999999998888773 568999999999988877653 357889999999977766542 7899999
Q ss_pred EccCCceeeeecccCc---------ceEEEEeccCCCEEEEee--CCCeEEEEeccCceeeeeEe--ecCCCeeEecCCC
Q 023822 107 SLHDNKYLRYFKGHHD---------RVVSLSLCSSKDCFISGS--LDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQG 173 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~ 173 (276)
|+.+++.+..+..+.. .+.+++|+|+++++++++ .++.|.+||+++++....+. ......++++|++
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 9999998877765432 268899999999777766 47899999999998888774 3347789999999
Q ss_pred cEEEEee-CCeEEEEecccCCCCCeeeeee--cCCCCCceEEEECCCCcEEEEeec-CCcEEEEECCCCcEEEEeecCCC
Q 023822 174 LVFAVAF-GGYIRMFDARKYEKGPFDIFSV--GGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPV 249 (276)
Q Consensus 174 ~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~ 249 (276)
+.++++. ++.|.+||..+++.. ..... ..+...+..++|+|+|+++++++. ++.|.+||..+++.+..+..
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--- 271 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKIL--SRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA--- 271 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEE--EEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC---
T ss_pred CEEEEEcCCCeEEEEECCCCeEE--EEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc---
Confidence 8777776 899999999875531 11111 123446778999999998777665 48999999999999888873
Q ss_pred CCCceEEEEECCCCcEEEEec-CCCCC
Q 023822 250 SRNSTLEASFSPEGMFVISGR-VSPFS 275 (276)
Q Consensus 250 ~~~~v~~~~~s~~g~~l~~~~-~dg~v 275 (276)
.. ...++|+|+|+++++++ .++.+
T Consensus 272 ~~--~~~~~~s~dg~~l~v~~~~~~~v 296 (353)
T 3vgz_A 272 PE--SLAVLFNPARNEAYVTHRQAGKV 296 (353)
T ss_dssp SS--CCCEEEETTTTEEEEEETTTTEE
T ss_pred CC--CceEEECCCCCEEEEEECCCCeE
Confidence 22 25689999999665554 45543
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=1.8e-25 Score=176.47 Aligned_cols=228 Identities=11% Similarity=-0.016 Sum_probs=176.3
Q ss_pred cEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeee-----eeceEEEEEeccCCeEEEeccC------C---CC
Q 023822 36 RISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSK-----KYGVDLVCFTSHPTTVIYSSKN------G---WD 100 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~------~---~d 100 (276)
.+..++|+|+++.++ ++..++.|.+||+.+++.+..+... ...+..++|+|++++++++... . .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 478899999998664 5556789999999999887766532 2367889999999999888510 0 16
Q ss_pred CceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecC-CCeeEecCCCcEEEEe
Q 023822 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFAVA 179 (276)
Q Consensus 101 ~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 179 (276)
+.|.+||+.+++....+.. ...+.+++|+|++++++++ ++.|.+||+.+++....+.... ...+.++|++..++..
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 9999999999888777664 4567889999999988887 6889999999998877664333 2355888988765544
Q ss_pred e--CC-----------------------eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEE
Q 023822 180 F--GG-----------------------YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 234 (276)
Q Consensus 180 ~--d~-----------------------~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 234 (276)
. ++ .|.+||+++++.. ......+...+..++|+|+|++++++ ++.|++||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d 266 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA---MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFD 266 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE---EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEE
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCce---EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEE
Confidence 3 22 4789999875532 33344455678889999999999888 78999999
Q ss_pred CCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 235 SFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+.+++.+..+. ....+.+++|+|+|++|++++.++.+
T Consensus 267 ~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~i 303 (337)
T 1pby_B 267 LEKNASIKRVP----LPHSYYSVNVSTDGSTVWLGGALGDL 303 (337)
T ss_dssp TTTTEEEEEEE----CSSCCCEEEECTTSCEEEEESBSSEE
T ss_pred CCCCcCcceec----CCCceeeEEECCCCCEEEEEcCCCcE
Confidence 99999888876 34567899999999999988877654
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=1.3e-24 Score=181.86 Aligned_cols=226 Identities=14% Similarity=0.153 Sum_probs=176.3
Q ss_pred EEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc--cCCceeeeec
Q 023822 41 DFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL--HDNKYLRYFK 118 (276)
Q Consensus 41 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~--~~~~~~~~~~ 118 (276)
+++|++.++++++.|++|.+||..+++++.++..+.. +..++|+|+++++++++. ++.|.+||+ .+++.+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEEEEEe
Confidence 4889999999999999999999999999988874433 889999999999999998 899999999 8888888887
Q ss_pred ccCcceEEEEecc----CCCEEEEeeC-CCeEEEEeccCceeeeeEeec-------------CCCeeEecCCCcEEEEee
Q 023822 119 GHHDRVVSLSLCS----SKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQ-------------GRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 119 ~~~~~i~~~~~~~----~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~ 180 (276)
+...+..++|+| +++++++++. +++|.+||..+.+++..+... .+..+.++|++..++++.
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 455679999999 9999988885 899999999999888877431 345788999776555544
Q ss_pred --CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCC-CCCCceEE
Q 023822 181 --GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKP-VSRNSTLE 256 (276)
Q Consensus 181 --d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~ 256 (276)
++.|.+||+.+.+.. ....+ .+...+..++|+|+|+++++++ .++.|.+||..+++++..+.... .|.+....
T Consensus 299 ~~~g~i~vvd~~~~~~l--~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNL--TVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp TTTTEEEEEECTTSSSC--EEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred CCCCeEEEEEecCCCcc--eeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 799999999875532 12222 2445688899999999877654 58899999999999998887311 14333333
Q ss_pred EEECCC-CcEEEEec-CCCCC
Q 023822 257 ASFSPE-GMFVISGR-VSPFS 275 (276)
Q Consensus 257 ~~~s~~-g~~l~~~~-~dg~v 275 (276)
+ ++|+ |.+++++. .|++|
T Consensus 376 ~-~~p~~g~~~~s~~~~d~~V 395 (543)
T 1nir_A 376 F-VHPKYGPVWSTSHLGDGSI 395 (543)
T ss_dssp E-EETTTEEEEEEEBSSSSEE
T ss_pred c-CCCCCccEEEeccCCCceE
Confidence 3 4677 66677765 46665
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=9.8e-25 Score=173.10 Aligned_cols=225 Identities=11% Similarity=0.038 Sum_probs=169.3
Q ss_pred EEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeee-eceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeee
Q 023822 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (276)
Q Consensus 39 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~ 117 (276)
.+++++++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|+++.++++... ++.|.+||+.+++....+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~--~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC--CCcEEEEeCCCCcEEEEE
Confidence 45678888899999999999999999999888776543 257889999999977665432 899999999999887766
Q ss_pred cccC------cceEEEEeccCCCEEEEeeCC------------CeEEEEeccCceeee---eE-eecCCCeeEecCCCcE
Q 023822 118 KGHH------DRVVSLSLCSSKDCFISGSLD------------RTVLLWDQRAEKCQG---LL-RVQGRPAAAYDDQGLV 175 (276)
Q Consensus 118 ~~~~------~~i~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~---~~-~~~~~~~~~~~~~~~~ 175 (276)
..+. ..+..++|+|+++++++++.+ +.|.+||+.+++... .+ ....+.+++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l 161 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 161 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCE
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcE
Confidence 5322 237889999999999988865 899999998854332 23 2334678889999995
Q ss_pred EEEeeCCeEEEEecccCCCCCeeeeeec----------------------------------------------------
Q 023822 176 FAVAFGGYIRMFDARKYEKGPFDIFSVG---------------------------------------------------- 203 (276)
Q Consensus 176 l~~~~d~~i~~~d~~~~~~~~~~~~~~~---------------------------------------------------- 203 (276)
++ + ++.|.+||..+++.. ......
T Consensus 162 ~~-~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 162 YV-A-GPDIYKMDVKTGKYT--VALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp EE-E-SSSEEEECTTTCCEE--EEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EE-c-cCcEEEEeCCCCcee--ccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 54 3 445999998775421 011000
Q ss_pred --------------CCCCCceEEEECC-CCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 204 --------------GDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 204 --------------~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
.....+..++|+| +|++++++ ++.|.+||+.+++.+..+. ....+.+++|+|+|++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN----LDHTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE----CSSCCCEEEECSSSSCEEE
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc----CCCCccceEECCCCCEEEE
Confidence 0112345678889 99998888 8899999999999888876 3345778999999998888
Q ss_pred ecCCCCC
Q 023822 269 GRVSPFS 275 (276)
Q Consensus 269 ~~~dg~v 275 (276)
++.++.+
T Consensus 312 ~~~~~~v 318 (349)
T 1jmx_B 312 GGTFNDL 318 (349)
T ss_dssp ESBSSEE
T ss_pred ecCCCeE
Confidence 8777653
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=2.4e-25 Score=188.55 Aligned_cols=230 Identities=11% Similarity=0.036 Sum_probs=168.2
Q ss_pred CCcEEEEEEcCCCCEEEEeec-CCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC--
Q 023822 34 NGRISSMDFHKSSSYLVTASD-DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-- 110 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~-- 110 (276)
..+|++++|+|||+.||+++. ||+++||++.+++..+....+...+..+.|+|+ +.++++...+.+....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 457999999999999999887 999999999776655444333368999999999 6565554312255566665543
Q ss_pred CceeeeecccCcceEEEEeccCCCE-EEEeeCCCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee-C----CeE
Q 023822 111 NKYLRYFKGHHDRVVSLSLCSSKDC-FISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-G----GYI 184 (276)
Q Consensus 111 ~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d----~~i 184 (276)
......+.... .+...+|+|+++. +++...++.+.+||+.+++......... ..++|+|+|+.++.+. + ..|
T Consensus 100 ~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 100 PGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp TTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEE
T ss_pred CCccccccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEE
Confidence 22222343222 3446688888863 3333444455699999987666554444 8899999999998665 4 689
Q ss_pred EEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC--cEEEEECCCCcEEEEeecCCCCCCceEEEE----
Q 023822 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEAS---- 258 (276)
Q Consensus 185 ~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~---- 258 (276)
++||+.+++. ..+..+...+..++|+|||+.|+++..++ .|++||+.+++.. .+. .+...+..++
T Consensus 178 ~~~d~~~g~~-----~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~---~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 178 FTSNLSSGGL-----RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE---LPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEETTTCCC-----EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC---CSCSHHHHHCCSEE
T ss_pred EEEcCCCCCc-----eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc---CCCcChhhhhhccc
Confidence 9999987653 24456777789999999999999888888 8999999998887 555 5666677777
Q ss_pred ----ECCCCcEEEEecCCCCC
Q 023822 259 ----FSPEGMFVISGRVSPFS 275 (276)
Q Consensus 259 ----~s~~g~~l~~~~~dg~v 275 (276)
|+|||.++++++.||.+
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEE
T ss_pred cceeEcCCCcEEEEEEcCCcE
Confidence 99999989999888753
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.1e-24 Score=168.52 Aligned_cols=211 Identities=11% Similarity=0.071 Sum_probs=161.0
Q ss_pred EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC-Cceeeeeccc-CcceEEEE
Q 023822 51 TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYLRYFKGH-HDRVVSLS 128 (276)
Q Consensus 51 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~-~~~~~~~~~~-~~~i~~~~ 128 (276)
.++.|+.|++||+.+++.. .+..|...+.+++|+|++++++++. ++.|++||+.+ ++.......+ ...+.+++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS----EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE----TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc----CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 4467899999999988765 4556788899999999999999986 88999999999 8777666555 36789999
Q ss_pred eccCCCEEEEeeC--CCe--EEEEeccCceeeeeEeecCCCeeEecCCCcEEE-Eee-CCeEEEEecccCCCCCeeeeee
Q 023822 129 LCSSKDCFISGSL--DRT--VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFA-VAF-GGYIRMFDARKYEKGPFDIFSV 202 (276)
Q Consensus 129 ~~~~~~~l~~~~~--d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-d~~i~~~d~~~~~~~~~~~~~~ 202 (276)
|+|++++|++++. ++. |..|++.+++.........+..++|+|+++.++ ++. ++.+++|++...... ...+
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~---~~~~ 168 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV---ETRL 168 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC---EEEC
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc---ceEc
Confidence 9999999999983 344 455555555433322334466789999998776 343 899999997543221 3444
Q ss_pred cCCCCCceEEEECCCCcEEEEee-cCCcEEEEECC-CCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCC
Q 023822 203 GGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
..+...+.+++|+|+|++|++++ .++.+++|++. .+..+..+. .+...+..++|+|+|++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT---DSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---CCSEEEEEEEECTTSSEEEEEEEE
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---cCCcccCCeEECCCCCEEEEEEcC
Confidence 55667899999999999888766 58899999876 555566665 567889999999999999888765
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=4.9e-26 Score=197.44 Aligned_cols=229 Identities=10% Similarity=0.063 Sum_probs=171.5
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeee---ceEEEEEeccCCeEEEeccCC------CCCceEEE
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKNG------WDESLRLL 106 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~~------~d~~i~~~ 106 (276)
.+.+++|+|||+++++ +.||+|++||+.+++....+..+.. .+..++|+||+++|+++.... .++.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678999999997776 7899999999999988777766654 489999999999999987521 13789999
Q ss_pred EccCCceeeee---cccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee--cCC-----------------
Q 023822 107 SLHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV--QGR----------------- 164 (276)
Q Consensus 107 d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~----------------- 164 (276)
|+.+++. ..+ ..|...+..++|+|||++|+.++. +.|++||+.+++....... ..+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9998875 333 334455889999999999999886 7999999998876655422 222
Q ss_pred -CeeEecCCCcEEEEee-CC----------------------------------eEEEEecccCCCCCeeeeeecC----
Q 023822 165 -PAAAYDDQGLVFAVAF-GG----------------------------------YIRMFDARKYEKGPFDIFSVGG---- 204 (276)
Q Consensus 165 -~~~~~~~~~~~l~~~~-d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~---- 204 (276)
..++|+|+|+.|+.+. ++ .|++||+.+++. ...+..
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~~ 250 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDDP 250 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCCG
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCccC
Confidence 5799999999887765 32 789999887653 122222
Q ss_pred --CCCCceEEEECCCCcEEEEeec----CCcEEEEECCCCcEEEEeecCCCCCCce----EEEEECCCCcEEEEe--cCC
Q 023822 205 --DISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTLLSTYNVKPVSRNST----LEASFSPEGMFVISG--RVS 272 (276)
Q Consensus 205 --~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~v----~~~~~s~~g~~l~~~--~~d 272 (276)
+...+..++|+|||++|++.+. +..|++||+.+++....+.. .+...+ ..++|+|||+.|+.. ..+
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 328 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHED--ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ 328 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEE--ECSSCCCCCCCCCEECTTSCSEEEEEEECC
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEe--ccCCEEeccCCCceEcCCCCeEEEEEeccc
Confidence 2456889999999998877653 35799999999987766542 123333 378999999977753 344
Q ss_pred C
Q 023822 273 P 273 (276)
Q Consensus 273 g 273 (276)
+
T Consensus 329 ~ 329 (723)
T 1xfd_A 329 G 329 (723)
T ss_dssp S
T ss_pred C
Confidence 4
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=2.6e-24 Score=186.16 Aligned_cols=235 Identities=11% Similarity=0.127 Sum_probs=172.9
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccC-----Ceeeeeeeeeeec--------------eEEEEEeccCC
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-----ATCLKTINSKKYG--------------VDLVCFTSHPT 89 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~ 89 (276)
.+..+...+.+++|+|||+.|+++ .|+.|++||+.+ ++.......+... +..+.|+||++
T Consensus 115 ~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 345567788999999999999985 689999999998 7766544443332 48999999999
Q ss_pred eEEEeccC------------------------------CCCCceEEEEccCCceeeeec--ccCcceEEEEeccCCCEEE
Q 023822 90 TVIYSSKN------------------------------GWDESLRLLSLHDNKYLRYFK--GHHDRVVSLSLCSSKDCFI 137 (276)
Q Consensus 90 ~l~~~~~~------------------------------~~d~~i~~~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~ 137 (276)
+|++++.+ ..+..|++||+.+++...... .|...+.+++|+||+++|+
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 99998620 015789999999887654432 4667899999999999999
Q ss_pred EeeCCC-----eEEEEeccCc-eeeeeEee-c-----CCCeeEecC--CCcEEEEee-CCeEEEEecccCCCCCeeeeee
Q 023822 138 SGSLDR-----TVLLWDQRAE-KCQGLLRV-Q-----GRPAAAYDD--QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSV 202 (276)
Q Consensus 138 ~~~~d~-----~i~iwd~~~~-~~~~~~~~-~-----~~~~~~~~~--~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~ 202 (276)
+++.++ .|++||+.++ ........ . .+..+.|+| ++++++++. ++.+++|++..... ....+
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~---~~~~l 350 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR---LIRQV 350 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC---EEEEC
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC---EEEec
Confidence 887775 8999999988 43333321 1 135689999 999888777 78888888762111 13344
Q ss_pred cCCCCCceE-EEECCCCcEEEEeec-CC----cEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCC
Q 023822 203 GGDISDANV-VKFSNDGRLMLLTTM-EG----HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 203 ~~~~~~i~~-~~~~~~~~~l~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
..+...+.. ++|+|+|+.|++++. ++ .|..||+.+++ ...+. +...+.+++|+|||++|+....+
T Consensus 351 ~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~----~~~~~~~~~~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 351 TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT----PESGMHRTQLSPDGSAIIDIFQS 421 (706)
T ss_dssp CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC----CSSSEEEEEECTTSSEEEEEEEC
T ss_pred CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc----CCCceEEEEECCCCCEEEEEecC
Confidence 556666776 799999988766554 44 67777877765 33443 55678999999999988876544
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=1e-24 Score=177.86 Aligned_cols=234 Identities=8% Similarity=0.089 Sum_probs=163.6
Q ss_pred CCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe----------eeee-----eeeeeeceEEEEEeccCCeEE----E
Q 023822 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT----------CLKT-----INSKKYGVDLVCFTSHPTTVI----Y 93 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----------~~~~-----~~~~~~~v~~~~~~~~~~~l~----~ 93 (276)
+...++.+++++++.++++++.|+ +++|+..... .... ...+...|.+++|+|++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344689999999999999999887 8998764211 0110 112345799999999999999 5
Q ss_pred eccCCCCCceEEEEccCC--------ce---eeeecccCcceEEEEeccC-CCEEEEeeCCCeEEEEeccCceeeeeE--
Q 023822 94 SSKNGWDESLRLLSLHDN--------KY---LRYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLL-- 159 (276)
Q Consensus 94 ~~~~~~d~~i~~~d~~~~--------~~---~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~-- 159 (276)
++. |+.|++||+.++ ++ ...+.+|...|.+++|+|+ +++|++++.||+|++||++++......
T Consensus 114 gs~---d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 114 SEY---GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp TTT---EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred cCC---CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 555 999999998765 22 3456679999999999998 789999999999999999988665444
Q ss_pred eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeec-----CCCCCceEEEECCCCcEEEEe-ecCC----
Q 023822 160 RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLT-TMEG---- 228 (276)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~-~~dg---- 228 (276)
+...+.+++|+|++++|++++ |+.|++||++ ++. ....... .|...+.+++|++++.++++. +.+|
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~--~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE--KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE--EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc--cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 345788999999998888887 8999999998 221 1111111 123478999999998877553 3443
Q ss_pred --cEEEEECCCCc-----EEEEeecC----CCCCCceEEEEECCCCcEEEEecCCC
Q 023822 229 --HIHVLDSFRGT-----LLSTYNVK----PVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 229 --~i~i~d~~~~~-----~~~~~~~~----~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.+++|++...+ ....+... .+...+-..+.+.++.+++++++...
T Consensus 268 ~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s 323 (434)
T 2oit_A 268 SPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAS 323 (434)
T ss_dssp CCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTC
T ss_pred CCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCC
Confidence 38999997652 11221110 01222333344447777777766543
No 146
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=6.5e-25 Score=190.89 Aligned_cols=224 Identities=8% Similarity=0.071 Sum_probs=168.8
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCe--eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~ 113 (276)
.|.+++|+|||++|++++. +.|++||+.+++ ....+..+...+..++|+|++++|+++. ++.|++||+.+++.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCE
Confidence 4889999999999999886 899999998873 4455666777899999999999999987 67999999998876
Q ss_pred eeeecccCcc----------------eEEEEeccCCCEEEEeeCCC---------------------------------e
Q 023822 114 LRYFKGHHDR----------------VVSLSLCSSKDCFISGSLDR---------------------------------T 144 (276)
Q Consensus 114 ~~~~~~~~~~----------------i~~~~~~~~~~~l~~~~~d~---------------------------------~ 144 (276)
......+... +..++|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 6554433332 47899999999999988765 8
Q ss_pred EEEEeccC-ceeeeeE----eecCCCeeEecCCCcEEEEee------CCeEEEEecccCCCCCeeeeeecCCC-C---Cc
Q 023822 145 VLLWDQRA-EKCQGLL----RVQGRPAAAYDDQGLVFAVAF------GGYIRMFDARKYEKGPFDIFSVGGDI-S---DA 209 (276)
Q Consensus 145 i~iwd~~~-~~~~~~~----~~~~~~~~~~~~~~~~l~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~-~---~i 209 (276)
|++||+.+ ++..... +...+..++| |+++.|+... +..|++||+.+++.. .....+. . .+
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~----~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR----VLAHETSPTWVPLH 339 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE----EEEEEECSSCCCCC
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE----EEEEcCCCCcCCcC
Confidence 89999988 7654433 1233568899 9998877654 367999999876531 1111121 1 45
Q ss_pred eEEEECCCCcEEEEeecCCcEEEEECC-CCcEEEEeecCCCCCCceEEE-EECCCCcEEEE-ecCCC
Q 023822 210 NVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVIS-GRVSP 273 (276)
Q Consensus 210 ~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~-~~~dg 273 (276)
..++|+|+|+++++++.||.++||.+. +++ ...+. .+...+..+ .|+|+|+.|+. ++.++
T Consensus 340 ~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~---~~~~~v~~~~~~s~dg~~l~~~~~~~~ 402 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT---HGNWSVDELLAVDEKAGLAYFRAGIES 402 (741)
T ss_dssp SCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC---CSSSCEEEEEEEETTTTEEEEEECSSC
T ss_pred CceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee---ecceEEEeEeEEeCCCCEEEEEEeCCC
Confidence 689999999988999999988888765 445 56665 466778887 59999987754 44443
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=1.5e-24 Score=187.61 Aligned_cols=226 Identities=12% Similarity=0.059 Sum_probs=169.1
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC----
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD---- 110 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~---- 110 (276)
..|.+++|+|| +.++.+ .++.+++||+.+++... +..+...+..++|+|+++.++++. ++.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~~----~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYVR----NHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEEE----TTEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEEE----CCeEEEEecCccccc
Confidence 56999999999 666655 45999999998887644 344556788999999999999964 89999999998
Q ss_pred -CceeeeecccCcc--------------eEEEEeccCCCEEEEee---------------------------------CC
Q 023822 111 -NKYLRYFKGHHDR--------------VVSLSLCSSKDCFISGS---------------------------------LD 142 (276)
Q Consensus 111 -~~~~~~~~~~~~~--------------i~~~~~~~~~~~l~~~~---------------------------------~d 142 (276)
++.......+... +.+++|+|||++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 7766544433332 48899999999999987 44
Q ss_pred CeEEEEeccCceeeeeEee----cCCCeeEecCCCcEEEEee-CC-----eEEEEecccCCCCCeeeeeecCCC---CCc
Q 023822 143 RTVLLWDQRAEKCQGLLRV----QGRPAAAYDDQGLVFAVAF-GG-----YIRMFDARKYEKGPFDIFSVGGDI---SDA 209 (276)
Q Consensus 143 ~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~-d~-----~i~~~d~~~~~~~~~~~~~~~~~~---~~i 209 (276)
..|++||+.+++....... ..+..++|+|+++.++.+. ++ .|++||+.+++. ........+. ..+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~--~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF--VRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE--EEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce--eeEEEEccCCCeECcc
Confidence 6799999998876544321 2355899999999777655 54 899999987621 1111111122 234
Q ss_pred eEEEECC--CCcEEEEeecCCcEEEEECC-CCcEEEEeecCCCCCCceEE-EEECCCCcEEEEecCC
Q 023822 210 NVVKFSN--DGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGRVS 272 (276)
Q Consensus 210 ~~~~~~~--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~d 272 (276)
..++|+| +|+++++++.|+.++||++. +++.+..+. .+...+.. ++|+|+|+.|+.++.+
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~---~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT---KGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC---CSSSCEEEEEEECTTSSEEEEEESS
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC---CCCeEEEeeeEEcCCCCEEEEEecC
Confidence 6789999 99999999999999999876 667777776 46667776 7999999887665544
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=3.2e-23 Score=165.47 Aligned_cols=231 Identities=8% Similarity=0.087 Sum_probs=159.4
Q ss_pred CCCcEEEEEEcCCCCEEEEeecC----CeEEEEEccC--Cee--eeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 33 YNGRISSMDFHKSSSYLVTASDD----ESIRLYDVTA--ATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
+...+..++|+|++++|++++.+ +.|.+|++.. ++. +.....+......+++ ++++++++... ++.|.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~--~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYS--GGSIT 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETT--TTEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECC--CCEEE
Confidence 66778889999999999998876 7999999875 443 2333333445667777 88888877642 88999
Q ss_pred EEEccCCceeeeec--------------ccCcceEEEEeccCCCEEEEee-CCCeEEEEeccCcee------e------e
Q 023822 105 LLSLHDNKYLRYFK--------------GHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEKC------Q------G 157 (276)
Q Consensus 105 ~~d~~~~~~~~~~~--------------~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~------~------~ 157 (276)
+|++.....+..+. .+...+.+++|+|+++++++++ .++.|.+|++..... + .
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~ 203 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE 203 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE
T ss_pred EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc
Confidence 99997543322111 1123457899999999666555 488999999875431 1 1
Q ss_pred eE---eecCCCeeEecCCCcEEEEee--CCeEEEEecccCCCCCeeee-eecCCCCCceEEEECCCCcEEEEeecC--Cc
Q 023822 158 LL---RVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIF-SVGGDISDANVVKFSNDGRLMLLTTME--GH 229 (276)
Q Consensus 158 ~~---~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~ 229 (276)
.. .......++|+|++++++++. ++.|.+||+.++........ ....+...+..++|+|+|++|+++..+ +.
T Consensus 204 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 204 AFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred ceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 11 223355899999998766655 79999999985432111111 122233456799999999998776654 89
Q ss_pred EEEEECC--CCc--EEEEeecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 230 IHVLDSF--RGT--LLSTYNVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 230 i~i~d~~--~~~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
|.+|++. +++ .+..+. . ...+..++|+|||++|++++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~---~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQL---T-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEE---C-SSCCCEEEECTTSCEEEEEET
T ss_pred EEEEEEcCCCCcEEEeeEec---C-CCCCceEEECCCCCEEEEEEC
Confidence 9999985 455 333343 2 457789999999999888874
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=4.3e-24 Score=191.95 Aligned_cols=229 Identities=13% Similarity=0.096 Sum_probs=180.9
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee-----------eeeceEEEEEe-ccCCeEEEecc
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-----------KKYGVDLVCFT-SHPTTVIYSSK 96 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~ 96 (276)
.+..|. .+..++|+|+|+.|+.+ .++.|++|++...+ +..+.. +...+..++|+ |+++.++++.
T Consensus 240 ~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 240 KHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp ECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred EecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 344444 46678999999999887 58999999985443 334443 34468999999 9999999987
Q ss_pred CCCCCceEEEEccCCceeeeecccCc-ceEEEEeccCCCEEEEeeCCCeEE-EEeccCceeeeeE-eecCCCeeEecCCC
Q 023822 97 NGWDESLRLLSLHDNKYLRYFKGHHD-RVVSLSLCSSKDCFISGSLDRTVL-LWDQRAEKCQGLL-RVQGRPAAAYDDQG 173 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~~i~-iwd~~~~~~~~~~-~~~~~~~~~~~~~~ 173 (276)
++.|.+|++.+++.. .+..|.. .+..++|+ +++.|++++.++.+. +||+..++..... +...+..++|+|++
T Consensus 316 ---~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG 390 (1045)
T 1k32_A 316 ---RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNG 390 (1045)
T ss_dssp ---TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTS
T ss_pred ---cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCC
Confidence 789999999877654 3566777 89999999 999999999888898 9999877654333 22345689999999
Q ss_pred cEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC----------cEEEEECCCCcEEE
Q 023822 174 LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG----------HIHVLDSFRGTLLS 242 (276)
Q Consensus 174 ~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----------~i~i~d~~~~~~~~ 242 (276)
+.++.+. ++.|++||+.+++. ......|...+..++|+|||++|++++.++ .|++||+.+++ +.
T Consensus 391 ~~la~~~~~~~v~~~d~~tg~~----~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~ 465 (1045)
T 1k32_A 391 KFAVVANDRFEIMTVDLETGKP----TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IF 465 (1045)
T ss_dssp SEEEEEETTSEEEEEETTTCCE----EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EE
T ss_pred CEEEEECCCCeEEEEECCCCce----EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EE
Confidence 9888777 78999999987653 333346777889999999999999887654 89999999887 45
Q ss_pred EeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 243 TYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 243 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.+. .+...+..++|+|||++|++++.++.
T Consensus 466 ~l~---~~~~~~~~~~~spdG~~l~~~s~~~~ 494 (1045)
T 1k32_A 466 AAT---TENSHDYAPAFDADSKNLYYLSYRSL 494 (1045)
T ss_dssp ECS---CSSSBEEEEEECTTSCEEEEEESCCC
T ss_pred Eee---CCCcccCCceEcCCCCEEEEEecccC
Confidence 555 47778899999999999999887654
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.1e-24 Score=186.18 Aligned_cols=237 Identities=8% Similarity=0.055 Sum_probs=167.1
Q ss_pred ccceeeccCCC---cEEEEEEcCCCCEEEEeecC---------CeEEEEEccCCeeeeeee---eeeeceEEEEEeccCC
Q 023822 25 EVGMSFRDYNG---RISSMDFHKSSSYLVTASDD---------ESIRLYDVTAATCLKTIN---SKKYGVDLVCFTSHPT 89 (276)
Q Consensus 25 ~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~ 89 (276)
+....+.+|.. .|.+++|||||++|++++.+ +.+++||+.+++. ..+. .+...+..++|+|+++
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~ 126 (723)
T 1xfd_A 48 TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ 126 (723)
T ss_dssp CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT
T ss_pred cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC
Confidence 33445556654 49999999999999998764 7888999998875 3332 3444588999999999
Q ss_pred eEEEeccCCCCCceEEEEccCCceeeeecccCcce------------------EEEEeccCCCEEEEeeCCC--------
Q 023822 90 TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV------------------VSLSLCSSKDCFISGSLDR-------- 143 (276)
Q Consensus 90 ~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i------------------~~~~~~~~~~~l~~~~~d~-------- 143 (276)
.|++++ ++.|++||+.+++.......+...+ .+++|+|||++|++++.|+
T Consensus 127 ~la~~~----~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~ 202 (723)
T 1xfd_A 127 QLIFIF----ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (723)
T ss_dssp CEEEEE----TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred EEEEEE----CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEe
Confidence 999988 6799999999888766555444333 7899999999999887553
Q ss_pred --------------------------eEEEEeccCceeeeeEe--------ecCCCeeEecCCCcEEEEee-----CCeE
Q 023822 144 --------------------------TVLLWDQRAEKCQGLLR--------VQGRPAAAYDDQGLVFAVAF-----GGYI 184 (276)
Q Consensus 144 --------------------------~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~-----d~~i 184 (276)
.|++||+.+++....+. ...+..++|+|+|++++... +..|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i 282 (723)
T 1xfd_A 203 PTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSIL 282 (723)
T ss_dssp CCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEE
T ss_pred eccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEE
Confidence 79999999887544442 22345799999999886654 2579
Q ss_pred EEEecccCCCCCeeeeeecCCCCCc----eEEEECCCCcEEEEe--ecCC------cEEEEE-CCCCcE--EEEeecCCC
Q 023822 185 RMFDARKYEKGPFDIFSVGGDISDA----NVVKFSNDGRLMLLT--TMEG------HIHVLD-SFRGTL--LSTYNVKPV 249 (276)
Q Consensus 185 ~~~d~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~l~~~--~~dg------~i~i~d-~~~~~~--~~~~~~~~~ 249 (276)
++||+.+++.. .... ..+...+ ..++|+|||+.|+.. ..++ .|.+|| ..+++. ...+. .
T Consensus 283 ~~~d~~~g~~~--~~~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~---~ 356 (723)
T 1xfd_A 283 TLCDATTGVCT--KKHE-DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT---S 356 (723)
T ss_dssp EEEETTTCCEE--EEEE-EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC---C
T ss_pred EEEeCCCCcce--EEEE-eccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee---c
Confidence 99999876531 1111 1222333 378999999977654 4566 577777 344441 44444 2
Q ss_pred CCCceEE-EEECCCCcEEEEecCC
Q 023822 250 SRNSTLE-ASFSPEGMFVISGRVS 272 (276)
Q Consensus 250 ~~~~v~~-~~~s~~g~~l~~~~~d 272 (276)
....+.. ++|+|||++|+..+.+
T Consensus 357 ~~~~~~~~~~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 357 GDWDVTKILAYDEKGNKIYFLSTE 380 (723)
T ss_dssp SSSCEEEEEEEETTTTEEEEEESS
T ss_pred CCeEEEeeeEEcCCCCEEEEEEcC
Confidence 3344444 6999999998766554
No 151
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.8e-22 Score=159.54 Aligned_cols=229 Identities=9% Similarity=0.101 Sum_probs=155.9
Q ss_pred cceeeccCCCcEEEEEEcCCCCEEEEeec-CCeEEEEEcc---CCeeeeeeeeeeeceEEEEEeccCCeEEEec-cCCCC
Q 023822 26 VGMSFRDYNGRISSMDFHKSSSYLVTASD-DESIRLYDVT---AATCLKTINSKKYGVDLVCFTSHPTTVIYSS-KNGWD 100 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~d 100 (276)
....+..+. .+..++|+|++++|++++. ++.|.+||+. ..+....+..+ ..+.+++|+|++++++++. . +
T Consensus 76 ~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~---~ 150 (343)
T 1ri6_A 76 FAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALK---Q 150 (343)
T ss_dssp EEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGG---G
T ss_pred eccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCC---C
Confidence 334444443 7889999999998876664 8899999994 34444444433 3588999999999888877 5 8
Q ss_pred CceEEEEccC-Cceee----eecc-cCcceEEEEeccCCCEEEEee-CCCeEEEEeccC--cee--eeeEeec-------
Q 023822 101 ESLRLLSLHD-NKYLR----YFKG-HHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRA--EKC--QGLLRVQ------- 162 (276)
Q Consensus 101 ~~i~~~d~~~-~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~--~~~--~~~~~~~------- 162 (276)
+.|.+||+.+ ++... .+.. ....+..++|+|+++++++++ .++.|.+||++. ++. .......
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 230 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT 230 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc
Confidence 9999999987 54432 2222 334688899999999765554 789999999954 322 2222111
Q ss_pred -CCCeeEecCCCcEEEEee--CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEE--ECC
Q 023822 163 -GRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVL--DSF 236 (276)
Q Consensus 163 -~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~--d~~ 236 (276)
.+..++|+|+++.++++. ++.|.+||+...............+. .+..++|+|+|++|++++ .++.|.+| |..
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 122599999997766444 79999999984221112222333333 388999999999888887 67999999 444
Q ss_pred CCcE--EEEeecCCCCCCceEEEEECCCCc
Q 023822 237 RGTL--LSTYNVKPVSRNSTLEASFSPEGM 264 (276)
Q Consensus 237 ~~~~--~~~~~~~~~~~~~v~~~~~s~~g~ 264 (276)
+++. +..+. ......+++|.|+.+
T Consensus 310 ~g~~~~~~~~~----~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 310 QGLLHEKGRYA----VGQGPMWVVVNAHEG 335 (343)
T ss_dssp TTEEEEEEEEE----CSSSCCEEEEEEEC-
T ss_pred CceeeEccccc----cCCCCeeEEEEcccC
Confidence 6644 33343 234567788887654
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.92 E-value=4.9e-23 Score=164.66 Aligned_cols=239 Identities=9% Similarity=0.035 Sum_probs=163.2
Q ss_pred CCCcEEEEEEcCCCCEEEEeecCCeEEEEEcc-CCeeeeeeeee-eeceEEEEEeccCCe--EEEec-------------
Q 023822 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVT-AATCLKTINSK-KYGVDLVCFTSHPTT--VIYSS------------- 95 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~------------- 95 (276)
+...+..++|+|++++|++++.+ .|.+|++. +++........ .+.+..++|+|++++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 34568899999999999999888 99999997 77765433211 123566899999995 34442
Q ss_pred cCCCCCceEEEEcc-CCceeeeec----ccCcceEEEEeccCCCEEEEeeC-CCeEEEEecc-Cceeee--eEe----ec
Q 023822 96 KNGWDESLRLLSLH-DNKYLRYFK----GHHDRVVSLSLCSSKDCFISGSL-DRTVLLWDQR-AEKCQG--LLR----VQ 162 (276)
Q Consensus 96 ~~~~d~~i~~~d~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~-~~~~~~--~~~----~~ 162 (276)
. ++.+.+|++. .++....+. .+...+.+++|+|+|++++++.. ++.|++||+. +++... .+. ..
T Consensus 117 ~---~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 117 F---AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp S---CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred C---CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 3 8899999997 455544333 24567899999999998887664 6799999998 665432 222 23
Q ss_pred CCCeeEecCCCcEEEEee--CCeEEEEeccc--CCCCC-ee-eeeecC----CCC------CceEEE-ECCCCcEEEEee
Q 023822 163 GRPAAAYDDQGLVFAVAF--GGYIRMFDARK--YEKGP-FD-IFSVGG----DIS------DANVVK-FSNDGRLMLLTT 225 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~--~~~~~-~~-~~~~~~----~~~------~i~~~~-~~~~~~~l~~~~ 225 (276)
.+..++|+|++++++++. ++.|.+|++.. ++... .. +..+.. +.. .+..++ |+|+|++|++++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 456899999998877665 68999998753 22100 00 111211 121 478899 999999988776
Q ss_pred cC-C-----cEEEEECC-CCcEEEEeecCCCCCCceEEEEECC---CCcEEEEecCC-CCC
Q 023822 226 ME-G-----HIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSP---EGMFVISGRVS-PFS 275 (276)
Q Consensus 226 ~d-g-----~i~i~d~~-~~~~~~~~~~~~~~~~~v~~~~~s~---~g~~l~~~~~d-g~v 275 (276)
.+ + .|.+|++. +++..........+...+..++|+| ||++|++++.+ +.|
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred CCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 43 2 89999986 6665432110002344566789999 89999998865 543
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=2.1e-23 Score=170.11 Aligned_cols=200 Identities=13% Similarity=0.072 Sum_probs=147.9
Q ss_pred cCCCcEEEEEEcCCCCEEE----EeecCCeEEEEEccCC--------ee---eeeeeeeeeceEEEEEecc-CCeEEEec
Q 023822 32 DYNGRISSMDFHKSSSYLV----TASDDESIRLYDVTAA--------TC---LKTINSKKYGVDLVCFTSH-PTTVIYSS 95 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~----~~~~d~~i~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 95 (276)
.|...|.+++|+|++++|+ +++.|+.|+|||+.++ +. ...+.+|...|.+++|+|+ +..+++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 3567899999999999999 7889999999998765 22 3455668899999999998 78899898
Q ss_pred cCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee---------cCCCe
Q 023822 96 KNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------QGRPA 166 (276)
Q Consensus 96 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------~~~~~ 166 (276)
. |+.|++||++++.......+|...|.+++|+|++++|++|+.||+|++||++ ++....+.. ..+.+
T Consensus 170 ~---Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 170 A---DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp T---TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEE
T ss_pred C---CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEE
Confidence 8 9999999999987776677789999999999999999999999999999998 444443311 14568
Q ss_pred eEecCCCcEEEEee--CC------eEEEEecccCCCC-Ceeeeeec-------CCCCCceEEEECCCCcEEEEeec-CCc
Q 023822 167 AAYDDQGLVFAVAF--GG------YIRMFDARKYEKG-PFDIFSVG-------GDISDANVVKFSNDGRLMLLTTM-EGH 229 (276)
Q Consensus 167 ~~~~~~~~~l~~~~--d~------~i~~~d~~~~~~~-~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~-dg~ 229 (276)
+.|++++.++++.. +| .+++|+++..+.. +.....+. ....+...+.+-++.+++++++. .+.
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~d 325 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTE 325 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSB
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCc
Confidence 89999988886655 33 3899999875422 11111111 22223333444477777666553 455
Q ss_pred EEEEEC
Q 023822 230 IHVLDS 235 (276)
Q Consensus 230 i~i~d~ 235 (276)
|.++..
T Consensus 326 v~vl~~ 331 (434)
T 2oit_A 326 VSILAR 331 (434)
T ss_dssp CEEEEE
T ss_pred eeEEEe
Confidence 666654
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=2.1e-23 Score=187.44 Aligned_cols=229 Identities=11% Similarity=0.073 Sum_probs=179.6
Q ss_pred eeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccC-CeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
..+.+|...+.++.|+++ .++++++.|+.+.||.+.. +.....+..+. .+...+|+|+++.++++. ++.|++|
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~----~~~i~~~ 270 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK----GGSIYIF 270 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE----TTEEEEE
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe----CCEEEEe
Confidence 445789999999999998 6777888889999998753 44445555444 466779999999999885 8999999
Q ss_pred EccCCceeeeecc-----------cCcceEEEEec-cCCCEEEEeeCCCeEEEEeccCceeeeeE-eec-CCCeeEecCC
Q 023822 107 SLHDNKYLRYFKG-----------HHDRVVSLSLC-SSKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQ-GRPAAAYDDQ 172 (276)
Q Consensus 107 d~~~~~~~~~~~~-----------~~~~i~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~-~~~~~~~~~~ 172 (276)
|+...+ +..+.. |...+.+++|+ |+|++|++++ ++.|.+|++..++..... +.. .+..++|+ +
T Consensus 271 d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 271 NPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp CTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-S
T ss_pred cCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-C
Confidence 995443 334443 34478999999 9999998888 789999999887654432 222 45678999 9
Q ss_pred CcEEEEee-CCeEE-EEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCC
Q 023822 173 GLVFAVAF-GGYIR-MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS 250 (276)
Q Consensus 173 ~~~l~~~~-d~~i~-~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 250 (276)
++.++.+. +..+. +||+...+ ...+..+...+..++|+|+|++|++++.++.|++||+.+++...... +|
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~-----~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~---~~ 419 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGK-----AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER---SR 419 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCC-----EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CS
T ss_pred CCeEEEEECCCceEEEEECCCCC-----ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc---CC
Confidence 88777766 57777 88887643 22333566789999999999999999999999999999999888776 57
Q ss_pred CCceEEEEECCCCcEEEEecCCC
Q 023822 251 RNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 251 ~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
...+..++|+|||++|++++.++
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~ 442 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLK 442 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEEC
T ss_pred CCCccceEECCCCCeEEEEecCc
Confidence 88899999999999998887643
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=2.9e-22 Score=158.02 Aligned_cols=213 Identities=10% Similarity=0.048 Sum_probs=160.6
Q ss_pred CEEEEeecCCeEEEEEccCCeeeeeeeeeee--ceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeeccc----
Q 023822 47 SYLVTASDDESIRLYDVTAATCLKTINSKKY--GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH---- 120 (276)
Q Consensus 47 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~---- 120 (276)
++|++++.++.|++||+.+++.+..+..... .+..++|+|+++.++++... ++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT--TTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC--CCeEEEEECCCCCeEeeEEcCCccc
Confidence 4788999999999999999998887764332 47899999999887665542 789999999999887766531
Q ss_pred -CcceEEEEeccCCCEEEEee------------CCCeEEEEeccCceeeeeEe-ecCCCeeEecCCCcEEEEeeCCeEEE
Q 023822 121 -HDRVVSLSLCSSKDCFISGS------------LDRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVFAVAFGGYIRM 186 (276)
Q Consensus 121 -~~~i~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~d~~i~~ 186 (276)
...+..++|+|++++++++. .++.|.+||+.+++....+. ...+..++|+|+++.++++ ++.|++
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~~ 158 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLHV 158 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEEE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEEE
Confidence 22577899999999888886 57999999999988777664 3456789999999877776 789999
Q ss_pred EecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC------------------------cEEEEECCCCcEEE
Q 023822 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG------------------------HIHVLDSFRGTLLS 242 (276)
Q Consensus 187 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------------------------~i~i~d~~~~~~~~ 242 (276)
||+.+++. ...+..+. ....+.|+|+|++++..+.++ .|.+||+.+++..
T Consensus 159 ~d~~~~~~----~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 159 MDPEAGTL----VEDKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EETTTTEE----EEEECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EECCCCcE----eeeeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 99987543 22222222 111237899998776654332 4689999998875
Q ss_pred EeecCCCCCCceEEEEECCCCcEEEEe
Q 023822 243 TYNVKPVSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 243 ~~~~~~~~~~~v~~~~~s~~g~~l~~~ 269 (276)
.+... .+...+..++|+|||++|+++
T Consensus 233 ~~~~~-~~~~~~~~~~~s~dg~~l~~~ 258 (337)
T 1pby_B 233 MREVR-IMDVFYFSTAVNPAKTRAFGA 258 (337)
T ss_dssp EEEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred EeecC-CCCCceeeEEECCCCCEEEEe
Confidence 33322 355678899999999998887
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.2e-23 Score=180.70 Aligned_cols=230 Identities=11% Similarity=0.096 Sum_probs=164.1
Q ss_pred EEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeee---ceEEEEEeccCCeEEEeccC------CCCCceEEEEcc
Q 023822 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKN------GWDESLRLLSLH 109 (276)
Q Consensus 39 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~------~~d~~i~~~d~~ 109 (276)
.++|+|+++++++ +.|++|++||+.+++....+..+.. .+..++|+||+++|++++.. +.++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 7899999965555 4699999999999988777765544 38999999999999988641 014899999999
Q ss_pred CCcee--eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe-ec-------------------CCCee
Q 023822 110 DNKYL--RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-VQ-------------------GRPAA 167 (276)
Q Consensus 110 ~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~-------------------~~~~~ 167 (276)
+++.+ ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++...... .. ....+
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 88763 222 35688999999999999886 7899999998877654331 11 11479
Q ss_pred EecCCCcEEEEee-C-C---------------------------------eEEEEecccCCCC-Ceee---eeecCCCCC
Q 023822 168 AYDDQGLVFAVAF-G-G---------------------------------YIRMFDARKYEKG-PFDI---FSVGGDISD 208 (276)
Q Consensus 168 ~~~~~~~~l~~~~-d-~---------------------------------~i~~~d~~~~~~~-~~~~---~~~~~~~~~ 208 (276)
+|+|||+.|+.+. | + .|++||+.+++.. ...+ ..+..+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999888776 3 1 7889998765420 0011 112346667
Q ss_pred ceEEEECCCCcEEEEeecC----CcEEEEE----CCCCcEEEEee-cCCCCCCceE-----EEEECCCCcEEEE--ecCC
Q 023822 209 ANVVKFSNDGRLMLLTTME----GHIHVLD----SFRGTLLSTYN-VKPVSRNSTL-----EASFSPEGMFVIS--GRVS 272 (276)
Q Consensus 209 i~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~~~~~~~~-~~~~~~~~v~-----~~~~s~~g~~l~~--~~~d 272 (276)
+..++|+||++++++.... ..|.+|| ..+++....+. ....+...+. .++|+|||+.|+. +..+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC
Confidence 8999999999877764432 2488899 87777655441 0003556665 7899999986544 4444
Q ss_pred C
Q 023822 273 P 273 (276)
Q Consensus 273 g 273 (276)
|
T Consensus 335 g 335 (719)
T 1z68_A 335 G 335 (719)
T ss_dssp S
T ss_pred C
Confidence 4
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=3e-22 Score=174.05 Aligned_cols=224 Identities=8% Similarity=0.054 Sum_probs=161.9
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeec-----eEEEEEeccCCeEEEeccCCCC---------C
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYG-----VDLVCFTSHPTTVIYSSKNGWD---------E 101 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~~d---------~ 101 (276)
...+++|+||+++++++ |++|++||+.++++...+..+... ...+.|+||++++++++. + +
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~---~~~~~r~~~~~ 92 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN---YVKQWRHSYTA 92 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE---EEECSSSCEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEEC---CeeeEEEccce
Confidence 45689999999988886 899999999999887777666432 234889999999999885 4 6
Q ss_pred ceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe-e-------------------
Q 023822 102 SLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-V------------------- 161 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~------------------- 161 (276)
.+.+||+.+++.. .+..|...+...+|+|||+.|+.+. ++.|++||+.+++..+... .
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6789999998754 4666788899999999999998885 7899999998876544321 1
Q ss_pred cCCCeeEecCCCcEEEEee--CC-----------------------------------eEEEEeccc---CCCCCeeeee
Q 023822 162 QGRPAAAYDDQGLVFAVAF--GG-----------------------------------YIRMFDARK---YEKGPFDIFS 201 (276)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~--d~-----------------------------------~i~~~d~~~---~~~~~~~~~~ 201 (276)
.....+.|+|||+.|+... +. .|++||+.+ ++... ...
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~--~~~ 248 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT--SIQ 248 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC--EEE
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce--EEE
Confidence 1123488999999887764 22 477778776 42111 112
Q ss_pred ec------CCCCCceEEEECCCCcEEEEeec----CCcEEEEECCCCc----EEE--Ee-ecCCCCCCceE-----EEEE
Q 023822 202 VG------GDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGT----LLS--TY-NVKPVSRNSTL-----EASF 259 (276)
Q Consensus 202 ~~------~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~----~~~--~~-~~~~~~~~~v~-----~~~~ 259 (276)
+. .+...+..++|+|||+.++.... +..|++||+.+++ +.. .+ .. .+...+. .++|
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~--~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM--STTGWVGRFRPSEPHF 326 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE--CSSSCSSSSSCCCCEE
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec--cCCceEccCcCCCceE
Confidence 22 25567889999999997665532 3479999999887 221 12 11 3444443 7899
Q ss_pred CCCCcEEE-Eec
Q 023822 260 SPEGMFVI-SGR 270 (276)
Q Consensus 260 s~~g~~l~-~~~ 270 (276)
+|||+.|+ ..+
T Consensus 327 spDG~~l~~~~s 338 (740)
T 4a5s_A 327 TLDGNSFYKIIS 338 (740)
T ss_dssp CTTSSEEEEEEE
T ss_pred cCCCCEEEEEEE
Confidence 99999876 554
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=1.5e-20 Score=149.24 Aligned_cols=214 Identities=8% Similarity=0.059 Sum_probs=146.1
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEee-cCCeEEEEEccC-C--eeeeeeeee---------eeceEEEEEeccCCeE
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTAS-DDESIRLYDVTA-A--TCLKTINSK---------KYGVDLVCFTSHPTTV 91 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~l 91 (276)
+....+..+...+..++|+|++++|++++ .++.+.+|++.. + +.+..+... ...+.+++|+|+++.+
T Consensus 76 ~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~ 155 (347)
T 3hfq_A 76 HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLA 155 (347)
T ss_dssp EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEE
T ss_pred EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEE
Confidence 34444555777889999999999988887 789999999963 3 223332211 1247889999999944
Q ss_pred EEeccCCCCCceEEEEcc-CCceee--eecc-cCcceEEEEeccCCCEEEE-eeCCCeEEEEeccC--ceeee--eEee-
Q 023822 92 IYSSKNGWDESLRLLSLH-DNKYLR--YFKG-HHDRVVSLSLCSSKDCFIS-GSLDRTVLLWDQRA--EKCQG--LLRV- 161 (276)
Q Consensus 92 ~~~~~~~~d~~i~~~d~~-~~~~~~--~~~~-~~~~i~~~~~~~~~~~l~~-~~~d~~i~iwd~~~--~~~~~--~~~~- 161 (276)
++... ++.|.+|++. +++... .+.. ....+..++|+|+++++++ ...++.|.+|++.. ++... .+..
T Consensus 156 v~~~~---~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 232 (347)
T 3hfq_A 156 VIDLG---SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTI 232 (347)
T ss_dssp EEETT---TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESS
T ss_pred EEeCC---CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeec
Confidence 44444 7899999998 454322 2222 2235778999999996555 56688999999884 44322 2211
Q ss_pred -------cCCCeeEecCCCcEEEEe-e-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-CcEE
Q 023822 162 -------QGRPAAAYDDQGLVFAVA-F-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-GHIH 231 (276)
Q Consensus 162 -------~~~~~~~~~~~~~~l~~~-~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~i~ 231 (276)
.....++|+|++++++++ . ++.|.+|++.... ..........+...+..++|+|+|++|++++.+ +.|.
T Consensus 233 ~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 233 PADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp CTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEE
Confidence 124469999999876444 4 7999999997422 112233344445568899999999988888754 8999
Q ss_pred EE--ECCCCcEEE
Q 023822 232 VL--DSFRGTLLS 242 (276)
Q Consensus 232 i~--d~~~~~~~~ 242 (276)
+| |..++++..
T Consensus 312 v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 312 LYARDLTSGKLSL 324 (347)
T ss_dssp EEEECTTTCCEEE
T ss_pred EEEEeCCCCeEEe
Confidence 99 556677654
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=2.4e-21 Score=153.59 Aligned_cols=209 Identities=11% Similarity=-0.008 Sum_probs=155.3
Q ss_pred ccceeeccCC-CcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeee------eeceEEEEEeccCCeEEEecc
Q 023822 25 EVGMSFRDYN-GRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSK------KYGVDLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 25 ~~~~~~~~h~-~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~ 96 (276)
+....+..+. ..+..++|+|++++++ ++..++.|.+||+.+++.+..+... ...+..++|+|++++++++..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcc
Confidence 3334444332 2577899999998665 5557899999999999887776532 234789999999999999885
Q ss_pred CCCC------------CceEEEEccCCcee---eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee
Q 023822 97 NGWD------------ESLRLLSLHDNKYL---RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 161 (276)
Q Consensus 97 ~~~d------------~~i~~~d~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 161 (276)
+ +.|.+||+.+++.. ..+. +...+.+++|+|+++ +++++. .|.+||+.+++....+..
T Consensus 112 ---~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 112 ---PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp ---EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECS
T ss_pred ---cccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccc
Confidence 4 89999999885433 3333 444688999999999 555543 499999988876655422
Q ss_pred c----------------------------------------------------------------------CCCeeEecC
Q 023822 162 Q----------------------------------------------------------------------GRPAAAYDD 171 (276)
Q Consensus 162 ~----------------------------------------------------------------------~~~~~~~~~ 171 (276)
. ....++++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 264 (349)
T 1jmx_B 185 RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSP 264 (349)
T ss_dssp TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECS
T ss_pred cccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecC
Confidence 1 112456678
Q ss_pred -CCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeec
Q 023822 172 -QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (276)
Q Consensus 172 -~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (276)
++++++++ ++.|.+||+.+++. ...+. ....+.+++|+|+|++|++++.++.|++||..+++.+..+..
T Consensus 265 ~dg~~l~~~-~~~v~~~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 265 KDPNQIYGV-LNRLAKYDLKQRKL----IKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp SCTTEEEEE-ESEEEEEETTTTEE----EEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEE-cCeEEEEECccCeE----EEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 99888888 89999999987542 22222 233578999999999888888899999999999999988873
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=3.1e-22 Score=169.54 Aligned_cols=224 Identities=11% Similarity=0.084 Sum_probs=161.0
Q ss_pred eeeccCC-CcEEEEEEcCCCCEEEEeec---CCeEEEEEccC---CeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCC
Q 023822 28 MSFRDYN-GRISSMDFHKSSSYLVTASD---DESIRLYDVTA---ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 100 (276)
Q Consensus 28 ~~~~~h~-~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d 100 (276)
+.+..|. ..+..++|+|| +++++++. +...++|.+.. +... .+.... .....+|+|+++.++..+.. +
T Consensus 57 ~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~--~ 131 (582)
T 3o4h_A 57 VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGAT--E 131 (582)
T ss_dssp EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEEC--S
T ss_pred EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecC--C
Confidence 3444555 68999999999 77777765 45556655433 2222 332222 34466899998754443321 5
Q ss_pred CceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCC----CeEEEEeccCceeeeeE-eecCCCeeEecCCCcE
Q 023822 101 ESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLV 175 (276)
Q Consensus 101 ~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~ 175 (276)
+.+.+||+.+++...... +.. .+++|+|||+++++++.+ +.|++||+.+++..... +...+..++|+|||+.
T Consensus 132 ~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 132 DRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKV 208 (582)
T ss_dssp SCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCE
T ss_pred CCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCE
Confidence 566699999887655444 333 789999999999988877 78999999888765333 3333568999999999
Q ss_pred EEEee-CC--eEEEEecccCCCCCeeeeeecCCCCCceEEE--------ECCCCcEEEEeecCCcEEEEECCCCcEEEEe
Q 023822 176 FAVAF-GG--YIRMFDARKYEKGPFDIFSVGGDISDANVVK--------FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 176 l~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (276)
|+.+. ++ .|++||+.+++. . .+..+...+..++ |+|||.++++++.|+.+++|++ ++...
T Consensus 209 l~~~~~~~~~~i~~~d~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~-- 279 (582)
T 3o4h_A 209 TAGLETAREARLVTVDPRDGSV----E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE-- 279 (582)
T ss_dssp EEEEECSSCEEEEEECTTTCCE----E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC--
T ss_pred EEEccCCCeeEEEEEcCCCCcE----E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--
Confidence 98665 67 899999987553 2 4455666676677 9999988899999999999999 66544
Q ss_pred ecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 245 NVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 245 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
. ..+.+.+++|+ +|+++++++.+.
T Consensus 280 ~----~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 280 A----PQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp C----CSSEEEEEEEE-TTEEEEEEEETT
T ss_pred c----CCCceEEEEec-CCEEEEEEcCCC
Confidence 1 34678999999 999998887764
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.90 E-value=1.8e-20 Score=147.66 Aligned_cols=236 Identities=11% Similarity=0.108 Sum_probs=173.0
Q ss_pred CCcEEEEEEcCCCCEEEEeecC------------------------CeEEEEEccCCeeeeeee-eeeeceEEEEEeccC
Q 023822 34 NGRISSMDFHKSSSYLVTASDD------------------------ESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHP 88 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 88 (276)
-+.+.+++++|+|+++++...+ +.|.+||..+++.+..+. .+-.....+++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888777 479999998888776554 233468899999999
Q ss_pred CeEEEeccCCCCCceEEEEccCCc-eeeee---------cccCcceEEEEecc-CCCEEEEee-CCCeEEEEeccCceee
Q 023822 89 TTVIYSSKNGWDESLRLLSLHDNK-YLRYF---------KGHHDRVVSLSLCS-SKDCFISGS-LDRTVLLWDQRAEKCQ 156 (276)
Q Consensus 89 ~~l~~~~~~~~d~~i~~~d~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~ 156 (276)
+.+++... ++.|++||..... .+..+ ..+......++++| +++++++.+ .++.|++|| ..++.+
T Consensus 103 ~l~v~d~~---~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 103 NYWVTDVA---LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp CEEEEETT---TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CEEEEECC---CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 97776665 8999999986542 44444 23444688999999 788888776 689999999 455555
Q ss_pred eeEee------------cCCCeeEecCC-CcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECC------
Q 023822 157 GLLRV------------QGRPAAAYDDQ-GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN------ 216 (276)
Q Consensus 157 ~~~~~------------~~~~~~~~~~~-~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~------ 216 (276)
..+.. .....++++|+ +.++++.. ++.|++||..+++. ........+...+..++|+|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~~~~~~~~~~pg~~~~~ 256 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFGRNVFAISYIPGFLFAV 256 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTTTCEEEEEEETTEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccCCCcceeeecCCEEEEe
Confidence 55521 12557999998 77777766 79999999985442 22222234556788899999
Q ss_pred CCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 217 DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 217 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+|+.+++...+..|++|+..+++.+..+.....+...+..++++|+|.++++...++.|
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 33322223345589999999999998875323466779999999999888887777654
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.1e-19 Score=145.06 Aligned_cols=229 Identities=10% Similarity=0.088 Sum_probs=153.0
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEee-cCCeEEEEEccCCeeeeeee---e-----------eeeceEEEEEeccCC
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTAS-DDESIRLYDVTAATCLKTIN---S-----------KKYGVDLVCFTSHPT 89 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~---~-----------~~~~v~~~~~~~~~~ 89 (276)
+.+.....+......+++ ++++|++++ .++.|.+|++.....+..+. . +...+.+++|+|+++
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 334444445566777888 788777766 67899999997543332211 1 122357899999999
Q ss_pred eEEEeccCCCCCceEEEEccCCce------e-------eeecccCcceEEEEeccCCCEEEEee-CCCeEEEEeccCcee
Q 023822 90 TVIYSSKNGWDESLRLLSLHDNKY------L-------RYFKGHHDRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEKC 155 (276)
Q Consensus 90 ~l~~~~~~~~d~~i~~~d~~~~~~------~-------~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~ 155 (276)
+++++... ++.|.+|++..... + .....+...+..++|+|+++++++++ .++.|.+||+.+++.
T Consensus 168 ~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 168 YLLADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp EEEEEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred EEEEEeCC--CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 88776642 78999999875431 1 11223445678999999999877776 689999999987654
Q ss_pred eee--Eee-----cCCCeeEecCCCcEEEEee-C--CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee
Q 023822 156 QGL--LRV-----QGRPAAAYDDQGLVFAVAF-G--GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 156 ~~~--~~~-----~~~~~~~~~~~~~~l~~~~-d--~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
... +.. .....++|+|++++|+++. + +.|.+|++............... ...+..++|+|+|++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 246 DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 322 211 1234899999999876655 4 78999999632221112222333 45688999999999988887
Q ss_pred -cCCcEEEE--ECCCCcEEEEeecCCCCCCceEEEEEC
Q 023822 226 -MEGHIHVL--DSFRGTLLSTYNVKPVSRNSTLEASFS 260 (276)
Q Consensus 226 -~dg~i~i~--d~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (276)
.++.|.+| |..++++...... .+...+.++.|.
T Consensus 325 ~~~~~v~v~~~d~~~g~~~~~~~~--~~~~~p~~v~~~ 360 (361)
T 3scy_A 325 RDTNVIQIFERDQATGLLTDIKKD--IKVDKPVCLKFV 360 (361)
T ss_dssp TTTTEEEEEEECTTTCCEEECSCC--EECSSEEEEEEE
T ss_pred CCCCCEEEEEEECCCCcEeeccee--eeCCCCeEEEEc
Confidence 57889996 5557776554321 134568888885
No 163
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.89 E-value=2.2e-19 Score=141.60 Aligned_cols=241 Identities=8% Similarity=0.052 Sum_probs=169.0
Q ss_pred ceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCC----Cc
Q 023822 27 GMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD----ES 102 (276)
Q Consensus 27 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d----~~ 102 (276)
...+..+...+.+++|+|++++++++..++.|.+||.++++.......+...+.+++++++++.+++... + +.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~---~~~~~~~ 113 (333)
T 2dg1_A 37 WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG---DFKSTGG 113 (333)
T ss_dssp EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECT---TSSSCCE
T ss_pred eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCC---CCCCCce
Confidence 3455667777899999999998888888999999999887765544345567999999999987776654 4 68
Q ss_pred eEEEEccCCceeeeec--ccCcceEEEEeccCCCEEEEeeC------CCeEEEEeccCceeeeeE-eecCCCeeEecCCC
Q 023822 103 LRLLSLHDNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQG 173 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~ 173 (276)
|.+||..+++....+. .+...+.+++++|+++++++... .+.|..+|..+++..... .......++++|++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 9999988876543332 23457899999999987776653 356777776655443332 23345678999999
Q ss_pred cEEEEe-e-CCeEEEEecccCCCCCee-----eeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeec
Q 023822 174 LVFAVA-F-GGYIRMFDARKYEKGPFD-----IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 246 (276)
Q Consensus 174 ~~l~~~-~-d~~i~~~d~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 246 (276)
+.+..+ . ++.|.+||+......... ......+ ..+..++++++|+++++...++.|.+||. +++.+..+..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI 271 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc
Confidence 755444 3 689999998642111000 0111122 35778999999998887777889999997 5777777752
Q ss_pred CC---CCCCceEEEEECCCCcEEEEecCC
Q 023822 247 KP---VSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 247 ~~---~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
.. ++...+.+++|+||++.|+.++.+
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCc
Confidence 11 111268899999998777766555
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=2e-21 Score=156.36 Aligned_cols=237 Identities=10% Similarity=0.006 Sum_probs=163.3
Q ss_pred ccceeeccCCCcEEE-----EEEcCCCCEEEEeec-CC--eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEecc
Q 023822 25 EVGMSFRDYNGRISS-----MDFHKSSSYLVTASD-DE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~-----~~~~~~~~~l~~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 96 (276)
.....+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.......+...+..+.|+|+++.|+++..
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 344566677766666 899999999998887 66 4888999988887776666656667889999999999987
Q ss_pred CCCCCceEEEEccCCceeeeecccCcceEEEE--eccCCCEEEEe----------------------eCCCeEEEEeccC
Q 023822 97 NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLS--LCSSKDCFISG----------------------SLDRTVLLWDQRA 152 (276)
Q Consensus 97 ~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~----------------------~~d~~i~iwd~~~ 152 (276)
++.|++||+.+++....+..+...+.... ++|++++++.. ..+..|.+||+.+
T Consensus 101 ---~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 101 ---GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp ---TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred ---CCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 88999999999987766665665554444 48899887742 2446899999998
Q ss_pred ceeeeeE-eecCCCeeEecC-CCcEEEEeeC-------CeEEEEecccCCCCCeeeeeecCCC--CCceEEEECCCCcEE
Q 023822 153 EKCQGLL-RVQGRPAAAYDD-QGLVFAVAFG-------GYIRMFDARKYEKGPFDIFSVGGDI--SDANVVKFSNDGRLM 221 (276)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l 221 (276)
++..... ....+..+.|+| +++.++...+ ..|.++|...... ..+..+. ..+..++|+|+|+.|
T Consensus 178 g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 178 GESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-----RKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp CCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-----EESCCCCTTEEEEEEEECTTSSCE
T ss_pred CceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-----EEeeeCCCCcccccceECCCCCEE
Confidence 8765554 333456889999 9987776652 2678888765432 2222222 247788999999977
Q ss_pred EEeec-CC----cEEEEECCCCcEEEEeecCCCCCCc---eEEEEECCCCcEEEEec
Q 023822 222 LLTTM-EG----HIHVLDSFRGTLLSTYNVKPVSRNS---TLEASFSPEGMFVISGR 270 (276)
Q Consensus 222 ~~~~~-dg----~i~i~d~~~~~~~~~~~~~~~~~~~---v~~~~~s~~g~~l~~~~ 270 (276)
+..+. ++ .|++||+.+++........ ++... ...++|+|||+.|+...
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~ 308 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDV 308 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEEC-CEEEEEECTTSSEEEEEECCC----
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCC-CceeeeecCCCCeEccCCCcceeEe
Confidence 66543 22 3999999998754332210 11000 11237999999887643
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.2e-21 Score=169.89 Aligned_cols=225 Identities=9% Similarity=0.120 Sum_probs=157.4
Q ss_pred cEEEEEEcCCCCEEEEeec---------CCeEEEEEccCCeee--eeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 36 RISSMDFHKSSSYLVTASD---------DESIRLYDVTAATCL--KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
.+.+++|||||++|++++. ++.|++||+.+++.+ ..+ ...+..++|+|||+.|+++. ++.|+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~----~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY----QNNIY 133 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE----TTEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE----CCeEE
Confidence 3889999999999998876 789999999988863 222 24688999999999999986 88999
Q ss_pred EEEccCCceeeee-cccCcce-----------------EEEEeccCCCEEEEeeCCC-----------------------
Q 023822 105 LLSLHDNKYLRYF-KGHHDRV-----------------VSLSLCSSKDCFISGSLDR----------------------- 143 (276)
Q Consensus 105 ~~d~~~~~~~~~~-~~~~~~i-----------------~~~~~~~~~~~l~~~~~d~----------------------- 143 (276)
+|++.+++..+.. .++...+ .+++|+|||++|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 9999888765432 2222222 4899999999999987652
Q ss_pred -----------eEEEEeccCceee---ee-----E--eecCCCeeEecCCCcEEEEeeC-----CeEEEEe----cccCC
Q 023822 144 -----------TVLLWDQRAEKCQ---GL-----L--RVQGRPAAAYDDQGLVFAVAFG-----GYIRMFD----ARKYE 193 (276)
Q Consensus 144 -----------~i~iwd~~~~~~~---~~-----~--~~~~~~~~~~~~~~~~l~~~~d-----~~i~~~d----~~~~~ 193 (276)
.|++||+.+++.. .. + +...+..++|+|++++++...+ ..|.+|| ..+++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 7889999887643 11 1 2233568899999988777542 3488899 66654
Q ss_pred CCCeeeeeecCCCCCce-----EEEECCCCcEEEE--eecCC--cEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc
Q 023822 194 KGPFDIFSVGGDISDAN-----VVKFSNDGRLMLL--TTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (276)
Q Consensus 194 ~~~~~~~~~~~~~~~i~-----~~~~~~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 264 (276)
...........+...+. .++|+|+|+.|+. ...+| .|.+||+.+++ ...+. .+...+..+.++ +++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt---~~~~~v~~~~~~-d~~ 368 (719)
T 1z68_A 294 CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQIT---SGKWEAINIFRV-TQD 368 (719)
T ss_dssp CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECS---CSSSCEEEEEEE-CSS
T ss_pred eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecc---cCceEEEEEEEE-eCC
Confidence 32211100134555565 7899999986554 44455 57777877766 34444 345567777777 777
Q ss_pred EEEEecCC
Q 023822 265 FVISGRVS 272 (276)
Q Consensus 265 ~l~~~~~d 272 (276)
.|+..+.+
T Consensus 369 ~i~~~~~~ 376 (719)
T 1z68_A 369 SLFYSSNE 376 (719)
T ss_dssp EEEEEESC
T ss_pred EEEEEEec
Confidence 76665544
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.88 E-value=1.1e-19 Score=140.98 Aligned_cols=234 Identities=12% Similarity=0.061 Sum_probs=168.8
Q ss_pred cceeeccCCCcEEEEEEcCCCC-EEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 26 VGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
....+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++++++.+++... ++.|.
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~---~~~i~ 93 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHG---LRRLE 93 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETT---TTEEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecC---CCeEE
Confidence 3455556677788999999998 7788888999999999876 5566666677999999999997776654 68999
Q ss_pred EEEccCCceeeeeccc----CcceEEEEeccCCCEEEE----ee-------------CCCeEEEEeccCceeeeeE-eec
Q 023822 105 LLSLHDNKYLRYFKGH----HDRVVSLSLCSSKDCFIS----GS-------------LDRTVLLWDQRAEKCQGLL-RVQ 162 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~-------------~d~~i~iwd~~~~~~~~~~-~~~ 162 (276)
+||..+++........ ...+..++++|+|+++++ ++ ..+.|..++.. ++..... ...
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV 172 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence 9999887754433221 234678999999998887 33 13466666665 3332222 223
Q ss_pred CCCeeEecCCCcEEEEee-CCeEEEEeccc-CCC-CCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCc
Q 023822 163 GRPAAAYDDQGLVFAVAF-GGYIRMFDARK-YEK-GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 239 (276)
Q Consensus 163 ~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~-~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 239 (276)
....++|+|+++++++.. ++.|.+||+.. +.. .....+ ..+...+..++++++|+++++. ++.|.+||.. ++
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD 247 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC
Confidence 345799999998885554 68999999872 221 001122 3345567889999999866655 7889999975 88
Q ss_pred EEEEeecCCCCCCceEEEEE-CCCCcEEEEecCCCC
Q 023822 240 LLSTYNVKPVSRNSTLEASF-SPEGMFVISGRVSPF 274 (276)
Q Consensus 240 ~~~~~~~~~~~~~~v~~~~~-s~~g~~l~~~~~dg~ 274 (276)
.+..+. .+.. +.+++| +|+++.|++++.+++
T Consensus 248 ~~~~~~---~~~~-~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 248 ELGRVL---TPQT-TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp EEEEEE---CSSC-CCEEEEESTTSCEEEEEETTEE
T ss_pred EEEEEE---CCCC-ceeEEEECCCCCEEEEEcCCeE
Confidence 888777 3445 889999 689999988887765
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=2.9e-21 Score=155.51 Aligned_cols=237 Identities=10% Similarity=0.011 Sum_probs=159.3
Q ss_pred eeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEE--EEeccCCeEEEecc---------
Q 023822 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLV--CFTSHPTTVIYSSK--------- 96 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~~~--------- 96 (276)
....+|...+..++|+||++.|+.++.++.|++||+.+++....+..+...+... .++++++.++....
T Consensus 74 ~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 74 QLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp ECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred EeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccc
Confidence 3344555556678999999999999999999999999988776666555444333 34889988874320
Q ss_pred ----------CCCCCceEEEEccCCceeeeecccCcceEEEEecc-CCCEEEEeeCC------CeEEEEeccCceeeeeE
Q 023822 97 ----------NGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLD------RTVLLWDQRAEKCQGLL 159 (276)
Q Consensus 97 ----------~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~ 159 (276)
.+.+..|.+||+.+++... +..+...+..++|+| +++.|+.+..+ ..|.++|+...+.....
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence 1125789999999886544 445677789999999 99988877653 37888887765443333
Q ss_pred eec---CCCeeEecCCCcEEEE-ee-CC----eEEEEecccCCCCCeeeeeecCCC---CCceEEEECCCCcEEEEe---
Q 023822 160 RVQ---GRPAAAYDDQGLVFAV-AF-GG----YIRMFDARKYEKGPFDIFSVGGDI---SDANVVKFSNDGRLMLLT--- 224 (276)
Q Consensus 160 ~~~---~~~~~~~~~~~~~l~~-~~-d~----~i~~~d~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~--- 224 (276)
... .+....|+|+|+.|+. +. ++ .|++||+.+++... +.....+. .....++|+|+|+.|+..
T Consensus 233 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~--l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 233 THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ--LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE--EEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE--EEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 222 2446789999986644 33 22 39999998865321 22222210 012234799999988754
Q ss_pred ------ecCCcEEEEECCCCcEEEEeecCCCCCC-----------ceEEEEECCCCcEEEEecC
Q 023822 225 ------TMEGHIHVLDSFRGTLLSTYNVKPVSRN-----------STLEASFSPEGMFVISGRV 271 (276)
Q Consensus 225 ------~~dg~i~i~d~~~~~~~~~~~~~~~~~~-----------~v~~~~~s~~g~~l~~~~~ 271 (276)
..+..|++||+.+++... +.. +.. .+..++|+|||++|+..+.
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~~~-l~~---~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~ 370 (388)
T 3pe7_A 311 DSGYKIENDPFLYVFNMKNGTQHR-VAR---HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSD 370 (388)
T ss_dssp ------CCCCEEEEEETTTTEEEE-EEE---CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ccccccCCCCEEEEEeccCCceEE-ecc---ccCcccccccccccCCCCccCCCCCCEEEEEec
Confidence 446689999998877643 432 333 4778899999998877664
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=3.6e-19 Score=137.43 Aligned_cols=234 Identities=9% Similarity=0.161 Sum_probs=167.9
Q ss_pred ccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee------eeeceEEEEEe-ccCCeEEEeccCCCCCce
Q 023822 31 RDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS------KKYGVDLVCFT-SHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 31 ~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~l~~~~~~~~d~~i 103 (276)
.++-..+.+++++++++++++...++.|.+||.. ++.+..+.. +...+..+++. +++..+++... .++.|
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~--~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS--PTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG--GGCEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC--CCCEE
Confidence 3456779999999999988888889999999976 665555532 23467899995 55555554421 16889
Q ss_pred EEEEccCCceeeeec-ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe----ecCCCeeEecCCCcEEEE
Q 023822 104 RLLSLHDNKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR----VQGRPAAAYDDQGLVFAV 178 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~ 178 (276)
.+|| .+++.+..+. .+...+..++++|+++++++...++.|.+||.. ++....+. ...+..++++++++++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 5666666553 234568999999999988887788999999965 44444442 123568999999998887
Q ss_pred ee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC-cEEEEECCCCcEEEEeecCCCCCCceEE
Q 023822 179 AF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (276)
Q Consensus 179 ~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 256 (276)
.. ++.|++||.... ....+...++...+..++++|+|+++++...++ .|.+||. +++.+..+.... ....+.+
T Consensus 181 ~~~~~~i~~~~~~g~---~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~~ 255 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQ---YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-KHAQCFD 255 (286)
T ss_dssp EGGGTEEEEEETTCC---EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-CCSCEEE
T ss_pred ECCCCEEEEEcCCCC---EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-CCCccee
Confidence 76 799999997531 111222222235688999999999888887776 9999994 677777776422 2335789
Q ss_pred EEECCCCcEEEEecCCCCC
Q 023822 257 ASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 257 ~~~s~~g~~l~~~~~dg~v 275 (276)
++++|+|+++++ +.|+.|
T Consensus 256 i~~~~~g~l~vs-~~~~~v 273 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRL 273 (286)
T ss_dssp EEEETTTEEEEE-ETTTEE
T ss_pred EEECCCCcEEEE-CCCCeE
Confidence 999999987777 456644
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=3.2e-19 Score=142.17 Aligned_cols=227 Identities=15% Similarity=0.142 Sum_probs=155.2
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEee----------cCCeEEEEEccCCeeeeeeeee------eeceEEEEEec
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK------KYGVDLVCFTS 86 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~ 86 (276)
+.+....+..+..+ .++|+||+++|+++. .++.|.+||..+++.+..+... ......++++|
T Consensus 40 t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp 117 (361)
T 2oiz_A 40 NGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT 117 (361)
T ss_dssp TCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT
T ss_pred CCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC
Confidence 34445566666555 899999999999886 3678999999999888887643 23467899999
Q ss_pred cCCeEEEeccCCCCCceEEEEccCCceeee-ecccCcceEEEEeccCC-CEEEEee------------------------
Q 023822 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSK-DCFISGS------------------------ 140 (276)
Q Consensus 87 ~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~------------------------ 140 (276)
++++++++... .++.|.+||+.+++.+.. +.. ... ..+.+.|++ ..+++.+
T Consensus 118 dg~~l~v~n~~-~~~~v~v~d~~~~~~~~~~i~~-~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~ 194 (361)
T 2oiz_A 118 DGKFIVLQNAS-PATSIGIVDVAKGDYVEDVTAA-AGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQ 194 (361)
T ss_dssp TSSEEEEEEES-SSEEEEEEETTTTEEEEEEGGG-TTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCC
T ss_pred CCCEEEEECCC-CCCeEEEEECCCCcEEEEEecC-CCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccc
Confidence 99999998641 157899999999988776 432 111 112222322 2223333
Q ss_pred ------------------------CCCeEEEEeccCcee--eeeE------------eecCCCeeEecCCCcEEEEee--
Q 023822 141 ------------------------LDRTVLLWDQRAEKC--QGLL------------RVQGRPAAAYDDQGLVFAVAF-- 180 (276)
Q Consensus 141 ------------------------~d~~i~iwd~~~~~~--~~~~------------~~~~~~~~~~~~~~~~l~~~~-- 180 (276)
.++.|.++|+..... ...+ ...+...++++|++..+.+..
T Consensus 195 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~ 274 (361)
T 2oiz_A 195 MFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHP 274 (361)
T ss_dssp CSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEES
T ss_pred eEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEcc
Confidence 344455555443211 1111 011223478899875555432
Q ss_pred ----------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC--cEEEEeecCC
Q 023822 181 ----------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG--TLLSTYNVKP 248 (276)
Q Consensus 181 ----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~ 248 (276)
.+.|.+||+.+.+. +..+..+. +..++|+|+|++|++++. +.|.+||..++ +.+..+.
T Consensus 275 ~~~~~~~~~~~~~v~viD~~t~~~----v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~--- 344 (361)
T 2oiz_A 275 DGKEGTHKFPAAEIWVMDTKTKQR----VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIE--- 344 (361)
T ss_dssp SCCTTCTTCCCSEEEEEETTTTEE----EEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEET---
T ss_pred CCCcccccCCCceEEEEECCCCcE----EEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEec---
Confidence 24899999988653 44455554 899999999999998887 99999999999 9888875
Q ss_pred CCCCceEEEEECCCCc
Q 023822 249 VSRNSTLEASFSPEGM 264 (276)
Q Consensus 249 ~~~~~v~~~~~s~~g~ 264 (276)
........++++|+|+
T Consensus 345 ~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 345 GAAEASLQVQFHPVGG 360 (361)
T ss_dssp TSCSSEEEEEECCCSC
T ss_pred cCCCCcEEEEecCCCC
Confidence 4667788999999986
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.86 E-value=6.7e-19 Score=152.42 Aligned_cols=233 Identities=12% Similarity=0.082 Sum_probs=160.9
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCC-----eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCC-------
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDE-----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW------- 99 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------- 99 (276)
+|...+..++|||||++||.+..++ .|++||+.+++....... ...+..++|+||++.|+.+.....
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3555788999999999998776543 899999999987664332 234678999999999999886211
Q ss_pred ------CCceEEEEccCCcee--e--eecccCcceEEEEeccCCCEEEEeeC-----CCeEEEEeccC------ce-eee
Q 023822 100 ------DESLRLLSLHDNKYL--R--YFKGHHDRVVSLSLCSSKDCFISGSL-----DRTVLLWDQRA------EK-CQG 157 (276)
Q Consensus 100 ------d~~i~~~d~~~~~~~--~--~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~-~~~ 157 (276)
...|++|++.+++.. . ....|...+..+.|+|||++|+..+. +..|++||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 123999999887632 2 22234556789999999998887765 56899999986 42 233
Q ss_pred eEe-ecCCCeeEecCCCcEEEEee--C---CeEEEEecccCCCCCeeeeeecCCC-CCceEEEECCCCcEEEEeecCCc-
Q 023822 158 LLR-VQGRPAAAYDDQGLVFAVAF--G---GYIRMFDARKYEKGPFDIFSVGGDI-SDANVVKFSNDGRLMLLTTMEGH- 229 (276)
Q Consensus 158 ~~~-~~~~~~~~~~~~~~~l~~~~--d---~~i~~~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~- 229 (276)
.+. ........++|++..++..+ + ..|.+||+.++......... .... ..+..++|++++.++++...++.
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~lv~~~~~~g~~ 359 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNFLVLCYLHDVKN 359 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTEEEEEEEETTEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCEEEEEEEECCEE
Confidence 332 22222345778876555544 2 46999998775321111211 2222 35778899988888888888884
Q ss_pred -EEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEe
Q 023822 230 -IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 230 -i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 269 (276)
|.+|++.+++.+..+. .+.+.+..++++|+++.++..
T Consensus 360 ~l~~~~~~~g~~~~~l~---~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 360 TLQLHDLATGALLKIFP---LEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp EEEEEETTTCCEEEEEC---CCSSEEEEEECCTTCSEEEEE
T ss_pred EEEEEECCCCCEEEecC---CCCceEEEEecCCCCCEEEEE
Confidence 6667877888777777 457788999999999766544
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.85 E-value=8.1e-20 Score=156.99 Aligned_cols=239 Identities=10% Similarity=0.036 Sum_probs=165.6
Q ss_pred eeccCCCcEEEEEEcCCCCEEEEe--ecCCeEEEEEccCCeeeeeeeeeeeceE---------EEEEe--ccCCe-EEEe
Q 023822 29 SFRDYNGRISSMDFHKSSSYLVTA--SDDESIRLYDVTAATCLKTINSKKYGVD---------LVCFT--SHPTT-VIYS 94 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~ 94 (276)
.+.+|...+..++|+++.-+++.. +.++...||....+.....+..+...+. ...|+ ||++. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 356788999999999886666666 5588999999655555556665555555 56666 99998 7776
Q ss_pred ccCCCCCceEEEEcc--CCceeeeecc-----cCcceEEEEeccCCCEEEEeeCC----------CeEEEEeccC-----
Q 023822 95 SKNGWDESLRLLSLH--DNKYLRYFKG-----HHDRVVSLSLCSSKDCFISGSLD----------RTVLLWDQRA----- 152 (276)
Q Consensus 95 ~~~~~d~~i~~~d~~--~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~----- 152 (276)
... +..|.++++. .......+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 98 ~~~--~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFG--DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTT--TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECC--CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 642 5567777765 2033445554 66788999999999999988876 5899999988
Q ss_pred -ceeeeeE-e-ecCCCeeEecCCCcEEEEee-C--------CeEEEEecc-cCCCCCeeeeeecCCCCCceEEEECCCCc
Q 023822 153 -EKCQGLL-R-VQGRPAAAYDDQGLVFAVAF-G--------GYIRMFDAR-KYEKGPFDIFSVGGDISDANVVKFSNDGR 219 (276)
Q Consensus 153 -~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~-d--------~~i~~~d~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (276)
++..... . ...+..++|+|+|+.|+... + ..|++||+. ++..... ......+...+..++|+|||+
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~-~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADT-RTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEE-EEEEEETTBCEEEEEECTTSC
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCccccc-EEeCCCCCceEcceEECCCCe
Confidence 5443322 1 22345789999999887665 4 379999998 4411011 112223456789999999999
Q ss_pred EEEEeecCC--cEEEEECCCCcEEEEeecCCCCCCc--------eEEEEECCCCcEEEEecCCCC
Q 023822 220 LMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNS--------TLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 220 ~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~--------v~~~~~s~~g~~l~~~~~dg~ 274 (276)
++++++.++ .|.+||..+++...... .+... +..++|+|+++++++++. +.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~---~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~ 315 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCR---REEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA 315 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSC---CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS
T ss_pred EEEEECCCCCeEEEEEECCCCceeeccc---ccccccCccccccCceEeEeCCCEEEEEEEc-Cc
Confidence 878887788 67777776776554433 12111 567899999999998876 54
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=5.6e-19 Score=140.75 Aligned_cols=223 Identities=8% Similarity=0.021 Sum_probs=147.9
Q ss_pred CCCEEEEee------cCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEecc-------CCCCCceEEEEccCC
Q 023822 45 SSSYLVTAS------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK-------NGWDESLRLLSLHDN 111 (276)
Q Consensus 45 ~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~~~d~~i~~~d~~~~ 111 (276)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+|++++++++.. +..++.|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 455555543 4789999999999988888776655 8999999999998862 011577999999998
Q ss_pred ceeeeeccc------CcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeee-EeecCCCeeEecCCC--cEEEEee
Q 023822 112 KYLRYFKGH------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQG--LVFAVAF 180 (276)
Q Consensus 112 ~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~--~~l~~~~ 180 (276)
+.+..+... ......++++|++++|+++.. +++|.+||+.+.+.+.. +.......+.+.|++ .+++.+.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEET
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECC
Confidence 888777532 234678999999999988864 57999999999988776 422221112233322 1222222
Q ss_pred CCeEEEEe------------------------------------------------cccCCCCCeeeeeecC--------
Q 023822 181 GGYIRMFD------------------------------------------------ARKYEKGPFDIFSVGG-------- 204 (276)
Q Consensus 181 d~~i~~~d------------------------------------------------~~~~~~~~~~~~~~~~-------- 204 (276)
||.+.+|+ +...............
T Consensus 172 dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
T 2oiz_A 172 DGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNW 251 (361)
T ss_dssp TSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTC
T ss_pred CCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccccc
Confidence 33333333 3221110000000000
Q ss_pred CCCCceEEEECCCCcEEEEeec-----------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 205 DISDANVVKFSNDGRLMLLTTM-----------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 205 ~~~~i~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.......++|+|+++.++++.. .+.|.+||+.+++.+..+. .+. +.+++|+|||++|++++. +
T Consensus 252 ~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~---~~~--p~~ia~spdg~~l~v~n~-~ 325 (361)
T 2oiz_A 252 VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP---GRD--ALSMTIDQQRNLMLTLDG-G 325 (361)
T ss_dssp EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE---CTT--CCEEEEETTTTEEEEECS-S
T ss_pred ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe---cCC--eeEEEECCCCCEEEEeCC-C
Confidence 0011223789999887777643 3479999999999999998 344 899999999999998876 5
Q ss_pred CC
Q 023822 274 FS 275 (276)
Q Consensus 274 ~v 275 (276)
.|
T Consensus 326 ~v 327 (361)
T 2oiz_A 326 NV 327 (361)
T ss_dssp CE
T ss_pred eE
Confidence 54
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=3.8e-20 Score=149.20 Aligned_cols=220 Identities=8% Similarity=-0.010 Sum_probs=150.9
Q ss_pred EEEEEEcCCCCEEEEeecC---CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce
Q 023822 37 ISSMDFHKSSSYLVTASDD---ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (276)
Q Consensus 37 v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~ 113 (276)
+..++|+|||++|+..... ..|.+||+.+++.......+......+.|+|+++.|+.+.. ++.|++||+.+++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~---~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN---ELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET---TTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc---CCcEEEEECCCCCc
Confidence 7788999999998876543 47889999888765443333322334789999999999887 77899999998876
Q ss_pred eeeecccCcceEE-------------------EEeccCCCEEEEe-----eCCCeEEEEeccCceeeeeE-eecCCCeeE
Q 023822 114 LRYFKGHHDRVVS-------------------LSLCSSKDCFISG-----SLDRTVLLWDQRAEKCQGLL-RVQGRPAAA 168 (276)
Q Consensus 114 ~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~ 168 (276)
......+...... +.|+|+++.++.. ..+..|++||+.+++..... ....+..+.
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~ 194 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPI 194 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccce
Confidence 6555434432222 3567777766554 35678999999988765554 333456789
Q ss_pred ecC-CCcEEEEee-C------CeEEEEecccCCCCCeeeeeecCC--CCCceEEEECCCCcEEEEeecC-----CcEEEE
Q 023822 169 YDD-QGLVFAVAF-G------GYIRMFDARKYEKGPFDIFSVGGD--ISDANVVKFSNDGRLMLLTTME-----GHIHVL 233 (276)
Q Consensus 169 ~~~-~~~~l~~~~-d------~~i~~~d~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~ 233 (276)
|+| ++..++... + ..|.+||+...+. ..+..+ ...+..++|+|+|++|+.++.+ +.|++|
T Consensus 195 ~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 195 YRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-----RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-----EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred ECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-----eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 999 777555444 2 4688888865432 111112 2357788999999988777543 449999
Q ss_pred ECCCCcEEEEeecCCCCCCceEEEEECC-CCcEEEEec
Q 023822 234 DSFRGTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGR 270 (276)
Q Consensus 234 d~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~ 270 (276)
|+.+++...... ... .. +.|+| ||+++++++
T Consensus 270 d~~~g~~~~l~~----~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 270 NPETLENEEVMV----MPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp CTTTCCEEEEEE----CCS-EE-EEEECSSSSEEEEEE
T ss_pred ECCCCCeEEeee----CCC-CC-CCccCCCCceEEEec
Confidence 998887654433 111 23 89999 999888754
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.85 E-value=2.2e-18 Score=136.58 Aligned_cols=218 Identities=9% Similarity=0.067 Sum_probs=150.2
Q ss_pred CcEEEEEEcCCCCEEEEeecC---C--eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC------------
Q 023822 35 GRISSMDFHKSSSYLVTASDD---E--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN------------ 97 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d---~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------------ 97 (276)
..+..++|+|||+.|+..+.+ + .|.+|++.+++.......+ . +..+.|+|+++.|+.++..
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457889999999999987754 3 4888888887765554443 3 8999999999999988641
Q ss_pred ------------CCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCC-------eEEEEeccCceeeee
Q 023822 98 ------------GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR-------TVLLWDQRAEKCQGL 158 (276)
Q Consensus 98 ------------~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~i~iwd~~~~~~~~~ 158 (276)
.....|.+||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++....
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l 213 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKM 213 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEe
Confidence 0025799999988876455554 3 78899999999 777776542 334444444443332
Q ss_pred EeecCCCeeEecCCCcEEEEee-C--------CeEEEEecccCCCCCeeeeeecCCCCCceE-EEECCCCcEEEEeecCC
Q 023822 159 LRVQGRPAAAYDDQGLVFAVAF-G--------GYIRMFDARKYEKGPFDIFSVGGDISDANV-VKFSNDGRLMLLTTMEG 228 (276)
Q Consensus 159 ~~~~~~~~~~~~~~~~~l~~~~-d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg 228 (276)
... .....++|+|+.++... + ..|.+|| +++. ......+...+.. +.|+ ++ ++++++.++
T Consensus 214 ~~~--~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~----~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 214 FEK--VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV----MGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEE--ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE----EESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred ccC--cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCce----EeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 222 33344589998766554 3 3688888 3221 2222344566776 8999 88 888899999
Q ss_pred cEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 229 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 229 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.++|| +.+++...... +...|.+++|+| .++++++.++.
T Consensus 284 ~~~l~-~~~g~~~~~~~----~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIAK----GRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp EEEEE-EESSSEEEEEC----SSSEEEEEEESS--SEEEEEECSSS
T ss_pred cEEEE-EcCCceEEEec----CCCeEEeeeeeC--cEEEEEcCCCC
Confidence 99999 87666544433 477899999999 67777666654
No 175
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=2.3e-18 Score=137.53 Aligned_cols=198 Identities=11% Similarity=0.030 Sum_probs=139.5
Q ss_pred EEEEEEcCCCCE--EEEee-------------cCCeEEEEEcc-CCeeeeeeee----eeeceEEEEEeccCCeEEEecc
Q 023822 37 ISSMDFHKSSSY--LVTAS-------------DDESIRLYDVT-AATCLKTINS----KKYGVDLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 37 v~~~~~~~~~~~--l~~~~-------------~d~~i~iwd~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~ 96 (276)
+.+++|+|+|++ ++++. .++.+.+|++. +++....+.. +...+..++|+|++++++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 556899999994 55553 68999999997 4655444432 3457899999999999887754
Q ss_pred CCCCCceEEEEcc-CCcee--eeec--ccCcceEEEEeccCCCEEEEeeC-CCeEEEEecc--Cceeee---eEe---e-
Q 023822 97 NGWDESLRLLSLH-DNKYL--RYFK--GHHDRVVSLSLCSSKDCFISGSL-DRTVLLWDQR--AEKCQG---LLR---V- 161 (276)
Q Consensus 97 ~~~d~~i~~~d~~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~~~~---~~~---~- 161 (276)
. ++.|++|++. +++.. ..+. .|...+..++|+|+++++++++. ++.|.+|+++ +++... .+. .
T Consensus 165 ~--~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 165 T--ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp T--TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred C--CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 2 6899999998 67643 2333 23566899999999998887765 6899999875 444321 121 1
Q ss_pred ----c-------CCCeeE-ecCCCcEEEEee--CC-----eEEEEeccc-CCCCCeeee-eecCCCCCceEEEECC---C
Q 023822 162 ----Q-------GRPAAA-YDDQGLVFAVAF--GG-----YIRMFDARK-YEKGPFDIF-SVGGDISDANVVKFSN---D 217 (276)
Q Consensus 162 ----~-------~~~~~~-~~~~~~~l~~~~--d~-----~i~~~d~~~-~~~~~~~~~-~~~~~~~~i~~~~~~~---~ 217 (276)
. .+..++ |+|++++|+++. ++ .|.+|++.. ++. .... ....+...+..++|+| +
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~--~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI--EKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE--EEEEEEEECSSCCTTCCCEEECTTC
T ss_pred cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE--EEeeeeeecCCCCcccceecCCCcC
Confidence 1 245688 999998776665 33 899999963 221 1111 1223444577899999 8
Q ss_pred CcEEEEeecC-CcEEEEECCCC
Q 023822 218 GRLMLLTTME-GHIHVLDSFRG 238 (276)
Q Consensus 218 ~~~l~~~~~d-g~i~i~d~~~~ 238 (276)
|++|++++.+ +.|.+|++...
T Consensus 321 g~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEEEcCCCeEEEEEEchh
Confidence 9999998864 89999998765
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=1.9e-18 Score=148.47 Aligned_cols=231 Identities=10% Similarity=0.028 Sum_probs=155.7
Q ss_pred eeeccCCCcEE---------EEEEc--CCCCE-EEEeec-CCeEEEEEcc--CCeeeeeeee-----eeeceEEEEEecc
Q 023822 28 MSFRDYNGRIS---------SMDFH--KSSSY-LVTASD-DESIRLYDVT--AATCLKTINS-----KKYGVDLVCFTSH 87 (276)
Q Consensus 28 ~~~~~h~~~v~---------~~~~~--~~~~~-l~~~~~-d~~i~iwd~~--~~~~~~~~~~-----~~~~v~~~~~~~~ 87 (276)
+.+..|...+. ...|+ |||+. |+.++. +..|.++++. .......+.. +...+..++|+||
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETT
T ss_pred ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCC
Confidence 44556665655 56666 99998 776553 5667777765 2033444444 5667899999999
Q ss_pred CCeEEEeccCCCC----------CceEEEEccC------Cceeeeec-ccCcceEEEEeccCCCEEEEeeCC--------
Q 023822 88 PTTVIYSSKNGWD----------ESLRLLSLHD------NKYLRYFK-GHHDRVVSLSLCSSKDCFISGSLD-------- 142 (276)
Q Consensus 88 ~~~l~~~~~~~~d----------~~i~~~d~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d-------- 142 (276)
++.|++++. + ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+
T Consensus 141 g~~l~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 141 RGEVWCMAE---EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTEEEEEEE---EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred CCEEEEEEe---cccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 999998886 4 6899999988 544 4454 566778889999999999887755
Q ss_pred CeEEEEecc-Cc---eeeeeEe--ecCCCeeEecCCCcEEEEee-CC--eEEEEecccCCCCCeeeeeecCCCC------
Q 023822 143 RTVLLWDQR-AE---KCQGLLR--VQGRPAAAYDDQGLVFAVAF-GG--YIRMFDARKYEKGPFDIFSVGGDIS------ 207 (276)
Q Consensus 143 ~~i~iwd~~-~~---~~~~~~~--~~~~~~~~~~~~~~~l~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~------ 207 (276)
..|++||+. ++ +...... ...+..+.|+|+|++++++. ++ .|.+||+.+++. ..+ ...+..
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~--~~l--~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA--TQL--CRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE--EES--SCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce--eec--ccccccccCccc
Confidence 379999998 56 3333333 24566899999999776666 56 677777654331 111 111111
Q ss_pred --CceEEEECCCCcEEEEeecCCcEEEE--ECCCCcEEEEeecCCCCCCceEEE-EECCCCcEEEEecC
Q 023822 208 --DANVVKFSNDGRLMLLTTMEGHIHVL--DSFRGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVISGRV 271 (276)
Q Consensus 208 --~i~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~~~~ 271 (276)
.+..++|+|+++++++++. +.++|| |..+++ +..+. .+...+..+ +++++.-++++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~---~~~~~~~~~~s~~~~~~~~~~~~~ 356 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAA---GPWTEWAATLTVSGTRAVGVAASP 356 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECC---SSCCEEEEEEEEETTEEEEEEEET
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEec---CCCCeEEEEEecCCCEEEEEEcCC
Confidence 1567999999999999988 999999 655555 55665 456677766 55444333444443
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.83 E-value=8.8e-18 Score=128.42 Aligned_cols=229 Identities=10% Similarity=0.035 Sum_probs=158.4
Q ss_pred cEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 36 RISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
...++++++++++++ +...++.|.+|+..+.............+..+++.++++ ++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF---NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET---TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC---CCEEEEEeCCCceEe
Confidence 678999999998777 546788999999765543322222334678899999888 444444 788999998765433
Q ss_pred eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-CCeEEEEeccc
Q 023822 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARK 191 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~ 191 (276)
.........+..++++++++++++...++.|.+|+..+....... .......++++++++++++.. ++.|.+||...
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 222223356889999999998777777889999986654433222 223467899999998777776 68999999876
Q ss_pred CCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
... ..........+..++++++|.++++...++.|.+|+........... .+...+.+++++++|+++++...
T Consensus 181 ~~~----~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 181 NNQ----VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF---TGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp CCE----EECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC---CSCSCEEEEEECTTCCEEEEEGG
T ss_pred Cce----EeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc---CCCCCceeEEECCCCCEEEEECC
Confidence 432 11112223567899999999877777778899999986554332211 23357899999999998888777
Q ss_pred CCCC
Q 023822 272 SPFS 275 (276)
Q Consensus 272 dg~v 275 (276)
++.|
T Consensus 254 ~~~v 257 (270)
T 1rwi_B 254 NDRV 257 (270)
T ss_dssp GTEE
T ss_pred CCEE
Confidence 7654
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.82 E-value=4e-17 Score=125.03 Aligned_cols=212 Identities=11% Similarity=0.067 Sum_probs=167.4
Q ss_pred CCCEEEEeecCCeEEEEEccCCeeeeeeeeee-eceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccC-c
Q 023822 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH-D 122 (276)
Q Consensus 45 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~-~ 122 (276)
.+++|++++.|+.|.+||.++|+.+..+..+. ..+.++.+.|+++.++ + . ++.|..||. +++.+..+..+. .
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s-~---~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-S-Y---SKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-E-C---BSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-e-C---CCCEEEECC-CCCEEEEEcCCCCc
Confidence 46789999999999999999999999888765 4688999999999888 3 3 788999999 899998887653 5
Q ss_pred ceEEEEeccCCCEEEEeeC-CCeEEEEeccCceeeeeEeec--------CCCeeEecCCCcEEEEee-CCeEEEEecccC
Q 023822 123 RVVSLSLCSSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQ--------GRPAAAYDDQGLVFAVAF-GGYIRMFDARKY 192 (276)
Q Consensus 123 ~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~ 192 (276)
.+.++.+.++|+++++.+. ++.|..+|. +++.+..+... ....+...+++.++++.. ++.|..||.. +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 7889999999999998887 788888885 56655555221 234567889999988877 7999999987 5
Q ss_pred CCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCC---CCCCceEEEEECCCCcEEEEe
Q 023822 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---VSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 193 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~~ 269 (276)
+. +...... ..+.++...++|+++++++.++.|..+|..+|+.+.++.... ..-..+..++..++|..+++.
T Consensus 156 ~~----~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 156 QL----LNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CE----EEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CE----EEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 53 3343332 356678889999999998888899999999999998886321 112347888999999988876
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.82 E-value=1.2e-18 Score=150.48 Aligned_cols=231 Identities=11% Similarity=0.020 Sum_probs=155.1
Q ss_pred cCCCcEEEEEEcCCCCEEE-----EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc----
Q 023822 32 DYNGRISSMDFHKSSSYLV-----TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES---- 102 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~-----~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~---- 102 (276)
+|...+..++|||||++|| .|+.+..|++||+.+++.+............++|+|+++.|+.++. +..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~---d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWL---PTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEEC---CCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEe---cCCCCCc
Confidence 4666799999999999998 4445578999999998865111111112268999999999999876 444
Q ss_pred ---------eEEEEccCCc----eeeeecccCcceEEEEeccCCCEEEEeeCCC----eEEEEeccCceeeeeE-eecCC
Q 023822 103 ---------LRLLSLHDNK----YLRYFKGHHDRVVSLSLCSSKDCFISGSLDR----TVLLWDQRAEKCQGLL-RVQGR 164 (276)
Q Consensus 103 ---------i~~~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~-~~~~~ 164 (276)
|++|++.++. .+.....+...+..+.|+|||++|+..+.++ .|++||..+++..... +....
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 274 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce
Confidence 9999998876 2333334556788999999999888877665 6777776555433333 22333
Q ss_pred CeeEecCCCcEEEEee----CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC-CCc
Q 023822 165 PAAAYDDQGLVFAVAF----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGT 239 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~~----d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~ 239 (276)
....+ +++.+++.+. ++.|.+||+.++................+..++|+ ++.++++...|+..+||.+. +++
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGK 352 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCC
Confidence 44445 5555555444 47899999977542111122211224457788888 67888888899988887654 466
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEEe
Q 023822 240 LLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 269 (276)
....+.. ...+.+..++++|+++.|+..
T Consensus 353 ~~~~l~~--~~~~~v~~~~~s~d~~~l~~~ 380 (695)
T 2bkl_A 353 PVRTVQL--PGVGAASNLMGLEDLDDAYYV 380 (695)
T ss_dssp EEEECCC--SSSSEECCCBSCTTCSEEEEE
T ss_pred eeEEecC--CCCeEEEEeecCCCCCEEEEE
Confidence 6665552 125678888999999776643
No 180
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=2.5e-19 Score=144.40 Aligned_cols=222 Identities=9% Similarity=-0.009 Sum_probs=148.5
Q ss_pred EEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEE-------------------EEEeccCCeEEEec--cC
Q 023822 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDL-------------------VCFTSHPTTVIYSS--KN 97 (276)
Q Consensus 39 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~~--~~ 97 (276)
.+.|+|||+.|+.++.++.|++||+.+++.......+...... +.|+|+++.++... ..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~ 164 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHT 164 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHT
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccC
Confidence 4889999999999999999999999888765554433221111 34566666655543 00
Q ss_pred CCCCceEEEEccCCceeeeecccCcceEEEEecc-CCCEEEEeeCC------CeEEEEeccCceeeeeEeec---CCCee
Q 023822 98 GWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLD------RTVLLWDQRAEKCQGLLRVQ---GRPAA 167 (276)
Q Consensus 98 ~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~---~~~~~ 167 (276)
..+..|.+||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+||+..++........ .+..+
T Consensus 165 ~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHE 243 (396)
T ss_dssp CCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEE
T ss_pred CCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccce
Confidence 12778999999988765444 4677789999999 78877766543 36888998765533322211 24467
Q ss_pred EecCCCcEEEEee-C-----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECC-CCcEEEEee---------------
Q 023822 168 AYDDQGLVFAVAF-G-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLTT--------------- 225 (276)
Q Consensus 168 ~~~~~~~~l~~~~-d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~--------------- 225 (276)
.|+|+++.|+... + +.|++||+.+++.. .+.... ... +.|+| +|+++++++
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~--~l~~~~----~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE--EVMVMP----PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE--EEEECC----SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCeE--EeeeCC----CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 9999998655543 2 34999999875421 111111 122 89999 999888754
Q ss_pred -cCCcEEEEECCCCcEEEEeecCCCCCC-----------ceEEEEECCCCcEEEEecCC
Q 023822 226 -MEGHIHVLDSFRGTLLSTYNVKPVSRN-----------STLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 226 -~dg~i~i~d~~~~~~~~~~~~~~~~~~-----------~v~~~~~s~~g~~l~~~~~d 272 (276)
.+..|++||+.+++... +.. +.. .+..++|+|||++|+.++.+
T Consensus 317 ~~~~~i~~~d~~~~~~~~-l~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSAQK-LCK---HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF 371 (396)
T ss_dssp CCCCEEEEEETTTTBCCE-EEE---CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CCCCcEEEEecccCceEE-ccC---CCCccccccccccCCCCCceEccCCCeEEEEecC
Confidence 34789999998877543 331 222 25668999999988877653
No 181
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.5e-18 Score=150.97 Aligned_cols=231 Identities=9% Similarity=0.052 Sum_probs=152.7
Q ss_pred eeeccCCCc-----EEEEEEcCCCCEEEEeecC---------CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEE
Q 023822 28 MSFRDYNGR-----ISSMDFHKSSSYLVTASDD---------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIY 93 (276)
Q Consensus 28 ~~~~~h~~~-----v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 93 (276)
..+.+|... ...++|||||++|+.++.+ +.+.+||+.+++.. .+..+...+...+|+|||+.|+.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~ 128 (740)
T 4a5s_A 50 VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAY 128 (740)
T ss_dssp EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEE
T ss_pred EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEE
Confidence 445555532 2347899999999998876 56779999998864 45566678999999999999999
Q ss_pred eccCCCCCceEEEEccCCceeee-ecccCcce-----------------EEEEeccCCCEEEEeeCCC------------
Q 023822 94 SSKNGWDESLRLLSLHDNKYLRY-FKGHHDRV-----------------VSLSLCSSKDCFISGSLDR------------ 143 (276)
Q Consensus 94 ~~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~i-----------------~~~~~~~~~~~l~~~~~d~------------ 143 (276)
+. ++.|++|++.+++..+. ..++...+ ..+.|+|||++|+.++.|.
T Consensus 129 ~~----~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~ 204 (740)
T 4a5s_A 129 VW----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYS 204 (740)
T ss_dssp EE----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECC
T ss_pred EE----CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeec
Confidence 86 88999999988775442 22222222 3589999999998875321
Q ss_pred ------------------------eEEEEeccC---cee--eeeE--------eecCCCeeEecCCCcEEEEee-----C
Q 023822 144 ------------------------TVLLWDQRA---EKC--QGLL--------RVQGRPAAAYDDQGLVFAVAF-----G 181 (276)
Q Consensus 144 ------------------------~i~iwd~~~---~~~--~~~~--------~~~~~~~~~~~~~~~~l~~~~-----d 181 (276)
+|++||+.+ ++. ...+ +...+..++|+|++++++... +
T Consensus 205 ~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~ 284 (740)
T 4a5s_A 205 DESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNY 284 (740)
T ss_dssp STTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTE
T ss_pred CCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCE
Confidence 588899988 631 1222 112255789999999666544 2
Q ss_pred CeEEEEecccCC----CCCeeeeeecCCCCCce-----EEEECCCCcEEE-Eeec-CC--cEEEEECCCCcEEEEeecCC
Q 023822 182 GYIRMFDARKYE----KGPFDIFSVGGDISDAN-----VVKFSNDGRLML-LTTM-EG--HIHVLDSFRGTLLSTYNVKP 248 (276)
Q Consensus 182 ~~i~~~d~~~~~----~~~~~~~~~~~~~~~i~-----~~~~~~~~~~l~-~~~~-dg--~i~i~d~~~~~~~~~~~~~~ 248 (276)
..|++||+.+++ ...........+...+. ..+|+|||+.|+ ..+. +| .|++||..+++......
T Consensus 285 ~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~--- 361 (740)
T 4a5s_A 285 SVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITK--- 361 (740)
T ss_dssp EEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCC---
T ss_pred EEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEeccc---
Confidence 479999998865 21111121133444443 789999999876 5553 33 58888987766543332
Q ss_pred CCCCceEEEEECCCCcEEEE
Q 023822 249 VSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 249 ~~~~~v~~~~~s~~g~~l~~ 268 (276)
....+..+.+ +|++.|+.
T Consensus 362 -g~~~v~~~~~-~d~~~i~f 379 (740)
T 4a5s_A 362 -GTWEVIGIEA-LTSDYLYY 379 (740)
T ss_dssp -SSSCEEEEEE-ECSSEEEE
T ss_pred -CCEEEEEEEE-EeCCEEEE
Confidence 3445555432 33554443
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=2.7e-17 Score=130.35 Aligned_cols=215 Identities=7% Similarity=0.031 Sum_probs=146.6
Q ss_pred CcEEEEEEcCCCCEEEEee---------cCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCC--CCCce
Q 023822 35 GRISSMDFHKSSSYLVTAS---------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESL 103 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i 103 (276)
..+..+++ ||+.++... .++.|.+||+.+++... + ..+..+.|+|+++.|+.+...+ ....|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 45677778 888887642 25689999998876533 3 4688899999999999887521 12348
Q ss_pred EEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCC---------------------------CeEEEEeccCceee
Q 023822 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD---------------------------RTVLLWDQRAEKCQ 156 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------~~i~iwd~~~~~~~ 156 (276)
.+|++.+++...... +.. +..++|+|+++.|+.++.+ ..|++||+.+++.+
T Consensus 88 ~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 88 WVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 888888877655444 334 8999999999988887642 57999999988763
Q ss_pred eeEeecCCCeeEecCCCcEEEEee-C------C-eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-
Q 023822 157 GLLRVQGRPAAAYDDQGLVFAVAF-G------G-YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME- 227 (276)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~~~-d------~-~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 227 (276)
..+....+..+.|+|++ +++++. + . ...+|.+.+++ ...+..+ ..+..+ +|+|++|+.++.+
T Consensus 166 ~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-----~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 166 EEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-----EEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-----EEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred eeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-----eEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 43422377789999999 666664 2 2 34555444322 1112122 334443 9999988877644
Q ss_pred -------CcEEEEECCCCcEEEEeecCCCCCCceEE-EEECCCCcEEEEecCCCC
Q 023822 228 -------GHIHVLDSFRGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 228 -------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~dg~ 274 (276)
..|.+|| +++...... .+...+.. +.|+ || ++++++.++.
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l~~---~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGILD---EVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEESST---TCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred cCCccccceEEEEC--CCceEeccc---cCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 3688888 555544333 45677886 9999 88 8888887764
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.80 E-value=3e-16 Score=122.55 Aligned_cols=232 Identities=10% Similarity=0.041 Sum_probs=158.6
Q ss_pred ccCCCcEEEEEEcCCCCEEEE-------eecCCeEEEEEccCCeeeeeee----eeeeceEEEEEecc-CCeEEEeccCC
Q 023822 31 RDYNGRISSMDFHKSSSYLVT-------ASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSH-PTTVIYSSKNG 98 (276)
Q Consensus 31 ~~h~~~v~~~~~~~~~~~l~~-------~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~~~ 98 (276)
...-....+++|+++++++++ +..++.|.+||..+++...... .+...+..+++.++ ++.++ +..
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~-- 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADM-- 90 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EET--
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EEC--
Confidence 333455689999999988887 6788999999988776543222 14457889999998 55444 443
Q ss_pred CCCceEEEEccCCceeee-ecc----cCcceEEEEeccCCCEEEEeeCC---------------CeEEEEeccCceeeee
Q 023822 99 WDESLRLLSLHDNKYLRY-FKG----HHDRVVSLSLCSSKDCFISGSLD---------------RTVLLWDQRAEKCQGL 158 (276)
Q Consensus 99 ~d~~i~~~d~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~~ 158 (276)
...|.+||.. ++.... ... ....+.+++++++++++++...+ +.|..||.. ++....
T Consensus 91 -~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 91 -RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp -TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred -CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 4579999988 664433 221 12357899999999877776654 578888766 443333
Q ss_pred E-eecCCCeeEec----CCCcEEEEe-e-CCeEEEEeccc-CCCCCe-eeeeecCCC-CCceEEEECCCCcEEEEeecCC
Q 023822 159 L-RVQGRPAAAYD----DQGLVFAVA-F-GGYIRMFDARK-YEKGPF-DIFSVGGDI-SDANVVKFSNDGRLMLLTTMEG 228 (276)
Q Consensus 159 ~-~~~~~~~~~~~----~~~~~l~~~-~-d~~i~~~d~~~-~~~~~~-~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg 228 (276)
. .......++++ |+++.+..+ . ++.|.+||... ++.... .......+. ..+..++++++|+++++...++
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 2 23345678899 998654444 3 78999999862 211111 112223332 4578899999999888777888
Q ss_pred cEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 229 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 229 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
.|.+||..+++.+..+. .+...+.+++|+|+|+.|+.++.
T Consensus 248 ~i~~~d~~~g~~~~~~~---~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIR---CPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp EEEEECTTCBSCSEEEE---CSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEcCCCCcEeEEEe---CCCCCceeEEECCCCCEEEEEeC
Confidence 99999988788777776 35578999999999996555443
No 184
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.79 E-value=1.1e-15 Score=118.57 Aligned_cols=231 Identities=11% Similarity=0.069 Sum_probs=155.2
Q ss_pred eccCCCcEEEEEEcCCC-CEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 30 FRDYNGRISSMDFHKSS-SYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
+..+..--.+..|++++ .++++...++.|..||..+++. ..+. ....+.++++.++++.+ ++. +..|.+||.
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~-v~~----~~~l~~~d~ 80 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYV-ATI----GTKFCALNW 80 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEE-EEE----TTEEEEEET
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEE-EEE----CCeEEEEEC
Confidence 33444556789999954 4556666788999999987764 2232 34578999999999944 444 568999999
Q ss_pred cCCceeeeecc----cCcceEEEEeccCCCEEEEeeC-----------CCeEEEEeccCceeeeeE-eecCCCeeEecCC
Q 023822 109 HDNKYLRYFKG----HHDRVVSLSLCSSKDCFISGSL-----------DRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQ 172 (276)
Q Consensus 109 ~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~-----------d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 172 (276)
.+++....... ....+..++++|+|+++++... .+.|..+|.. ++..... .......++|+|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTT
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCC
Confidence 87764332221 1245789999999996665432 2344444443 2322222 3334568999999
Q ss_pred CcEEEEee--CCeEEEEecc--cCCCCCee-eeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC
Q 023822 173 GLVFAVAF--GGYIRMFDAR--KYEKGPFD-IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (276)
Q Consensus 173 ~~~l~~~~--d~~i~~~d~~--~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (276)
++.+..+. ++.|.+||+. ++...... ...+......+..++++++|++.++...++.|..||..+++.+..+.
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~-- 237 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK-- 237 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE--
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE--
Confidence 97665444 6899999974 32211011 12222333467889999999877777778889999998899998887
Q ss_pred CCCCCceEEEEEC-CCCcEEEEecC
Q 023822 248 PVSRNSTLEASFS-PEGMFVISGRV 271 (276)
Q Consensus 248 ~~~~~~v~~~~~s-~~g~~l~~~~~ 271 (276)
.+...+++++|. |+++.|+.++.
T Consensus 238 -~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 238 -LPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -CSSSBEEEEEEESGGGCEEEEEEB
T ss_pred -CCCCCceEEEEeCCCCCEEEEEcC
Confidence 455789999998 88877655544
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.79 E-value=2e-17 Score=130.37 Aligned_cols=227 Identities=11% Similarity=0.145 Sum_probs=160.6
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
..|.+++|++++..++..+.++.++.| .++....+..+...+.+++|+++++.++++.. ++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~---~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVF---EGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETT---TCEEEEECTTTCCEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECC---CCEEEEEeCCCCcEE
Confidence 457788999988888777788899999 35556666666667889999999997767766 889999999888765
Q ss_pred eeecccCcceEEEEeccCCCEEEEeeCC----CeEEEEeccCceeeeeEe----ecCCCeeEecCCCcEEEEeeC-----
Q 023822 115 RYFKGHHDRVVSLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLR----VQGRPAAAYDDQGLVFAVAFG----- 181 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~d----- 181 (276)
.....+...+.+++++|+++++++...+ +.|.+||.++++....+. ...+..++++|+++++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 5444566789999999999987777666 689999988776543331 223567899999998887763
Q ss_pred --CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEe-ecCCcEEEEECCC-CcEEEEe-----ecCCCCCC
Q 023822 182 --GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFR-GTLLSTY-----NVKPVSRN 252 (276)
Q Consensus 182 --~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~-~~~~~~~-----~~~~~~~~ 252 (276)
+.|..+|..+.+. .. +......+..++|+|+|+.|+.+ +.++.|.+||..+ ++.+..+ ....+ ..
T Consensus 160 ~~~~l~~~~~~~~~~---~~--~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~ 233 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTV---TP--IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HE 233 (333)
T ss_dssp CCEEEEEECTTSCCE---EE--EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SS
T ss_pred CCceEEEEeCCCCEE---EE--eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CC
Confidence 4566666554221 11 11222357889999999866544 5678999999864 4333221 11111 24
Q ss_pred ceEEEEECCCCcEEEEecCCC
Q 023822 253 STLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 253 ~v~~~~~s~~g~~l~~~~~dg 273 (276)
.+..++++++|+++++...++
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~ 254 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQG 254 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTT
T ss_pred CCCceEECCCCCEEEEEcCCC
Confidence 678899999999877765544
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=7.2e-16 Score=121.26 Aligned_cols=222 Identities=10% Similarity=0.087 Sum_probs=156.8
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEec-cCCCCCceEEEEccCCce
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS-KNGWDESLRLLSLHDNKY 113 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~d~~i~~~d~~~~~~ 113 (276)
.....+.+. +++.+++...++.|.+||..+++.+.++.. ......+++++++ .++++. . ++.|.+||..+++.
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~---~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIW---DYRIFIINPKTYEI 117 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBS---CSEEEEEETTTTEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECC---CCeEEEEECCCCeE
Confidence 345677775 345556666679999999999999888853 3568899999888 555555 5 89999999999987
Q ss_pred eeeecccC-----cceEEEEeccCCCEEEEee-CCCeEEEEeccCceeeeeEee-cCCCeeEecCCCcEEEEee-C----
Q 023822 114 LRYFKGHH-----DRVVSLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLRV-QGRPAAAYDDQGLVFAVAF-G---- 181 (276)
Q Consensus 114 ~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-d---- 181 (276)
...+.... .....+++ .+++.+++.. .++.|.++|+.+++....+.. .....+.++|++++++++. +
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCC
Confidence 77665332 14566777 3444444433 488999999999988877743 3456899999999888876 3
Q ss_pred ------CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE
Q 023822 182 ------GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL 255 (276)
Q Consensus 182 ------~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 255 (276)
+.|.++|..+.+. ....... ....+..++|+|+++.|+++.. .|.+||..+++....... ........
T Consensus 197 ~~~~~~~~v~~id~~t~~v--~~~~~~~-~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~-~~~~~~p~ 270 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTV--EKQFKFK-LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFL-EFRDTKYY 270 (328)
T ss_dssp SSCBCCCEEEEEETTTTEE--EEEEECC-TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSB-CCCSSCEE
T ss_pred ccccCCceEEEEECCCCeE--EEEEecC-CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeee-cCCCCceE
Confidence 6899999887542 1112221 1236889999999998888765 899999988876422111 01246788
Q ss_pred EEEECCC-CcEEEEe
Q 023822 256 EASFSPE-GMFVISG 269 (276)
Q Consensus 256 ~~~~s~~-g~~l~~~ 269 (276)
.++++|+ ++++++.
T Consensus 271 gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 271 GLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEECTTTCCEEEEE
T ss_pred EEEEcCCCCeEEEEc
Confidence 9999995 5555554
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=4.9e-16 Score=119.78 Aligned_cols=196 Identities=10% Similarity=0.126 Sum_probs=140.9
Q ss_pred CCCcEEEEEE-cCCCCEEEEeec-CCeEEEEEccCCeeeeeeee-eeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc
Q 023822 33 YNGRISSMDF-HKSSSYLVTASD-DESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 33 h~~~v~~~~~-~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
|...+..+++ .++++++++... ++.|++|| .+++.+..+.. +...+..+++.++++.+++... ++.|.+||..
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~ 150 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK---VMRVIIFDQN 150 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT---TTEEEEECTT
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECC---CCEEEEEcCC
Confidence 4467889999 467776666543 78999999 56776665542 3346889999999987666655 7899999964
Q ss_pred CCceeeeec--ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee----cCCCeeEecCCCcEEEEee-CC
Q 023822 110 DNKYLRYFK--GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----QGRPAAAYDDQGLVFAVAF-GG 182 (276)
Q Consensus 110 ~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~-d~ 182 (276)
++.+..+. .+...+..++++++++++++...++.|++||... +.+..+.. ..+..++++++++++++.. ++
T Consensus 151 -g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 151 -GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp -SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred -CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 55555553 3445689999999999888878899999999754 44444422 3355799999999888887 54
Q ss_pred -eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC
Q 023822 183 -YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (276)
Q Consensus 183 -~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 238 (276)
.|.+||... + ....+........+..++++|+|+++++ +.++.|++|+....
T Consensus 229 ~~i~~~~~~g-~--~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 229 FNLTIFTQDG-Q--LISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CEEEEECTTS-C--EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEEEECCCC-C--EEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 999999643 2 1222222222334678999999986666 67999999997653
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.76 E-value=8.5e-15 Score=113.30 Aligned_cols=231 Identities=6% Similarity=0.018 Sum_probs=162.8
Q ss_pred eccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeee-eeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 30 FRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 30 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
+..+...+.++++.++|+++++...++.|.+||.. ++..... ......+..+++.+++...++... ++.|..||.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECC
Confidence 34456789999999999987776667899999987 5433221 223456889999999987777665 788999997
Q ss_pred cCCcee-eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-e--ecCCCeeEecCCCcEEEEee-CCe
Q 023822 109 HDNKYL-RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-R--VQGRPAAAYDDQGLVFAVAF-GGY 183 (276)
Q Consensus 109 ~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~--~~~~~~~~~~~~~~~l~~~~-d~~ 183 (276)
. ++.. ..+......+..+++.++++++++...++.|..||. +++..... . ...+..++++++++++++.. ++.
T Consensus 86 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 86 K-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred C-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence 6 3321 122224457889999999988887777889999998 44433222 1 23356789999998888776 689
Q ss_pred EEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCC
Q 023822 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 263 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 263 (276)
|..||. +++ ............+..++++++|+++++...++.|.+||. +++... +... .....+.+++++++|
T Consensus 164 i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 164 IGRITE-SGD---ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIP-TPNARPHAITAGAGI 236 (299)
T ss_dssp EEEECT-TCC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECS-STTCCEEEEEECSTT
T ss_pred EEEEcC-CCc---EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECC-CCCCCceeEEECCCC
Confidence 999998 433 122223334456789999999997776667889999998 666443 3221 245678999999999
Q ss_pred cEEEEecCCC
Q 023822 264 MFVISGRVSP 273 (276)
Q Consensus 264 ~~l~~~~~dg 273 (276)
++.++...++
T Consensus 237 ~l~v~~~~~~ 246 (299)
T 2z2n_A 237 DLWFTEWGAN 246 (299)
T ss_dssp CEEEEETTTT
T ss_pred CEEEeccCCc
Confidence 8776654443
No 189
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=4.8e-16 Score=135.21 Aligned_cols=228 Identities=14% Similarity=0.045 Sum_probs=149.4
Q ss_pred CCCcEEEEEEcCCCCEEEEeecC-----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCC--------
Q 023822 33 YNGRISSMDFHKSSSYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-------- 99 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------- 99 (276)
|...+..++|||||++||.++.+ ..|++||+.+++.+.. ..+...+..++|+|+ +.|+.+.....
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44578899999999999877654 4699999999887543 222333468999999 99888876211
Q ss_pred ---CCceEEEEccCCce--eeee--cccCcceEEEEeccCCCEEEEeeCCC-----eEEEEeccCc--eeeeeE--eecC
Q 023822 100 ---DESLRLLSLHDNKY--LRYF--KGHHDRVVSLSLCSSKDCFISGSLDR-----TVLLWDQRAE--KCQGLL--RVQG 163 (276)
Q Consensus 100 ---d~~i~~~d~~~~~~--~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~--~~~~~~--~~~~ 163 (276)
...|++|++.++.. ...+ ..+...+..+.|+|||++|+..+.++ .|++||+.++ +....+ +...
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 22489999877652 2222 23334588999999999888777543 8999999876 312333 2222
Q ss_pred CCeeEecCCCcEEEEee-----CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC-C
Q 023822 164 RPAAAYDDQGLVFAVAF-----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-R 237 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~ 237 (276)
.... ++|++..|+..+ ++.|.+||+.+.. ... ......+...+..++++ ++.++++...|+..+||.+. +
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~-~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRF-DTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEE-EEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETT
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-ccc-EEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 2223 347776555554 2569999987642 111 12223344456677777 56777888889887776544 4
Q ss_pred CcEEEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 238 GTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
++....+.. ...+.+..++++|+++.|+.
T Consensus 395 g~~~~~l~~--~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 395 GKPAGAVSL--PGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp SCEEEECBC--SSSCEEEEEECCBTCSCEEE
T ss_pred CCceeeccC--CCCeEEEEeecCCCCCEEEE
Confidence 666666552 13577889999999876653
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=1.8e-15 Score=119.03 Aligned_cols=223 Identities=8% Similarity=-0.026 Sum_probs=157.7
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeee-----eceEEEEEeccCCeEEEeccCC
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKK-----YGVDLVCFTSHPTTVIYSSKNG 98 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~ 98 (276)
.+...++.. ......++++++++.+++...++.|.+||..+++....+.... .....+++ ++..++++.. +
T Consensus 74 ~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~-~ 149 (328)
T 3dsm_A 74 FKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCW-S 149 (328)
T ss_dssp CCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEEC-T
T ss_pred cEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcC-C
Confidence 344444533 4567899999988544444478999999999998877765433 14556777 4566666642 1
Q ss_pred CCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCC----------CeEEEEeccCceeeeeEee---cCCC
Q 023822 99 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD----------RTVLLWDQRAEKCQGLLRV---QGRP 165 (276)
Q Consensus 99 ~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~~~~~~~~~~---~~~~ 165 (276)
.++.|.++|+.+++....+... .....++++|++++++++..+ +.|.++|..+.+....+.. ....
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~ 228 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPS 228 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCE
T ss_pred CCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCce
Confidence 1789999999999888777643 345788999999977776654 7899999999887776643 2467
Q ss_pred eeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECC-CCcEEEEe----ecCCcEEEEECCCCcE
Q 023822 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN-DGRLMLLT----TMEGHIHVLDSFRGTL 240 (276)
Q Consensus 166 ~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~----~~dg~i~i~d~~~~~~ 240 (276)
.++++|+++.+.++.. .|.+||..+.+...... .......+..++++| +++++++. ..++.|.+||.. ++.
T Consensus 229 ~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~--~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 229 EVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPF--LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp EEEECTTSCEEEEESS-SEEEEETTCSSCCSSCS--BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCE
T ss_pred eEEEecCCCEEEEEcc-EEEEEECCCCceeeeee--ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCE
Confidence 8999999887777655 89999998765421111 111235678899999 55555555 568899999987 999
Q ss_pred EEEeecCCCCCCceEEEEE
Q 023822 241 LSTYNVKPVSRNSTLEASF 259 (276)
Q Consensus 241 ~~~~~~~~~~~~~v~~~~~ 259 (276)
+..+.. ......++|
T Consensus 305 ~~~i~~----G~~P~~~~~ 319 (328)
T 3dsm_A 305 IDEFYV----GIIPGAFCW 319 (328)
T ss_dssp EEEEEE----EESEEEEEE
T ss_pred EEEEEe----ccCcceEEE
Confidence 988872 344455655
No 191
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.75 E-value=7.7e-15 Score=118.66 Aligned_cols=231 Identities=11% Similarity=0.080 Sum_probs=159.0
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCC--ceEEEEccCCc
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE--SLRLLSLHDNK 112 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~--~i~~~d~~~~~ 112 (276)
.....|+|+++++++++...++.|++||.++++......... ... ++|+++++.++++.. ++ .|.+++...+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~---~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGW---EGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBS---STTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEec---CCCceEEEEEcCCCc
Confidence 467899999999977777778999999998877665554433 334 999999999888876 44 78889887665
Q ss_pred eeeee----cccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeee----E-eecC-C-C-eeEecCC-CcEEEEe
Q 023822 113 YLRYF----KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL----L-RVQG-R-P-AAAYDDQ-GLVFAVA 179 (276)
Q Consensus 113 ~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~-~~~~-~-~-~~~~~~~-~~~l~~~ 179 (276)
....+ ......+.+++++|++..|+.+..++.|+.||..++..... . .... . . .++++|+ +.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 44343 22445678899999555555577789999999987653322 1 1111 1 2 8999995 6666655
Q ss_pred e-CCeEEEEecccCCCCCeeeeeec-------------CCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEe
Q 023822 180 F-GGYIRMFDARKYEKGPFDIFSVG-------------GDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 180 ~-d~~i~~~d~~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~ 244 (276)
. ++.|+.|+.... .....-. ..-.....++++|+|+++++-. .++.|+.|++.+++.....
T Consensus 286 ~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 286 QNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp TTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 5 789999987642 1111100 0123478899999999777777 7889999998787654333
Q ss_pred ecCC-----------CCCCceEEEEECCCCcEEEEecCCCC
Q 023822 245 NVKP-----------VSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 245 ~~~~-----------~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.... ..-.....++++++|.++++-..++.
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~ 402 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKA 402 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCE
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCe
Confidence 2100 01246889999999888777666543
No 192
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.75 E-value=1.1e-14 Score=116.19 Aligned_cols=239 Identities=10% Similarity=-0.005 Sum_probs=160.6
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEee----------cCCeEEEEEccCCeeeeeeeee-------eeceEEEEEec
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTS 86 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~ 86 (276)
.+...++.....+ .++++||+++|+++. .++.|.+||..+.+.+..+... ......+.|+|
T Consensus 57 ~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 57 GSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred CeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence 3344455544444 899999999998885 3678999999988887776542 12345899999
Q ss_pred cCCeEEEeccCCCCCceEEEEccCCceeee-ecccCcceEEEEeccCC-CEEEEeeCCCeEEEEeccCceeeeeEe----
Q 023822 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRY-FKGHHDRVVSLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLR---- 160 (276)
Q Consensus 87 ~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~---- 160 (276)
++++++++.... ++.|.++| .+++.+.. +.. .. ++.+.|++ +.+++.+.||++.++|. +++......
T Consensus 135 DG~~l~v~n~~~-~~~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~ 207 (373)
T 2mad_H 135 NNADLLFFQFAA-GPAVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAM 207 (373)
T ss_pred CCCEEEEEecCC-CCeEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccc
Confidence 999999987421 47899999 99988777 542 22 24455655 45677778999999999 776653322
Q ss_pred -ecCC---CeeEecCC-CcEEEEeeCCeEEEEecccCCCCCeeeeeecC--------CCCCceEEEECCCCcEEEEeec-
Q 023822 161 -VQGR---PAAAYDDQ-GLVFAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLLTTM- 226 (276)
Q Consensus 161 -~~~~---~~~~~~~~-~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~- 226 (276)
.... ....+.++ +.++..+.++.+.+.|+..........+.... .......++++|+++.++++..
T Consensus 208 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~ 287 (373)
T 2mad_H 208 LTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE 287 (373)
T ss_pred ccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEecc
Confidence 1111 12234444 34555556789999998754321111111110 1122344789999988877643
Q ss_pred ---------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc-EEEEec-CCCCC
Q 023822 227 ---------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGR-VSPFS 275 (276)
Q Consensus 227 ---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~-~dg~v 275 (276)
++.|.++|+.+++.+..+. .......++|+|||+ +++++. .++.|
T Consensus 288 ~~~~~~~~~~~~V~VID~~t~~vv~~i~----~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 288 QSAWKLHAAAKEVTSVTGLVGQTSSQIS----LGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred CCcccccCCCCeEEEEECCCCEEEEEEE----CCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 3579999999999999987 344688999999999 777776 36654
No 193
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.74 E-value=4.6e-14 Score=110.87 Aligned_cols=223 Identities=12% Similarity=0.048 Sum_probs=150.7
Q ss_pred cEEEEEEcCCCC-EEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 36 RISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 36 ~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
-..+++|+|++. ++++...++.|..||..+++.. .+. ....+.++.+.++++.++.. . + .|.+||..+++..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~---~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D---D-GLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T---T-EEEEEETTTCCEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C---C-CEEEEECCCCcEE
Confidence 456889999754 5566667889999999877643 232 23578999999998876654 2 4 4999999887754
Q ss_pred eeecc----cCcceEEEEeccCCCEEEEeeC------CCeEEEEeccCceeeeeE-eecCCCeeEecCCCcEEEEee--C
Q 023822 115 RYFKG----HHDRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVFAVAF--G 181 (276)
Q Consensus 115 ~~~~~----~~~~i~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--d 181 (276)
..... ....+.+++++|+|+++++... .+.|..+| +++..... .......++|+|+++.+..+. +
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 32221 1246889999999997665442 24566666 44433322 223445789999997665544 6
Q ss_pred CeEEEEecc--cC-CCCCee-eeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEE
Q 023822 182 GYIRMFDAR--KY-EKGPFD-IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 257 (276)
Q Consensus 182 ~~i~~~d~~--~~-~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~ 257 (276)
+.|.+||+. ++ ...... ..........+..++++++|+++++...++.|.+||. +++.+..+. .+...+.++
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~---~~~~~~~~~ 276 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE---VPGKQTTCP 276 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE---CSCSBEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE---CCCCCcEEE
Confidence 899999986 43 221111 2222223345678999999987777666788999997 677777776 355679999
Q ss_pred EEC-CCCcEEEEecC
Q 023822 258 SFS-PEGMFVISGRV 271 (276)
Q Consensus 258 ~~s-~~g~~l~~~~~ 271 (276)
+|+ ++++.|+.++.
T Consensus 277 af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 277 AFIGPDASRLLVTSA 291 (326)
T ss_dssp EEESTTSCEEEEEEB
T ss_pred EEecCCCCEEEEEec
Confidence 998 89877655443
No 194
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=5e-16 Score=122.25 Aligned_cols=196 Identities=11% Similarity=0.070 Sum_probs=144.0
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe-eeeeee---------eeeeceEEEEEec-cCCeEEEec-cCCC
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-CLKTIN---------SKKYGVDLVCFTS-HPTTVIYSS-KNGW 99 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~~~~ 99 (276)
++......++++|+|+++++...++.|++||..... .+..+. .+-.....++++| ++..+++.+ .
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~--- 164 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC--- 164 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---
Confidence 344678899999999988888889999999975432 444442 2334688999999 676666664 4
Q ss_pred CCceEEEEccCCceeeeecc----------cCcceEEEEeccC-CCEEEEeeCCCeEEEEeccCceeeeeEee----cCC
Q 023822 100 DESLRLLSLHDNKYLRYFKG----------HHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV----QGR 164 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~ 164 (276)
++.|++|+ .+++.+..+.. +-.....++++|+ ++++++...+++|++||..+++.+..+.. ..+
T Consensus 165 ~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 165 NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 88999999 56666666532 2234789999998 77777777889999999998887777632 234
Q ss_pred CeeEecCCCcEEEEee--------CCeEEEEecccCCCCCeeeeee---cCCCCCceEEEECCCCcEEEEeecCCcEEEE
Q 023822 165 PAAAYDDQGLVFAVAF--------GGYIRMFDARKYEKGPFDIFSV---GGDISDANVVKFSNDGRLMLLTTMEGHIHVL 233 (276)
Q Consensus 165 ~~~~~~~~~~~l~~~~--------d~~i~~~d~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 233 (276)
..++++| +.+++... +..|++||..+++. +..+ ..+...+..++++|+|.++++...++.|++|
T Consensus 244 ~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~----~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 244 FAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI----IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp EEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCE----EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred ceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeE----EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence 5778888 44443332 35899999887653 2232 3455678999999999888888889999999
Q ss_pred ECC
Q 023822 234 DSF 236 (276)
Q Consensus 234 d~~ 236 (276)
++.
T Consensus 319 ~~~ 321 (329)
T 3fvz_A 319 TLT 321 (329)
T ss_dssp EEE
T ss_pred eCC
Confidence 975
No 195
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.74 E-value=9.2e-16 Score=121.29 Aligned_cols=243 Identities=12% Similarity=0.051 Sum_probs=165.6
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEee----------cCCeEEEEEccCCeeeeeeeeee-------eceEEEEEe
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSKK-------YGVDLVCFT 85 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~~ 85 (276)
+.+.+.++.....+ . ++++|||++|+++. .++.|.+||..+++.+.++.... .....+.++
T Consensus 68 t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~s 145 (386)
T 3sjl_D 68 AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLT 145 (386)
T ss_dssp TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEEC
T ss_pred CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEc
Confidence 34555555544555 4 99999999988775 36789999999999888875432 245679999
Q ss_pred ccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccC-ceeeeeE----e
Q 023822 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLL----R 160 (276)
Q Consensus 86 ~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~----~ 160 (276)
|++++++++... .++.|.++|+.+++.+.++... +. ...+....+.+++.+.||++.+.++.. ++..... .
T Consensus 146 pDGk~lyVan~~-~~~~VsVID~~t~~vv~tI~v~-g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~ 221 (386)
T 3sjl_D 146 PDGKTLLFYQFS-PAPAVGVVDLEGKAFKRMLDVP-DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 221 (386)
T ss_dssp TTSSEEEEEECS-SSCEEEEEETTTTEEEEEEECC-SE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS
T ss_pred CCCCEEEEEEcC-CCCeEEEEECCCCcEEEEEECC-Cc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceec
Confidence 999999988641 1689999999999998887532 21 222333445677888899988888876 4432211 1
Q ss_pred ec--CC-CeeEe-cCCCcEEEEeeCCeEEEEecccCCCCCeeeeee--------cCCCCCceEEEECCCCcEEEEeec--
Q 023822 161 VQ--GR-PAAAY-DDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV--------GGDISDANVVKFSNDGRLMLLTTM-- 226 (276)
Q Consensus 161 ~~--~~-~~~~~-~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~~-- 226 (276)
.. .+ ....| .++|+++..+.++.+++.|.............+ .-.......++++|+++.++....
T Consensus 222 ~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 222 PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred cccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 00 01 12345 478888888889999999997644211111110 011234456888999988887643
Q ss_pred --------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc-EEEEe-cCCCCC
Q 023822 227 --------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISG-RVSPFS 275 (276)
Q Consensus 227 --------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~-~~dg~v 275 (276)
.+.|.++|+.+++.+..+. ....+.++++++|++ +|+++ ..++.|
T Consensus 302 ~~~~hk~~~~~V~viD~~t~kv~~~i~----vg~~~~~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 302 DEWRHKTASRFVVVLDAKTGERLAKFE----MGHEIDSINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEE----EEEEECEEEECSSSSCEEEEEETTTTEE
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEE----CCCCcceEEECCCCCeEEEEEcCCCCeE
Confidence 2579999999999999998 345788999999997 66664 446654
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=1.2e-14 Score=121.66 Aligned_cols=237 Identities=10% Similarity=0.064 Sum_probs=164.9
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEcc--CCeeeeeeeeeeeceEEEEEe----ccCCeEEEeccCC
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFT----SHPTTVIYSSKNG 98 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~~~ 98 (276)
+.+.++.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+.++.... ....++|+ |++++++++...
T Consensus 188 ~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~- 264 (567)
T 1qks_A 188 EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYW- 264 (567)
T ss_dssp CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEE-
T ss_pred eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEcc-
Confidence 34444443 2356789999999999999999999999995 778887776544 46789999 699999998873
Q ss_pred CCCceEEEEccCCceeeeecc----------cCc-ceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE--e-ecC
Q 023822 99 WDESLRLLSLHDNKYLRYFKG----------HHD-RVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL--R-VQG 163 (276)
Q Consensus 99 ~d~~i~~~d~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~-~~~ 163 (276)
++.+.++|..+.+.+..+.. |.. .+..+..++++. +++....+|.|.++|....+..... . ...
T Consensus 265 -~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~ 343 (567)
T 1qks_A 265 -PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF 343 (567)
T ss_dssp -TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSS
T ss_pred -CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecccc
Confidence 79999999999988876642 212 577888888766 4555566799999998875433222 1 122
Q ss_pred CCeeEecCCCcEEEEee--CCeEEEEecccCCCCCeeeeee-cCCCCCceEEE-ECCCCcEE-EEee-cCCcEEEEECCC
Q 023822 164 RPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSV-GGDISDANVVK-FSNDGRLM-LLTT-MEGHIHVLDSFR 237 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~~~l-~~~~-~dg~i~i~d~~~ 237 (276)
...+.|+|+++++.++. ++.|.++|+.+++. ...... .....+-..+. ++|++..+ +++. .++.|.++|..+
T Consensus 344 ~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl--~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 344 LHDGGLDGSHRYFITAANARNKLVVIDTKEGKL--VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred ccCceECCCCCEEEEEeCCCCeEEEEECCCCcE--EEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 33678999998876665 79999999998653 112222 11111212233 57875444 4443 468999999987
Q ss_pred -------CcEEEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 238 -------GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 238 -------~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
.+.++++.. ....-..+..+|++++|.+..
T Consensus 422 ~~~~~~~~kvv~~i~~---~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 422 EGHPDNAWKILDSFPA---LGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp TTCTTTBTSEEEEEEC---SCSCCCCEECCTTCSEEEEEC
T ss_pred CCCccccCEEEEEEec---CCCCCEEEEeCCCCCeEEEec
Confidence 667787773 223334477899999988755
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=2.8e-14 Score=110.39 Aligned_cols=227 Identities=9% Similarity=0.089 Sum_probs=160.5
Q ss_pred CCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee--eeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC
Q 023822 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~ 110 (276)
+...+.++++.+++.++++...++.|..||.. ++. ..+. .....+..+++.+++..+++... ++.|..||. +
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~-~ 128 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITD-D 128 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECT-T
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECC-C
Confidence 45678999999999888877778899999976 332 2222 23446889999998887776655 788999998 5
Q ss_pred Cceeee-ecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeee-E--eecCCCeeEecCCCcEEEEee-CCeEE
Q 023822 111 NKYLRY-FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-L--RVQGRPAAAYDDQGLVFAVAF-GGYIR 185 (276)
Q Consensus 111 ~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~-d~~i~ 185 (276)
++.... .......+..+++.++++++++...++.|..||. +++.... . ....+..+++++++.++++.. ++.|.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 544332 2334456899999999988777777789999998 5554332 1 122345789999998877775 78999
Q ss_pred EEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcE
Q 023822 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265 (276)
Q Consensus 186 ~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 265 (276)
+||. +++ ............+..++++++|+++++...++.|..||. +++ +..+... .+...+.++++ ++|++
T Consensus 208 ~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~-~~~~~~~~i~~-~~g~l 279 (299)
T 2z2n_A 208 RITT-SGE---ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQ-IKSAEPHGICF-DGETI 279 (299)
T ss_dssp EECT-TCC---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECS-SSSCCEEEEEE-CSSCE
T ss_pred EECC-CCc---EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCC-CCCCccceEEe-cCCCE
Confidence 9998 433 222333334567889999999996666657789999998 554 3344321 24567899999 99988
Q ss_pred EEEecCCCC
Q 023822 266 VISGRVSPF 274 (276)
Q Consensus 266 l~~~~~dg~ 274 (276)
.++...++.
T Consensus 280 ~v~~~~~~l 288 (299)
T 2z2n_A 280 WFAMECDKI 288 (299)
T ss_dssp EEEETTTEE
T ss_pred EEEecCCcE
Confidence 777655543
No 198
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.74 E-value=7.7e-15 Score=114.23 Aligned_cols=235 Identities=9% Similarity=0.015 Sum_probs=158.5
Q ss_pred cceeeccCCCcEEEEEEcCCCC-EEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 26 VGMSFRDYNGRISSMDFHKSSS-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 26 ~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
....+..+........|+|+++ ++++...++.|..|+. +++ ...+..+...+..+++.++++.+++... ++.|.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~---~~~v~ 110 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHG---RRAIT 110 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETT---TTEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECC---CCEEE
Confidence 3444555566778999999998 5667777899999997 454 3445555667899999999986655544 67899
Q ss_pred EEEccCCceeeeeccc----CcceEEEEeccCCCEEEE----eeC-------------CCeEEEEeccCceeeeeEeecC
Q 023822 105 LLSLHDNKYLRYFKGH----HDRVVSLSLCSSKDCFIS----GSL-------------DRTVLLWDQRAEKCQGLLRVQG 163 (276)
Q Consensus 105 ~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~ 163 (276)
.|+.. ++........ ...+..+++.|+|+++++ +.. .+.|..||..+++.........
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~ 189 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDH 189 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESS
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCC
Confidence 99976 5432221111 134678999999998876 332 2568888876665433323344
Q ss_pred CCeeEecCCCcEEEEee-C------CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 164 RPAAAYDDQGLVFAVAF-G------GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 164 ~~~~~~~~~~~~l~~~~-d------~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
...++|+|+++.|..+. . +.|.+|++..........+ .......+..++++++|++. ++..+ .|.+|+.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~-~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~- 265 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF-ASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS- 265 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE-ECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE-EECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-
Confidence 55789999998665554 3 6899999875321000111 11123446779999999944 44444 4999997
Q ss_pred CCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 237 RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
+++.+..+.. .. .+.+++|+|+++.|+.++.++.
T Consensus 266 ~g~~~~~~~~---~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 266 DGQLLGHIPT---PG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp TSCEEEEEEC---SS-CCCEEEECTTSCEEEEEETTEE
T ss_pred CCCEEEEEEC---CC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 6788877772 33 5889999999988888777654
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.73 E-value=1e-14 Score=122.14 Aligned_cols=223 Identities=12% Similarity=0.098 Sum_probs=158.1
Q ss_pred CCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc--CCceeeeecccC
Q 023822 44 KSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYLRYFKGHH 121 (276)
Q Consensus 44 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~--~~~~~~~~~~~~ 121 (276)
+.+.++++...++.|.++|..+++.+.++.... .+..+.|+|+++++++++. ++.|.+||+. +++.+..+....
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~v~~i~~G~ 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKIGS 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEECCS
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcC---CCeEEEEECCCCCCcEeEEEecCC
Confidence 444566777788999999999999988886543 5678999999999999887 8999999996 777777776433
Q ss_pred cceEEEEec----cCCCEEEEeeC-CCeEEEEeccCceeeeeEeec-------------CCCeeEecCCCcEEEEee--C
Q 023822 122 DRVVSLSLC----SSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQ-------------GRPAAAYDDQGLVFAVAF--G 181 (276)
Q Consensus 122 ~~i~~~~~~----~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~--d 181 (276)
....++|+ |+|++++++.. +++|.++|..+.+.+..+... .+..+..++++..++... +
T Consensus 241 -~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 241 -EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp -EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred -CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 45789999 69998777665 589999999998888776321 223566777765555554 6
Q ss_pred CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeec-C-CCCCCceEEEE
Q 023822 182 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNV-K-PVSRNSTLEAS 258 (276)
Q Consensus 182 ~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~-~~~~~~v~~~~ 258 (276)
|.|.++|....+. .....+. .......+.|+|+|++++++. .++.|.++|+.+++.+..+.. . ..|.+.-..+
T Consensus 320 g~v~~vd~~~~~~--~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~- 395 (567)
T 1qks_A 320 GKILLVDYTDLNN--LKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF- 395 (567)
T ss_dssp TEEEEEETTCSSE--EEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-
T ss_pred CeEEEEecCCCcc--ceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-
Confidence 9999999876432 1122221 223466789999999987765 578999999999998877763 1 1132222122
Q ss_pred ECCCCcE-EEEec-CCCCC
Q 023822 259 FSPEGMF-VISGR-VSPFS 275 (276)
Q Consensus 259 ~s~~g~~-l~~~~-~dg~v 275 (276)
++|++.. .+++. .++.|
T Consensus 396 ~~p~~g~v~~t~~~g~~~V 414 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSV 414 (567)
T ss_dssp EETTTEEEEEEEBSSSSEE
T ss_pred ECCCCCcEEEeCCCCCCeE
Confidence 5787544 44432 33444
No 200
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=9.6e-15 Score=113.15 Aligned_cols=187 Identities=10% Similarity=0.047 Sum_probs=135.3
Q ss_pred eeeeeeeeeceEEEEEeccCC-eEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEE
Q 023822 69 LKTINSKKYGVDLVCFTSHPT-TVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147 (276)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 147 (276)
+..+..+.....+++|+|+++ .+++... ++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~---~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVR---QNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGG---GTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCC---CCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 334444445677899999998 5566665 899999999877 5666667778999999999998877777789999
Q ss_pred EeccCceeeeeEe------ecCCCeeEecCCCcEEEEe----e--------------CCeEEEEecccCCCCCeeeeeec
Q 023822 148 WDQRAEKCQGLLR------VQGRPAAAYDDQGLVFAVA----F--------------GGYIRMFDARKYEKGPFDIFSVG 203 (276)
Q Consensus 148 wd~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~----~--------------d~~i~~~d~~~~~~~~~~~~~~~ 203 (276)
||..+++...... ...+..++++|+|+++++. . .+.|..++.. ++ .....
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~ 168 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-----LSAPI 168 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----EEEEE
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-----EEEee
Confidence 9997776544331 2245679999999988862 2 2456666654 22 22233
Q ss_pred CCCCCceEEEECCCCcEEEEeecCCcEEEEECC-CCcE---EEEeecCCCCCCceEEEEECCCCcEEEEe
Q 023822 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTL---LSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 204 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 269 (276)
.+......++|+|+|+.|++.+.++.|.+|++. +++. ...+. .+...+..++++++|+++++.
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~---~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFT---VEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEEC---CSSSCCCSEEEBTTSCEEEEE
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEee---CCCCCCCeEEECCCCCEEEEc
Confidence 445567899999999988777778999999987 5555 33332 345667789999999877665
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=3e-15 Score=114.32 Aligned_cols=198 Identities=8% Similarity=0.023 Sum_probs=141.8
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee-eeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCc
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~ 112 (276)
...+.+++++++++++++.. ++.|.+||....... .+. .....+..+++.++++.+++... ++.|.+|+..+..
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~ 140 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKT 140 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCS
T ss_pred cCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECC---CCEEEEEECCCce
Confidence 35678899999998666655 889999998755432 232 22246889999999986666555 7889999765554
Q ss_pred eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-CCeEEEEec
Q 023822 113 YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDA 189 (276)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~ 189 (276)
...........+..++++++++++++...++.|.+||.......... .......+++++++.++++.. ++.|.+||.
T Consensus 141 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 141 QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 33322233346788999999997777777889999998876544322 223456899999998777776 789999998
Q ss_pred ccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE
Q 023822 190 RKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL 240 (276)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 240 (276)
..... ......+...+.+++++|+|+++++...++.|++++....+.
T Consensus 221 ~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 221 GSTTS----TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp TCSCC----EECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCcc----eeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 65332 111122335688999999999888888899999999865543
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.69 E-value=3e-13 Score=104.58 Aligned_cols=229 Identities=7% Similarity=0.007 Sum_probs=160.4
Q ss_pred cCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeee-eeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC
Q 023822 32 DYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~ 110 (276)
.....+.++++.++|++.++...++.|.+||.. ++.... +......+..+++.+++...++... ++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT-
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC-
Confidence 345678999999999988877778999999987 554331 2222356889999998887776654 7889999987
Q ss_pred Cceee-eecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeee-Ee--ecCCCeeEecCCCcEEEEee-CCeEE
Q 023822 111 NKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL-LR--VQGRPAAAYDDQGLVFAVAF-GGYIR 185 (276)
Q Consensus 111 ~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~~-d~~i~ 185 (276)
++... .+......+..+++.++++++++...++.|..+|.. ++.... +. ......++++++++++++.. ++.|.
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 55432 222234668899999999888777778899999987 444322 11 23355788999999777766 68899
Q ss_pred EEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcE
Q 023822 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265 (276)
Q Consensus 186 ~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 265 (276)
.||. .++ ...+........+..++++++|+++++....+.|.+|+. +++...... . .....+.+++++++|++
T Consensus 171 ~~~~-~g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~-~-~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 171 RITN-TGK---LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI-P-TPNARPHAITAGKNSEI 243 (300)
T ss_dssp EECT-TCC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC-S-STTCCEEEEEECSTTCE
T ss_pred EECC-CCc---EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC-C-CCCCCceEEEECCCCCE
Confidence 9998 322 122333334456889999999987776666778999997 555443321 1 24567889999999987
Q ss_pred EEEecCCC
Q 023822 266 VISGRVSP 273 (276)
Q Consensus 266 l~~~~~dg 273 (276)
.++...++
T Consensus 244 ~v~~~~~~ 251 (300)
T 2qc5_A 244 WFTEWGAN 251 (300)
T ss_dssp EEEETTTT
T ss_pred EEeccCCC
Confidence 66654433
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.68 E-value=1e-14 Score=117.32 Aligned_cols=226 Identities=8% Similarity=-0.037 Sum_probs=151.6
Q ss_pred CCCCEEEEeecC-----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC-------CCCCceEEEEccCC
Q 023822 44 KSSSYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDN 111 (276)
Q Consensus 44 ~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~~~d~~~~ 111 (276)
++++.+++.... +.|.++|..+++.+.++.....+ .+.++|++++++++... ..++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 466766665542 69999999999999999876666 89999999999888620 01678999999999
Q ss_pred ceeeeeccc-------CcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeeeEeecC---------CCeeEecCCC
Q 023822 112 KYLRYFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQG---------RPAAAYDDQG 173 (276)
Q Consensus 112 ~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~ 173 (276)
+.+..+.-. ......+.|+||+++++++.. ++.|.+.|+.+.+.+..+.... ...+.+++++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 988776421 123467899999999888764 5789999999998877764321 1123344444
Q ss_pred cEEEEee--------------------------------------CCeEEEEecccCCCCCeeeeeec--------CCCC
Q 023822 174 LVFAVAF--------------------------------------GGYIRMFDARKYEKGPFDIFSVG--------GDIS 207 (276)
Q Consensus 174 ~~l~~~~--------------------------------------d~~i~~~d~~~~~~~~~~~~~~~--------~~~~ 207 (276)
++++... .+.+.+.|...........+... ....
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 4333332 23344444432110000000000 0011
Q ss_pred CceEEEECCCCcEEEEeec----------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc-EEEEecC-CCCC
Q 023822 208 DANVVKFSNDGRLMLLTTM----------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGRV-SPFS 275 (276)
Q Consensus 208 ~i~~~~~~~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-dg~v 275 (276)
....++++|+++.+++... ++.|.++|..+.+.+..+. .......++|+|||+ +++++.. ++.|
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~----vg~~P~gia~spDg~~~lyv~n~~s~~V 395 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE----LGHEIDSINVSQDAEPLLYALSAGTQTL 395 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE----EEEEECEEEECCSSSCEEEEEETTTTEE
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE----CCCCcCeEEEccCCCEEEEEEcCCCCeE
Confidence 2223789999887777642 3579999999999999997 334688999999999 8888773 6655
No 204
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=4.6e-14 Score=122.24 Aligned_cols=224 Identities=7% Similarity=0.004 Sum_probs=147.2
Q ss_pred CCCCEEEEeecCC-----eEEEEEccCCeeeeeee------eeeeceEEEEEeccCCeEEEeccCCCC--CceEEEEccC
Q 023822 44 KSSSYLVTASDDE-----SIRLYDVTAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKNGWD--ESLRLLSLHD 110 (276)
Q Consensus 44 ~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~d--~~i~~~d~~~ 110 (276)
|+|++++....++ .+.+.+...++....+. .+...+..++|+||+++++.+...+.+ ..|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8898887654332 34555544444322221 233468899999999999987652111 2899999999
Q ss_pred CceeeeecccCcceEEEEeccCCCEEEEeeCCCe----------------EEEEeccCceee--eeEeec--C--CCeeE
Q 023822 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT----------------VLLWDQRAEKCQ--GLLRVQ--G--RPAAA 168 (276)
Q Consensus 111 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~----------------i~iwd~~~~~~~--~~~~~~--~--~~~~~ 168 (276)
++.......+ ..+..++|+||++.|+.++.++. |++|++.+++.. ..+... . ...+.
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 9876533222 23678999999999998887765 999999887632 222221 1 34789
Q ss_pred ecCCCcEEEEee------CCeEEEEeccc------CCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC----CcEEE
Q 023822 169 YDDQGLVFAVAF------GGYIRMFDARK------YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME----GHIHV 232 (276)
Q Consensus 169 ~~~~~~~l~~~~------d~~i~~~d~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i 232 (276)
|+|++++|+... +..|++||+.+ +... ...+..+...+.. .|+|+|+.|+..+.. +.|.+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK---WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC---CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc---eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEE
Confidence 999998777654 46899999986 3211 2223334344443 588999887776543 36999
Q ss_pred EECCCCcE--EEEeecCCCCC-CceEEEEECCCCcEEEEecCCCC
Q 023822 233 LDSFRGTL--LSTYNVKPVSR-NSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 233 ~d~~~~~~--~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
||+.+++. ...+.. ... ..+..++|++++.++++...|+.
T Consensus 316 ~d~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVP--EHEKDVLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EETTSCCGGGCEEEEC--CCSSCEEEEEEEETTTEEEEEEEETTE
T ss_pred EeCCCCCcccceeccC--CCCCCeEEEEEEEcCCEEEEEEEECCE
Confidence 99987742 233431 122 36888999988888888887763
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.67 E-value=4e-15 Score=118.07 Aligned_cols=175 Identities=16% Similarity=0.124 Sum_probs=132.9
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCe---------eee-eeeeeeeceEEEEEeccCCeEEEeccCCCCCceEE
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAAT---------CLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~ 105 (276)
+++.+++++...++++|+.++ +++|+++..+ ... ....+.. |..++| +++.|+++ . ++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~---~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-T---RNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-E---SSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-c---CCcEEE
Confidence 689999999999999999885 6679976443 111 1223445 999999 99999998 5 899999
Q ss_pred EEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEeeCCeEE
Q 023822 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIR 185 (276)
Q Consensus 106 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~ 185 (276)
||+.+.........|...+.++.+.+. .+++++.||.|.+||+..+.... ....+.+++|+|+| +.++..||.++
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~--~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ--LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE--EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc--ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 999887766666777888888877654 38889999999999999877644 45678999999999 55555599999
Q ss_pred EEecccCCCCCeeeee----ec---CCCCCceEEEECCCCcEEEE
Q 023822 186 MFDARKYEKGPFDIFS----VG---GDISDANVVKFSNDGRLMLL 223 (276)
Q Consensus 186 ~~d~~~~~~~~~~~~~----~~---~~~~~i~~~~~~~~~~~l~~ 223 (276)
+|+....+..+..... +. .|...|.++.|.+++.++++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9988764411011110 12 36678999999999998877
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.67 E-value=5e-15 Score=117.54 Aligned_cols=172 Identities=9% Similarity=0.070 Sum_probs=125.7
Q ss_pred ceEEEEEeccCCeEEEeccCCCCCceEEEEccCCc---------e-eeeecccCcceEEEEeccCCCEEEEeeCCCeEEE
Q 023822 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK---------Y-LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLL 147 (276)
Q Consensus 78 ~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~---------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 147 (276)
++..+++++....+++++. + .+.+|++...+ . ......+.. |..++| ++++|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~---~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG---S-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEET---T-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCC---C-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 6899999999999999884 4 66779875433 1 112223666 999999 88999988 8899999
Q ss_pred EeccCceeeeeEee--cCCCeeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee
Q 023822 148 WDQRAEKCQGLLRV--QGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 148 wd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
||+++.......+. ..+..+.+.+. .++++..||.|.+||+..... . . +...|++++|||+| ++.|.
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~~~~----~-~---~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN-TLVILNSVNDLSALDLRTKST----K-Q---LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCE----E-E---EEESEEEEEECSSE--EEEEE
T ss_pred EEchhhhccCccceeecceeeEEecCC-CEEEEECCCCEEEEEccCCcc----c-c---ccCCceEEEEcCCc--eEEEE
Confidence 99987654433322 22334444443 366666699999999986543 1 1 23479999999999 67889
Q ss_pred cCCcEEEEECCCCcE--EEEeec------CCCCCCceEEEEECCCCcEEEE
Q 023822 226 MEGHIHVLDSFRGTL--LSTYNV------KPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 226 ~dg~i~i~d~~~~~~--~~~~~~------~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
.||.+++|+...++. .+++.. +.+|...|.++.|.+++.+|++
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 999999999877775 555521 1136788999999999999876
No 207
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=1.4e-13 Score=105.33 Aligned_cols=222 Identities=9% Similarity=0.037 Sum_probs=157.8
Q ss_pred cccceeeccCC-CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeee-eceEEEEEeccCCeEEEeccCCCCC
Q 023822 24 MEVGMSFRDYN-GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDE 101 (276)
Q Consensus 24 ~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~ 101 (276)
-+.+.++..+. ..+.+++++|+|++|+ +.++.|..||. +++.+..+..+. ..+.++.+.++++.+++.+.. ++
T Consensus 25 G~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~--~~ 99 (276)
T 3no2_A 25 KEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH--PS 99 (276)
T ss_dssp TEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST--TE
T ss_pred CeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCC--CC
Confidence 34445565555 4688999999999888 34678999998 899888887652 468889999999999887631 45
Q ss_pred ceEEEEccCCceeeeec------ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee-cCCCeeEecCCCc
Q 023822 102 SLRLLSLHDNKYLRYFK------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-QGRPAAAYDDQGL 174 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~ 174 (276)
.+..+|. +++.+..+. .+......+++.++++++++...++.|..||.. ++.+..+.. .....+...+++.
T Consensus 100 ~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~ 177 (276)
T 3no2_A 100 TILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGD 177 (276)
T ss_dssp EEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSC
T ss_pred EEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCC
Confidence 6777775 677666553 122345566788999999999999999999988 887777743 3456778889999
Q ss_pred EEEEee-CCeEEEEecccCCCCCeeeeeecCC------CCCceEEEECCCCcEEEEeecC--------CcEEEEEC-CCC
Q 023822 175 VFAVAF-GGYIRMFDARKYEKGPFDIFSVGGD------ISDANVVKFSNDGRLMLLTTME--------GHIHVLDS-FRG 238 (276)
Q Consensus 175 ~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~d~-~~~ 238 (276)
+++++. ++.|..+|..+++. +..+... ...+..++..++|..+++.... +..+++++ .++
T Consensus 178 ~~v~~~~~~~v~~~d~~tG~~----~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 178 CLVACGDAHCFVQLNLESNRI----VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp EEEECBTTSEEEEECTTTCCE----EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred EEEEeCCCCeEEEEeCcCCcE----EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 888887 56899999987664 3333221 1236788899999988776321 23456665 588
Q ss_pred cEEEEeecCCCCCCceEEE
Q 023822 239 TLLSTYNVKPVSRNSTLEA 257 (276)
Q Consensus 239 ~~~~~~~~~~~~~~~v~~~ 257 (276)
+.+-++.... .-+.+..+
T Consensus 254 ~~~W~~~~~~-~~~~~~~~ 271 (276)
T 3no2_A 254 KVVWQLNDKV-KFGMISTI 271 (276)
T ss_dssp BEEEEECCTT-TSCCCCEE
T ss_pred CEEEEecCcc-cccceeee
Confidence 8887776432 23444444
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.66 E-value=1e-12 Score=101.56 Aligned_cols=225 Identities=8% Similarity=0.090 Sum_probs=156.9
Q ss_pred CCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeee-eeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC
Q 023822 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 111 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~ 111 (276)
+...+.++++.++++++++...++.|..||.. ++... ........+..+++.+++..+++... ++.|..+|.. +
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g 134 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-G 134 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT-S
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC-C
Confidence 34678999999999877777667899999987 55432 12222356889999998887776655 7889999987 5
Q ss_pred ceee-eecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE---eecCCCeeEecCCCcEEEEee-CCeEEE
Q 023822 112 KYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGRPAAAYDDQGLVFAVAF-GGYIRM 186 (276)
Q Consensus 112 ~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d~~i~~ 186 (276)
+... .+......+..+++.++++++++...++.|..+|. +++..... ....+..+++++++.++++.. .+.|.+
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 213 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGR 213 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEE
Confidence 5432 23334456889999999997776666789999998 44433321 112345788999998887776 578999
Q ss_pred EecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEE
Q 023822 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 266 (276)
Q Consensus 187 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 266 (276)
||. .++ ............+.+++++++|+++++...++.|..||. +++.. .+... .....+.+++++++|++.
T Consensus 214 ~~~-~g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~-~~~~~~~~i~~~~~g~l~ 286 (300)
T 2qc5_A 214 ITT-TGE---ISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQ-TENAEPHGITFGKDGSVW 286 (300)
T ss_dssp ECT-TCC---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECC-STTCCCCCEEECTTSCEE
T ss_pred EcC-CCc---EEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECC-ccCCccceeEeCCCCCEE
Confidence 998 322 222223334456889999999996666666789999997 55443 33221 234568899999999877
Q ss_pred EEec
Q 023822 267 ISGR 270 (276)
Q Consensus 267 ~~~~ 270 (276)
++..
T Consensus 287 v~~~ 290 (300)
T 2qc5_A 287 FALK 290 (300)
T ss_dssp EECS
T ss_pred EEcc
Confidence 6654
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=1.2e-13 Score=109.26 Aligned_cols=243 Identities=9% Similarity=0.020 Sum_probs=154.8
Q ss_pred cccceeeccCCCcEEEEEEcCCCCEEEEee--cCCeEEEEEccCCeeeeeee-------eeeeceEEEEEeccCCeEEEe
Q 023822 24 MEVGMSFRDYNGRISSMDFHKSSSYLVTAS--DDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSHPTTVIYS 94 (276)
Q Consensus 24 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~ 94 (276)
++.+..+. ..+..++++++|+.+++.. .++.++||.+.+++.. .+. .+-..+..+++.++++.+++-
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D 84 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLD 84 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEE
T ss_pred eEEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEc
Confidence 44444443 6789999999999988864 2343556665555432 221 233578999999997654443
Q ss_pred ccC--CCCCceEEEEccCCceeeeecc------cCcceEEEEeccCCCE-EEEee---CCCeEEEEeccCceeeeeEee-
Q 023822 95 SKN--GWDESLRLLSLHDNKYLRYFKG------HHDRVVSLSLCSSKDC-FISGS---LDRTVLLWDQRAEKCQGLLRV- 161 (276)
Q Consensus 95 ~~~--~~d~~i~~~d~~~~~~~~~~~~------~~~~i~~~~~~~~~~~-l~~~~---~d~~i~iwd~~~~~~~~~~~~- 161 (276)
... ..+..|.+||+.+++.+..+.. +...+..+++++++.. +++.. .++.|.+||+.+++....+..
T Consensus 85 ~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 85 NGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY 164 (343)
T ss_dssp CHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred CCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence 210 0036899999999887665542 2235688999986544 45544 578999999987665443311
Q ss_pred ------------------------------cCCCeeEecCCCcEEEEee-C-CeEEEEecccCCCCCe------eeeeec
Q 023822 162 ------------------------------QGRPAAAYDDQGLVFAVAF-G-GYIRMFDARKYEKGPF------DIFSVG 203 (276)
Q Consensus 162 ------------------------------~~~~~~~~~~~~~~l~~~~-d-~~i~~~d~~~~~~~~~------~~~~~~ 203 (276)
.....++++|+++.|..+. . ..+..++......... ..+...
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T 2qe8_A 165 PGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY 244 (343)
T ss_dssp TTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE
T ss_pred CcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec
Confidence 1234689999997766665 3 4666665432111000 001111
Q ss_pred CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCC
Q 023822 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 204 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
++......++++++|.++++...++.|.+||..+++....... .....+.+++|.++|+++++.+..
T Consensus 245 g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~--~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 245 SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD--EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC--GGGSCEEEEEECTTSCEEEEECCG
T ss_pred ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC--CceecCCeeEECCCCcEEEEeCcc
Confidence 2233567799999999888888899999999856765433331 124568999999999888777644
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.65 E-value=4.9e-14 Score=121.66 Aligned_cols=230 Identities=13% Similarity=0.092 Sum_probs=146.3
Q ss_pred cCCCcEEEEEEcCCCCEEEEe-----ecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC---------
Q 023822 32 DYNGRISSMDFHKSSSYLVTA-----SDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN--------- 97 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------- 97 (276)
+|...+..++|||||++||.+ +.+..|++||+.+++.+.. .........++|+ |++.|+.+...
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 466678899999999999843 3335799999999986543 2222224678999 99999988762
Q ss_pred -CCCCceEEEEccCCce----eeeecc-cCcceEEEEeccCCCEEEEeeC----CCeEEEEeccCce-eeeeEe-ecCCC
Q 023822 98 -GWDESLRLLSLHDNKY----LRYFKG-HHDRVVSLSLCSSKDCFISGSL----DRTVLLWDQRAEK-CQGLLR-VQGRP 165 (276)
Q Consensus 98 -~~d~~i~~~d~~~~~~----~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~-~~~~~~-~~~~~ 165 (276)
+....|++|++.++.. +..... |......+.|+||+++|+.... +..|+++|+.++. ....+. .....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 1123599999877642 222233 4455788999999997754432 3589999998763 223332 11222
Q ss_pred eeEecCCC-cEEEEee-C---CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-C--cEEEEECCC
Q 023822 166 AAAYDDQG-LVFAVAF-G---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-G--HIHVLDSFR 237 (276)
Q Consensus 166 ~~~~~~~~-~~l~~~~-d---~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g--~i~i~d~~~ 237 (276)
.-.+++++ .+++.+. + +.|..+|+.++...... .+..+...+. .|+++++.|+....+ + .|++|++..
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~--~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWR--DLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE--EEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccE--EEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 22255554 4444444 2 68999998875432112 2223333444 899999888776654 3 689999874
Q ss_pred CcEEEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 238 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
+ ....+.. ...+.+..+.++++++.|+...
T Consensus 360 ~-~~~~l~~--p~~~~~~~~~~~~d~~~l~~~~ 389 (693)
T 3iuj_A 360 K-RVREVAL--PGLGSVSGFNGKHDDPALYFGF 389 (693)
T ss_dssp C-EEEEECC--SSSSEEEECCCCTTCSCEEEEE
T ss_pred C-eeEEeec--CCCceEEeeecCCCCCEEEEEe
Confidence 4 4445442 2345677888888887665543
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.64 E-value=5.1e-13 Score=106.57 Aligned_cols=226 Identities=13% Similarity=0.097 Sum_probs=149.7
Q ss_pred CCCCEEEE-eecCCeEEEEEccCC----eeeeeee-------eeeeceEEEEEeccCCeEEEeccC---CCCCceEEEEc
Q 023822 44 KSSSYLVT-ASDDESIRLYDVTAA----TCLKTIN-------SKKYGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSL 108 (276)
Q Consensus 44 ~~~~~l~~-~~~d~~i~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~---~~d~~i~~~d~ 108 (276)
+++++|+. +..++.|.++|+.+. +...+++ ........+...|++ .++++..+ +..+.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77777765 557789999998755 5556553 112245667888999 55554431 11378999999
Q ss_pred cCCceeeeecccC---cceEEEEeccCCCEEEEee-------------------CCCeEEEEeccCceeeeeEeec----
Q 023822 109 HDNKYLRYFKGHH---DRVVSLSLCSSKDCFISGS-------------------LDRTVLLWDQRAEKCQGLLRVQ---- 162 (276)
Q Consensus 109 ~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~---- 162 (276)
.+++.+.++.... ..-..+.|+|+++.+++.. .+.+|.+||+.+++.+..+...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999988886322 2234588899999888874 3689999999998888877543
Q ss_pred CCCeeEe--cCCCcEEEEee-------CCeEEEEecccCCCCCeeeeeecCC----------------CCCceEEEECCC
Q 023822 163 GRPAAAY--DDQGLVFAVAF-------GGYIRMFDARKYEKGPFDIFSVGGD----------------ISDANVVKFSND 217 (276)
Q Consensus 163 ~~~~~~~--~~~~~~l~~~~-------d~~i~~~d~~~~~~~~~~~~~~~~~----------------~~~i~~~~~~~~ 217 (276)
....+.| +|+++++.++. +++|.+|....+.-.......+... ......+.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 2334444 99997665543 4678776665322111111111110 235788999999
Q ss_pred CcEEEEeec-CCcEEEEECCC---CcEEEEeecCC-----------CCCCceEEEEECCCCcEEEEec
Q 023822 218 GRLMLLTTM-EGHIHVLDSFR---GTLLSTYNVKP-----------VSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 218 ~~~l~~~~~-dg~i~i~d~~~---~~~~~~~~~~~-----------~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
|++|+++.. .+.|.+||+.+ .+++..+.... ...+....++++|||++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999988764 67999999853 35555554210 0012468899999999998886
No 212
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=6.5e-14 Score=121.02 Aligned_cols=221 Identities=9% Similarity=0.024 Sum_probs=140.8
Q ss_pred cCCCCEEEEeecCC-----eEEEEEccCCeeeeeee------eeeeceEEEEEeccCCeEEEeccCC--CCCceEEEEcc
Q 023822 43 HKSSSYLVTASDDE-----SIRLYDVTAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLH 109 (276)
Q Consensus 43 ~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~~~d~~ 109 (276)
+|+|++++....++ .+.+.+...++....+. .|...+..++|+||+++|+.+...+ .+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37899888766543 34444444444333222 2344689999999999998654321 14789999999
Q ss_pred CCcee-eeecccCcce--EEEEeccCCCEEEEeeCCCe-------------EEEEeccCceee--eeEee----cCCCee
Q 023822 110 DNKYL-RYFKGHHDRV--VSLSLCSSKDCFISGSLDRT-------------VLLWDQRAEKCQ--GLLRV----QGRPAA 167 (276)
Q Consensus 110 ~~~~~-~~~~~~~~~i--~~~~~~~~~~~l~~~~~d~~-------------i~iwd~~~~~~~--~~~~~----~~~~~~ 167 (276)
+++.+ .. +...+ ..++|+|||+.|+.++.|.. |++|++.+++.. ..+.. .....+
T Consensus 156 tg~~~~~~---~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 156 SGEWSKVD---VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp TCCBCSSC---CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred CCCCcCCc---ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 98865 21 11222 67899999999999988766 999999887632 22221 234578
Q ss_pred EecCCCcEEEEee-CC----eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee---cCCcEEEEECCCCc
Q 023822 168 AYDDQGLVFAVAF-GG----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGT 239 (276)
Q Consensus 168 ~~~~~~~~l~~~~-d~----~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~ 239 (276)
.++|+|++++... ++ .|++++..+++ ...+..+...+....+ ++|.+++.+. .++.|.+||+.+++
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKD-----FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSS-----CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCc-----eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 9999998777665 44 66666554332 2222233345556666 6666444433 25789999998775
Q ss_pred E--EEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 240 L--LSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 240 ~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
. ...+..+ .....+..++|+ ++.++++...|+.
T Consensus 307 ~~~~~~l~~~-~~~~~l~~~~~~-~~~lv~~~~~dg~ 341 (695)
T 2bkl_A 307 RASWKEIVPE-DSSASLLSVSIV-GGHLSLEYLKDAT 341 (695)
T ss_dssp GGGCEEEECC-CSSCEEEEEEEE-TTEEEEEEEETTE
T ss_pred ccCCeEEecC-CCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 3 2233211 124568888998 7778888877764
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=1.8e-12 Score=104.29 Aligned_cols=214 Identities=13% Similarity=0.127 Sum_probs=141.3
Q ss_pred ccccceeeccCCCcEEEEEEcCCCCEEEEee----------cCCeEEEEEccCCeeeeeeeee-------eeceEEEEEe
Q 023822 23 SMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFT 85 (276)
Q Consensus 23 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~ 85 (276)
+.+.+.++.--..+ .++++||+++|+++. .++.|.++|..+++.+..+... ......+.++
T Consensus 108 t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~s 185 (426)
T 3c75_H 108 TGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALT 185 (426)
T ss_dssp TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEEC
T ss_pred CCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEc
Confidence 34555555544455 799999999988776 3678999999999988887642 1245678999
Q ss_pred ccCCeEEEeccCCCCCceEEEEccCCceeeeecccCc-------ceEEEEeccCC-------------------------
Q 023822 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD-------RVVSLSLCSSK------------------------- 133 (276)
Q Consensus 86 ~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~-------~i~~~~~~~~~------------------------- 133 (276)
|++++++++... .++.|.+.|+.+++.+..+.-... .-..+.+++++
T Consensus 186 pDGk~lyV~n~~-~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~ 264 (426)
T 3c75_H 186 PDNKNLLFYQFS-PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDE 264 (426)
T ss_dssp TTSSEEEEEECS-SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTS
T ss_pred CCCCEEEEEecC-CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCC
Confidence 999999998641 157899999999988776643110 00112233333
Q ss_pred ------------CEEEEeeCCCeEEEEeccCceee--eeE------------eecCCCeeEecCCCcEEEEee-------
Q 023822 134 ------------DCFISGSLDRTVLLWDQRAEKCQ--GLL------------RVQGRPAAAYDDQGLVFAVAF------- 180 (276)
Q Consensus 134 ------------~~l~~~~~d~~i~iwd~~~~~~~--~~~------------~~~~~~~~~~~~~~~~l~~~~------- 180 (276)
..++.....+.+.+.|+...... ..+ ...+...++++|++..+.+..
T Consensus 265 p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gt 344 (426)
T 3c75_H 265 LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWK 344 (426)
T ss_dssp CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTC
T ss_pred ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccccc
Confidence 33333334455566665433211 111 112223478898876554443
Q ss_pred ----CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCc-EEEEee-cCCcEEEEECCCCcEEEEe
Q 023822 181 ----GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTT-MEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 181 ----d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~~~~~~ 244 (276)
++.|.++|..+.+. +..+.. ......++|+|+|+ ++++.. .++.|.++|+.+++.++++
T Consensus 345 hk~~s~~VsVID~~T~kv----v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 345 HKAASRFVVVLNAETGER----INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTSCEEEEEEEETTTCCE----EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ccCCCCEEEEEECCCCeE----EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 24799999988653 222221 12478899999999 888887 5899999999999999987
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.57 E-value=4e-15 Score=118.82 Aligned_cols=203 Identities=16% Similarity=0.063 Sum_probs=115.5
Q ss_pred CCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcc-
Q 023822 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDR- 123 (276)
Q Consensus 45 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~- 123 (276)
++..+++++.|+.|+.||..+|+.+..+.. .++.+..+..++..+++++. |+.|+.||..+++.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~---dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPN---DGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTT---TCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCC---CCEEEEEECCCCceeeeeeccCccc
Confidence 567899999999999999999999887766 45555556667777777666 999999999999877666533211
Q ss_pred eE-EEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEe-eCCeEEEEecccCCCCCeeeee
Q 023822 124 VV-SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVA-FGGYIRMFDARKYEKGPFDIFS 201 (276)
Q Consensus 124 i~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~ 201 (276)
+. +..+. .+..+++++.|+.|+.||.++++.+..+.... ...++|++..++++ .++.|+.||.++++..... .
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~--~ 157 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA--T 157 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEE--E
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeE--e
Confidence 11 11111 34567888889999999999998876664332 23445565555544 4899999999987752211 1
Q ss_pred ecCCCCCceEEEECCCC---cEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceE-EEEECCCCcE
Q 023822 202 VGGDISDANVVKFSNDG---RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL-EASFSPEGMF 265 (276)
Q Consensus 202 ~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~ 265 (276)
... ....++.++. ..+++++.||.|+.||..+|+.+-.+. ...++. ...++++|..
T Consensus 158 ~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~----~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 158 YFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN----YASPVVAFYVWQREGLR 217 (369)
T ss_dssp EEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE----CSSCEEEEEECTTSSCE
T ss_pred ccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec----CCCceEEEEEecCCceE
Confidence 111 1222333332 457778899999999999999988776 334443 3456667643
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.57 E-value=2.2e-13 Score=107.84 Aligned_cols=210 Identities=8% Similarity=-0.050 Sum_probs=134.0
Q ss_pred eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC-------CCCCceEEEEccCCceeeeeccc-------Cc
Q 023822 57 SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDNKYLRYFKGH-------HD 122 (276)
Q Consensus 57 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~~~d~~~~~~~~~~~~~-------~~ 122 (276)
+|.+.|..+++.+.++.....+ .+.++|++++++++... ..++.|.+||+.+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999876666 79999999999998620 01688999999999999888643 12
Q ss_pred ceEEEEeccCCCEEEEeeC--CCeEEE--EeccCceeeeeEeecC---------CCeeEecCCCcE--------------
Q 023822 123 RVVSLSLCSSKDCFISGSL--DRTVLL--WDQRAEKCQGLLRVQG---------RPAAAYDDQGLV-------------- 175 (276)
Q Consensus 123 ~i~~~~~~~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~~---------~~~~~~~~~~~~-------------- 175 (276)
....++++|||++++++.. +..+.+ +|+.+ +..+.... ...+..++++++
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 3567999999999888865 467888 99876 22221111 011222222222
Q ss_pred ------------------------EEEeeCCeEEEEecccCCCCCeeeeeecC--------CCCCceEEEECCCCcEEEE
Q 023822 176 ------------------------FAVAFGGYIRMFDARKYEKGPFDIFSVGG--------DISDANVVKFSNDGRLMLL 223 (276)
Q Consensus 176 ------------------------l~~~~d~~i~~~d~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~ 223 (276)
+.++. +.+.+.|.............+.. .......++++|+++.+++
T Consensus 202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred EEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 22222 34444444321110000000000 0111222789999988887
Q ss_pred eec---------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcE-EEEec-CCCCCC
Q 023822 224 TTM---------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF-VISGR-VSPFSS 276 (276)
Q Consensus 224 ~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~-~dg~vs 276 (276)
+.. ++.+.++|+.+++.+..+.. ......++|+|||++ +++.. .++.|+
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 543 23567999999999998873 346889999999984 55555 366553
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.54 E-value=1.4e-11 Score=97.54 Aligned_cols=210 Identities=12% Similarity=0.145 Sum_probs=139.4
Q ss_pred EEEEEEcCCCCEEEEeec--CCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC-Cce
Q 023822 37 ISSMDFHKSSSYLVTASD--DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKY 113 (276)
Q Consensus 37 v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~-~~~ 113 (276)
-..++|+|||++|+++.. ++.|.++|+.+++.+.++.... . ...+....+.+++.+. ||.+.+.++.+ ++.
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~---DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCR---DGSLAKVAFGTEGTP 212 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEET---TSCEEEEECCSSSCC
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECC---CCCEEEEECCCCCeE
Confidence 456899999999988864 6899999999999998885432 1 1223334455555555 88888888765 444
Q ss_pred eeeeccc----CcceE-EEEec-cCCCEEEEeeCCCeEEEEeccCce--eeeeE------------eecCCCeeEecCCC
Q 023822 114 LRYFKGH----HDRVV-SLSLC-SSKDCFISGSLDRTVLLWDQRAEK--CQGLL------------RVQGRPAAAYDDQG 173 (276)
Q Consensus 114 ~~~~~~~----~~~i~-~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~------------~~~~~~~~~~~~~~ 173 (276)
......+ ..++. ...|. ++|++++ .+.+|.|.+.|+.+.. ....+ ...+...+++++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 213 EITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred EEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC
Confidence 2211111 12221 23554 5775444 5568999999997653 33322 23445578889888
Q ss_pred cEEEEee-----------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCc-EEEEee-cCCcEEEEECCCCcE
Q 023822 174 LVFAVAF-----------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR-LMLLTT-MEGHIHVLDSFRGTL 240 (276)
Q Consensus 174 ~~l~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~~ 240 (276)
..+.+.. .+.|.++|+++.+. ....... ..+..++++||++ +|+++. .++.|.++|..+++.
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv--~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGER--LAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeE--EEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 6666653 15799999988663 2222222 3678999999996 666654 589999999999999
Q ss_pred EEEeecCCCCCCceEEEEECCC
Q 023822 241 LSTYNVKPVSRNSTLEASFSPE 262 (276)
Q Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~ 262 (276)
+.++.. .+..+.+.+++|
T Consensus 367 ~~~i~~----~~~p~~l~~s~d 384 (386)
T 3sjl_D 367 LRSVNQ----LGHGPQVITTAD 384 (386)
T ss_dssp EEEECC----CCSSCCEEEECC
T ss_pred EEEecC----CCCCceeEECCc
Confidence 999983 344455677776
No 217
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.54 E-value=2.4e-12 Score=112.00 Aligned_cols=223 Identities=10% Similarity=0.081 Sum_probs=139.4
Q ss_pred cCCCCEEEEeecCCe---EEEEEc--c---CCeeeeee------eeeeeceEEEEEeccCCeEEEeccCCCC--CceEEE
Q 023822 43 HKSSSYLVTASDDES---IRLYDV--T---AATCLKTI------NSKKYGVDLVCFTSHPTTVIYSSKNGWD--ESLRLL 106 (276)
Q Consensus 43 ~~~~~~l~~~~~d~~---i~iwd~--~---~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~~~~d--~~i~~~ 106 (276)
+|+|++++....++. -.+|.. . .++....+ ..+...+..++|+||+++++.+...+.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 389998887665432 444543 3 33322221 1223468899999999999988652112 469999
Q ss_pred EccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCe--------------EEEEeccCceee--eeEeec----CCCe
Q 023822 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRT--------------VLLWDQRAEKCQ--GLLRVQ----GRPA 166 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~--------------i~iwd~~~~~~~--~~~~~~----~~~~ 166 (276)
|+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.++... ..+... ....
T Consensus 195 dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99999875431 12222467899999 98888876554 899998776532 222221 2457
Q ss_pred eEecCCCcEEEEee-CC-----eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeec----CCcEEEEECC
Q 023822 167 AAYDDQGLVFAVAF-GG-----YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSF 236 (276)
Q Consensus 167 ~~~~~~~~~l~~~~-d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~i~d~~ 236 (276)
+.|+|+|++++... ++ .|++||+.++..... ..+..+....... ++|+|+.|+..+. ++.|.+||+.
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~--~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV--TALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC--EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc--EEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 88999998776655 33 899999987521101 1122233334444 3488888887765 3459999988
Q ss_pred CC--cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 237 RG--TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 237 ~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
++ +....+. .+...+..++|+ ++.++++...||.
T Consensus 350 ~~~~~~~~l~~---~~~~~l~~~~~~-~~~lv~~~~~dg~ 385 (741)
T 1yr2_A 350 GSTPRFDTVVP---ESKDNLESVGIA-GNRLFASYIHDAK 385 (741)
T ss_dssp SSSCEEEEEEC---CCSSEEEEEEEE-BTEEEEEEEETTE
T ss_pred CCccccEEEec---CCCCeEEEEEEE-CCEEEEEEEECCE
Confidence 75 3333333 345567778887 5677777777764
No 218
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.52 E-value=3.3e-12 Score=105.34 Aligned_cols=222 Identities=7% Similarity=0.066 Sum_probs=155.1
Q ss_pred CCCEEEEeec-CCeEEEEEccCCeeeeeeeeee-eceEEEEE-e-ccCCeEEEeccC---------------CCCCceEE
Q 023822 45 SSSYLVTASD-DESIRLYDVTAATCLKTINSKK-YGVDLVCF-T-SHPTTVIYSSKN---------------GWDESLRL 105 (276)
Q Consensus 45 ~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~-~-~~~~~l~~~~~~---------------~~d~~i~~ 105 (276)
||++|..... ++.|.+.|+.+.++...+.... .....+++ . |+++++++++.. .+++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7888776654 5679999999999888654332 35778887 4 899999888521 12678999
Q ss_pred EEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCC--------------------------------------eEEE
Q 023822 106 LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR--------------------------------------TVLL 147 (276)
Q Consensus 106 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------------------------------------~i~i 147 (276)
.|..+.+...++.--. ....++++|+|+++++.+.+. .|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998888776323 456788999999988888553 3667
Q ss_pred EeccC--cee-eeeE-eecCCCeeEecCCCcEEEEee--CCeEEEEecccCCC------CCe-eeeeecCCCCCceEEEE
Q 023822 148 WDQRA--EKC-QGLL-RVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEK------GPF-DIFSVGGDISDANVVKF 214 (276)
Q Consensus 148 wd~~~--~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~------~~~-~~~~~~~~~~~i~~~~~ 214 (276)
.|.++ ++. +..+ -.....++.++|||++++++. +.+|.++|+.+.+. .+. .......-......++|
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF 338 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAF 338 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEE
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEE
Confidence 77776 333 3444 334566899999999888887 79999999986420 000 01111122346788999
Q ss_pred CCCCcEEEEeecCCcEEEEECCC----------CcEEEEeecCCCCCCce-----EEEEECCCCcEEEEec
Q 023822 215 SNDGRLMLLTTMEGHIHVLDSFR----------GTLLSTYNVKPVSRNST-----LEASFSPEGMFVISGR 270 (276)
Q Consensus 215 ~~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~~~~~~~~v-----~~~~~s~~g~~l~~~~ 270 (276)
+|+|....+.-.|+.|.+||+.+ .+.+..+. .+-.+- ..+.++|||++|+++.
T Consensus 339 ~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid---V~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 339 DGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD---VHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp CTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE---CSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred CCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee---cccccccceeccceEeCCCCCEEEEcC
Confidence 99994444556789999999877 56677766 232221 2235689999998864
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.51 E-value=2.1e-12 Score=102.19 Aligned_cols=224 Identities=11% Similarity=0.001 Sum_probs=141.4
Q ss_pred hccccceeeccCCCcEEEEEEcCCCCEEEEee----------cCCeEEEEEccCCeeeeeeeee-------eeceEEEEE
Q 023822 22 QSMEVGMSFRDYNGRISSMDFHKSSSYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCF 84 (276)
Q Consensus 22 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~ 84 (276)
.+.+.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+.++... ......+.+
T Consensus 54 ~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 54 GCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE
Confidence 345566666554556 799999999998886 3689999999999999988654 124678999
Q ss_pred eccCCeEEEeccCCCCCceEE--EEccCCceeeeecc---------c---------CcceEEEEe---------------
Q 023822 85 TSHPTTVIYSSKNGWDESLRL--LSLHDNKYLRYFKG---------H---------HDRVVSLSL--------------- 129 (276)
Q Consensus 85 ~~~~~~l~~~~~~~~d~~i~~--~d~~~~~~~~~~~~---------~---------~~~i~~~~~--------------- 129 (276)
+|++++++++.... +..+.+ +|+.+ +..+.. + .+.+..+..
T Consensus 132 SpDGk~lyVan~~~-~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t 207 (368)
T 1mda_H 132 CASSACLLFFLFGS-SAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT 207 (368)
T ss_dssp CTTSSCEEEEECSS-SCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC
T ss_pred cCCCCEEEEEccCC-CCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee
Confidence 99999999986411 356888 88865 222210 0 000000100
Q ss_pred -----------ccCCCEEEEeeCCCeEEEEeccCce--eeeeE------------eecCCCeeEecCCCcEEEEe-e-C-
Q 023822 130 -----------CSSKDCFISGSLDRTVLLWDQRAEK--CQGLL------------RVQGRPAAAYDDQGLVFAVA-F-G- 181 (276)
Q Consensus 130 -----------~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~------------~~~~~~~~~~~~~~~~l~~~-~-d- 181 (276)
.+++..++..+. +.+.+.|+.... ....+ ...+...+.++|+++.+.++ . .
T Consensus 208 ~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~ 286 (368)
T 1mda_H 208 GAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS 286 (368)
T ss_dssp TTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECS
T ss_pred eeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecccc
Confidence 223333333334 667777765421 22211 11222347899998666544 2 2
Q ss_pred -------CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcE-EEEee-cCCcEEEEECCCCcEEEEeecCCCCCC
Q 023822 182 -------GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL-MLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRN 252 (276)
Q Consensus 182 -------~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~ 252 (276)
+.+.++|+.+.+. +..+... .....++|+|+|++ +++.. .++.|.++|+.+++.+..+. ...
T Consensus 287 ~~~~~~~~~~~ViD~~t~~v----v~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~----vg~ 357 (368)
T 1mda_H 287 RSCLAAAENTSSVTASVGQT----SGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE----LDK 357 (368)
T ss_dssp SCTTSCEEEEEEEESSSCCE----EECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC----CCS
T ss_pred CcccccCCCEEEEECCCCeE----EEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE----CCC
Confidence 3667999988653 2222211 25788999999974 55555 58999999999999999987 334
Q ss_pred ceEEEEECC
Q 023822 253 STLEASFSP 261 (276)
Q Consensus 253 ~v~~~~~s~ 261 (276)
....+++.+
T Consensus 358 ~P~~i~~~~ 366 (368)
T 1mda_H 358 GPESLSVQN 366 (368)
T ss_dssp CCCEEECCC
T ss_pred CCCEEEeec
Confidence 455666654
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.51 E-value=3.4e-11 Score=96.07 Aligned_cols=225 Identities=6% Similarity=-0.083 Sum_probs=143.9
Q ss_pred EEcCCCCEEEEeec--CC---eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC-------CCCCceEEEEc
Q 023822 41 DFHKSSSYLVTASD--DE---SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSL 108 (276)
Q Consensus 41 ~~~~~~~~l~~~~~--d~---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~~~d~ 108 (276)
...|+++++++... .. .|.++|..+++.+..+.....+ .++++|++++++++... ..++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 33467777776653 22 8899999999988887755444 99999999999998621 11678999999
Q ss_pred cCCceeeeeccc-------CcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeee-EeecCCCeeEecCCC--cEE
Q 023822 109 HDNKYLRYFKGH-------HDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAYDDQG--LVF 176 (276)
Q Consensus 109 ~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~--~~l 176 (276)
.+.+.+..+.-. ......+.|+|||++|+++.. ++.|.++| .+++.+.. +.... ++.+.|++ .++
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~~~~~~~~~~~~~ 181 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--CYHIHPGAPSTFY 181 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--eEEEEeCCCceEE
Confidence 988877766422 123458999999999998874 47899999 99888776 53322 34455554 344
Q ss_pred EEeeCCeEEEEecccCCCCCeeee-eecCCCCC-ceEEEECCCCcEEEEeecCCcEEEEECCCCc--EEEEeecCCC---
Q 023822 177 AVAFGGYIRMFDARKYEKGPFDIF-SVGGDISD-ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKPV--- 249 (276)
Q Consensus 177 ~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~--- 249 (276)
+.+.||.+.++|. +++....... .......+ .....+.+++..++..+..+.+.+.|+.++. .+..+.....
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~ 260 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRK 260 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccc
Confidence 4444899999999 6443100000 00011112 1234566666555555578899999987553 2233321000
Q ss_pred ----CCCceEEEEECCCCcEEEEecC
Q 023822 250 ----SRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 250 ----~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
.......++++||++.|+++..
T Consensus 261 ~~~~~p~g~~~~~~s~d~~~lyV~~~ 286 (373)
T 2mad_H 261 ADTWRPGGWQQVAYLKSSDGIYLLTS 286 (373)
T ss_pred ccceecCceEeEEECCCCCEEEEEec
Confidence 1122445789999988877653
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=1.8e-11 Score=95.34 Aligned_cols=194 Identities=9% Similarity=0.159 Sum_probs=130.1
Q ss_pred CCCcEEEEEEcCC-CCEEEEeecCCeEEEEEccCCeeeee-eee----eeeceEEEEEeccCCeEEEeccCCCC------
Q 023822 33 YNGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKT-INS----KKYGVDLVCFTSHPTTVIYSSKNGWD------ 100 (276)
Q Consensus 33 h~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~~~~d------ 100 (276)
+...+.+++++++ ++++++. ..+.|.+||.+ ++.... ... ....+..+++.++++..++... +
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---~~~~~~~ 143 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA---GEVAPAD 143 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECB---CBCTTSC
T ss_pred CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecC---ccccccc
Confidence 4567899999999 6655544 34479999988 665433 221 1235789999999987766553 3
Q ss_pred ---------CceEEEEccCCceeeeecccCcceEEEEec----cCCCEEEEe-eCCCeEEEEecc-Cceee--eeE---e
Q 023822 101 ---------ESLRLLSLHDNKYLRYFKGHHDRVVSLSLC----SSKDCFISG-SLDRTVLLWDQR-AEKCQ--GLL---R 160 (276)
Q Consensus 101 ---------~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~i~iwd~~-~~~~~--~~~---~ 160 (276)
+.|..|+.. ++... +..+......++|+ |+++.++.+ ..++.|.+||++ .++.. ..+ .
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~ 221 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP 221 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC
T ss_pred ccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC
Confidence 567777765 44333 32334456889999 999755444 567899999986 34321 111 1
Q ss_pred e---cCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEe-ecCCcEEEEEC
Q 023822 161 V---QGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDS 235 (276)
Q Consensus 161 ~---~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~ 235 (276)
. .....++++++++++++.. ++.|.+||.++++. ......+...+.+++|+|+|+.|+++ ..++.|..|++
T Consensus 222 ~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 222 GTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP----KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC----SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE----eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 1 2245789999999888875 78999999875443 22223344678999999999955544 45688999997
Q ss_pred CC
Q 023822 236 FR 237 (276)
Q Consensus 236 ~~ 237 (276)
..
T Consensus 298 ~~ 299 (314)
T 1pjx_A 298 QR 299 (314)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 222
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.48 E-value=3.1e-11 Score=93.45 Aligned_cols=188 Identities=14% Similarity=0.138 Sum_probs=122.0
Q ss_pred CCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee----eeeceEEEEEeccCCeEEEeccCCC------CCc
Q 023822 33 YNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS----KKYGVDLVCFTSHPTTVIYSSKNGW------DES 102 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~------d~~ 102 (276)
....+.+++++++|+++++ . ++.|.+||.++++....... ....+..+++.|+++..++...... ...
T Consensus 52 ~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 3567999999999995554 3 56799999988765433221 1245789999999986665432100 122
Q ss_pred eEEEEccCCceeeeecccCcceEEEEeccCCCEE-EEeeCCCeEEEEecc--Cceee--eeE-e----ecCCCeeEecCC
Q 023822 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCF-ISGSLDRTVLLWDQR--AEKCQ--GLL-R----VQGRPAAAYDDQ 172 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~--~~~~~--~~~-~----~~~~~~~~~~~~ 172 (276)
-.+|.+........+..+......++|+|+++.| ++.+.++.|.+||+. ++... ..+ . ......++++++
T Consensus 130 ~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 130 GALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp EEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred cEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 3455544322223333344456889999999865 455567899999973 44321 112 1 122457899999
Q ss_pred CcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEEC-CCCcEEEEeec
Q 023822 173 GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS-NDGRLMLLTTM 226 (276)
Q Consensus 173 ~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~ 226 (276)
|++.++.. ++.|..||..+++. ...+..+...+++++|. |+++.|++++.
T Consensus 210 G~lwva~~~~~~v~~~d~~tG~~----~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 210 GKLWVACYNGGRVIRLDPVTGKR----LQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SCEEEEEETTTEEEEECTTTCCE----EEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCEEEEEcCCCEEEEEcCCCceE----EEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 98888877 68899999986553 33344444578999998 88877766554
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=4.1e-11 Score=96.86 Aligned_cols=183 Identities=13% Similarity=0.119 Sum_probs=122.4
Q ss_pred ceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCC--eEEEEeccCcee
Q 023822 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKC 155 (276)
Q Consensus 78 ~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~ 155 (276)
....++|+++++.+++... ++.|+.||..+++....... ..... ++|+++++.|+++..++ .|.+++......
T Consensus 132 ~P~~la~d~~g~lyv~d~~---~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRD---DPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETT---TTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecC---CCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 5778999998886555554 78999999988776554443 23334 99999999888888766 799999876554
Q ss_pred eeeE------eecCCCeeEecC-CCcEEEEeeCCeEEEEecccCCCCCeeeee---ecCCCCC--ceEEEECCC-CcEEE
Q 023822 156 QGLL------RVQGRPAAAYDD-QGLVFAVAFGGYIRMFDARKYEKGPFDIFS---VGGDISD--ANVVKFSND-GRLML 222 (276)
Q Consensus 156 ~~~~------~~~~~~~~~~~~-~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~---~~~~~~~--i~~~~~~~~-~~~l~ 222 (276)
...+ .......++++| ++.++++..++.|+.||..+... .... ....... ...++|+|+ +.+++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~---~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV---TLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE---EEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE---EEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 3333 334567899999 66666644478999999886442 1220 1112111 239999995 66566
Q ss_pred EeecCCcEEEEECCCCcEEEEeecCC---C---------CCCceEEEEECCCCcEEEEec
Q 023822 223 LTTMEGHIHVLDSFRGTLLSTYNVKP---V---------SRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 223 ~~~~dg~i~i~d~~~~~~~~~~~~~~---~---------~~~~v~~~~~s~~g~~l~~~~ 270 (276)
+-..++.|+.|+... +. ..+.... + .-.....++++|+|+++++-.
T Consensus 284 ~d~~~~~I~~~~~~g-~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 284 SDQNLSSVYKITPDG-EC-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp EETTTTEEEEECTTC-CE-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred EeCCCCEEEEEecCC-CE-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 666778999999653 32 2332110 0 023478999999999776655
No 224
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=2.8e-10 Score=86.61 Aligned_cols=219 Identities=7% Similarity=0.017 Sum_probs=138.4
Q ss_pred CcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce
Q 023822 35 GRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~ 113 (276)
..+..++|++++..|+ +-..++.|..+++........+.........+++.+++..++++... .+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCE
Confidence 4567899999766555 44457899999987654333332222467899999987777776652 78899999865432
Q ss_pred eeeecccCcceEEEEeccCCCEEEEeeC---CCeEEEEeccCceeeeeE---eecCCCeeEecCCCcEEEEee--CCeEE
Q 023822 114 LRYFKGHHDRVVSLSLCSSKDCFISGSL---DRTVLLWDQRAEKCQGLL---RVQGRPAAAYDDQGLVFAVAF--GGYIR 185 (276)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~--d~~i~ 185 (276)
.............++++|++..|+.+.. .+.|..+++.... ...+ .......+++++++..|..+. .+.|.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 2222222245689999997665554443 3688888876433 2222 122345789999765444444 68999
Q ss_pred EEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc
Q 023822 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (276)
Q Consensus 186 ~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 264 (276)
++|...... ...... ......++.. ++.++++....+.|..+|..+++.+..+.. +.......+++.|++.
T Consensus 193 ~~~~~g~~~----~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~--g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 193 CLNPAQPGR----RKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHP--HKQTRLYGITIALSQC 263 (267)
T ss_dssp EEETTEEEE----EEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECC--SSCCCCCCEEEECSCC
T ss_pred EEecCCCce----EEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcc--ccccccceeeecCccC
Confidence 999875321 111111 2234566654 344444444568999999999999888862 1122467788888864
No 225
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.44 E-value=6.9e-11 Score=92.65 Aligned_cols=209 Identities=12% Similarity=0.104 Sum_probs=144.7
Q ss_pred CCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceE
Q 023822 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 125 (276)
Q Consensus 46 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~ 125 (276)
+..|..++.++.+..+|.. ++...........+..+...+++. +.+++. ++.|..+|.. ++....+......+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~---~~~l~~~d~~-g~~~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSN---DNYLYAINPD-GTEKWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECT---TSEEEEECTT-SCEEEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcC---CCEEEEECCC-CCEeEEEecCCCcee
Confidence 4567778888999999988 776666655555566666666665 555655 7999999998 777766665566677
Q ss_pred EEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeec
Q 023822 126 SLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG 203 (276)
Q Consensus 126 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~ 203 (276)
++...+++.+++. + +.|..+| .+++...... ...+.++...+++.+.+++.++.+..+|... +. .....
T Consensus 181 ~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g-~~----~~~~~ 251 (330)
T 3hxj_A 181 AASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPDG-TE----KWRFK 251 (330)
T ss_dssp CCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTTS-CE----EEEEE
T ss_pred eeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCCC-CE----eEEee
Confidence 7777777775544 4 7899999 6665554442 2346678888998888888788899887432 21 22222
Q ss_pred CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 204 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 204 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.....+..+.+.+++. |+.++.+|.|..+|. +++.+..+. .....+.++...++|+ |..++.+|.+
T Consensus 252 ~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~---~~~~~~~~~~~d~~g~-l~~gt~~G~~ 317 (330)
T 3hxj_A 252 TGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFE---TGSWIIATPVIDENGT-IYFGTRNGKF 317 (330)
T ss_dssp CSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEE---CSSCCCSCCEECTTCC-EEEECTTSCE
T ss_pred CCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEE---cCCccccceEEcCCCE-EEEEcCCCeE
Confidence 2333345566776765 667778888999995 788777776 3445677778878886 4557777764
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=1.2e-10 Score=90.51 Aligned_cols=191 Identities=11% Similarity=0.063 Sum_probs=124.2
Q ss_pred eeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEE
Q 023822 69 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLW 148 (276)
Q Consensus 69 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw 148 (276)
+..+...........|+++++.|+..... ++.|..|+. +++ ...+..+...+..++++++|+++++...++.|.+|
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~--~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLV--GRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETT--TTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECC--CCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEE
Confidence 33343344456788999999965555432 789999998 444 34555566778999999999976665566889999
Q ss_pred eccCceeeeeE------eecCCCeeEecCCCcEEEE----ee--------------CCeEEEEecccCCCCCeeeeeecC
Q 023822 149 DQRAEKCQGLL------RVQGRPAAAYDDQGLVFAV----AF--------------GGYIRMFDARKYEKGPFDIFSVGG 204 (276)
Q Consensus 149 d~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~----~~--------------d~~i~~~d~~~~~~~~~~~~~~~~ 204 (276)
|.. ++..... ....+..++++++|+++++ +. .+.|+.||..+++.. ...
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~---~~~--- 185 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ---RMA--- 185 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE---EEE---
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE---EEe---
Confidence 986 4432222 1234567999999998885 22 256777777654431 111
Q ss_pred CCCCceEEEECCCCcEEEEeecC------CcEEEEECCCCcEE--EEeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 205 DISDANVVKFSNDGRLMLLTTME------GHIHVLDSFRGTLL--STYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 205 ~~~~i~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.......++|+|+++.|+.+... +.|.+|++..+... ..+.. ...+.+..++++++|++.++. .+|
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~--~~~~~pdgi~~d~~G~lwv~~-~~g 259 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS--VPDGLPDGFCVDRGGWLWSSS-GTG 259 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC--CSSSCCCSEEECTTSCEEECC-SSE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE--CCCCCCCeEEECCCCCEEEec-CCc
Confidence 22356789999999988777655 68999998765421 11211 123445678889999854443 443
No 227
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.43 E-value=1.1e-09 Score=85.70 Aligned_cols=229 Identities=10% Similarity=0.082 Sum_probs=145.8
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee--------------------eeeceEEEEEeccCCeEEEe
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--------------------KKYGVDLVCFTSHPTTVIYS 94 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~ 94 (276)
....+++|.++++++.++..++.|..|+..+++.. .+.. ....+..+++.+++..|+++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 34567899999987888888999999998765432 2211 11247889998744456666
Q ss_pred ccCCCCCceEEEEccCCceeeeecc-----cCcceEEEEecc-CCCEEEEeeC-----------------CCeEEEEecc
Q 023822 95 SKNGWDESLRLLSLHDNKYLRYFKG-----HHDRVVSLSLCS-SKDCFISGSL-----------------DRTVLLWDQR 151 (276)
Q Consensus 95 ~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~ 151 (276)
.. .+.|..+|..+++. ..+.. .......+++.+ +|+++++-.. ++.|..||..
T Consensus 98 d~---~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 98 DC---YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp ET---TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EC---CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 54 44588888765532 22211 113467899999 8986665432 3678999987
Q ss_pred CceeeeeE-eecCCCeeEecCCCcEEEEee--CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeec--
Q 023822 152 AEKCQGLL-RVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM-- 226 (276)
Q Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 226 (276)
+++..... .......++++|+++.+..+. .+.|.+|++..........+.. ... ...+++.++|+++++...
T Consensus 174 ~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 174 TKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp TTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEEET
T ss_pred CCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecCcc
Confidence 76644333 334566899999997555543 6899999987533222222221 223 778999999987666544
Q ss_pred --------CCcEEEEECCCCcEEEEeecCCCC-CCceEEEEECCCCcEEEEecCCC
Q 023822 227 --------EGHIHVLDSFRGTLLSTYNVKPVS-RNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 227 --------dg~i~i~d~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.+.|..+|. .++.+..+....+. -..+..+++ .+++++++...++
T Consensus 251 ~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~ 304 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHG 304 (322)
T ss_dssp TSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCS
T ss_pred cccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCC
Confidence 467888985 58887777632211 245666766 4566555544443
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.42 E-value=6.5e-11 Score=101.66 Aligned_cols=215 Identities=13% Similarity=0.141 Sum_probs=145.4
Q ss_pred CEEEEeec------CCeEEEEEccCCeeeeeeeeeee--------------------------------ceEEEEEeccC
Q 023822 47 SYLVTASD------DESIRLYDVTAATCLKTINSKKY--------------------------------GVDLVCFTSHP 88 (276)
Q Consensus 47 ~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~~~ 88 (276)
..++.++. ++.|+.+|..+|+.+..+..... ....+++.+++
T Consensus 175 ~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~ 254 (677)
T 1kb0_A 175 GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL 254 (677)
T ss_dssp TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT
T ss_pred CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC
Confidence 45555543 68999999999998876643211 11357888888
Q ss_pred CeEEEeccCC----------------CCCceEEEEccCCceeeeecc--cC-------cceEEEEeccCC---CEEEEee
Q 023822 89 TTVIYSSKNG----------------WDESLRLLSLHDNKYLRYFKG--HH-------DRVVSLSLCSSK---DCFISGS 140 (276)
Q Consensus 89 ~~l~~~~~~~----------------~d~~i~~~d~~~~~~~~~~~~--~~-------~~i~~~~~~~~~---~~l~~~~ 140 (276)
..++++..++ +-+.|..+|..+++.+..++. |. .....+....+| +.++.++
T Consensus 255 ~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~ 334 (677)
T 1kb0_A 255 NTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP 334 (677)
T ss_dssp TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC
T ss_pred CEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC
Confidence 8888877521 012599999999998887653 21 112223333467 6789999
Q ss_pred CCCeEEEEeccCceeeeeEeecCC-------------------------------------CeeEecCCCcEEEEee-C-
Q 023822 141 LDRTVLLWDQRAEKCQGLLRVQGR-------------------------------------PAAAYDDQGLVFAVAF-G- 181 (276)
Q Consensus 141 ~d~~i~iwd~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~l~~~~-d- 181 (276)
.+|.++++|.++++.+..+....+ ..++++|+..++.+.. +
T Consensus 335 ~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~ 414 (677)
T 1kb0_A 335 KNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNV 414 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEEC
T ss_pred CCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhc
Confidence 999999999999988765532211 1467888876665532 1
Q ss_pred ------------------------------------------CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCc
Q 023822 182 ------------------------------------------GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR 219 (276)
Q Consensus 182 ------------------------------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (276)
+.|..||+.+++. ..... +..++....+...+.
T Consensus 415 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~----~W~~~-~~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 415 PVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA----AWSVE-HVSPWNGGTLTTAGN 489 (677)
T ss_dssp CCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE----EEEEE-ESSSCCCCEEEETTT
T ss_pred ceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE----EeecC-CCCCCcCcceEeCCC
Confidence 6799999988664 33322 223445556677788
Q ss_pred EEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 220 LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 220 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
.++.++.||.+++||..+++.+..+.... ...-.-+.|.++|+.+++
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~~--~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEKLWEAPTGT--GVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSS--CCCSCCEEEEETTEEEEE
T ss_pred EEEEECCCCcEEEEECCCCceeeeeeCCC--CcccCCEEEEeCCEEEEE
Confidence 88889999999999999999999998432 222233566788864433
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.41 E-value=5.4e-10 Score=89.33 Aligned_cols=188 Identities=13% Similarity=0.130 Sum_probs=128.1
Q ss_pred EEEEEEcCCCCEEEEeecC------CeEEEEEccCCeeeeeeeeeeec---eEEEEEeccCCeEEEeccC----------
Q 023822 37 ISSMDFHKSSSYLVTASDD------ESIRLYDVTAATCLKTINSKKYG---VDLVCFTSHPTTVIYSSKN---------- 97 (276)
Q Consensus 37 v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~~---------- 97 (276)
-..+...|+| +++++..+ +.|.+.|.++++.+.++.....+ -..+.|+|+++.++++.-.
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~ 218 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLK 218 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCC
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccc
Confidence 4457788999 66666555 78999999999999888643222 3458889999988888410
Q ss_pred ------CCCCceEEEEccCCceeeeeccc-C-cceEEEEe--ccCCCEEEEee------CCCeEEEEeccCcee--eeeE
Q 023822 98 ------GWDESLRLLSLHDNKYLRYFKGH-H-DRVVSLSL--CSSKDCFISGS------LDRTVLLWDQRAEKC--QGLL 159 (276)
Q Consensus 98 ------~~d~~i~~~d~~~~~~~~~~~~~-~-~~i~~~~~--~~~~~~l~~~~------~d~~i~iwd~~~~~~--~~~~ 159 (276)
....+|.+||+.+++.+.++... . .....+.| +|+++++++++ .+++|.+|....++. .+.+
T Consensus 219 ~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vI 298 (462)
T 2ece_A 219 LEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVI 298 (462)
T ss_dssp TTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEE
T ss_pred hhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEE
Confidence 12689999999998887777642 1 23445555 99999777666 456887766544321 1111
Q ss_pred ---e-----------------ecCCCeeEecCCCcEEEEee--CCeEEEEecccCCCCC-eeeeeecCC-----------
Q 023822 160 ---R-----------------VQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKGP-FDIFSVGGD----------- 205 (276)
Q Consensus 160 ---~-----------------~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~~-~~~~~~~~~----------- 205 (276)
. ......+.+++++++|.++. .+.|.+||+....... .......+.
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCC
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccccccc
Confidence 0 13356789999999999888 6999999986432211 112222211
Q ss_pred -CCCceEEEECCCCcEEEEee
Q 023822 206 -ISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 206 -~~~i~~~~~~~~~~~l~~~~ 225 (276)
......++++|+|++|+++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 01368899999999999887
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=1.9e-10 Score=90.87 Aligned_cols=200 Identities=10% Similarity=0.051 Sum_probs=133.1
Q ss_pred cCCCcEEEEEEcCCCCEEEEeec-----CCeEEEEEccCCeeeeeeeee------eeceEEEEEeccCCeEEEeccC-CC
Q 023822 32 DYNGRISSMDFHKSSSYLVTASD-----DESIRLYDVTAATCLKTINSK------KYGVDLVCFTSHPTTVIYSSKN-GW 99 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~-~~ 99 (276)
+|...+..++++++++++++-.. ++.|.+||+.+++.+..+... ...+..+++.+++..++++... +.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45678999999999886665543 578999999999877766532 2346889999876666554320 01
Q ss_pred CCceEEEEccCCceeeeecccC-----------------------------cceEEEEeccCCCEEEEeeCCC-eEEEEe
Q 023822 100 DESLRLLSLHDNKYLRYFKGHH-----------------------------DRVVSLSLCSSKDCFISGSLDR-TVLLWD 149 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~~~~-----------------------------~~i~~~~~~~~~~~l~~~~~d~-~i~iwd 149 (276)
++.|.+||+.+++..+.+..|. ..+..++|+|+++.|+.+..++ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 7899999998877655553321 2357899999999888877665 555555
Q ss_pred ccC---c-----eee---eeE-eecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECC
Q 023822 150 QRA---E-----KCQ---GLL-RVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSN 216 (276)
Q Consensus 150 ~~~---~-----~~~---~~~-~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 216 (276)
... + +.. ... .......+++++++.++++.. ++.|.+||..+++ ............+.+++|.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~---~~~~~~~~~~~~p~~va~~~ 300 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA---YKLLVTDEKLSWTDSFNFGS 300 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE---EEEEEECGGGSCEEEEEECT
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC---EEEEEECCceecCCeeEECC
Confidence 321 1 000 111 222455799999998888877 7999999984432 11222112244678999999
Q ss_pred CCcEEEEeecCCcEEEEE
Q 023822 217 DGRLMLLTTMEGHIHVLD 234 (276)
Q Consensus 217 ~~~~l~~~~~dg~i~i~d 234 (276)
+|+++++.+..+.+.+|.
T Consensus 301 ~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 301 DGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp TSCEEEEECCGGGSGGGB
T ss_pred CCcEEEEeCccccccccc
Confidence 998887776655554443
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.39 E-value=2.5e-10 Score=98.27 Aligned_cols=205 Identities=11% Similarity=0.116 Sum_probs=138.3
Q ss_pred CCeEEEEEccCCeeeeeeeeee-------------------------------eceEEEEEeccCCeEEEeccCCCCC--
Q 023822 55 DESIRLYDVTAATCLKTINSKK-------------------------------YGVDLVCFTSHPTTVIYSSKNGWDE-- 101 (276)
Q Consensus 55 d~~i~iwd~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~~~~d~-- 101 (276)
++.|+.||..+|+.+-.+.... .....+++.|+...++++.. ++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~---~g~~ 258 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVG---NGSL 258 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECC---CEES
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCC---CCCc
Confidence 6899999999999877664210 01125788888888888876 44
Q ss_pred -----------------ceEEEEccCCceeeeecc--cC-------cceEEEEeccCCC---EEEEeeCCCeEEEEeccC
Q 023822 102 -----------------SLRLLSLHDNKYLRYFKG--HH-------DRVVSLSLCSSKD---CFISGSLDRTVLLWDQRA 152 (276)
Q Consensus 102 -----------------~i~~~d~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~~~~~d~~i~iwd~~~ 152 (276)
.|..+|..+++.+..++. |. .+........+|+ .++.++.+|.++++|.++
T Consensus 259 w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 338 (689)
T 1yiq_A 259 WDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT 338 (689)
T ss_dssp SCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred cccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC
Confidence 499999999999887754 21 1122222223554 788999999999999999
Q ss_pred ceeeeeEeecC-----------------------------------------CCeeEecCCCcEEEEee-----------
Q 023822 153 EKCQGLLRVQG-----------------------------------------RPAAAYDDQGLVFAVAF----------- 180 (276)
Q Consensus 153 ~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~l~~~~----------- 180 (276)
++.+....... -..++++|+..++.+..
T Consensus 339 G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 418 (689)
T 1yiq_A 339 GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP 418 (689)
T ss_dssp CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCS
T ss_pred CCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecc
Confidence 98763321111 01368888876666541
Q ss_pred -----------------------------------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee
Q 023822 181 -----------------------------------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 181 -----------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
++.|..||+.+++. ......+ .+...-.+...+.+++.++
T Consensus 419 ~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~----~W~~~~~-~~~~~g~~~tagglvf~gt 493 (689)
T 1yiq_A 419 EAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA----AWEVPYV-TIFNGGTLSTAGNLVFEGS 493 (689)
T ss_dssp SCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE----EEEEEES-SSCCCCEEEETTTEEEEEC
T ss_pred ccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe----EeEccCC-CCccCccceECCCEEEEEC
Confidence 26789999988764 3333222 2333345666778899999
Q ss_pred cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc-EEEEe
Q 023822 226 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISG 269 (276)
Q Consensus 226 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~ 269 (276)
.||.++.||.++|+.+.++.... .....-+.|..+|+ |+++.
T Consensus 494 ~dg~l~a~D~~tG~~lw~~~~~~--~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 494 ADGRVIAYAADTGEKLWEQPAAS--GVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp TTSEEEEEETTTCCEEEEEECSS--CCCSCCEEEEETTEEEEEEE
T ss_pred CCCcEEEEECCCCccceeeeCCC--CcccCceEEEECCEEEEEEE
Confidence 99999999999999999887422 22223366778886 44443
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.39 E-value=3.9e-10 Score=84.75 Aligned_cols=205 Identities=9% Similarity=0.039 Sum_probs=138.4
Q ss_pred cccceeeccCCC--cEEEEEEcCCCCEEEEeec--CCeEEEEEccCCeeeeeeeeeee-ceEEEEEeccCCeEEEeccCC
Q 023822 24 MEVGMSFRDYNG--RISSMDFHKSSSYLVTASD--DESIRLYDVTAATCLKTINSKKY-GVDLVCFTSHPTTVIYSSKNG 98 (276)
Q Consensus 24 ~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~ 98 (276)
++.+.++. |.. ....++|++++.+.++.+. ++.|.++|+.+++.+..+..... ....+++ +++.+..+...
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~- 84 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWL- 84 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETT-
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEec-
Confidence 34445553 443 3578999998755554443 57999999999999888753221 1223444 46677766653
Q ss_pred CCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec-------CCCeeEecC
Q 023822 99 WDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-------GRPAAAYDD 171 (276)
Q Consensus 99 ~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~ 171 (276)
++.+.++|..+.+.+.++...... ...+++|++.++++..+++|.++|..+.+....+... ..+.+.+.
T Consensus 85 -~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 -KNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp -CSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred -CCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 899999999999988887533122 2335568887777777899999999998888777322 13356677
Q ss_pred CCcEEEEee-CCeEEEEecccCCCCCeeeeeecC-----------CCCCceEEEECCCCcEE-EEeecCCcEEEEECCCC
Q 023822 172 QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGG-----------DISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRG 238 (276)
Q Consensus 172 ~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~ 238 (276)
++++++... ++.|.+.|..+++. .....+.+ .....+.++|+|+++.+ +++...+.|...++...
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V--~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTL--LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCE--EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEecCCCCeEEEEECCCCcE--EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 677766665 79999999998663 22222211 11345899999998655 55556788888887554
No 233
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.39 E-value=3.3e-10 Score=84.17 Aligned_cols=196 Identities=11% Similarity=0.113 Sum_probs=126.1
Q ss_pred eeeeeeeeee--ceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEe-eCCCe
Q 023822 68 CLKTINSKKY--GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISG-SLDRT 144 (276)
Q Consensus 68 ~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~ 144 (276)
.+.++ .|.. -...+.|+ ++..+.+.+..+ ...|+.+|+.+++.+..+.-. .........++++.|... -.++.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g-~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNG-RSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETT-EEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCC-CceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCE
Confidence 44555 3332 24788888 554444444411 248999999999998877543 333332233344544444 45889
Q ss_pred EEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCC---CCceEEEECCCCcE
Q 023822 145 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDI---SDANVVKFSNDGRL 220 (276)
Q Consensus 145 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~ 220 (276)
+.+||..+.+.+..+.... ....+++++..|..+. ++.|.++|..+.+.. ......... ..++.+.|. +|+.
T Consensus 109 v~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~--~~I~V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPV--RTITVTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEE--EEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEE--EEEEeccCCccccccceeEEE-CCEE
Confidence 9999999999999885433 3344445666555555 788999999886531 122221112 234557776 7775
Q ss_pred EEEeecCCcEEEEECCCCcEEEEeecCC---------CCCCceEEEEECCCCcEEEEecC
Q 023822 221 MLLTTMEGHIHVLDSFRGTLLSTYNVKP---------VSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 221 l~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
.+..-.++.|.+.|..+++.+..+.... ....-.+.++|+|+++.|++.+.
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 5555568899999999999999887421 01235689999999887776654
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.38 E-value=6e-10 Score=83.71 Aligned_cols=199 Identities=13% Similarity=0.064 Sum_probs=127.3
Q ss_pred eeeeeeeeee-eceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCc-ceEEEEeccCCCEEEEeeCCCe
Q 023822 67 TCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHD-RVVSLSLCSSKDCFISGSLDRT 144 (276)
Q Consensus 67 ~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~~ 144 (276)
+.+.++.... .....+.|++++ .|+.++....++.|.++|+.+++.+..+.-... ....+++.. +..+++.-.++.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence 4455553322 235789999886 555543211168999999999998887652221 223455542 234445556889
Q ss_pred EEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCC---CCceEEEECCCCcE
Q 023822 145 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDI---SDANVVKFSNDGRL 220 (276)
Q Consensus 145 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~ 220 (276)
+.++|..+.+.+..+.........++++++.+..+. ++.|.++|..+.+. .......... ..++.+.|. +|+.
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v--~~~I~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKL--IKKHNVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcE--EEEEEECCCCcccccceeEEEE-CCEE
Confidence 999999999998888544123455666765444444 79999999988553 1122221111 235678887 7765
Q ss_pred EEEeecCCcEEEEECCCCcEEEEeecCC----------CCCCceEEEEECCCCcEEEEec
Q 023822 221 MLLTTMEGHIHVLDSFRGTLLSTYNVKP----------VSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 221 l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
++....++.|.+.|..+++.+..+.... ......+.++|+|+++.|++++
T Consensus 165 yvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 165 WANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 5555567899999999999999887310 0113568999999987655544
No 235
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.36 E-value=8.6e-09 Score=80.02 Aligned_cols=237 Identities=12% Similarity=0.018 Sum_probs=141.4
Q ss_pred ccceeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCC-Cce
Q 023822 25 EVGMSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-ESL 103 (276)
Q Consensus 25 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d-~~i 103 (276)
+....+... .....++|+++++++++...++.|..||... +....+.. ......+++.++++.+++.... + ..|
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~--~~~~v 97 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNA--DSIPV 97 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECT--TSCEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccC--CcceE
Confidence 334444332 4577899999998777766789999999764 33333322 3468889999999855544320 2 246
Q ss_pred EEEEccCCceeeeecc-cCcceEEEEeccCCCEEEEeeCCCeEEEEeccCcee-eeeE-----------eecCCCeeEec
Q 023822 104 RLLSLHDNKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLL-----------RVQGRPAAAYD 170 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~-----------~~~~~~~~~~~ 170 (276)
..++..+++....... .......++..+++..+++-..++.|..+|...++. +... .......+ +
T Consensus 98 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp EEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred EEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 6677777765332221 122234455555554455544688999999875421 1100 00111223 7
Q ss_pred CCCcEEEEee--CCeEEEEeccc-CCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC
Q 023822 171 DQGLVFAVAF--GGYIRMFDARK-YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 247 (276)
Q Consensus 171 ~~~~~l~~~~--d~~i~~~d~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 247 (276)
+++..|..+. .+.|..|++.. +.......+.. ......++++++|+++++....+.|.+++.. ++........
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~ 251 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE 251 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc
Confidence 7776555554 68999999875 22111112111 1346779999999877776677899999964 6653321111
Q ss_pred CCCCCceEEEEEC---CCCcEEEEecCCC
Q 023822 248 PVSRNSTLEASFS---PEGMFVISGRVSP 273 (276)
Q Consensus 248 ~~~~~~v~~~~~s---~~g~~l~~~~~dg 273 (276)
.....+++++|. |+++.|+.++..+
T Consensus 252 -~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 -QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -cccCCceEEEEecccCCCCEEEEECCCC
Confidence 123568899999 8987776665443
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.36 E-value=7.5e-10 Score=86.82 Aligned_cols=184 Identities=11% Similarity=0.031 Sum_probs=117.9
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee----eeeceEEEEEeccCCeEEEeccCC---CCCceEEE
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS----KKYGVDLVCFTSHPTTVIYSSKNG---WDESLRLL 106 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~---~d~~i~~~ 106 (276)
...+.+++|+++++++++. .+ .|.+||..+++....... ....+..+.+.|+++.+++..... ..+.|..+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 4679999999999877754 44 499999887765432221 124688999999998665543200 02455555
Q ss_pred EccCCceeeeecccCcceEEEEeccCCCEEEEe-eCCCeEEEEecc--Cc-eee--eeE-e----ecCCCeeEecCCCcE
Q 023822 107 SLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISG-SLDRTVLLWDQR--AE-KCQ--GLL-R----VQGRPAAAYDDQGLV 175 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~iwd~~--~~-~~~--~~~-~----~~~~~~~~~~~~~~~ 175 (276)
+ +++.. .+..+......++|+|+++.++.+ +.++.|.+||+. ++ ... ..+ . ......+++++++.+
T Consensus 167 ~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l 243 (326)
T 2ghs_A 167 A--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI 243 (326)
T ss_dssp E--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred e--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE
Confidence 5 44433 333333456789999999866544 557899999986 44 211 112 1 112346889999988
Q ss_pred EEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEEC-CCCcEEEEeecC
Q 023822 176 FAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS-NDGRLMLLTTME 227 (276)
Q Consensus 176 l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~d 227 (276)
+++.. ++.|.+||.. ++. ...+..+...+.+++|+ |+++.|++++..
T Consensus 244 wva~~~~~~v~~~d~~-g~~----~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 244 WNARWGEGAVDRYDTD-GNH----IARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEETTTEEEEECTT-CCE----EEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEEeCCCEEEEECCC-CCE----EEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 87776 6889999984 221 22333344568999998 888777665443
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.34 E-value=7.4e-10 Score=82.32 Aligned_cols=192 Identities=12% Similarity=0.123 Sum_probs=131.3
Q ss_pred cccceeeccCCCc--EEEEEEcCCCCEEEEeecCC--eEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCC
Q 023822 24 MEVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (276)
Q Consensus 24 ~~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 99 (276)
++.++++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++.+..+.... ........++++.+..+...
T Consensus 31 ~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~-- 105 (262)
T 3nol_A 31 YQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWK-- 105 (262)
T ss_dssp EEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESS--
T ss_pred eEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEee--
Confidence 4555666 34443 4788998 666667777766 89999999999988876543 33333344456677666542
Q ss_pred CCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec----C---CCeeEecCC
Q 023822 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----G---RPAAAYDDQ 172 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~----~---~~~~~~~~~ 172 (276)
++.+.+||..+.+.+.++.... .-..+ +++++.|+.+..+++|.++|..+.+....+... + .+.+.+. +
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECccCcEEEEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 8999999999999998887432 22333 457777777777889999999998888777321 2 2236665 6
Q ss_pred CcEEEEee-CCeEEEEecccCCCCCeeeeeec----------CCCCCceEEEECCCCcEEEEeec
Q 023822 173 GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVG----------GDISDANVVKFSNDGRLMLLTTM 226 (276)
Q Consensus 173 ~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~l~~~~~ 226 (276)
|++++... ++.|.+.|.++++.. ....+. ......+.|+|+|+++.|++.+.
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~--~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVT--GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEE--EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEEccCCeEEEEECCCCcEE--EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 77777665 789999999887631 122221 11234688999998877776664
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.27 E-value=3.2e-09 Score=78.93 Aligned_cols=181 Identities=10% Similarity=0.079 Sum_probs=119.0
Q ss_pred eEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEE--EEeccCCCEEEEeeCCCeEEEEeccCceee
Q 023822 79 VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVS--LSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156 (276)
Q Consensus 79 v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~--~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 156 (276)
...+.|+ +..|..+... +|.|+.+|+.+++.+..+ -...... +++.. +++++..-.++.+.+||..+.+.+
T Consensus 57 tqGL~~~--~~~Ly~stG~--~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGH--QGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEE--TTEEEEEETT--TTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEE--CCEEEEEcCC--CCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEE
Confidence 4678886 3444444431 788999999999988877 2233333 44432 234444556889999999999999
Q ss_pred eeEeecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCC---CceEEEECCCCcEEEEeecCCcEEE
Q 023822 157 GLLRVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDIS---DANVVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~i 232 (276)
..+...+ ....+.+++..|..+. ++.|.++|..+.+. ........+.. .++.+.|. +|+.++..-.+..|.+
T Consensus 130 ~ti~~~~-eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v--~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 130 RTTRYSG-EGWGLCYWNGKLVRSDGGTMLTFHEPDGFAL--VGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEEECSS-CCCCEEEETTEEEEECSSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EEEeCCC-ceeEEecCCCEEEEECCCCEEEEEcCCCCeE--EEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence 9885432 2234445566555555 89999999988653 11222222222 34567776 7765555556789999
Q ss_pred EECCCCcEEEEeecC----------CCCCCceEEEEECCCCcEEEEec
Q 023822 233 LDSFRGTLLSTYNVK----------PVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 233 ~d~~~~~~~~~~~~~----------~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
.|..+++.+..+... .....-.+.|+|+|+++.|+..+
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999999988732 01224578999999876665554
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.27 E-value=7.4e-09 Score=76.32 Aligned_cols=197 Identities=11% Similarity=0.103 Sum_probs=124.1
Q ss_pred eeeeeeeeee--eceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcce-EEEEeccCCCEEEEeeCCC
Q 023822 67 TCLKTINSKK--YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRV-VSLSLCSSKDCFISGSLDR 143 (276)
Q Consensus 67 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~ 143 (276)
+.+.++ .|. .-...+.|++ ..|..++.......|+.+|+.+++.+..+.-..... -.+++. .++.+...-.++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCC
Confidence 344455 343 3366888875 344444331114589999999999988775332211 233433 233444555688
Q ss_pred eEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCC---CCceEEEECCCCc
Q 023822 144 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDI---SDANVVKFSNDGR 219 (276)
Q Consensus 144 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~ 219 (276)
.+.+||..+.+.+..+.... ....+.+++..|..+. ++.|.++|..+.+. ........+. ..++.+.+. +|+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~--~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQ--VGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEEEECSSCEEEECSSSEEEEECTTTCCE--EEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEEeeCCCEEEEECCCCeEEEEeCCCCeE--EEEEEEccCCcccccceeeEEe-CCE
Confidence 99999999999999885433 2334445555444444 89999999988653 1122222222 234556665 677
Q ss_pred EEEEeecCCcEEEEECCCCcEEEEeecCC----------CCCCceEEEEECCCCcEEEEecC
Q 023822 220 LMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------VSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 220 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
.++..-.+..|.+.|..+++.+..+.... ....-.+.++++|+++.|++.+.
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 55555567899999999999999887321 12245789999998877666543
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.27 E-value=4.1e-10 Score=88.20 Aligned_cols=213 Identities=13% Similarity=0.095 Sum_probs=135.5
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
..+.++...+++. |..++.+ +..+|. +++....+...........+. +..+.+++. ++.|..+|.. ++..
T Consensus 60 ~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~---~~~l~~~d~~-g~~~ 129 (330)
T 3hxj_A 60 IIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSM---DGHLYAINTD-GTEK 129 (330)
T ss_dssp EEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECT---TSEEEEECTT-SCEE
T ss_pred CcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEec---CCEEEEEcCC-CCEE
Confidence 3456677766665 4445444 888885 565544443333223333333 566777776 8899999988 7776
Q ss_pred eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEEeeCCeEEEEecccC
Q 023822 115 RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAFGGYIRMFDARKY 192 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~ 192 (276)
.....+...+.++...+++. +..++.++.|..+|.. ++....+. ...+..+...+++.+++++ +.+..+| .++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 130 WRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDG 204 (330)
T ss_dssp EEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTS
T ss_pred EEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCC
Confidence 66665555566777776776 5667778999999998 66554443 3345567777888877777 8899999 543
Q ss_pred CCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCC
Q 023822 193 EKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVS 272 (276)
Q Consensus 193 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 272 (276)
+. ..........+.++...++|. |..++.++.|..+| .+++.+..+.. ....+..+...++|.+ ..++.+
T Consensus 205 ~~----~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~~~---~~~~~~~~~~~~~g~l-~v~t~~ 274 (330)
T 3hxj_A 205 TE----KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRFKT---GKRIESSPVIGNTDTI-YFGSYD 274 (330)
T ss_dssp CE----EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEEEEC---SSCCCSCCEECTTSCE-EEECTT
T ss_pred cE----EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEeeC---CCCccccceEcCCCeE-EEecCC
Confidence 32 333334445688888998886 55566778888888 46777666652 2333344556666654 444444
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.27 E-value=4.6e-08 Score=74.29 Aligned_cols=211 Identities=10% Similarity=0.037 Sum_probs=128.1
Q ss_pred CEEEEeecCCeEEEEEccCCeee-----eeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccC
Q 023822 47 SYLVTASDDESIRLYDVTAATCL-----KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 121 (276)
Q Consensus 47 ~~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 121 (276)
.+|+.+.. +.|+.++++..... ..+......+..++|.+++..++.+... .+.|..+++........+....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS--EPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT--TTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC--CCEEEEEecCCCCcEEEEECCC
Confidence 45555544 47888888754321 1222233467899999988887777653 7899999987665433333233
Q ss_pred cceEEEEeccCCCEE-EEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCC-CcEEEEee---CCeEEEEecccCCC
Q 023822 122 DRVVSLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQ-GLVFAVAF---GGYIRMFDARKYEK 194 (276)
Q Consensus 122 ~~i~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~-~~~l~~~~---d~~i~~~d~~~~~~ 194 (276)
.....+++++++..+ ++-...+.|.++++.......... ......++++|+ +.++++.. .+.|..+++.....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 467899999976544 444557899999987543222221 234567899995 55555543 26888888764221
Q ss_pred CCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 195 GPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 195 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
... ..........++++|++..|+.+. ..+.|.++|.........+. . ......++.. +..|+.+.
T Consensus 159 ---~~~-~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~---~-~~~P~gi~~d--~~~lyva~ 225 (267)
T 1npe_A 159 ---RIL-AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE---G-LQYPFAVTSY--GKNLYYTD 225 (267)
T ss_dssp ---EEE-ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE---C-CCSEEEEEEE--TTEEEEEE
T ss_pred ---EEE-EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec---C-CCCceEEEEe--CCEEEEEE
Confidence 111 112234578899999876665554 56789999987544433333 1 2334566654 34444443
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.26 E-value=1.4e-09 Score=80.90 Aligned_cols=189 Identities=8% Similarity=0.034 Sum_probs=126.7
Q ss_pred ccceeeccCCCc--EEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCc
Q 023822 25 EVGMSFRDYNGR--ISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 102 (276)
Q Consensus 25 ~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 102 (276)
+.+.++ .|... ...+.|+. +.+..+.+.+|.|+++|+++++.+..+ .. .........++++.+..+... ++.
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~~Ly~ltw~--~~~ 117 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGERLYQLTWT--EGL 117 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSSCEEEEESS--SCE
T ss_pred EEEEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCCEEEEEEcc--CCE
Confidence 344445 34433 46888874 566677788899999999999988887 32 233333333455566655542 899
Q ss_pred eEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec-------CCCeeEecCCCcE
Q 023822 103 LRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-------GRPAAAYDDQGLV 175 (276)
Q Consensus 103 i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 175 (276)
+.+||..+.+.+.++... ..-..++ ++++.|+.+..+++|.++|..+.+....+... ..+.+.+. +|++
T Consensus 118 v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 999999999999888743 2224444 56777777777899999999999888777321 12345555 6777
Q ss_pred EEEee-CCeEEEEecccCCCCCeeeeeec-----------CCCCCceEEEECCCCcEEEEee
Q 023822 176 FAVAF-GGYIRMFDARKYEKGPFDIFSVG-----------GDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 176 l~~~~-d~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
++... ++.|.+.|.++++.. ....+. ....-.+.||++|+++.|++.+
T Consensus 194 yanvw~s~~I~vIDp~TG~V~--~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVV--GVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEE--EEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEE--EEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 76665 789999999887631 112211 1223568899999876555554
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.25 E-value=2.8e-09 Score=85.17 Aligned_cols=212 Identities=5% Similarity=0.004 Sum_probs=127.4
Q ss_pred CEEEEeecCCeEEEEEccCCeeeeeeeeeeece-----EEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccC
Q 023822 47 SYLVTASDDESIRLYDVTAATCLKTINSKKYGV-----DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 121 (276)
Q Consensus 47 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 121 (276)
..++.++.++.|..+|..+++.+..+....... ..... .+..++++.. ++.+..+|..+++.+.......
T Consensus 144 ~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~---~g~l~~~d~~tG~~~w~~~~~~ 218 (376)
T 3q7m_A 144 GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGD---NGRVSAVLMEQGQMIWQQRISQ 218 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCT---TTEEEEEETTTCCEEEEEECCC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcC---CCEEEEEECCCCcEEEEEeccc
Confidence 355566667777777777777665554322111 11122 2456667766 8999999999998877664221
Q ss_pred cc----eE---EEEecc--CCCEEEEeeCCCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEeeCCeEEEEecccC
Q 023822 122 DR----VV---SLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKY 192 (276)
Q Consensus 122 ~~----i~---~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~ 192 (276)
.. +. .+...| .+..++.++.++.+..+|.++++..-.........+.. .++.+++++.++.+..+|.+++
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 219 ATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV-DGNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp -----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEE-ETTEEEEEETTCCEEEEETTTC
T ss_pred CCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceE-ECCEEEEEcCCCeEEEEECCCC
Confidence 10 00 011111 34567778889999999999988775554333333333 2556666666899999999886
Q ss_pred CCCCeeeeeec-CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEE-EEECCCCcEEEEec
Q 023822 193 EKGPFDIFSVG-GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGR 270 (276)
Q Consensus 193 ~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~ 270 (276)
+. ..... .....+..... .+..|++++.+|.|+.+|..+++.+..+.. ....+.. ... .+..|+.++
T Consensus 298 ~~----~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~---~~~~~~~~~~~--~~~~l~v~~ 366 (376)
T 3q7m_A 298 VT----LWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV---DSSGFQTEPVA--ADGKLLIQA 366 (376)
T ss_dssp CE----EEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC---CTTCBCSCCEE--ETTEEEEEB
T ss_pred cE----EEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec---CCCcceeCCEE--ECCEEEEEe
Confidence 63 33332 11122222333 245688888999999999999999887763 2222221 122 244677777
Q ss_pred CCCCC
Q 023822 271 VSPFS 275 (276)
Q Consensus 271 ~dg~v 275 (276)
.+|.+
T Consensus 367 ~~G~l 371 (376)
T 3q7m_A 367 KDGTV 371 (376)
T ss_dssp TTSCE
T ss_pred CCCEE
Confidence 78754
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=7.5e-10 Score=95.11 Aligned_cols=221 Identities=11% Similarity=0.041 Sum_probs=144.7
Q ss_pred CCEEEEeecCCeEEEEEccCCeeeeeeeee-e----eceEEEEEeccCCeEEEeccC---CCCCceEEEEccCCceeeee
Q 023822 46 SSYLVTASDDESIRLYDVTAATCLKTINSK-K----YGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 117 (276)
Q Consensus 46 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~~~~~---~~d~~i~~~d~~~~~~~~~~ 117 (276)
+..|+.++.|+.|..+|..+|+.+..+... . ..+..--.. .+..++++... +.++.|+.+|..+++.+..+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 567888889999999999999988777654 1 112111111 24556655431 12689999999999988776
Q ss_pred cccCcc--------------------------------eEEEEeccCCCEEEEeeCCC-------------------eEE
Q 023822 118 KGHHDR--------------------------------VVSLSLCSSKDCFISGSLDR-------------------TVL 146 (276)
Q Consensus 118 ~~~~~~--------------------------------i~~~~~~~~~~~l~~~~~d~-------------------~i~ 146 (276)
...... ...++++|++.+++.+..++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 532211 13577888888888877664 599
Q ss_pred EEeccCceeeeeEeecC--------CC---eeEecCCC---cEEEEee-CCeEEEEecccCCCCCeeeeeecCC------
Q 023822 147 LWDQRAEKCQGLLRVQG--------RP---AAAYDDQG---LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGD------ 205 (276)
Q Consensus 147 iwd~~~~~~~~~~~~~~--------~~---~~~~~~~~---~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~------ 205 (276)
.+|.++++.+-.++... .. .+....+| ..++.+. +|.++++|.++++. +......
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~----l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKF----ISAKNFVPVNWAS 362 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE----EEEEESSCCSSEE
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCE----eccccccccCccc
Confidence 99999998876663321 11 12222356 4555555 89999999988764 1111100
Q ss_pred -----C------------------------CCceEEEECCCCcEEEEeec------------------------------
Q 023822 206 -----I------------------------SDANVVKFSNDGRLMLLTTM------------------------------ 226 (276)
Q Consensus 206 -----~------------------------~~i~~~~~~~~~~~l~~~~~------------------------------ 226 (276)
. ..-..++++|++.++++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 0 01125789998888877543
Q ss_pred -------------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 227 -------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 227 -------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.|.|..||+.+++.+-.+. +..++....+..++.+++.++.||.+
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~----~~~~~~~g~~~~~g~~v~~g~~dg~l 500 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE----HVSPWNGGTLTTAGNVVFQGTADGRL 500 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEE
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecC----CCCCCcCcceEeCCCEEEEECCCCcE
Confidence 2789999999999988876 23344445566777788888888764
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=6.1e-09 Score=86.16 Aligned_cols=216 Identities=10% Similarity=0.063 Sum_probs=146.5
Q ss_pred EEEeecCCeEEEEEccCCeeeeeeeee---------------------------------------eeceEEEEEec---
Q 023822 49 LVTASDDESIRLYDVTAATCLKTINSK---------------------------------------KYGVDLVCFTS--- 86 (276)
Q Consensus 49 l~~~~~d~~i~iwd~~~~~~~~~~~~~---------------------------------------~~~v~~~~~~~--- 86 (276)
|.+|+..|.++|+-+.+++.+..+... .+.......+.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 668889999999999888777655210 11223345554
Q ss_pred --cCCeEEEeccCCCCCceEEEEccCCceeeeecc-cCcceEEEEe-c-cCCCEEEEee------------------CCC
Q 023822 87 --HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG-HHDRVVSLSL-C-SSKDCFISGS------------------LDR 143 (276)
Q Consensus 87 --~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~i~~~~~-~-~~~~~l~~~~------------------~d~ 143 (276)
|++++.+.... +..|.+.|+.+.++...+.- ....+..+++ . |+++++++++ .++
T Consensus 98 ~~DG~~lfVnd~~--~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 98 KYDGRFLFMNDKA--NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEEETT--TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CcCCCEEEEEcCC--CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 88888887763 77899999999998774432 2234678887 4 8999888885 245
Q ss_pred eEEEEeccCceeeeeEee-cCCCeeEecCCCcEEEEee-CC--------------------------------------e
Q 023822 144 TVLLWDQRAEKCQGLLRV-QGRPAAAYDDQGLVFAVAF-GG--------------------------------------Y 183 (276)
Q Consensus 144 ~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~-d~--------------------------------------~ 183 (276)
.+.+.|..+.+....+.. .....++++|+++++.+++ +. .
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 799999999988888854 3455789999998887777 21 2
Q ss_pred EEEEecccCCCCC-eeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCc------------EEEEeecCCC
Q 023822 184 IRMFDARKYEKGP-FDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGT------------LLSTYNVKPV 249 (276)
Q Consensus 184 i~~~d~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~------------~~~~~~~~~~ 249 (276)
|.+.|.++.+... ...... .....++.++|||+++++++ .+.+|.++|+.+.+ ......
T Consensus 256 V~VID~~~~~~~~~~~~Ipv---g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~---- 328 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPI---ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---- 328 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEE---ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB----
T ss_pred EEEEeCcccCCceeEEEEec---CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC----
Confidence 4555555421111 111111 12466799999999887765 57899999998653 333443
Q ss_pred CCCceEEEEECCCCcEEEEecCCC
Q 023822 250 SRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 250 ~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.......++|+|+|....+.-.|+
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~lds 352 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDS 352 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTT
T ss_pred CCCCcceEEECCCCeEEEEEecCC
Confidence 445678899999994334444443
No 246
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.23 E-value=1.7e-09 Score=93.38 Aligned_cols=197 Identities=12% Similarity=0.067 Sum_probs=126.7
Q ss_pred EEEEEcCCCCEEEEeecCC-------------eEEEEEccCCee----eeeeee-eeeceEEEEEeccCCeEEEeccCC-
Q 023822 38 SSMDFHKSSSYLVTASDDE-------------SIRLYDVTAATC----LKTINS-KKYGVDLVCFTSHPTTVIYSSKNG- 98 (276)
Q Consensus 38 ~~~~~~~~~~~l~~~~~d~-------------~i~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~- 98 (276)
..++|+ |++.|+.++.+. .|++|++.++.. +..... +......+.|+|++++++.....+
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 568999 999999888774 399999876542 222233 344577899999999987655422
Q ss_pred CCCceEEEEccCCc-eeeeecccCcceEEEEeccCCCEEEEee-CC---CeEEEEeccCcee--eeeEeecCCCeeEecC
Q 023822 99 WDESLRLLSLHDNK-YLRYFKGHHDRVVSLSLCSSKDCFISGS-LD---RTVLLWDQRAEKC--QGLLRVQGRPAAAYDD 171 (276)
Q Consensus 99 ~d~~i~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d---~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~ 171 (276)
....|+++|+.++. ....+..+....... |++++..|+..+ .+ +.|..+|+.++.. ...+..+....+.+++
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~ 335 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHS 335 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEE
Confidence 23589999998764 345555566555554 666666554443 33 6799999987654 2233212212228888
Q ss_pred CCcEEEEee--CC--eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC----CcEEEEECCCCcE
Q 023822 172 QGLVFAVAF--GG--YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME----GHIHVLDSFRGTL 240 (276)
Q Consensus 172 ~~~~l~~~~--d~--~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~ 240 (276)
++..|+... ++ .|++||+.... .....+ .....+..+.++|+++.++....+ +.++.||+.+++.
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYEGKR---VREVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTSCE---EEEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCEEEEEEEECCeeEEEEEECCCCe---eEEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 887776665 44 78899887432 112222 223456667788888766665444 7899999887764
No 247
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.23 E-value=2.6e-12 Score=102.51 Aligned_cols=146 Identities=16% Similarity=0.136 Sum_probs=83.5
Q ss_pred cCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec--C-
Q 023822 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--G- 163 (276)
Q Consensus 87 ~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--~- 163 (276)
++..+++++. |+.|+.||..+++.+..+.. +.+.+..+..++..+++++.|+.|+.||.++++.+..+... .
T Consensus 8 ~~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTL---DGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEET---TSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcC---CCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 5678888887 99999999999999988875 45555555667778888889999999999888765444211 0
Q ss_pred C-CeeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEE
Q 023822 164 R-PAAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242 (276)
Q Consensus 164 ~-~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 242 (276)
+ ....+..++.+++++.++.++.||.++++. ......+. ...++|++..+++++.|+.|+.||..+|+.+.
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~----~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLTGEK----QQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCCCcE----EEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 1 111222345555555589999999998775 22222221 23556788889999999999999999998876
Q ss_pred Eee
Q 023822 243 TYN 245 (276)
Q Consensus 243 ~~~ 245 (276)
.+.
T Consensus 155 ~~~ 157 (369)
T 2hz6_A 155 NAT 157 (369)
T ss_dssp EEE
T ss_pred eEe
Confidence 654
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.20 E-value=1.9e-09 Score=92.75 Aligned_cols=226 Identities=10% Similarity=0.052 Sum_probs=141.4
Q ss_pred CCEEEEeecCCeEEEEEccCCeeeeeeeee-e-eceEEEEEec--cCCeEEEeccC---CCCCceEEEEccCCceeeeec
Q 023822 46 SSYLVTASDDESIRLYDVTAATCLKTINSK-K-YGVDLVCFTS--HPTTVIYSSKN---GWDESLRLLSLHDNKYLRYFK 118 (276)
Q Consensus 46 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~-~~v~~~~~~~--~~~~l~~~~~~---~~d~~i~~~d~~~~~~~~~~~ 118 (276)
+..++.++.|+.|..+|.++|+.+-.+... . .....+..+| .+..++++... +.++.|..||..+++.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 457888889999999999999988776542 1 0001111111 13445555421 126899999999999887764
Q ss_pred ccC-------------------------------cceEEEEeccCCCEEEEeeCCCe-------------------EEEE
Q 023822 119 GHH-------------------------------DRVVSLSLCSSKDCFISGSLDRT-------------------VLLW 148 (276)
Q Consensus 119 ~~~-------------------------------~~i~~~~~~~~~~~l~~~~~d~~-------------------i~iw 148 (276)
... .....++++|+..+++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 210 01125778888888888887764 9999
Q ss_pred eccCceeeeeEeecC--C------C-ee--EecCCCc---EEEEee-CCeEEEEecccCCCCCee-------eeee----
Q 023822 149 DQRAEKCQGLLRVQG--R------P-AA--AYDDQGL---VFAVAF-GGYIRMFDARKYEKGPFD-------IFSV---- 202 (276)
Q Consensus 149 d~~~~~~~~~~~~~~--~------~-~~--~~~~~~~---~l~~~~-d~~i~~~d~~~~~~~~~~-------~~~~---- 202 (276)
|.++++.+-.+.... . . .+ ....+++ .++.+. +|.++++|.++++..... ....
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 999998876663321 0 1 11 1112453 555555 899999999887641000 0000
Q ss_pred -------------cCC-----------CCCceEEEECCCCcEEEEeec--------------------------------
Q 023822 203 -------------GGD-----------ISDANVVKFSNDGRLMLLTTM-------------------------------- 226 (276)
Q Consensus 203 -------------~~~-----------~~~i~~~~~~~~~~~l~~~~~-------------------------------- 226 (276)
... ...-..++++|+..++++...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 000 001223789998877776532
Q ss_pred -------------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 227 -------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 227 -------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
+|.|+.||+.+++.+-.+.. ..+...-.+...+.+++.|+.||++
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~gt~dg~l 498 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----VTIFNGGTLSTAGNLVFEGSADGRV 498 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEE
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccC----CCCccCccceECCCEEEEECCCCcE
Confidence 37799999999999888773 2233334556677788888888864
No 249
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.19 E-value=2.2e-08 Score=80.01 Aligned_cols=190 Identities=9% Similarity=0.039 Sum_probs=120.7
Q ss_pred CCCEEEEeecCCeEEEEEccCCeeeeeeeeee---------eceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceee
Q 023822 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKK---------YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (276)
Q Consensus 45 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~ 115 (276)
.+..+++++.++.|..+|.++++.+..+.... ..+.. ....++..+++++. ++.|..+|..+++.+.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSE---KAQVYALNTSDGTVAW 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEET---TSEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcC---CCEEEEEECCCCCEEE
Confidence 35678888889999999999998876655421 12222 22235667777776 8999999999999887
Q ss_pred eecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecC-C------CeeEecCCCcEEEEeeCCeEEEEe
Q 023822 116 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-R------PAAAYDDQGLVFAVAFGGYIRMFD 188 (276)
Q Consensus 116 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~------~~~~~~~~~~~l~~~~d~~i~~~d 188 (276)
.............. .+..++.++.++.|..+|.++++.+-...... . ...... ++.+++...++.+..+|
T Consensus 128 ~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 128 QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEE
T ss_pred EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEE
Confidence 76543322222222 24477888889999999999988776653321 1 112222 45555555589999999
Q ss_pred cccCCCCCeeeeeecCCC--C-----CceEEEECC--CCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 189 ARKYEKGPFDIFSVGGDI--S-----DANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~--~-----~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.++++. ........ . .+..+...| .+..++.++.++.+..+|..+++.+....
T Consensus 205 ~~tG~~----~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~ 266 (376)
T 3q7m_A 205 MEQGQM----IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE 266 (376)
T ss_dssp TTTCCE----EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred CCCCcE----EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc
Confidence 987653 22211110 0 000011111 24567778889999999999999886665
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.19 E-value=2.2e-08 Score=73.85 Aligned_cols=192 Identities=10% Similarity=0.054 Sum_probs=126.7
Q ss_pred cccceeeccCCC--cEEEEEEcCCCCEEEEeecC--CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCC
Q 023822 24 MEVGMSFRDYNG--RISSMDFHKSSSYLVTASDD--ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW 99 (276)
Q Consensus 24 ~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 99 (276)
++.+.++ .|.. -...+.|++ +.+..+.+.+ ..|+.+|+++++.+..+.... ........+.++.+......
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~-- 83 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWR-- 83 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESS--
T ss_pred eEEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEee--
Confidence 3444555 4543 466899986 5555666664 489999999999988876443 22223333345666665542
Q ss_pred CCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec-------CCCeeEecCC
Q 023822 100 DESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-------GRPAAAYDDQ 172 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~ 172 (276)
++.+.+||..+.+.+.++.... .-..++ +++..|+.+..+++|.++|..+.+.+..+... ..+.+.+. +
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp SSEEEEEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 8999999999999998887433 224444 56776776677899999999998888777321 22234444 6
Q ss_pred CcEEEEee-CCeEEEEecccCCCCCeeeeeec-----------CCCCCceEEEECCCCcEEEEeec
Q 023822 173 GLVFAVAF-GGYIRMFDARKYEKGPFDIFSVG-----------GDISDANVVKFSNDGRLMLLTTM 226 (276)
Q Consensus 173 ~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~~ 226 (276)
+++++... +..|.+.|.++++.. ....+. ....-.+.|+++|+++.|++.+.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~--~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVV--AWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEE--EEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCeEEEEECCCCCEE--EEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 77776665 789999999987631 112211 11235688999998766666553
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.09 E-value=7.9e-08 Score=82.57 Aligned_cols=206 Identities=12% Similarity=0.128 Sum_probs=133.4
Q ss_pred CCeEEEEEccCCeeeeeeeeee-------------------------------eceEEEEEeccCCeEEEeccCCCCC--
Q 023822 55 DESIRLYDVTAATCLKTINSKK-------------------------------YGVDLVCFTSHPTTVIYSSKNGWDE-- 101 (276)
Q Consensus 55 d~~i~iwd~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~~~~d~-- 101 (276)
+|.|..+|..+|+.+-.+.... .....+++.+....++++.. ++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~---~g~~ 253 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTG---NGSP 253 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECC---CEES
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCC---CCCc
Confidence 5899999999999887764210 01124678888888888765 43
Q ss_pred -----------------ceEEEEccCCceeeeecc--cC-------cceEEEEeccCCC---EEEEeeCCCeEEEEeccC
Q 023822 102 -----------------SLRLLSLHDNKYLRYFKG--HH-------DRVVSLSLCSSKD---CFISGSLDRTVLLWDQRA 152 (276)
Q Consensus 102 -----------------~i~~~d~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~~~~~d~~i~iwd~~~ 152 (276)
.|..+|..+++.+..++. |. .+.....+..+++ .++.++.+|.++++|.++
T Consensus 254 w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 254 WNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp SCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred cccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 499999999999887754 22 2222223334665 688999999999999999
Q ss_pred ceeeeeEeecC--------------------------------------CCeeEecCCCcEEEEe---------------
Q 023822 153 EKCQGLLRVQG--------------------------------------RPAAAYDDQGLVFAVA--------------- 179 (276)
Q Consensus 153 ~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~l~~~--------------- 179 (276)
++.+....... -..++++|+..++.+.
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 413 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDF 413 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGC
T ss_pred CCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccc
Confidence 98773331111 0126777776554431
Q ss_pred ----------------------eCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCC
Q 023822 180 ----------------------FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 180 ----------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 237 (276)
.++.|..||+.+++. ...... ..+.....+...+.++++++.|+.++.||.++
T Consensus 414 ~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~----~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 414 VTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA----AWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE----EEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccccccCccccccCCCCCCCccceEEEEeCCCCcE----EEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 137799999988664 222222 12333334455677888999999999999999
Q ss_pred CcEEEEeecCCCCCCceEEEEECCCCc-EEEEec
Q 023822 238 GTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGR 270 (276)
Q Consensus 238 ~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~ 270 (276)
|+.+..+....+... .-+.+..+|+ +++.++
T Consensus 489 G~~l~~~~~~~~~~~--~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 489 GEALWQFEAQSGIVA--APMTFELAGRQYVAIMA 520 (668)
T ss_dssp CCEEEEEECSSCCCS--CCEEEEETTEEEEEEEE
T ss_pred ChhheEecCCCCccc--CceEEEECCEEEEEEEe
Confidence 999998874321111 2234456776 444443
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.07 E-value=7.2e-07 Score=70.48 Aligned_cols=204 Identities=6% Similarity=0.020 Sum_probs=128.4
Q ss_pred CcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce
Q 023822 35 GRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~ 113 (276)
..+..++|++.+..|+ +-...+.|..+++........+.........+++.+.+..|+.+... .+.|.+.++.....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGAHR 150 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSCSC
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC--CCeEEEEcCCCCce
Confidence 4467899997655555 44467889999987654333333223346788998877777666542 67899999875543
Q ss_pred eeeecccCcceEEEEeccCCCEEE-EeeCC-CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--CCeEEEE
Q 023822 114 LRYFKGHHDRVVSLSLCSSKDCFI-SGSLD-RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--GGYIRMF 187 (276)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d-~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d~~i~~~ 187 (276)
...+...-.....++++|.+..|+ +-... +.|..+++......... .......++++|++..|..+. .+.|..+
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 333333345568999998665444 44444 78888888754332222 223345799998665444444 6889999
Q ss_pred ecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 188 DARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 188 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
|+..... .............+++ ..+.++++-...+.|..++..+|+....+.
T Consensus 231 ~~dG~~~----~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 231 NLDGSHR----KAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp ETTSCSC----EEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCce----EEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 9875322 1112222345677888 345555555567889999877777666654
No 253
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.07 E-value=4.2e-07 Score=72.83 Aligned_cols=205 Identities=6% Similarity=0.012 Sum_probs=129.5
Q ss_pred CCcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCc
Q 023822 34 NGRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~ 112 (276)
...+..++|.+.+..|+ +-...+.|..+++........+.........+++.+.+..|+.+... .+.|.+.++....
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~--~~~I~~~~~dg~~ 192 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGAH 192 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT--TTEEEECBTTSCS
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC--CCeEEEEeCCCCc
Confidence 34577899997555554 54567889999987655433333333346778998877777666542 6788888876544
Q ss_pred eeeeecccCcceEEEEeccCCCEEEEee-CC-CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--CCeEEE
Q 023822 113 YLRYFKGHHDRVVSLSLCSSKDCFISGS-LD-RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--GGYIRM 186 (276)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d~~i~~ 186 (276)
....+...-.....+++.|.+..|+.+. .. +.|..+++......... .......++++|++..|..+. .+.|..
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 3333333335678999998766555444 34 68888888754333222 222345799997655444444 688999
Q ss_pred EecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 187 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
+|+..... .............+++ ..+.++++-...+.|..++..+|+.+..+.
T Consensus 273 ~d~dG~~~----~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 273 ANLDGSHR----KAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp ECTTSCSC----EEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EeCCCCee----EEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 99875322 1112222345677888 445555666677889999977777766665
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.05 E-value=1.3e-06 Score=68.98 Aligned_cols=213 Identities=11% Similarity=-0.005 Sum_probs=130.6
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL 114 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~ 114 (276)
...+|.+..+++ +|+.+. ...|+..++........+.. ...+..++|.+....|+.+... .+.|..+++......
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVT--LDRILRANLNGSNVE 108 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCE
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEecc--CCceEEEecCCCCce
Confidence 344566666643 444443 34588888865544333332 3357899999888888777642 788999998876544
Q ss_pred eeecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--C-CeEEEEe
Q 023822 115 RYFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--G-GYIRMFD 188 (276)
Q Consensus 115 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d-~~i~~~d 188 (276)
..+.........+++.+.+. ++++-...+.|.+.++........+ .......++++|.+..|..+. . +.|..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 43333334457889987544 5555556788999998765433222 223456889998654444444 4 7888888
Q ss_pred cccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEE
Q 023822 189 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (276)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (276)
+..... ...........+.++++|++..|+.+. ..+.|..+|+........+. ........+++
T Consensus 189 ~dG~~~----~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~---~~~~~P~giav 253 (349)
T 3v64_C 189 MDGSGR----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS---QGLPHPFAITV 253 (349)
T ss_dssp TTSCSC----EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---SSCSSEEEEEE
T ss_pred CCCCCc----EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe---CCCCCceEEEE
Confidence 765322 111122334578899998766666554 56789999976433332232 12345667777
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.04 E-value=1.1e-06 Score=65.69 Aligned_cols=199 Identities=13% Similarity=0.161 Sum_probs=128.0
Q ss_pred eeccCCCcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeee-eeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 29 SFRDYNGRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 29 ~~~~h~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
.+.+-.+.+..++|+|+++.|+ +...++.|...|.. ++.++.+... ......+++.+++.++++.-. ++.+.++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~---~~~l~~~ 96 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDER---DYAIYVI 96 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETT---TTEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECC---CCcEEEE
Confidence 4556567899999999766554 56778889999987 8877776432 245778888888765555433 7889999
Q ss_pred EccCCcee---eeec------ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccC---ceeeeeE---------eecCCC
Q 023822 107 SLHDNKYL---RYFK------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRA---EKCQGLL---------RVQGRP 165 (276)
Q Consensus 107 d~~~~~~~---~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~---------~~~~~~ 165 (276)
++.....+ .... ..+.....++|+|+++.|+++.......+|.++. ......+ ......
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 87654421 2221 2344568999999987777666655445555431 1111111 223456
Q ss_pred eeEecCCC-cEEEEee-CCeEEEEecccCCCCCeeeeeecCC-------CCCceEEEECCCCcEEEEeecCCcEEEEEC
Q 023822 166 AAAYDDQG-LVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGD-------ISDANVVKFSNDGRLMLLTTMEGHIHVLDS 235 (276)
Q Consensus 166 ~~~~~~~~-~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 235 (276)
.++++|.. ++++.+. ++.+..+|.... ......+... ....-.|+|.++|+ |+..++-+.++.+.-
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g~---~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVGE---VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEEEC
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCCC---EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEEEe
Confidence 88999864 5666665 688999997752 2333333321 13567899999998 555577777777753
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.04 E-value=6e-07 Score=72.95 Aligned_cols=230 Identities=12% Similarity=0.118 Sum_probs=134.1
Q ss_pred cEEEEEEcC-CCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCC-C-ceEEEEccCCc
Q 023822 36 RISSMDFHK-SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-E-SLRLLSLHDNK 112 (276)
Q Consensus 36 ~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d-~-~i~~~d~~~~~ 112 (276)
....++++| ++..|+.+...+.|+.+|++.++...... .......++|+++++.|+++...+.. . .+..++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 456889998 45566666555889999987766444333 44568899999999977777642111 1 2333443 332
Q ss_pred ee--eeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCceeeeeEee---cCCCeeEecCCCcEEEEee--CCeE
Q 023822 113 YL--RYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRV---QGRPAAAYDDQGLVFAVAF--GGYI 184 (276)
Q Consensus 113 ~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~--d~~i 184 (276)
.. ..+.. ......++++| ++.++++-..++.|..++............ .....++++|+++.|..+. .+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 22 22221 23456788999 676666666778999999987664333322 2355799999998544443 6899
Q ss_pred EEEecccCCC--CCeeeeeec-C------------CCCCce-EEEEC--------CCCcEEEEeecCCcEEEEECCCCcE
Q 023822 185 RMFDARKYEK--GPFDIFSVG-G------------DISDAN-VVKFS--------NDGRLMLLTTMEGHIHVLDSFRGTL 240 (276)
Q Consensus 185 ~~~d~~~~~~--~~~~~~~~~-~------------~~~~i~-~~~~~--------~~~~~l~~~~~dg~i~i~d~~~~~~ 240 (276)
..++...... .....+.-. + .-.... .++.. ++|.++++-...+.|+.++ .+|+.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 9988764211 000111100 0 011223 45553 4466555555677899998 56654
Q ss_pred EEEeec----CCC----------CCCceEEEEECCC-CcEEEEe
Q 023822 241 LSTYNV----KPV----------SRNSTLEASFSPE-GMFVISG 269 (276)
Q Consensus 241 ~~~~~~----~~~----------~~~~v~~~~~s~~-g~~l~~~ 269 (276)
...... ..+ .-.....++++|+ |.++++-
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD 417 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGD 417 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEE
Confidence 443321 001 0125789999995 5555443
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.03 E-value=1.6e-07 Score=79.06 Aligned_cols=213 Identities=13% Similarity=0.115 Sum_probs=131.5
Q ss_pred CEEEEeec------CCeEEEEEccCCeeeeeeeeeeec--------------------------------------eEEE
Q 023822 47 SYLVTASD------DESIRLYDVTAATCLKTINSKKYG--------------------------------------VDLV 82 (276)
Q Consensus 47 ~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~--------------------------------------v~~~ 82 (276)
..++.++. ++.|..+|..+|+.+-.+...... ...+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 34555554 789999999999988766532110 0135
Q ss_pred EEeccCCeEEEeccCC-------------CCCceEEEEccCCceeeeeccc--C--------cceEEEEeccCCC---EE
Q 023822 83 CFTSHPTTVIYSSKNG-------------WDESLRLLSLHDNKYLRYFKGH--H--------DRVVSLSLCSSKD---CF 136 (276)
Q Consensus 83 ~~~~~~~~l~~~~~~~-------------~d~~i~~~d~~~~~~~~~~~~~--~--------~~i~~~~~~~~~~---~l 136 (276)
++.+....++.+..+. +.+.|..+|..+++.+..++.. . .++ -+....+|+ .+
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLL 319 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEE
Confidence 6666666776665310 1136999999999988776532 1 121 122224674 57
Q ss_pred EEeeCCCeEEEEeccCceeeeeEeecC-C----------------------------------------CeeEecCCCcE
Q 023822 137 ISGSLDRTVLLWDQRAEKCQGLLRVQG-R----------------------------------------PAAAYDDQGLV 175 (276)
Q Consensus 137 ~~~~~d~~i~iwd~~~~~~~~~~~~~~-~----------------------------------------~~~~~~~~~~~ 175 (276)
+.++.+|.++++|.++++.+-...... + ..++++|+..+
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~ 399 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRT 399 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTE
T ss_pred EEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCE
Confidence 788899999999999988765553221 0 13567777655
Q ss_pred EEEee--------------------------------------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCC
Q 023822 176 FAVAF--------------------------------------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSND 217 (276)
Q Consensus 176 l~~~~--------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 217 (276)
+.+.. ++.|..||..+++. ....... .++....+...
T Consensus 400 ~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~----~W~~~~~-~~~~~~~~~t~ 474 (571)
T 2ad6_A 400 LYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA----KWTKWEK-FAAWGGTLYTK 474 (571)
T ss_dssp EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE----EEEEEES-SCCCSBCEEET
T ss_pred EEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE----EEEecCC-CCccceeEEEC
Confidence 54432 36888899887664 2222211 12222223334
Q ss_pred CcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEE
Q 023822 218 GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 267 (276)
Q Consensus 218 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 267 (276)
+..+++++.||.|+.+|.++|+.+.++.......+ .-+.+..+|+.++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~--~p~~~~~~G~~yv 522 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIG--SPMTYSFKGKQYI 522 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS--CCEEEEETTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEe--eeEEEEECCEEEE
Confidence 56677799999999999999999998874221111 1234567886444
No 258
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.02 E-value=2.9e-06 Score=66.07 Aligned_cols=207 Identities=7% Similarity=0.022 Sum_probs=126.0
Q ss_pred CCcEEEEEEcCCCCEEE-EeecCCeEEEEEccC---Ceeee-eeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 34 NGRISSMDFHKSSSYLV-TASDDESIRLYDVTA---ATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~---~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
......++|+++++.|+ +-..++.|..+++.. +.... .+...-.....+++.+.+..|+.+... .+.|.++++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~--~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC--CCEEEEEeC
Confidence 34578999998665554 445668999999875 12222 222222356789998777777666442 789999998
Q ss_pred cCCceeeeecccCcceEEEEeccCCCEEEEeeC-C-CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--CC
Q 023822 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-D-RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--GG 182 (276)
Q Consensus 109 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d~ 182 (276)
........+.........++++|.+..|+.+.. . +.|...++......... .......+++++++..|..+. .+
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 754433333323356789999986665554443 3 68888887644322222 223455899998765554444 68
Q ss_pred eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 183 ~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.|..+|+..... ..+............+++. .+.++++-...+.|..++..+++.+..+.
T Consensus 187 ~I~~~d~dg~~~--~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 187 SISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEEEEETTSCSC--EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred eEEEEecCCCce--EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 999999875322 1122221223345678875 35555555667889999987777655554
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.02 E-value=1.3e-06 Score=71.06 Aligned_cols=231 Identities=10% Similarity=0.058 Sum_probs=133.6
Q ss_pred cEEEEEEcCC--CCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCC-CCc-eEEEEccCC
Q 023822 36 RISSMDFHKS--SSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-DES-LRLLSLHDN 111 (276)
Q Consensus 36 ~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-d~~-i~~~d~~~~ 111 (276)
....++|+|+ +..|+.+...+.|+.+|..+++...... .......+++.++++ |+++...+. +.. +...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4568999984 4445555444889999988777654433 344688999999999 555543110 111 333333222
Q ss_pred ce-eeeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCceeeeeE-eec---CCCeeEecCCCcEEEEee--CCe
Q 023822 112 KY-LRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLL-RVQ---GRPAAAYDDQGLVFAVAF--GGY 183 (276)
Q Consensus 112 ~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~---~~~~~~~~~~~~~l~~~~--d~~ 183 (276)
.. ...+. .-.....++++| ++.++++-..++.|+.+|..++.....+ ... ....++++|++..|..+. .+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 01121 223456788999 6666666666789999998866652222 111 122599999998544444 689
Q ss_pred EEEEecccCCC--C-Ceeeeee------------cCCCCCceEEEE---------CCCCcEEEEeecCCcEEEEECCCCc
Q 023822 184 IRMFDARKYEK--G-PFDIFSV------------GGDISDANVVKF---------SNDGRLMLLTTMEGHIHVLDSFRGT 239 (276)
Q Consensus 184 i~~~d~~~~~~--~-~~~~~~~------------~~~~~~i~~~~~---------~~~~~~l~~~~~dg~i~i~d~~~~~ 239 (276)
|+.++...... . +...... ...-.....+++ .++|.++++-...+.|+.++. +|.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 99988653211 0 0111110 001124567999 777877776667788999984 664
Q ss_pred EEEEeecC----CC----------CCCceEEEEEC-CCCcEEEEec
Q 023822 240 LLSTYNVK----PV----------SRNSTLEASFS-PEGMFVISGR 270 (276)
Q Consensus 240 ~~~~~~~~----~~----------~~~~v~~~~~s-~~g~~l~~~~ 270 (276)
........ .+ .-.....|+++ ++|.++++-.
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 44332110 00 01247889999 6666555543
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.02 E-value=2e-07 Score=81.21 Aligned_cols=196 Identities=8% Similarity=0.059 Sum_probs=110.8
Q ss_pred cEEEEEEc-CCCCEEEEeec-C----CeEEEEEccCC-eeeeeeeeeeeceEEEEEeccCCeEEEeccCC--CCCceEEE
Q 023822 36 RISSMDFH-KSSSYLVTASD-D----ESIRLYDVTAA-TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLL 106 (276)
Q Consensus 36 ~v~~~~~~-~~~~~l~~~~~-d----~~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~~~ 106 (276)
.+...+|| |||++||.+.. + .+|+++|+.++ +.+... -......+.|+||++.|+...... ....|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 67889999 99998885543 2 35999999988 633211 112245789999999888876521 01368888
Q ss_pred EccCCce--eeeec-ccCcceEEEEeccCCCEEEEeeC---CCeEEEEeccCce-ee--eeE-eec--CCCeeEecCCCc
Q 023822 107 SLHDNKY--LRYFK-GHHDRVVSLSLCSSKDCFISGSL---DRTVLLWDQRAEK-CQ--GLL-RVQ--GRPAAAYDDQGL 174 (276)
Q Consensus 107 d~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~-~~--~~~-~~~--~~~~~~~~~~~~ 174 (276)
++.++.. ...+. ........+.|+||+++|+..+. ...|+++|+.++. .. ..+ ... ....+.|+..+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 8877642 22222 22334567899999998776553 3468889988752 11 222 111 122333344455
Q ss_pred EEEEee-C----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCc--EEEEEC
Q 023822 175 VFAVAF-G----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH--IHVLDS 235 (276)
Q Consensus 175 ~l~~~~-d----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--i~i~d~ 235 (276)
+++.+. + ..|..+|+.+... .............+..+.+. .+.++++...++. |.++++
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~-~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSD-WSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTC-CCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCCCCcEEEEEcCCCccc-ceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 555544 3 3677777654211 11101111111134455554 2345555666775 556665
No 261
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.99 E-value=5.4e-06 Score=66.72 Aligned_cols=208 Identities=8% Similarity=0.014 Sum_probs=129.6
Q ss_pred CCCcEEEEEEcCCCCEEE-EeecCCeEEEEEccCC----eeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEE
Q 023822 33 YNGRISSMDFHKSSSYLV-TASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (276)
Q Consensus 33 h~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d 107 (276)
....+..++|++.+..|+ +-...+.|+.+++... .....+.........+++.+.+..|+.+... .+.|.+.+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~--~~~I~~~~ 187 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVAD 187 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEEC
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC--CCeEEEEe
Confidence 345678999998655555 4445678988888652 2222233233457789998877777766542 78899999
Q ss_pred ccCCceeeeecccCcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--C
Q 023822 108 LHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--G 181 (276)
Q Consensus 108 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d 181 (276)
+........+...-.....+++.|.+..|+.... .+.|...++......... .......+++++++..|..+. .
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 8765544444434445789999996665555442 368888888754433332 223456899998765555544 6
Q ss_pred CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 182 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 182 ~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
+.|..+|+..... ..+............+++. .+.++++-...+.|..+|..+|+.+..+.
T Consensus 268 ~~I~~~d~dG~~~--~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 268 HSISSIDVNGGNR--KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp TEEEEEETTSCCC--EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred CEEEEEeCCCCcc--EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 8999999875332 1122221223345567773 34555555667889999987887766665
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.98 E-value=1.9e-06 Score=75.69 Aligned_cols=228 Identities=10% Similarity=0.081 Sum_probs=145.9
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee--------eeeceEEEEEeccCCeEEEeccCCCCCceEE
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS--------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 105 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~ 105 (276)
...|.++...++|+ |..|+.++-|..|+..+++....... ....|.++...+++..|.+++. ++-|..
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~---~~Gl~~ 431 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH---AGGLSI 431 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET---TTEEEE
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC---cCceeE
Confidence 35699999988876 44567776799999876654332211 1346888888878774666665 677999
Q ss_pred EEccCCceeeeec----ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--------ecCCCeeEecCCC
Q 023822 106 LSLHDNKYLRYFK----GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--------VQGRPAAAYDDQG 173 (276)
Q Consensus 106 ~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~ 173 (276)
||..+++...... .....|.++...+++++.+. +. +.+.+||..+++...... ...+.++...+++
T Consensus 432 ~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 432 LHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp EETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred EeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 9988776433221 13457899988888875444 44 458899988765443221 1335577888899
Q ss_pred cEEEEeeCCeEEEEecccCCCCCeee--eeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCC-C
Q 023822 174 LVFAVAFGGYIRMFDARKYEKGPFDI--FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-S 250 (276)
Q Consensus 174 ~~l~~~~d~~i~~~d~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~ 250 (276)
.+.+++. +.+..||..+... .+.. .........|.++...++|++.+.. .. -|..||..+++.. .+....+ .
T Consensus 510 ~lWigt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~-~~~~~~gl~ 584 (795)
T 4a2l_A 510 RLWIGGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQIK-RYNTTNGLP 584 (795)
T ss_dssp CEEEEES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEE-EECGGGTCS
T ss_pred CEEEEeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCcEE-EeCCCCCCc
Confidence 8888777 6688898875332 1000 0001123468889999999865544 44 5888997766543 3332111 2
Q ss_pred CCceEEEEECCCCcEEEEecCCC
Q 023822 251 RNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 251 ~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
...|.++...++|++.+++ .+|
T Consensus 585 ~~~i~~i~~d~~g~lWi~t-~~G 606 (795)
T 4a2l_A 585 NNVVYGILEDSFGRLWLST-NRG 606 (795)
T ss_dssp CSCEEEEEECTTSCEEEEE-TTE
T ss_pred hhheEEEEECCCCCEEEEc-CCc
Confidence 4568889999998766655 344
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.96 E-value=2.2e-06 Score=68.68 Aligned_cols=210 Identities=11% Similarity=-0.009 Sum_probs=128.2
Q ss_pred EEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeee
Q 023822 38 SSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (276)
Q Consensus 38 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~ 117 (276)
.|.+..++ .+|+.+. ...|+..++.......... ....+..++|.+.+..|+.+... .+.|..+++........+
T Consensus 80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVT--LDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCCEEEEE
T ss_pred eECCcccc-ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCC--CCcEEEEecCCCCcEEEE
Confidence 34444443 3444443 3568888887655443333 23457899999887777777643 788999998876544433
Q ss_pred cccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--C-CeEEEEeccc
Q 023822 118 KGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--G-GYIRMFDARK 191 (276)
Q Consensus 118 ~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d-~~i~~~d~~~ 191 (276)
.........+++.+.+. ++++-...+.|.+.++........+ .......++++|.+..|..+. . +.|..+++..
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 33333456788887554 4555555778999888754433222 223456789998665544444 4 7888888765
Q ss_pred CCCCCeeeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEE
Q 023822 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (276)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (276)
... ...........+.++++|++..|+.+. ..+.|..+|+........+. ........+++
T Consensus 235 ~~~----~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~---~~~~~P~giav 296 (386)
T 3v65_B 235 SGR----RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS---QGLPHPFAITV 296 (386)
T ss_dssp CSC----EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC---SSCSSEEEEEE
T ss_pred CCc----EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE---CCCCCceEEEE
Confidence 332 122222334578999998766666554 56789999976433333332 12345667777
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.95 E-value=4.9e-07 Score=76.31 Aligned_cols=208 Identities=12% Similarity=0.127 Sum_probs=127.6
Q ss_pred CCeEEEEEccCCeeeeeeeeeeec-------------------------------------e-EEEEEeccCCeEEEecc
Q 023822 55 DESIRLYDVTAATCLKTINSKKYG-------------------------------------V-DLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 55 d~~i~iwd~~~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~ 96 (276)
++.|+.+|.++|+.+-.+...... + ..+++.+....++.+..
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 799999999999987766532211 0 13456667777777765
Q ss_pred CC-------------CCCceEEEEccCCceeeeecccCc---------ceEEEEec-cCC---CEEEEeeCCCeEEEEec
Q 023822 97 NG-------------WDESLRLLSLHDNKYLRYFKGHHD---------RVVSLSLC-SSK---DCFISGSLDRTVLLWDQ 150 (276)
Q Consensus 97 ~~-------------~d~~i~~~d~~~~~~~~~~~~~~~---------~i~~~~~~-~~~---~~l~~~~~d~~i~iwd~ 150 (276)
+. +.+.|..+|.++++.+..++.... ...-+... .+| +.++.++.+|.++++|.
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~ 340 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDR 340 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEET
T ss_pred CCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEEC
Confidence 21 124799999999998877654221 11112222 466 46777889999999999
Q ss_pred cCceeeeeEeecC-----------------------------------------CCeeEecCCCcEEEEe----------
Q 023822 151 RAEKCQGLLRVQG-----------------------------------------RPAAAYDDQGLVFAVA---------- 179 (276)
Q Consensus 151 ~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~l~~~---------- 179 (276)
++++.+-...... -..++++|+..++.+.
T Consensus 341 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 420 (599)
T 1w6s_A 341 TDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEP 420 (599)
T ss_dssp TTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEE
T ss_pred CCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeec
Confidence 9988765543211 0135666665554432
Q ss_pred ------------------------------eCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCc
Q 023822 180 ------------------------------FGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGH 229 (276)
Q Consensus 180 ------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 229 (276)
..+.|..||+.+++. ...... ..+...-.+...+.+++.++.||.
T Consensus 421 ~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~----~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~ 495 (599)
T 1w6s_A 421 FMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDY----KWEKME-RFAVWGGTMATAGDLVFYGTLDGY 495 (599)
T ss_dssp CCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCE----EEEEEE-SSCCCSBCEEETTTEEEEECTTSE
T ss_pred ccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCE----EeEecC-CCCccCcceEecCCEEEEECCCCe
Confidence 135777788877653 222211 112221112234567778999999
Q ss_pred EEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc-EEEEe
Q 023822 230 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISG 269 (276)
Q Consensus 230 i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~ 269 (276)
++.||.++|+.+-+++...+... .-+.+..+|+ |+++.
T Consensus 496 l~A~D~~tG~~lW~~~l~~g~~~--~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 496 LKARDSDTGDLLWKFKIPSGAIG--YPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EEEEETTTCCEEEEEECSSCCCS--CCEEEEETTEEEEEEE
T ss_pred EEEEECCCCCEEEEeeCCCCcEe--ccEEEEeCCEEEEEEE
Confidence 99999999999998874322222 2245667886 44443
No 265
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=8.3e-08 Score=82.44 Aligned_cols=224 Identities=13% Similarity=0.106 Sum_probs=136.4
Q ss_pred CCEEEEeecCCeEEEEEccCCeeeeeeeeee----eceEE-EEEeccCCeEEEeccC---CCCCceEEEEccCCceeeee
Q 023822 46 SSYLVTASDDESIRLYDVTAATCLKTINSKK----YGVDL-VCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 117 (276)
Q Consensus 46 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~~~---~~d~~i~~~d~~~~~~~~~~ 117 (276)
+..++.++.|+.|..+|.++|+.+-.+.... ..+.. ..+ .+..++++... +.++.|..+|..+++.+..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 4567888889999999999999887765421 11111 111 24455555431 12589999999999988876
Q ss_pred cccC-------------------------------cceEEEEeccCCCEEEEeeCCC-------------------eEEE
Q 023822 118 KGHH-------------------------------DRVVSLSLCSSKDCFISGSLDR-------------------TVLL 147 (276)
Q Consensus 118 ~~~~-------------------------------~~i~~~~~~~~~~~l~~~~~d~-------------------~i~i 147 (276)
.... .....+++.|+..+++.++.++ .|..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 4210 0112467888888888887766 4999
Q ss_pred EeccCceeeeeEeecC---------CCe--eEecCCCc---EEEEee-CCeEEEEecccCCCCCee-------eeeec--
Q 023822 148 WDQRAEKCQGLLRVQG---------RPA--AAYDDQGL---VFAVAF-GGYIRMFDARKYEKGPFD-------IFSVG-- 203 (276)
Q Consensus 148 wd~~~~~~~~~~~~~~---------~~~--~~~~~~~~---~l~~~~-d~~i~~~d~~~~~~~~~~-------~~~~~-- 203 (276)
+|.++++.+-.++... ... ..+..+++ .++.+. +|.++++|.++++..... ...+.
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 9999998876664321 111 11223554 455554 899999999887631000 00000
Q ss_pred ---------------------CC--CCCceEEEECCCCcEEEEe------------------------------------
Q 023822 204 ---------------------GD--ISDANVVKFSNDGRLMLLT------------------------------------ 224 (276)
Q Consensus 204 ---------------------~~--~~~i~~~~~~~~~~~l~~~------------------------------------ 224 (276)
.. ...-..++++|+...+++.
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 00 0011236788876665541
Q ss_pred ecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 225 TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 225 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
..+|.|..||+.+++.+-+... ..+.....+...+.+++.++.||.+
T Consensus 435 ~~~g~l~A~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~vf~g~~dg~l 481 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAAWKVPY----PTHWNGGTLSTAGNLVFQGTAAGQM 481 (668)
T ss_dssp GCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEE
T ss_pred CccceEEEEeCCCCcEEEEccC----CCCCcCceeEeCCCEEEEECCcccc
Confidence 1247899999999999877763 2223333444567778888887754
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.94 E-value=8.9e-07 Score=76.04 Aligned_cols=227 Identities=11% Similarity=0.064 Sum_probs=131.4
Q ss_pred EEEEcC-CCCEEEEeecCC-----------eEEEEEccCCeeee--eeee-eeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 39 SMDFHK-SSSYLVTASDDE-----------SIRLYDVTAATCLK--TINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 39 ~~~~~~-~~~~l~~~~~d~-----------~i~iwd~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
.+++.+ ++++++.|+.+. .+.+||..+++... .+.. +......+++..+++.+++++.. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~--~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC--CCce
Confidence 556677 888888887543 58899988775332 2211 12223356778899999998853 5689
Q ss_pred EEEEccCCceeeeeccc-CcceEEEEeccCCCEEEEee-CC-----CeEEEEeccCceeeee-------Eeec-------
Q 023822 104 RLLSLHDNKYLRYFKGH-HDRVVSLSLCSSKDCFISGS-LD-----RTVLLWDQRAEKCQGL-------LRVQ------- 162 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~-------~~~~------- 162 (276)
.+||..+++-...-..+ ...-.+++..+++++++.|+ .+ ..+.+||..+.+-... +...
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 99999876533221111 11223455667899888888 34 4689999876543221 0000
Q ss_pred --------------------------------------------------C--CCeeEec-CCCcEEEEee-CC------
Q 023822 163 --------------------------------------------------G--RPAAAYD-DQGLVFAVAF-GG------ 182 (276)
Q Consensus 163 --------------------------------------------------~--~~~~~~~-~~~~~l~~~~-d~------ 182 (276)
. ...+.+. .++++++.|. ++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 0 0111221 3566666654 21
Q ss_pred -----eEEEEecccCCCCCeeee--eecCCCCCceEEEECCCCcEEEEeecC-----------CcEEEEECCCCcEEEEe
Q 023822 183 -----YIRMFDARKYEKGPFDIF--SVGGDISDANVVKFSNDGRLMLLTTME-----------GHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 183 -----~i~~~d~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~ 244 (276)
.+.+||..+..- .... .+ .....-.+++..|+|++++.|+.+ ..+.+||..+.+-.. +
T Consensus 428 ~~~~~~v~~yd~~~~~W--~~~~~~~m-p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~-~ 503 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPN--TVFASNGL-YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYK-Q 503 (656)
T ss_dssp CCCEEEEECCSTTSCCE--EEECTTCC-SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEE-C
T ss_pred CCcceEEEcCCCCCCCe--eEEccCCC-CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceee-c
Confidence 577777665321 1111 11 111123455677899999998854 468999987765433 2
Q ss_pred ecCCCCCCceEEEEECCCCcEEEEecC
Q 023822 245 NVKPVSRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 245 ~~~~~~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
...+..........+.|+|+.++.|+.
T Consensus 504 ~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 504 NPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCCCccccccHhhcCCCcEEEecCCC
Confidence 211112223334567799999999985
No 267
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.93 E-value=3.1e-06 Score=63.21 Aligned_cols=193 Identities=10% Similarity=0.150 Sum_probs=122.2
Q ss_pred eeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecc-cCcceEEEEeccCCCEEEEeeCCCeEEEEecc
Q 023822 73 NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG-HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151 (276)
Q Consensus 73 ~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 151 (276)
.+-...+..++|+|++..|++.... ++.|...|.. ++.++.+.- -....-.+++.+++.++++.-.++.+.++++.
T Consensus 23 ~g~~~~lSGla~~~~~~~L~aV~d~--~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 23 AGITNNISSLTWSAQSNTLFSTINK--PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp TTCCSCEEEEEEETTTTEEEEEEET--TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCcccCcceeEEeCCCCEEEEEECC--CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3444579999999988877765542 8889999987 777776632 22457788998888776776677899999887
Q ss_pred Cceee---eeEee--------cCCCeeEecCCCc-EEEEeeCCeEEEEecccCCC-CCeeeee-----ecCCCCCceEEE
Q 023822 152 AEKCQ---GLLRV--------QGRPAAAYDDQGL-VFAVAFGGYIRMFDARKYEK-GPFDIFS-----VGGDISDANVVK 213 (276)
Q Consensus 152 ~~~~~---~~~~~--------~~~~~~~~~~~~~-~l~~~~d~~i~~~d~~~~~~-~~~~~~~-----~~~~~~~i~~~~ 213 (276)
....+ ..... .+...++++|.+. ++++.......+|.+..... ..+.+.. .......+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 55422 22211 1124899999884 44444433344444432100 1111211 012334678999
Q ss_pred ECCCC-cEEEEeecCCcEEEEECCCCcEEEEeecCCCC------CCceEEEEECCCCcEEEEe
Q 023822 214 FSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS------RNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 214 ~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~v~~~~~s~~g~~l~~~ 269 (276)
++|.. ++++.......+..+|. +++.+..+....+. -...-.++|.++|++.+++
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 99964 55566667788999995 57777777643221 1256889999999866653
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.93 E-value=4.8e-07 Score=76.33 Aligned_cols=160 Identities=12% Similarity=0.130 Sum_probs=99.2
Q ss_pred CceEEEEccCCceeeeecc--cC--------cceEEEEec-cCCC---EEEEeeCCCeEEEEeccCceeeeeEeecC-C-
Q 023822 101 ESLRLLSLHDNKYLRYFKG--HH--------DRVVSLSLC-SSKD---CFISGSLDRTVLLWDQRAEKCQGLLRVQG-R- 164 (276)
Q Consensus 101 ~~i~~~d~~~~~~~~~~~~--~~--------~~i~~~~~~-~~~~---~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~- 164 (276)
+.|..+|..+++.+..++. |. .++. +... .+|+ .++.++.+|.++++|.++++.+-...... +
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 6899999999999887753 22 1111 1221 4564 78889999999999999988765542211 0
Q ss_pred ---------------------------------------------CeeEecCCCcEEEEee-------------------
Q 023822 165 ---------------------------------------------PAAAYDDQGLVFAVAF------------------- 180 (276)
Q Consensus 165 ---------------------------------------------~~~~~~~~~~~l~~~~------------------- 180 (276)
..++++|+..++.+..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 1345666543333321
Q ss_pred ---------------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 181 ---------------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 181 ---------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
++.|..||+.+++. ....... .+...-.....+.+++.++.||.++.||.++|+.+-+++
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~----~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKV----VWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCE----EEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCE----EEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 47788899888764 2222211 122221222245678889999999999999999999988
Q ss_pred cCCCCCCceEEEEECCCCc-EEEE
Q 023822 246 VKPVSRNSTLEASFSPEGM-FVIS 268 (276)
Q Consensus 246 ~~~~~~~~v~~~~~s~~g~-~l~~ 268 (276)
...+... .-+.|..+|+ |+++
T Consensus 525 ~~~g~~a--~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 525 TGSGIVS--PPITWEQDGEQYLGV 546 (582)
T ss_dssp CSSCCCS--CCEEEEETTEEEEEE
T ss_pred CCCCccc--CceEEEECCEEEEEE
Confidence 4221111 2256667886 4443
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.92 E-value=6.3e-06 Score=72.42 Aligned_cols=229 Identities=10% Similarity=0.109 Sum_probs=146.6
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee-------eeeceEEEEEeccCCeEEEeccCCCCCceEEE
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS-------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 106 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~ 106 (276)
...|.++...+++.+.+ ++.++-+.+||..+++....... ....|.++...+++... +++. + -|.+|
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~---~-Gl~~~ 287 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTF---N-DLNIY 287 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEE-EEES---S-CEEEE
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEE-EEeC---C-hhheE
Confidence 45688888877776554 44444488999877654332211 13568888888777644 4443 4 68899
Q ss_pred EccCCceeeeecc-------cCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--------eecCCCeeEecC
Q 023822 107 SLHDNKYLRYFKG-------HHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--------RVQGRPAAAYDD 171 (276)
Q Consensus 107 d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--------~~~~~~~~~~~~ 171 (276)
|..+++....... ....|.++...++|. |..|+.++-|..|+.......... ....+.++..++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp ETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT
T ss_pred cCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC
Confidence 9877654332211 235699999988887 555777777999987655432211 123355777888
Q ss_pred CCcEEEEeeCCeEEEEecccCCCCCeeeeeec-------CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEe
Q 023822 172 QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVG-------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 172 ~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (276)
++.+.+++.++-|..||..+... ..+... .....|.++...++|+.|..|+.++-|..||..+++.....
T Consensus 367 ~g~lWiGt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 367 DKNLWIGTNDGGLNLYNPITQRF---TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp TSCEEEEESSSCEEEECTTTCCE---EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred CCCEEEEECCCCeEEEcCCCCcE---EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 89888877777899999876431 122111 12356889998888885666777777999998877654322
Q ss_pred ec-CCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 245 NV-KPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 245 ~~-~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.. .......|.++...++|++.+... +|
T Consensus 444 ~~~~~l~~~~v~~i~~d~~g~lwigt~-~G 472 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDGEGNLWLGTL-SA 472 (795)
T ss_dssp TTTSCCSCSCEEEEEECSSSCEEEEES-SC
T ss_pred cCCCCcCCCeeEEEEECCCCCEEEEec-Cc
Confidence 10 001345789999998888655543 44
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.89 E-value=7.5e-06 Score=63.70 Aligned_cols=204 Identities=10% Similarity=0.051 Sum_probs=126.4
Q ss_pred CcEEEEEEcCCCCE-EEEeecCCeEEEEEccCCeee-eeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCc
Q 023822 35 GRISSMDFHKSSSY-LVTASDDESIRLYDVTAATCL-KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (276)
Q Consensus 35 ~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~ 112 (276)
.....++|.+.+.. +.+-...+.|..+++..+... ..+...-.....+++.+.+..|+.+... .+.|.++++....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE--TNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSCS
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC--CCEEEEEECCCCc
Confidence 34668999985444 455556788999998765322 1222222356788998877777666542 7889999987544
Q ss_pred eeeeecccCcceEEEEeccCCCEEEEee--CCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--CCeEEE
Q 023822 113 YLRYFKGHHDRVVSLSLCSSKDCFISGS--LDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--GGYIRM 186 (276)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d~~i~~ 186 (276)
....+.........+++.|.+..|+.+. ..+.|...++......... .......+++++++..|..+. .+.|..
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 3333333445578999998766555554 3578888887643322222 223345799998665444444 689999
Q ss_pred EecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 187 FDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 187 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
+|+..... . .+ ..........+++.. +.++.+-...+.|..++..+|+....+.
T Consensus 193 ~d~dG~~~--~-~~-~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 193 SNLDGTNR--Q-AV-VKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EETTSCSC--E-EE-ECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EcCCCCce--E-EE-ecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 99875332 1 11 122334566777753 3445555567889999987777655544
No 271
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.88 E-value=1.6e-06 Score=67.64 Aligned_cols=178 Identities=13% Similarity=0.094 Sum_probs=112.0
Q ss_pred ceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecc--------------------cCcceEEEEecc-CCCEE
Q 023822 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKG--------------------HHDRVVSLSLCS-SKDCF 136 (276)
Q Consensus 78 ~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~--------------------~~~~i~~~~~~~-~~~~l 136 (276)
....++|.++++.++++.. ++.|..|+..+++.. .+.. ....+..+++.+ +++ |
T Consensus 20 ~p~~i~~d~~g~~l~v~~~---~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l 94 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQ---DGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-L 94 (322)
T ss_dssp CCCCEECCTTCSSEEEECT---TSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-E
T ss_pred CceEEEEcCCCCEEEEEcC---CCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-E
Confidence 4567889998886777766 889999988765432 2210 113468899997 554 5
Q ss_pred EEeeCCCeEEEEeccCceeeeeE------eecCCCeeEecC-CCcEEEEeeC------------------CeEEEEeccc
Q 023822 137 ISGSLDRTVLLWDQRAEKCQGLL------RVQGRPAAAYDD-QGLVFAVAFG------------------GYIRMFDARK 191 (276)
Q Consensus 137 ~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~-~~~~l~~~~d------------------~~i~~~d~~~ 191 (276)
+.+...+.|..+|..+++..... .......+++.+ +|+++++... +.|..||..+
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 55555566888987755422211 112245689999 8987776532 6788888765
Q ss_pred CCCCCeeeeeecCCCCCceEEEECCCCcEEEEe-ecCCcEEEEECCCCc--EEEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 192 YEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGT--LLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 192 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
++. ... .........++++|+|+.|+.+ ...+.|.+|++.... ....+.. ..+ ...+++.++|++.++
T Consensus 175 ~~~---~~~--~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 175 KET---TLL--LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp TEE---EEE--EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEE
T ss_pred CEE---EEe--ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEE
Confidence 331 111 1112346779999999866665 556889999987421 1222221 123 678899999986655
Q ss_pred e
Q 023822 269 G 269 (276)
Q Consensus 269 ~ 269 (276)
.
T Consensus 246 ~ 246 (322)
T 2fp8_A 246 S 246 (322)
T ss_dssp E
T ss_pred e
Confidence 4
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.87 E-value=1.2e-05 Score=62.52 Aligned_cols=211 Identities=12% Similarity=0.033 Sum_probs=124.8
Q ss_pred EEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC----CceeeeecccCcc
Q 023822 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYLRYFKGHHDR 123 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~ 123 (276)
+|+.+.. ..|+..|+.+.+....+.. ......++|.+.+..++.+... .+.|..+++.. ......+...-..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 3444433 4689999887665444432 3457889999988777777652 78999999876 2222223222234
Q ss_pred eEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCC-cEEEEee-C-CeEEEEecccCCCCCe
Q 023822 124 VVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAF-G-GYIRMFDARKYEKGPF 197 (276)
Q Consensus 124 i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~-~~l~~~~-d-~~i~~~d~~~~~~~~~ 197 (276)
...+++.+.+. ++++-...+.|.+.|+........+. ......++++|.+ .++.+.. . +.|..+++.....
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~--- 155 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--- 155 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe---
Confidence 57889986544 55555667899999987654333332 2345688999855 4444444 3 6888888764221
Q ss_pred eeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 198 DIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 198 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
...........+.++++|++..|+.+. ..+.|..+|+.. .....+............+++.. +.++++
T Consensus 156 -~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~-~~ly~~ 224 (316)
T 1ijq_A 156 -YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-DKVFWT 224 (316)
T ss_dssp -EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-TEEEEE
T ss_pred -EEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEEC-CEEEEE
Confidence 111122334678999999776666654 557899999864 33333321111223456777743 443333
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.83 E-value=7.6e-06 Score=64.02 Aligned_cols=229 Identities=9% Similarity=0.043 Sum_probs=123.0
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee---eeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN---SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 110 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~ 110 (276)
...+.++.|.+ +..++ ++.++.|.. ..+.|+.-.... .....+..+.+.+++..++.+. ++.|.. ....
T Consensus 79 ~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~g~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN----VGAIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET----TCCEEE-ESST
T ss_pred CccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC----CccEEE-EcCC
Confidence 44688999986 44444 456675544 333343322222 1223466777776666555543 554422 1222
Q ss_pred Cceee-eecccCcceEEEEeccCCCEEEEeeCCCeEEEEec--cCceeeeeEeecCCCeeEecCCCcEEEEeeCCeEEEE
Q 023822 111 NKYLR-YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVFAVAFGGYIRMF 187 (276)
Q Consensus 111 ~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~~~ 187 (276)
++.-. ........+..+.+.+++.+++.+...+..+-.|- .+-+............+.+.+++.+++++.+|.+++.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 32222 22344567889999998887766654333333342 2222221112233456778899998888888888776
Q ss_pred ecccCCCCCeeeeeec--CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcE
Q 023822 188 DARKYEKGPFDIFSVG--GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 265 (276)
Q Consensus 188 d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 265 (276)
+...++. ....... .....+..+++.+++.+++++ .+|.| .+....|+.-..+.........+.++.|.++++
T Consensus 231 ~~D~G~t--W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~- 305 (327)
T 2xbg_A 231 DPDNSEN--WGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ- 305 (327)
T ss_dssp ETTEEEE--ECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-
T ss_pred cCCCCCe--eEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-
Confidence 4221111 0011111 112357889999888866665 46666 445455554444432111345678888876665
Q ss_pred EEEecCCCCC
Q 023822 266 VISGRVSPFS 275 (276)
Q Consensus 266 l~~~~~dg~v 275 (276)
+++++.+|.+
T Consensus 306 ~~~~G~~G~i 315 (327)
T 2xbg_A 306 GFILGQKGIL 315 (327)
T ss_dssp EEEECSTTEE
T ss_pred eEEEcCCceE
Confidence 4455566653
No 274
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.83 E-value=2e-05 Score=62.26 Aligned_cols=227 Identities=10% Similarity=0.050 Sum_probs=125.9
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCee--eeeee---eeeeceEEEEEecc---CCeEEEeccCCCC---Cc
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATC--LKTIN---SKKYGVDLVCFTSH---PTTVIYSSKNGWD---ES 102 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~~~~d---~~ 102 (276)
-..-..++|.|+|+++++ ..+|.|++++ +++. +..+. ........++++|+ +..++++.....+ ..
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345678999999985554 5679999998 4432 22121 11346789999998 6666665431001 67
Q ss_pred eEEEEccCCc-----ee-eeec---ccCcceEEEEeccCCCEEEEeeC-------------CCeEEEEeccCc-------
Q 023822 103 LRLLSLHDNK-----YL-RYFK---GHHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAE------- 153 (276)
Q Consensus 103 i~~~d~~~~~-----~~-~~~~---~~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~------- 153 (276)
|..++...++ .+ ..+. ........++|.|+|.++++.+. .|.|..++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 8888876432 11 1122 11112368999999986666432 256766665531
Q ss_pred -----eeeeeE--eecCCCeeEecC-CCcEEEEeeC-Ce--------EEEEecccCCC------------C--Ceeeeee
Q 023822 154 -----KCQGLL--RVQGRPAAAYDD-QGLVFAVAFG-GY--------IRMFDARKYEK------------G--PFDIFSV 202 (276)
Q Consensus 154 -----~~~~~~--~~~~~~~~~~~~-~~~~l~~~~d-~~--------i~~~d~~~~~~------------~--~~~~~~~ 202 (276)
.....+ .......++|+| ++.++++-.. +. |.+.. .+.. . .......
T Consensus 187 ~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 187 LGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred cCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeEec
Confidence 011111 112245789999 6777776652 22 33332 2210 0 0011122
Q ss_pred cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcE------EEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 203 GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL------LSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
. +......++| .+|.++++.-..+.|...++..... ...+. .....+..+++.|||.++++..
T Consensus 265 ~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~---~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 P-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL---SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp T-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE---ESSCCEEEEEECTTSCEEEEEC
T ss_pred C-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec---ccCCCeeEEEECCCCcEEEEEe
Confidence 1 2234567777 4677666655667788877654331 12222 1236789999999998766653
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.81 E-value=2.1e-05 Score=68.99 Aligned_cols=231 Identities=10% Similarity=0.004 Sum_probs=142.5
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee---------eeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN---------SKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
...|.++...++|. |-.|+.++-|..++..+........ .....|.++...+++. +.+++. ++-|.
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~---~~Gl~ 386 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTD---GGGIN 386 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEB---SSCEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeC---CCcEE
Confidence 45789999988876 5556666678888876543222110 1234588888876665 445554 56688
Q ss_pred EEEccCCceeeee---cccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE----eecCCCeeEecCCCcEEE
Q 023822 105 LLSLHDNKYLRYF---KGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL----RVQGRPAAAYDDQGLVFA 177 (276)
Q Consensus 105 ~~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~l~ 177 (276)
.|+..+++..... ......|.++...+++++ ..|+.++-|..+|.++++..... ....+.++...+++.+.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE
Confidence 8987654332211 123457889888877764 44676677999998776543322 123455777788888777
Q ss_pred EeeCCeEEEEecccCCCCCeeeee-ecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC-CCCCCceE
Q 023822 178 VAFGGYIRMFDARKYEKGPFDIFS-VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-PVSRNSTL 255 (276)
Q Consensus 178 ~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~ 255 (276)
++. +.+..||..+.+........ .......|.++...++|++.+ |+.++-+..||..+++.. .+... ......|.
T Consensus 466 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQYEGFCSNTIN 542 (781)
T ss_dssp EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECTTTTCSCSCEE
T ss_pred EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccCCCCCCCCeeE
Confidence 766 67899998764432111000 001135688999999988555 555344788997665543 33311 11345789
Q ss_pred EEEECCCCcEEEEecCCCC
Q 023822 256 EASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 256 ~~~~s~~g~~l~~~~~dg~ 274 (276)
++...++|.+.++.. +|.
T Consensus 543 ~i~~d~~g~lWi~T~-~Gl 560 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG-EGL 560 (781)
T ss_dssp EEEECTTSCEEEEET-TEE
T ss_pred EEEECCCCCEEEEEC-CCc
Confidence 999999998665543 553
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.80 E-value=2.4e-05 Score=68.14 Aligned_cols=207 Identities=8% Similarity=0.010 Sum_probs=126.6
Q ss_pred CCcEEEEEEcCCCCEE-EEeecCCeEEEEEccCC----eeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 34 NGRISSMDFHKSSSYL-VTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
...+..|+|.+.+..| ++-...+.|+.+++... .....+.........|++.+.+..|+.+... .+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~--~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC--CCeEEEEeC
Confidence 4567789999854444 45556678888888642 2222233233456789999888888777653 789999998
Q ss_pred cCCceeeeecccCcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEEee--CC
Q 023822 109 HDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAF--GG 182 (276)
Q Consensus 109 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~--d~ 182 (276)
........+...-.....|++.|.+..|+.+.. .+.|...++........+. ......+++++.+..|..+. .+
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 765443333334455789999997665555543 3689888887654433332 23456799997655444444 58
Q ss_pred eEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 183 YIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 183 ~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.|..+++..... ..+............|++.. ++++++-...+.|...|..+|+.+..+.
T Consensus 581 ~I~~~d~dG~~~--~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 581 SISSIDVNGGNR--KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEEETTSCSC--EEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred cEEEEecCCCce--EEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 899999865332 11222112222345666633 3444444456788889887887666654
No 277
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.79 E-value=9.9e-07 Score=74.33 Aligned_cols=147 Identities=9% Similarity=-0.005 Sum_probs=90.1
Q ss_pred CCEEEEeecCCeEEEEEccCCeeeeeeeeeee----ceEE-EEEeccCCeEEEeccC---CCCCceEEEEccCCceeeee
Q 023822 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKY----GVDL-VCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRYF 117 (276)
Q Consensus 46 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~~~~---~~d~~i~~~d~~~~~~~~~~ 117 (276)
+..++.++.|+.+..+|..+|+.+-....... .+.. ... .+..++++... +.++.|..+|..+++.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 45677888899999999999998776543220 1211 111 23455555431 11589999999999988766
Q ss_pred cccCcc--------------------------------------eEEEEeccCCCEEEEeeCC----------------C
Q 023822 118 KGHHDR--------------------------------------VVSLSLCSSKDCFISGSLD----------------R 143 (276)
Q Consensus 118 ~~~~~~--------------------------------------i~~~~~~~~~~~l~~~~~d----------------~ 143 (276)
...... ...+++.++...++.+..+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 432111 0134566666666665532 3
Q ss_pred eEEEEeccCceeeeeEeecC--------CCe-eEe--cCCCc---EEEEee-CCeEEEEecccCCC
Q 023822 144 TVLLWDQRAEKCQGLLRVQG--------RPA-AAY--DDQGL---VFAVAF-GGYIRMFDARKYEK 194 (276)
Q Consensus 144 ~i~iwd~~~~~~~~~~~~~~--------~~~-~~~--~~~~~---~l~~~~-d~~i~~~d~~~~~~ 194 (276)
.|..+|.++++.+-.++... ... +.. ..+++ +++.+. +|.++++|.++++.
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 338 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNL 338 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCE
Confidence 69999999998776663221 111 112 23563 455555 89999999988653
No 278
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.76 E-value=1.8e-05 Score=61.47 Aligned_cols=197 Identities=13% Similarity=0.163 Sum_probs=120.4
Q ss_pred CCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEecc----CCe--EEEeccCCC--CCceEEEEcc-CCceee
Q 023822 45 SSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH----PTT--VIYSSKNGW--DESLRLLSLH-DNKYLR 115 (276)
Q Consensus 45 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~~~~~~~~--d~~i~~~d~~-~~~~~~ 115 (276)
...+++.....+-+.+||+ +|+.++.+.. +.++.+..-|. ++. ++.++. .. +++|.+|++. ....+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~-R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASN-RSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEE-CSTTCCEEEEEEECTTTCCEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeC-CCCCCCeEEEEEECCCCCcee
Confidence 3445666667788999999 8888888754 34555555552 222 444443 22 4789999773 222344
Q ss_pred eecc------cC-cceEEEEe--ccC-CC-EEEEeeCCCeEEEEecc-------CceeeeeEee-cCCCeeEecCCCcEE
Q 023822 116 YFKG------HH-DRVVSLSL--CSS-KD-CFISGSLDRTVLLWDQR-------AEKCQGLLRV-QGRPAAAYDDQGLVF 176 (276)
Q Consensus 116 ~~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~d~~i~iwd~~-------~~~~~~~~~~-~~~~~~~~~~~~~~l 176 (276)
.+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++.+.. ..+..+...+....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 4421 11 45666777 664 43 67788889999999983 3355566633 334567777766666
Q ss_pred EEee-CCeEEEEecccCCCC-Ceeeeee--cCCCCCceEEEE--CCCCc-EEEEee-cCCcEEEEECC-CCcEEEEee
Q 023822 177 AVAF-GGYIRMFDARKYEKG-PFDIFSV--GGDISDANVVKF--SNDGR-LMLLTT-MEGHIHVLDSF-RGTLLSTYN 245 (276)
Q Consensus 177 ~~~~-d~~i~~~d~~~~~~~-~~~~~~~--~~~~~~i~~~~~--~~~~~-~l~~~~-~dg~i~i~d~~-~~~~~~~~~ 245 (276)
..+. +..|..|+.+..... ...+... ..-...+..|++ .++++ ||++++ .++...+||.. +.+.+..|.
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 6666 655666664432211 1112222 222236777887 45555 676666 56799999996 677887775
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=3.8e-05 Score=61.76 Aligned_cols=203 Identities=13% Similarity=0.029 Sum_probs=124.5
Q ss_pred EEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC----ceeeeecccCcc
Q 023822 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFKGHHDR 123 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~ 123 (276)
+|+.+ ....|+..++........+. ....+..++|.+.+..|+.+... .+.|+.+++... .....+......
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC------CCCEEEECSSCSC
T ss_pred eeEEe-ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecC--CCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 44444 34689999987655443333 34467899999988888777653 688998988652 222333323445
Q ss_pred eEEEEeccC-CCEEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEEee---CCeEEEEecccCCCCCe
Q 023822 124 VVSLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAF---GGYIRMFDARKYEKGPF 197 (276)
Q Consensus 124 i~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~---d~~i~~~d~~~~~~~~~ 197 (276)
...+++.+. ++++++-...+.|.+.+++.......+. ......++++|.+..|..+. .+.|...++.....
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~--- 237 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--- 237 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---
Confidence 678999874 5555555667899999988665443332 23356889998654444443 37888888865332
Q ss_pred eeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEE
Q 023822 198 DIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 259 (276)
Q Consensus 198 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~ 259 (276)
...........+.++++|++..|+.+. ..+.|..+|+..... ..+............+++
T Consensus 238 -~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 238 -YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp -EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEE
T ss_pred -EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEE
Confidence 122223335678999998777776664 457899999754433 333211112234556666
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.76 E-value=2.6e-07 Score=79.71 Aligned_cols=206 Identities=8% Similarity=0.040 Sum_probs=123.1
Q ss_pred CcEEEEEEcCCCCEEEEe-ecCCeEEEEEccC----CeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc
Q 023822 35 GRISSMDFHKSSSYLVTA-SDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
..+..++|.+.+..|+.+ ...+.|+.+++.. ......+.........+++.+.+..|+++... .+.|.++++.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~--~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT--TSCEEEEBSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc--CCeEEEEecC
Confidence 345688999876666655 3567899998875 22222222222245678887666666666432 7889999987
Q ss_pred CCceeeeecccCcceEEEEeccCCCEEEEeeC-C-CeEEEEeccCceeeeeE--eecCCCeeEecCCCc-EEEEee-CCe
Q 023822 110 DNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-D-RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGL-VFAVAF-GGY 183 (276)
Q Consensus 110 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~-~l~~~~-d~~ 183 (276)
.......+.........+++.|.+.+|+.+.. . +.|..+++........+ .......++++|++. ++++-. .+.
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 65443333322345678899986655554443 2 67888877643322111 233456899998754 444443 689
Q ss_pred EEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
|..+++..... ..+............+++..+ .++++....+.|..++..+++.+..+.
T Consensus 564 I~~~d~dG~~~--~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 564 ISSIDVNGGNR--KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEEECSSSSCC--EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEEccCCCce--EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEee
Confidence 99999875322 112211122233455666554 445555567899999988888877765
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.76 E-value=6.4e-06 Score=69.60 Aligned_cols=193 Identities=13% Similarity=0.059 Sum_probs=119.9
Q ss_pred CCEEEEeec-CCeEEEEEc-cCCeeeeeeeeeeec-----------eEEEEEeccCCe----EEEeccCCCCCceEEEEc
Q 023822 46 SSYLVTASD-DESIRLYDV-TAATCLKTINSKKYG-----------VDLVCFTSHPTT----VIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 46 ~~~l~~~~~-d~~i~iwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~~~~~~d~~i~~~d~ 108 (276)
+..+++++. ++.|.-+|. .+|+.+-.+...... ...+++.|.+.. +++++. ++.|.-+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa 138 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---DGNVAALNA 138 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---TSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---CCEEEEEEC
Confidence 456666676 889999999 899988776543211 123455444444 777776 999999999
Q ss_pred cCCceeeeecccCc----ceEE-EEeccCCCEEEEee------CCCeEEEEeccCceeeeeEeecCC-------------
Q 023822 109 HDNKYLRYFKGHHD----RVVS-LSLCSSKDCFISGS------LDRTVLLWDQRAEKCQGLLRVQGR------------- 164 (276)
Q Consensus 109 ~~~~~~~~~~~~~~----~i~~-~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~~~~~------------- 164 (276)
.+++.+........ .+.+ ..+. ++ .+++++ .++.|+-+|.++++.+-.+.....
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~ 216 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIK 216 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTT
T ss_pred CCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccc
Confidence 99998876543220 1111 1111 44 455554 379999999999987765532211
Q ss_pred ---------------------------CeeEecCCCcEEEEee-C----------------CeEEEEecccCCCCCeeee
Q 023822 165 ---------------------------PAAAYDDQGLVFAVAF-G----------------GYIRMFDARKYEKGPFDIF 200 (276)
Q Consensus 165 ---------------------------~~~~~~~~~~~l~~~~-d----------------~~i~~~d~~~~~~~~~~~~ 200 (276)
...++.+...++..+. + +.|..+|.++++.. -.+
T Consensus 217 ~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~--W~~ 294 (599)
T 1w6s_A 217 NPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK--FGY 294 (599)
T ss_dssp CGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE--EEE
T ss_pred cccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee--eEe
Confidence 0245556555555544 4 37899999887641 112
Q ss_pred eecCCCC-------CceEEEEC-CCC---cEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 201 SVGGDIS-------DANVVKFS-NDG---RLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 201 ~~~~~~~-------~i~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
....|.. ...-+... .+| +.++.++.+|.++++|..+|+.+....
T Consensus 295 q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp ESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 2222211 11112222 467 567778999999999999999987765
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=1.6e-05 Score=69.74 Aligned_cols=229 Identities=13% Similarity=0.126 Sum_probs=140.2
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee--------------eeeeceEEEEEeccCCeEEEeccCCC
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN--------------SKKYGVDLVCFTSHPTTVIYSSKNGW 99 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~~~~~ 99 (276)
...|.++...++|. |..|+..+-|.++|..+++...... .....|.++...+++. +.+++.
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~--- 331 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTW--- 331 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEB---
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEec---
Confidence 35688888888776 4445554558888887654322111 1234688888877765 455554
Q ss_pred CCceEEEEccCCceeeeec---------ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE-----eecCCC
Q 023822 100 DESLRLLSLHDNKYLRYFK---------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL-----RVQGRP 165 (276)
Q Consensus 100 d~~i~~~d~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-----~~~~~~ 165 (276)
++-|..++..+........ -....|.++...++++ |..|+.++-|..||..+....... ....+.
T Consensus 332 ~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~ 410 (781)
T 3v9f_A 332 GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL 410 (781)
T ss_dssp SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEE
T ss_pred CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE
Confidence 6778888876554322110 0235688998887776 455666667899998765433221 123355
Q ss_pred eeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeee-cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEe
Q 023822 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSV-GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 166 ~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (276)
++...+++.+.++..++.+..+|.++.+. ..+.. ......|.++...++|.+.+ |+. +-|..||..+++.....
T Consensus 411 ~i~~d~~g~lWigt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 411 CSLKDSEGNLWFGTYLGNISYYNTRLKKF---QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp EEEECTTSCEEEEETTEEEEEECSSSCEE---EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEE
T ss_pred EEEECCCCCEEEEeccCCEEEEcCCCCcE---EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecc
Confidence 67777888888877677899998865331 11111 12345788899888887554 445 45889998776654332
Q ss_pred ecC--CCCCCceEEEEECCCCcEEEEecCCC
Q 023822 245 NVK--PVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 245 ~~~--~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
... ......|.++...++|++.+....+|
T Consensus 486 ~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 486 DTSNSQLLENFVRSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp CTTTSSCSCSCEEEEEECTTCCEEEEESSSC
T ss_pred cCcccccccceeEEEEEcCCCCEEEEEcCCC
Confidence 211 01246789999999988666554344
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.71 E-value=4.4e-05 Score=59.38 Aligned_cols=204 Identities=11% Similarity=0.041 Sum_probs=121.1
Q ss_pred EEEEeecCCeEEEEEccCCe-eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCcee-eeecccCcceE
Q 023822 48 YLVTASDDESIRLYDVTAAT-CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYL-RYFKGHHDRVV 125 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~i~ 125 (276)
+|+.+. ...|+..++.... ..............+.|.+.+..|+.+... .+.|..+++...... ..+...-....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT--TTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC--CCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 344433 4579999987653 122222223356789999987777777653 788999998766422 22222223456
Q ss_pred EEEeccC-CCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCc-EEEEee--CCeEEEEecccCCCCCeee
Q 023822 126 SLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGL-VFAVAF--GGYIRMFDARKYEKGPFDI 199 (276)
Q Consensus 126 ~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~-~l~~~~--d~~i~~~d~~~~~~~~~~~ 199 (276)
.+++.+. ++++++-...+.|.++++......... .......++++|.+. ++.+.. .+.|..+++..... .
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~----~ 158 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----F 158 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC----E
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe----E
Confidence 7888874 445555556789999998764332222 223345789998654 444432 47888888764321 1
Q ss_pred eeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECC
Q 023822 200 FSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 261 (276)
Q Consensus 200 ~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (276)
..........+.++++|++..|+.+. ..+.|..+|+... ....+.. ........+++..
T Consensus 159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~--~~~~~P~glav~~ 218 (318)
T 3sov_A 159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVK--GSLPHPFALTLFE 218 (318)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEC--SCCSCEEEEEEET
T ss_pred EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEec--CCCCCceEEEEeC
Confidence 11222334578999999766666654 5678999997543 3333321 2334556666643
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=6.5e-05 Score=61.58 Aligned_cols=232 Identities=10% Similarity=0.130 Sum_probs=132.6
Q ss_pred cEEEEEEcC-CCCEEEEee-cCCeEEEEEccCCeeeeeeeee---eeceEEEEE-------eccCCeEEEeccCCC----
Q 023822 36 RISSMDFHK-SSSYLVTAS-DDESIRLYDVTAATCLKTINSK---KYGVDLVCF-------TSHPTTVIYSSKNGW---- 99 (276)
Q Consensus 36 ~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~~~~---- 99 (276)
....|+|.| +...|+.+. ..+.|++.|++++......... ......++| .+++++++++...+.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356899998 344455444 3467899998877765544322 235789999 999997877765210
Q ss_pred CCceEEEEccC-Ccee-----eeecccCcceEEEEeccC-CCEEEEeeCCCeEEEEecc-------Ccee----------
Q 023822 100 DESLRLLSLHD-NKYL-----RYFKGHHDRVVSLSLCSS-KDCFISGSLDRTVLLWDQR-------AEKC---------- 155 (276)
Q Consensus 100 d~~i~~~d~~~-~~~~-----~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~iwd~~-------~~~~---------- 155 (276)
...|.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 11366665433 2221 222211 23457788995 4556666678889999997 4443
Q ss_pred -eee-Eee---cCCCeeEecCCCcEEEEee--CCeEEEEecccCCCC---Ceeeeee---cC---------CCCCce-EE
Q 023822 156 -QGL-LRV---QGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKG---PFDIFSV---GG---------DISDAN-VV 212 (276)
Q Consensus 156 -~~~-~~~---~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~---~~~~~~~---~~---------~~~~i~-~~ 212 (276)
... +.. .....++++|++..|..+. .+.|+.++....... +..+.-. .+ .-.... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 112 211 2245799999998544444 688999775432110 0111111 00 111234 45
Q ss_pred EEC-------CCCcEEEEeecCCcEEEEECCCCcEEEEeecCC-----------C----------CCCceEEEEECCC-C
Q 023822 213 KFS-------NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP-----------V----------SRNSTLEASFSPE-G 263 (276)
Q Consensus 213 ~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----------~----------~~~~v~~~~~s~~-g 263 (276)
+.. ++|.++++=....+|+.++ .+|.. .++.... + .-.....|+++++ |
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 554 4667666666778999999 56644 3443210 0 1134678999997 6
Q ss_pred cEEEEec
Q 023822 264 MFVISGR 270 (276)
Q Consensus 264 ~~l~~~~ 270 (276)
.++++=.
T Consensus 457 ~lyVaD~ 463 (496)
T 3kya_A 457 MFYVHDQ 463 (496)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 6555433
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.62 E-value=1.5e-05 Score=67.23 Aligned_cols=148 Identities=12% Similarity=0.044 Sum_probs=90.0
Q ss_pred CCEEEEeecCCeEEEEEccCCeeeeeeeeeee----ceE-EEEEecc---CC-eEEEeccC---CCCCceEEEEccCCce
Q 023822 46 SSYLVTASDDESIRLYDVTAATCLKTINSKKY----GVD-LVCFTSH---PT-TVIYSSKN---GWDESLRLLSLHDNKY 113 (276)
Q Consensus 46 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~v~-~~~~~~~---~~-~l~~~~~~---~~d~~i~~~d~~~~~~ 113 (276)
+..++.++.|+.|.-+|.++|+.+-....... .+. ......+ ++ .++++... +.++.|.-+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45677888899999999999998866653321 111 1111111 23 55554421 1278999999999988
Q ss_pred eeeecccCcc-----------------------------------------eEEEEeccCCCEEEEeeC-----------
Q 023822 114 LRYFKGHHDR-----------------------------------------VVSLSLCSSKDCFISGSL----------- 141 (276)
Q Consensus 114 ~~~~~~~~~~-----------------------------------------i~~~~~~~~~~~l~~~~~----------- 141 (276)
+......... -..+++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 7755321100 012455666666666552
Q ss_pred ---------C----CeEEEEeccCceeeeeEeecC--------CC-eeEec---CCC---cEEEEee-CCeEEEEecccC
Q 023822 142 ---------D----RTVLLWDQRAEKCQGLLRVQG--------RP-AAAYD---DQG---LVFAVAF-GGYIRMFDARKY 192 (276)
Q Consensus 142 ---------d----~~i~iwd~~~~~~~~~~~~~~--------~~-~~~~~---~~~---~~l~~~~-d~~i~~~d~~~~ 192 (276)
| +.|..+|.++++.+-.++... .. .+... .++ .+++.+. +|.++++|.+++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG 356 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG 356 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC
Confidence 2 589999999998876663321 11 12222 356 3555555 899999998876
Q ss_pred C
Q 023822 193 E 193 (276)
Q Consensus 193 ~ 193 (276)
+
T Consensus 357 ~ 357 (582)
T 1flg_A 357 K 357 (582)
T ss_dssp C
T ss_pred C
Confidence 5
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.62 E-value=0.00012 Score=62.41 Aligned_cols=203 Identities=8% Similarity=0.001 Sum_probs=128.6
Q ss_pred CcEEEEEEcCCCCEEE-EeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce
Q 023822 35 GRISSMDFHKSSSYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 113 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~ 113 (276)
..+..++|++.+..|+ +-..++.|+.+++........+.........+++.+.+..|+.+... .+.|.+.++.....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~--~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG--TNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSTTC
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC--CCEEEEEecCCCcE
Confidence 4577999999665555 44567899999987544333333222457789998887877777652 78899999875543
Q ss_pred eeeecccCcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeeeE-eecCCCeeEecCCCcEEEEee--CCeEEEEe
Q 023822 114 LRYFKGHHDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLL-RVQGRPAAAYDDQGLVFAVAF--GGYIRMFD 188 (276)
Q Consensus 114 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d 188 (276)
...+...-.....+++.|....|+.... .+.|...++......... .......+++++++..|..+. .+.|..+|
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d 194 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSN 194 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEc
Confidence 2223233445689999986555555442 567888887755433322 233455799999765555444 68999999
Q ss_pred cccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 189 ARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
+..... .... ........+++.. +.++++-...+.|...|..+++....+.
T Consensus 195 ~dG~~~---~v~~--~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 195 MLGLNR---EVIA--DDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp TTSCSC---EEEE--ECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCce---EEee--ccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 876433 1221 2223456777765 4444444457889999987776555443
No 287
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.59 E-value=0.00012 Score=57.87 Aligned_cols=235 Identities=11% Similarity=0.059 Sum_probs=131.0
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCe-eeeeee---eeeeceEEEEEecc---CCeEEEeccC-CCC----C
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAAT-CLKTIN---SKKYGVDLVCFTSH---PTTVIYSSKN-GWD----E 101 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~~-~~d----~ 101 (276)
-.....++|.|+|++++ +..+|.|++++ .+++ .+..+. ........++++|+ +..|.++... ..+ .
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34567999999998555 45669999997 4554 222211 12345789999998 6666655430 002 5
Q ss_pred ceEEEEccCC--c-----ee-eeecc-cCcceEEEEeccCCCEEEEeeC-------------CCeEEEEeccCc------
Q 023822 102 SLRLLSLHDN--K-----YL-RYFKG-HHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAE------ 153 (276)
Q Consensus 102 ~i~~~d~~~~--~-----~~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~------ 153 (276)
.|..|+.... . .+ ..+.. .......|+|.|+|.++++.+. .|+|..++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6777776544 1 11 11221 1112467999999987666432 256666665432
Q ss_pred ---eeeeeEeecCCCeeEecC-CCcEEEEeeC----CeEEEEecccC--------CC--C--CeeeeeecCCCCCceEEE
Q 023822 154 ---KCQGLLRVQGRPAAAYDD-QGLVFAVAFG----GYIRMFDARKY--------EK--G--PFDIFSVGGDISDANVVK 213 (276)
Q Consensus 154 ---~~~~~~~~~~~~~~~~~~-~~~~l~~~~d----~~i~~~d~~~~--------~~--~--~~~~~~~~~~~~~i~~~~ 213 (276)
..+..........++|+| ++.++++-.. ..|.+...... .. . .............+..++
T Consensus 186 f~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~ 265 (354)
T 3a9g_A 186 FPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGAS 265 (354)
T ss_dssp STTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEE
T ss_pred CCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceE
Confidence 011111223355899999 6777776652 23444322110 00 0 001112211223567788
Q ss_pred EC-------CCCcEEEEeecCCcEEEEECCCC-cEEEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 214 FS-------NDGRLMLLTTMEGHIHVLDSFRG-TLLSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 214 ~~-------~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
|. .+|.++++.-..+.|...++... +..............+..+++.|||.++++..
T Consensus 266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 84 56777776666778888888753 33211111112346789999999998766654
No 288
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.59 E-value=4.9e-05 Score=59.72 Aligned_cols=194 Identities=9% Similarity=0.127 Sum_probs=113.7
Q ss_pred cEEEEEEcCCCCEEEEee------------cCCeEEEEEccCC-eeeeeee--e-----eeeceEEEEEec--cCC-eEE
Q 023822 36 RISSMDFHKSSSYLVTAS------------DDESIRLYDVTAA-TCLKTIN--S-----KKYGVDLVCFTS--HPT-TVI 92 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~-~~~~~~~--~-----~~~~v~~~~~~~--~~~-~l~ 92 (276)
..-.++..|+|..+++++ .+|.|.++|.++. .....+. + .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 445677788775555542 6899999998732 1122222 1 123567777766 343 465
Q ss_pred EeccCCCCCceEEEEccCCce----eeeeccc-CcceEEEEeccCCCEEEEee-----------------CCCeEEEEec
Q 023822 93 YSSKNGWDESLRLLSLHDNKY----LRYFKGH-HDRVVSLSLCSSKDCFISGS-----------------LDRTVLLWDQ 150 (276)
Q Consensus 93 ~~~~~~~d~~i~~~d~~~~~~----~~~~~~~-~~~i~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~ 150 (276)
++.....+..|.+|++..... +..+.+. -...+.+.+.++|.++++.. ..|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 554422257788888765422 2233322 23578999999998777654 1245666665
Q ss_pred cCceeeeeE-eecCCCeeEecCCCcEEEEee--CCeEEEEecccCC-CCCeeeeeecCCCCCceEEEECC-CCcEEEEee
Q 023822 151 RAEKCQGLL-RVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYE-KGPFDIFSVGGDISDANVVKFSN-DGRLMLLTT 225 (276)
Q Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 225 (276)
. +..... .....+.++|+|+++.+..+. .+.|..|++.... ......+. .......+++.+ +|++.+++.
T Consensus 211 ~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 211 N--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp T--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCCEEEEEE
T ss_pred C--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCcEEEEec
Confidence 3 222222 334566899999997776665 6899999986422 11111221 235567899999 598777665
Q ss_pred cC-CcEEEEE
Q 023822 226 ME-GHIHVLD 234 (276)
Q Consensus 226 ~d-g~i~i~d 234 (276)
.+ +.|..|+
T Consensus 286 ~~g~~v~~~~ 295 (355)
T 3sre_A 286 PNGMRIFFYD 295 (355)
T ss_dssp SCHHHHHSCC
T ss_pred CCceEEEEEC
Confidence 33 2344344
No 289
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.58 E-value=6.3e-06 Score=71.90 Aligned_cols=189 Identities=10% Similarity=0.038 Sum_probs=106.8
Q ss_pred ceEEEEEe-ccCCeEEEeccCCCC--CceEEEEccCC-ceee-eecccCcceEEEEeccCCCEEEEeeCC-----CeEEE
Q 023822 78 GVDLVCFT-SHPTTVIYSSKNGWD--ESLRLLSLHDN-KYLR-YFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLL 147 (276)
Q Consensus 78 ~v~~~~~~-~~~~~l~~~~~~~~d--~~i~~~d~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~i 147 (276)
.+...+|+ ||+++++.+...+.+ ..|+++|+.++ +.+. .+. .....+.|+||++.|+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 999999877642111 35999999988 6322 121 123568899999877776655 36888
Q ss_pred EeccCceee--eeEeec---CCCeeEecCCCcEEEEee----CCeEEEEecccCCCCC-eeeeeecCCCCCceEEEECCC
Q 023822 148 WDQRAEKCQ--GLLRVQ---GRPAAAYDDQGLVFAVAF----GGYIRMFDARKYEKGP-FDIFSVGGDISDANVVKFSND 217 (276)
Q Consensus 148 wd~~~~~~~--~~~~~~---~~~~~~~~~~~~~l~~~~----d~~i~~~d~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~ 217 (276)
+++.+++.. ..+... ....+.|+|++++|+... ...|+++|+.+..... .... .........++.|+.+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l-~~~~~~~~~s~~~~~g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIV-RPREKGVRYDVQMHGT 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEES-SCCCTTCCEEEEEETT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEe-ecCCCCceEEEeeeeC
Confidence 888776432 222211 123578999998777655 3578888987653222 0111 1222334455555444
Q ss_pred CcEEEEeecC----CcEEEEECCCC-cEEE-EeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 218 GRLMLLTTME----GHIHVLDSFRG-TLLS-TYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 218 ~~~l~~~~~d----g~i~i~d~~~~-~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+.+++....+ ..|..+++.++ +... .+. + .....+..+.+. .+.++++...+|
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~-~-~~~~~l~~~~~~-~~~lv~~~~~~g 389 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVD-H-SEDVFMESIAVR-SNYLVVAGRRAG 389 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEEC-C-CSSEEEEEEEEC-SSEEEEEEEETT
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEEC-C-CCCcEEEEEEEE-CCEEEEEEEeCC
Confidence 4444444443 35777777653 2222 222 1 112245555554 234444444444
No 290
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.57 E-value=9.3e-05 Score=57.19 Aligned_cols=186 Identities=11% Similarity=0.094 Sum_probs=107.4
Q ss_pred CcEEEEEEcCCCCEEEEeecC--CeEEEEEccCCeeeeeeeee-eeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC
Q 023822 35 GRISSMDFHKSSSYLVTASDD--ESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 111 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~ 111 (276)
.....+++.++++++++.... ..|..++..+++........ ......++..+++..+++-.. ++.|+.+|..++
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~---~g~i~~~d~~~~ 148 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY---RGAIWLIDVVQP 148 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT---TTEEEEEETTTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC---CCeEEEEeCCCC
Confidence 467889999999866655432 24667777777654322211 112234444444433333333 788888887654
Q ss_pred ce-eeee---------cccCcceEEEEeccCCCEEE-EeeCCCeEEEEeccC-cee--eeeE-eecCCCeeEecCCCcEE
Q 023822 112 KY-LRYF---------KGHHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQRA-EKC--QGLL-RVQGRPAAAYDDQGLVF 176 (276)
Q Consensus 112 ~~-~~~~---------~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~-~~~--~~~~-~~~~~~~~~~~~~~~~l 176 (276)
+. +... ...-.....+ +++++.|+ +-...+.|..+|+.. ++. ...+ .......++++++|+++
T Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~ 226 (306)
T 2p4o_A 149 SGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLY 226 (306)
T ss_dssp EEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEE
T ss_pred cEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEE
Confidence 21 1100 0111233455 77877554 445578999999875 321 1122 22346689999999887
Q ss_pred EEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEEC---CCCcEEEEeecCC
Q 023822 177 AVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFS---NDGRLMLLTTMEG 228 (276)
Q Consensus 177 ~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~l~~~~~dg 228 (276)
++.. .+.|.++|... +. ..+.........+++++|. |+++.|++++..+
T Consensus 227 va~~~~~~V~~~~~~G-~~--~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 227 GATHIYNSVVRIAPDR-ST--TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EECBTTCCEEEECTTC-CE--EEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred EEeCCCCeEEEECCCC-CE--EEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 7776 68999999752 21 1111222223467899998 8887777666543
No 291
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.55 E-value=0.00012 Score=56.10 Aligned_cols=199 Identities=15% Similarity=0.237 Sum_probs=129.0
Q ss_pred EEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC-ceeeee
Q 023822 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYLRYF 117 (276)
Q Consensus 39 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~-~~~~~~ 117 (276)
+.-.+|..+.+|.-. ..++.|+|+++.+.+..+.-.+ +|.--.|-.. +.|+..+ +..|+-|++... .+.+.+
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~-~~L~lVT----~taVyHWs~~~~s~P~kvF 143 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT----DNAVYHWSMEGESQPVKMF 143 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSS-SEEEEEE----SSEEEEEESSTTCCCEEEE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCC-CeEEEEc----CCcEEEEcccCCCCCceee
Confidence 345688888887765 5789999999998888776643 6777788644 4455554 789999999753 555666
Q ss_pred cccC----cceEEEEeccCCCEEEEeeC-------CCeEEEEeccCceeeeeEeecCCCeeEecCC-----CcEEEEee-
Q 023822 118 KGHH----DRVVSLSLCSSKDCFISGSL-------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQ-----GLVFAVAF- 180 (276)
Q Consensus 118 ~~~~----~~i~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~- 180 (276)
..|. ..|..-..+++.++++..+- .|.+.+|..+.+... .+..+......+-.+ ..+++.+.
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 222 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVR 222 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-EECCSEEEEEEECCTTCSSCEEEEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc-eeeeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 5553 46777777888887665442 367888887765432 222222222222222 23555544
Q ss_pred ---CCeEEEEecccC--CCCCeeee--e--e--cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 181 ---GGYIRMFDARKY--EKGPFDIF--S--V--GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 181 ---d~~i~~~d~~~~--~~~~~~~~--~--~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.+.+++.++... ...++... . + +....-.-++..++.-..++.-+.-|.|++||+.++.++..-+
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 268999998553 11222111 1 1 1122334567888877788888999999999999999988766
No 292
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.55 E-value=0.0001 Score=58.22 Aligned_cols=233 Identities=12% Similarity=0.108 Sum_probs=124.9
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee-------eeeeceEEEEEecc---CCeEEEeccC-CC----
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSH---PTTVIYSSKN-GW---- 99 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~l~~~~~~-~~---- 99 (276)
.....|+|.|+|+.|+.+...|.|++++.. ++....+. ........++++|+ +..|.++... ..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 346789999999834445567999999853 43221111 12345688999996 5555555321 00
Q ss_pred CCceEEEEccCC--c--eeee-ecc------cCcceEEEEeccCCCEEEEeeC-------------CCeEEEEeccCce-
Q 023822 100 DESLRLLSLHDN--K--YLRY-FKG------HHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK- 154 (276)
Q Consensus 100 d~~i~~~d~~~~--~--~~~~-~~~------~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~- 154 (276)
...|..+++... + ..+. +.. .......|+|.|+|.++++.+. .|+|.-+|....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 124666665432 1 1111 111 0112357999999976555433 2467777765321
Q ss_pred -----------eeeeE--eecCCCeeEecC-CCcEEEEeeC--CeEEEEecccCCCC-----------------------
Q 023822 155 -----------CQGLL--RVQGRPAAAYDD-QGLVFAVAFG--GYIRMFDARKYEKG----------------------- 195 (276)
Q Consensus 155 -----------~~~~~--~~~~~~~~~~~~-~~~~l~~~~d--~~i~~~d~~~~~~~----------------------- 195 (276)
....+ .......++|+| +++++++-.. +.=.+.-+..+..-
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 11112 112244789999 6777776552 11122222111100
Q ss_pred ----CeeeeeecCCCCCceEEEECC-------CCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCc
Q 023822 196 ----PFDIFSVGGDISDANVVKFSN-------DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 264 (276)
Q Consensus 196 ----~~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 264 (276)
........ +...+..++|.. +|+++++.-..+.|...++..++..............+..+++.|||.
T Consensus 257 ~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 257 VAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 00011111 123456677763 467777666778888888876654433221112235789999999998
Q ss_pred EEEEe
Q 023822 265 FVISG 269 (276)
Q Consensus 265 ~l~~~ 269 (276)
++++.
T Consensus 336 lyv~t 340 (353)
T 2g8s_A 336 LYVLT 340 (353)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76653
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.52 E-value=0.00017 Score=62.89 Aligned_cols=204 Identities=12% Similarity=0.054 Sum_probs=121.3
Q ss_pred EEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC----ceeeeecccCcc
Q 023822 48 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYLRYFKGHHDR 123 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~ 123 (276)
+|+.+. ...|+..++...+....+. ....+..++|.+....|+.+... .+.|+.+++... .....+......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~--~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeecc--ceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 444443 3568888887654433333 33467889999877777776652 678988888753 222333323445
Q ss_pred eEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeEe--ecCCCeeEecCCC-cEEEEee-C-CeEEEEecccCCCCCe
Q 023822 124 VVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQG-LVFAVAF-G-GYIRMFDARKYEKGPF 197 (276)
Q Consensus 124 i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~-~~l~~~~-d-~~i~~~d~~~~~~~~~ 197 (276)
...|++.+.++ ++++-...+.|.+.++........+. ......++++|.+ .++.+-. . +.|.+.++.....
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~--- 549 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--- 549 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce---
Confidence 67889987765 55555567899999988654433332 2335689999875 4444443 3 7788888865332
Q ss_pred eeeeecCCCCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEEC
Q 023822 198 DIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 260 (276)
Q Consensus 198 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s 260 (276)
.............|++++.+..|+.+. ..+.|..+++........+... ..-....+|++.
T Consensus 550 -~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~-~~l~~P~glav~ 611 (791)
T 3m0c_C 550 -YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE-KRLAHPFSLAVF 611 (791)
T ss_dssp -EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT-TTTSSEEEEEEE
T ss_pred -EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCC-CccCCCCEEEEe
Confidence 222223345788999998766666664 4568999997544433333311 112234456653
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.50 E-value=0.00018 Score=55.42 Aligned_cols=206 Identities=10% Similarity=0.058 Sum_probs=124.1
Q ss_pred cCCCcEEEEEEcCCCCEEEEee-cCCeEEEEEccCCeeeee-eee----e--eeceEEEEE---eccCCeEEEeccC---
Q 023822 32 DYNGRISSMDFHKSSSYLVTAS-DDESIRLYDVTAATCLKT-INS----K--KYGVDLVCF---TSHPTTVIYSSKN--- 97 (276)
Q Consensus 32 ~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~~~--- 97 (276)
...---.+++|.+....|..++ ..++|..|+...+..... +.. . ...+..+.| .|+++.+++....
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3333445789988666666665 789999999875543322 221 1 124578999 5786666643310
Q ss_pred -------CCCCceEEEEcc---CCceeeeec--cc-----------CcceEEEEeccCCCEEEEeeCC-CeEEEEeccCc
Q 023822 98 -------GWDESLRLLSLH---DNKYLRYFK--GH-----------HDRVVSLSLCSSKDCFISGSLD-RTVLLWDQRAE 153 (276)
Q Consensus 98 -------~~d~~i~~~d~~---~~~~~~~~~--~~-----------~~~i~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~ 153 (276)
..+..|..||+. +++.+.... .. ......++..++|+..++++.. +.|...+....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 015779999998 777665432 11 1247899999999999988888 88888876654
Q ss_pred eeeeeE-e------ecCCCeeEecCCCcEEEEee-CCeEEEEecccCCCCCeeeeeecC--CCCCceEE-EECCCCcEEE
Q 023822 154 KCQGLL-R------VQGRPAAAYDDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGG--DISDANVV-KFSNDGRLML 222 (276)
Q Consensus 154 ~~~~~~-~------~~~~~~~~~~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~--~~~~i~~~-~~~~~~~~l~ 222 (276)
...... . ......++++|++.+|++.. .+.+..+|++.....++....... .......+ ..-.+|+.|+
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vll 249 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVL 249 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEE
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEE
Confidence 322211 1 12245899999998777766 899999998842211111110011 11122333 3334777744
Q ss_pred E-eecCCcEEEEECCC
Q 023822 223 L-TTMEGHIHVLDSFR 237 (276)
Q Consensus 223 ~-~~~dg~i~i~d~~~ 237 (276)
+ ....+.+.+.+...
T Consensus 250 V~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 250 VGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEETTEEEEEECSST
T ss_pred EEcCCCCEEEEECCCC
Confidence 4 44566666666443
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.49 E-value=0.00016 Score=61.58 Aligned_cols=205 Identities=11% Similarity=0.057 Sum_probs=122.4
Q ss_pred CCcEEEEEEcCCCCEEEEe-ecCCeEEEEEccCCee-eeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC
Q 023822 34 NGRISSMDFHKSSSYLVTA-SDDESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 111 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~ 111 (276)
-.....++|++.+..|+.+ ...+.|..++++.... ...+...-.....+++.+.+..++.+... .+.|.+.++...
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~--~~~I~v~~~dG~ 116 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE--TNRIEVSNLDGS 116 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCC--CCEEEEEECCCC
Confidence 3457789999866666544 4567888888865432 22233222467889999978877777653 789999998765
Q ss_pred ceeeeecccCcceEEEEeccCCCEEEEeeC--CCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--CCeEE
Q 023822 112 KYLRYFKGHHDRVVSLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--GGYIR 185 (276)
Q Consensus 112 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d~~i~ 185 (276)
.....+...-.....|++.|.+..|+.... .+.|...++......... .......+++++++..|..+. .+.|.
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~ 196 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 196 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEE
Confidence 433333233445678999997655555443 467777777644332222 233355799998655444444 68899
Q ss_pred EEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 186 MFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 186 ~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.+|+.......+ ..........+++..+ ..+++-...+.|...|..+++....+.
T Consensus 197 ~~~~dG~~~~~~----~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 197 KSNLDGTNRQAV----VKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp EESSSCCEEC-------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred EecCCCCccEEE----EeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEe
Confidence 999875332111 1111223456777765 444444567889999988877655443
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.45 E-value=7.3e-06 Score=70.72 Aligned_cols=176 Identities=12% Similarity=0.010 Sum_probs=107.6
Q ss_pred CCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC----CceeeeecccCcceEEEEec
Q 023822 55 DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYLRYFKGHHDRVVSLSLC 130 (276)
Q Consensus 55 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~i~~~~~~ 130 (276)
.+.|+..++...+....+.. ...+..++|.+.+..|+.+... .+.|+.+++.. ......+.........|++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~--~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTT--TTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecC--CCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 35788888876655444333 2356789999988888887653 68899999875 22222222122234668887
Q ss_pred cC-CCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--C-CeEEEEecccCCCCCeeeeeecC
Q 023822 131 SS-KDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--G-GYIRMFDARKYEKGPFDIFSVGG 204 (276)
Q Consensus 131 ~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d-~~i~~~d~~~~~~~~~~~~~~~~ 204 (276)
+. ++++++-...+.|.++++........+ .......++++|.+..|..+. . +.|.++++..... ......
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~----~~l~~~ 537 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----YSLVTE 537 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC----CEESCS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe----eEEEeC
Confidence 54 445555556788999998765443333 234466889998654444433 3 6788887764322 111112
Q ss_pred CCCCceEEEECCCCcEEEEe-ecCCcEEEEECCC
Q 023822 205 DISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFR 237 (276)
Q Consensus 205 ~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~ 237 (276)
.....+.|+|+|++..|+.+ +..+.|..+++..
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 23457789999976555554 4567899999864
No 297
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=5.2e-05 Score=61.62 Aligned_cols=151 Identities=13% Similarity=0.185 Sum_probs=98.0
Q ss_pred ceEEEEEec-cCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCC-C----eEEEEecc
Q 023822 78 GVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLD-R----TVLLWDQR 151 (276)
Q Consensus 78 ~v~~~~~~~-~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-~----~i~iwd~~ 151 (276)
....++++| ++..|+++.. .+.|+.+|+..+...... ........++|++++++|+.+... + .+..++..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~---~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE---QHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB---TEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCEEEECCCCCCeEEEEeC---CCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 356889998 5677777765 478999998876544333 344567899999999966655542 2 34444433
Q ss_pred Cceee--eeE-eecCCCeeEecC-CCcEEEEee-CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEe-e
Q 023822 152 AEKCQ--GLL-RVQGRPAAAYDD-QGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT-T 225 (276)
Q Consensus 152 ~~~~~--~~~-~~~~~~~~~~~~-~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~ 225 (276)
+... ..+ .......++++| ++.++++.. ++.|..++....... ...... .......++|+|+|++|+.+ .
T Consensus 214 -g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~~-~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 214 -SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTIQ-DSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp -GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEECS-SSSCCEEEEECTTSSEEEEEET
T ss_pred -CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEcC-CCCcceeEEEcCCCCEEEEEEC
Confidence 2221 222 344567899999 777776665 789999998753310 122222 22457889999999965555 4
Q ss_pred cCCcEEEEECC
Q 023822 226 MEGHIHVLDSF 236 (276)
Q Consensus 226 ~dg~i~i~d~~ 236 (276)
..+.|..++..
T Consensus 290 ~~~~I~~~~~d 300 (430)
T 3tc9_A 290 NQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 56789998754
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.39 E-value=0.00038 Score=54.33 Aligned_cols=223 Identities=10% Similarity=0.029 Sum_probs=121.7
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee----eeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
...+.+|.|.+++..+++ +.+|.|. ...+.++.-.... .....+..+.+.+ + .+++++. .+.|.. ...
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~---~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGE---PPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEE---TTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEEC---CCeEEE-ECC
Confidence 457999999877777774 4667653 3334343222221 1234678888875 3 3444444 554433 223
Q ss_pred CCceeeeec---ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE---eecCCCeeEecCCCcEEEEeeCCe
Q 023822 110 DNKYLRYFK---GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---RVQGRPAAAYDDQGLVFAVAFGGY 183 (276)
Q Consensus 110 ~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~d~~ 183 (276)
.++.-.... .+...+..+.+.+++..++.+ .++.|..- .+.++.-... ....+..+.+.+++.+++++.++.
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~ 184 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGS 184 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSS
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCc
Confidence 333222221 234457778877777666555 45544321 1222222222 122345688889999998887766
Q ss_pred EEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecC-CCCCCceEEEEECCC
Q 023822 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-PVSRNSTLEASFSPE 262 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~~~~s~~ 262 (276)
+..-+-..+.. ..... ......+..+++.++++.++ ++.+|.+++.+...++.-..+... ......+.++.+.++
T Consensus 185 ~~~S~d~gG~t--W~~~~-~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~ 260 (327)
T 2xbg_A 185 FYSTWEPGQTA--WEPHN-RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP 260 (327)
T ss_dssp EEEEECTTCSS--CEEEE-CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS
T ss_pred EEEEeCCCCCc--eeECC-CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC
Confidence 55433111111 11111 23345688899999987654 456788777653334443333311 012345889999998
Q ss_pred CcEEEEec
Q 023822 263 GMFVISGR 270 (276)
Q Consensus 263 g~~l~~~~ 270 (276)
+..++++.
T Consensus 261 ~~~~~~g~ 268 (327)
T 2xbg_A 261 NEVWLAGG 268 (327)
T ss_dssp SCEEEEES
T ss_pred CEEEEEeC
Confidence 88777665
No 299
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=0.00018 Score=58.42 Aligned_cols=196 Identities=7% Similarity=0.065 Sum_probs=109.6
Q ss_pred CCcEEEEEEcCCCCEEEEeecC---C-eEEEEEccCCeee-eeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEc
Q 023822 34 NGRISSMDFHKSSSYLVTASDD---E-SIRLYDVTAATCL-KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 108 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d---~-~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~ 108 (276)
......++++++++++++.... . .+...+...+... ..+. .-.....+++.|+...|.++... ++.|+.+|.
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~--~~~V~~~d~ 257 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH--HAMISSYDP 257 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT--CSEEEEECT
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECC--CCEEEEEEC
Confidence 4557899999999944443311 1 2333333222110 1111 22345678899955555555432 788999998
Q ss_pred cCCceeeee-cc-cCcceEEEEeccCCCEEE-EeeCCCeEEEEeccC--ceee--eeEee-----------------cCC
Q 023822 109 HDNKYLRYF-KG-HHDRVVSLSLCSSKDCFI-SGSLDRTVLLWDQRA--EKCQ--GLLRV-----------------QGR 164 (276)
Q Consensus 109 ~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l~-~~~~d~~i~iwd~~~--~~~~--~~~~~-----------------~~~ 164 (276)
.++.....+ .. ....-..++|+|+++.|+ +-...+.|+.++... +... ..+.. ...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P 337 (433)
T 4hw6_A 258 ATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGP 337 (433)
T ss_dssp TTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSE
T ss_pred CCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCC
Confidence 877652222 11 122234699999999544 445568899988652 2211 11111 112
Q ss_pred CeeEe---------cCCCcEEEEee-CCeEEEEecccCCCCCeeeeeec----------------CCCCCceEEEEC-CC
Q 023822 165 PAAAY---------DDQGLVFAVAF-GGYIRMFDARKYEKGPFDIFSVG----------------GDISDANVVKFS-ND 217 (276)
Q Consensus 165 ~~~~~---------~~~~~~l~~~~-d~~i~~~d~~~~~~~~~~~~~~~----------------~~~~~i~~~~~~-~~ 217 (276)
..+++ .+++.++++-. .+.|+.++... . +....-. ..-.....++++ ++
T Consensus 338 ~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G-~---v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 338 NQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG-R---VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp EEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS-E---EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred ccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC-C---EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence 35788 67777777666 68899998532 1 1111100 011236678888 56
Q ss_pred CcEEEEeecCCcEEEEECC
Q 023822 218 GRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 218 ~~~l~~~~~dg~i~i~d~~ 236 (276)
|.++++=...+.|+.++++
T Consensus 414 g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEecC
Confidence 6655555566778877753
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.36 E-value=0.00059 Score=58.06 Aligned_cols=200 Identities=10% Similarity=0.055 Sum_probs=113.9
Q ss_pred cCCeEEEEEccCCe-eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCce-eeeecccCcceEEEEecc
Q 023822 54 DDESIRLYDVTAAT-CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-LRYFKGHHDRVVSLSLCS 131 (276)
Q Consensus 54 ~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~i~~~~~~~ 131 (276)
....|+..++.... ........-.....++|.+.+..++.+... .+.|..+++..... ...+...-.....+++.+
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp CSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC-----CEEEECSSCSCEEEEEEET
T ss_pred ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECC--CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe
Confidence 34678888887543 122222223457889999988888877653 67888888876532 222332235678899998
Q ss_pred CCC-EEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCC-cEEEEee--CCeEEEEecccCCCCCeeeeeecCC
Q 023822 132 SKD-CFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQG-LVFAVAF--GGYIRMFDARKYEKGPFDIFSVGGD 205 (276)
Q Consensus 132 ~~~-~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~-~~l~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~ 205 (276)
.++ ++++-...+.|.+.++........+ .......++++|.+ .++.+.. .+.|...++..... .......
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~----~~l~~~~ 169 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR----FIIINSE 169 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC----EEEECSS
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce----EEEEeCC
Confidence 555 5555556789999998765433222 34456789999874 4444443 36777777764322 1112223
Q ss_pred CCCceEEEECCCCcEEEEee-cCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCC
Q 023822 206 ISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (276)
Q Consensus 206 ~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (276)
....+.++++++++.|+.+. ..+.|..+|+.......... +.......+++..+
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~---~~~~~P~gi~~~~~ 224 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---GSLPHPFALTLFED 224 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CCCEEESSS
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe---CCCCCceEEEEeCC
Confidence 45678999999766666554 56789999975433322222 11223345666555
No 301
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.36 E-value=0.00011 Score=56.75 Aligned_cols=155 Identities=14% Similarity=0.129 Sum_probs=105.3
Q ss_pred ceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeee-ecc----c--CcceEEEEe---ccCCCEEEEee-------
Q 023822 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRY-FKG----H--HDRVVSLSL---CSSKDCFISGS------- 140 (276)
Q Consensus 78 ~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~-~~~----~--~~~i~~~~~---~~~~~~l~~~~------- 140 (276)
...+++|.+....+..++. +.+.|..|+...+..... +.. . ...+..+.| .|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l--~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNL--YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEET--TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEec--cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 4557899887777777764 289999999876543333 221 1 114578999 68877777543
Q ss_pred ------CCCeEEEEecc---CceeeeeEee---------------cCCCeeEecCCCcEEEEee-C-CeEEEEecccCCC
Q 023822 141 ------LDRTVLLWDQR---AEKCQGLLRV---------------QGRPAAAYDDQGLVFAVAF-G-GYIRMFDARKYEK 194 (276)
Q Consensus 141 ------~d~~i~iwd~~---~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~-d-~~i~~~d~~~~~~ 194 (276)
.+..|..||+. +++....... .....++..++|+..++.+ . +.|..++.....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~- 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT- 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-
Confidence 26789999999 7766554421 1245789999998888666 7 787777766421
Q ss_pred CCeeeeee----cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCC
Q 023822 195 GPFDIFSV----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 195 ~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 237 (276)
...+.. .......+.|+++|+|+.|++....|.+..+|+.+
T Consensus 171 --~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 171 --VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp --EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred --EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 111111 11223477999999998888876799999999874
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.35 E-value=0.00057 Score=54.55 Aligned_cols=210 Identities=15% Similarity=0.241 Sum_probs=133.6
Q ss_pred EEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC-ceeeee
Q 023822 39 SMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYLRYF 117 (276)
Q Consensus 39 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~-~~~~~~ 117 (276)
+.-.+|..+.+|.-. ..++.|+|+++.+.+..+.-.+ +|..-.|-.+ +.|+..+ +..|+-|++... .+.+.+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~-~~l~lVT----~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT----DNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEET-TEEEEEC----SSEEEEEESSSSCCCEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCC-CeEEEEc----CCeeEEecccCCCCchhhe
Confidence 345678878787665 6799999999988887776544 5777777644 4555555 789999999753 456666
Q ss_pred cccC----cceEEEEeccCCCEEEEeeC-------CCeEEEEeccCceeeeeEeecCCCeeEecCCC-----cEEEEee-
Q 023822 118 KGHH----DRVVSLSLCSSKDCFISGSL-------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQG-----LVFAVAF- 180 (276)
Q Consensus 118 ~~~~----~~i~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~- 180 (276)
..|. ..|..-..+++.++++..+- .|.+.+|..+.+... .+..+......+-.+| .+++.+.
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ-~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE-EECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc-hheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 5553 46777778889997764432 367888887765432 2222222222222221 3555554
Q ss_pred ---CCeEEEEecccC--CCCCeeee--e--e--cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCC
Q 023822 181 ---GGYIRMFDARKY--EKGPFDIF--S--V--GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 249 (276)
Q Consensus 181 ---d~~i~~~d~~~~--~~~~~~~~--~--~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 249 (276)
.+.+++.++... ...++... . + .....-..++..++.-..++.-+.-|.|++||+.++.++..-+ -
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr---I 298 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR---I 298 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE---C
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec---c
Confidence 378999998653 11122111 1 1 1122334568888887888888999999999999999988766 2
Q ss_pred CCCceEEEEE
Q 023822 250 SRNSTLEASF 259 (276)
Q Consensus 250 ~~~~v~~~~~ 259 (276)
....|...+-
T Consensus 299 s~~~iF~t~~ 308 (494)
T 1bpo_A 299 SGETIFVTAP 308 (494)
T ss_dssp CSSCEEEEEE
T ss_pred cCCceEEecc
Confidence 3444444333
No 303
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.26 E-value=0.00075 Score=51.83 Aligned_cols=220 Identities=10% Similarity=0.115 Sum_probs=110.2
Q ss_pred CCCEEEEee-cC-----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCC--CCCceEEEEccCCc---e
Q 023822 45 SSSYLVTAS-DD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNK---Y 113 (276)
Q Consensus 45 ~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~~~d~~~~~---~ 113 (276)
++.+++.|+ .+ ..+.+||+.+.+-...-..............++..++.++..+ ....+.+||+.+.+ -
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445666666 33 3688899877653322111111111122223566677776521 12468899988765 2
Q ss_pred ee--eecccCcceEEEEeccCCCEEEEeeCC-----CeEEEEeccCceeeeeEe--ecCCCeeEecCCCcEEEEee-C--
Q 023822 114 LR--YFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLR--VQGRPAAAYDDQGLVFAVAF-G-- 181 (276)
Q Consensus 114 ~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-d-- 181 (276)
.. .+.........+. .++++++.|+.+ ..+.+||+.+.+-...-. .......+..-++++++.+. +
T Consensus 94 ~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred EECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCC
Confidence 22 2221111112222 266777777654 368899988765443221 11111222223566666654 2
Q ss_pred ---CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEEEEeecCCCCCCc
Q 023822 182 ---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNS 253 (276)
Q Consensus 182 ---~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (276)
..+.+||+.+.+= ..+..+.........+. -++++++.|+.+ ..+.+||+.+.+-...-... .....
T Consensus 172 ~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~ 246 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHW--TNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT-TPRCY 246 (301)
T ss_dssp CBCCCEEEEETTTTEE--EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS-SCCBS
T ss_pred cccceEEEEeCCCCcE--EeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC-Ccccc
Confidence 5688899876431 11111111111122222 256777777764 46899999887654432211 11122
Q ss_pred eEEEEECCCCcEEEEecCCC
Q 023822 254 TLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 254 v~~~~~s~~g~~l~~~~~dg 273 (276)
...+. -++++++.|+.++
T Consensus 247 ~~~~~--~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 247 VGATV--LRGRLYAIAGYDG 264 (301)
T ss_dssp CEEEE--ETTEEEEECCBCS
T ss_pred eeEEE--ECCEEEEEcCcCC
Confidence 22222 2677888887664
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.23 E-value=0.00095 Score=51.98 Aligned_cols=175 Identities=10% Similarity=0.155 Sum_probs=105.0
Q ss_pred cCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccC----CC---EEEEeeC---CCeEEEEecc--Cce
Q 023822 87 HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSS----KD---CFISGSL---DRTVLLWDQR--AEK 154 (276)
Q Consensus 87 ~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---d~~i~iwd~~--~~~ 154 (276)
....++.... .+-+.+||+ +++.++.+.. +.++.+..-|+ ++ ++++..+ +++|.+|++. +.+
T Consensus 39 ~~s~ii~t~k---~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNK---KSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEET---TTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcC---CCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc
Confidence 3445555555 788999999 8888888753 45666666552 22 2333333 5789999773 332
Q ss_pred eeeeE-e--------ecCCCeeEe--cCC-Cc-EEE-EeeCCeEEEEecccCCCC---CeeeeeecCCCCCceEEEECCC
Q 023822 155 CQGLL-R--------VQGRPAAAY--DDQ-GL-VFA-VAFGGYIRMFDARKYEKG---PFDIFSVGGDISDANVVKFSND 217 (276)
Q Consensus 155 ~~~~~-~--------~~~~~~~~~--~~~-~~-~l~-~~~d~~i~~~d~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~ 217 (276)
+..+ . ...+..+++ +|. +. ++. ...++.+..|++...... ...+..+. ....+-.++..+.
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvDd~ 190 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAADDE 190 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEETT
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEcCC
Confidence 3333 1 133455666 664 43 333 334899999998542211 11122222 2346788899998
Q ss_pred CcEEEEeecCCcEEEEECC-----CCcEEEEeecCCCCCCceEEEEE--CCCCc-EEEEec
Q 023822 218 GRLMLLTTMEGHIHVLDSF-----RGTLLSTYNVKPVSRNSTLEASF--SPEGM-FVISGR 270 (276)
Q Consensus 218 ~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~~~~~~~v~~~~~--s~~g~-~l~~~~ 270 (276)
...|+.+-++.-|..++.. +++.+..+... .....+..+++ .++++ ||++++
T Consensus 191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g-~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGR-HLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSS-SBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred CCeEEEecccceEEEEeCCcCCCCCceEEEEecCC-ccccCcceEEEEecCCCCEEEEEEc
Confidence 8889999998777777754 34555554321 23346888888 55665 666655
No 305
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.23 E-value=0.00038 Score=59.80 Aligned_cols=112 Identities=11% Similarity=0.047 Sum_probs=71.3
Q ss_pred EEEEec-cCCeEEEeccCCC--------CCceEEEEccCCcee--eeec-ccCcceEEEEeccCCCEEEEeeC-CCeEEE
Q 023822 81 LVCFTS-HPTTVIYSSKNGW--------DESLRLLSLHDNKYL--RYFK-GHHDRVVSLSLCSSKDCFISGSL-DRTVLL 147 (276)
Q Consensus 81 ~~~~~~-~~~~l~~~~~~~~--------d~~i~~~d~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~l~~~~~-d~~i~i 147 (276)
.+++.+ +++.++.++.... ...+.+||+.+++.. ..+. .+.....++++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 7777787765210 115889998877532 2222 12333445677889999999885 458999
Q ss_pred EeccCceeeeeE--eecC-CCeeEecCCCcEEEEee--C-----CeEEEEecccC
Q 023822 148 WDQRAEKCQGLL--RVQG-RPAAAYDDQGLVFAVAF--G-----GYIRMFDARKY 192 (276)
Q Consensus 148 wd~~~~~~~~~~--~~~~-~~~~~~~~~~~~l~~~~--d-----~~i~~~d~~~~ 192 (276)
||..+.+-...- .... ...++..+++++++.+. + ..+.+||..+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 999877544322 1111 22456667888877776 3 57899998653
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.22 E-value=0.00034 Score=54.99 Aligned_cols=162 Identities=14% Similarity=0.175 Sum_probs=95.9
Q ss_pred CCceEEEEccCC--ceee-eecc-----cCcceEEEEecc--CCC-EEEEe-eC--CCeEEEEeccCcee----eeeEe-
Q 023822 100 DESLRLLSLHDN--KYLR-YFKG-----HHDRVVSLSLCS--SKD-CFISG-SL--DRTVLLWDQRAEKC----QGLLR- 160 (276)
Q Consensus 100 d~~i~~~d~~~~--~~~~-~~~~-----~~~~i~~~~~~~--~~~-~l~~~-~~--d~~i~iwd~~~~~~----~~~~~- 160 (276)
+|.|.++|+.+. +... .+.+ .......+.+.+ ++. +|+.+ .. +.+|.+|++..... +..+.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc
Confidence 899999998743 2211 1222 223566777765 454 34444 33 46788887765321 12222
Q ss_pred --ecCCCeeEecCCCcEEEEee----C--------------CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcE
Q 023822 161 --VQGRPAAAYDDQGLVFAVAF----G--------------GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL 220 (276)
Q Consensus 161 --~~~~~~~~~~~~~~~l~~~~----d--------------~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 220 (276)
....+.+.+.++|.++++.. | +.|+.+|.. + .......-...+.++|+||++.
T Consensus 162 ~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-----~~~~~~~l~~pNGia~spDg~~ 234 (355)
T 3sre_A 162 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-----VRVVAEGFDFANGINISPDGKY 234 (355)
T ss_dssp TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-----CEEEEEEESSEEEEEECTTSSE
T ss_pred CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-----EEEeecCCcccCcceECCCCCE
Confidence 12245788889998877754 1 445555542 1 1111122345788999999988
Q ss_pred EEEee-cCCcEEEEECCC-CcEE--EEeecCCCCCCceEEEEECC-CCcEEEEecCC
Q 023822 221 MLLTT-MEGHIHVLDSFR-GTLL--STYNVKPVSRNSTLEASFSP-EGMFVISGRVS 272 (276)
Q Consensus 221 l~~~~-~dg~i~i~d~~~-~~~~--~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d 272 (276)
|+.+. ..+.|..|++.. ++.. ..+. ..+..-.+++.+ +|++.+++..+
T Consensus 235 lYvadt~~~~I~~~~~~~~g~l~~~~~~~----~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHANWTLTPLRVLS----FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEE----CSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEEeCCCCeEEEEEECCCCcEecCEEEe----CCCCCceEEEeCCCCcEEEEecCC
Confidence 77765 568899999863 4332 2332 346778899999 59887766544
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.20 E-value=0.001 Score=51.16 Aligned_cols=218 Identities=9% Similarity=0.059 Sum_probs=108.1
Q ss_pred CEEEEeec--CCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC-CCCCceEEEEccCCceeee--ecccC
Q 023822 47 SYLVTASD--DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-GWDESLRLLSLHDNKYLRY--FKGHH 121 (276)
Q Consensus 47 ~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~d~~i~~~d~~~~~~~~~--~~~~~ 121 (276)
.+++.|+. ...+.+||..+.+-...-..........+...++..++.++.. ..-..+.+||+.+++-... +....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r 92 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR 92 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc
Confidence 34555554 3578899988765332211111111111222366666776641 1136788899887653222 22111
Q ss_pred cceEEEEeccCCCEEEEeeCC------CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee----------CCe
Q 023822 122 DRVVSLSLCSSKDCFISGSLD------RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF----------GGY 183 (276)
Q Consensus 122 ~~i~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~----------d~~ 183 (276)
.....+. -++++++.|+.+ ..+.+||..+.+-...- ........+..-++++++.+. -..
T Consensus 93 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 170 (306)
T 3ii7_A 93 DSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNS 170 (306)
T ss_dssp BSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCC
T ss_pred cceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccce
Confidence 1112222 267777887765 46889998877543322 111111122223556666554 234
Q ss_pred EEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEEEEeecCCCCCCceEEEE
Q 023822 184 IRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 258 (276)
Q Consensus 184 i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~ 258 (276)
+.+||+.+.+= .....+......-..+.+ ++++++.|+.+ ..+.+||..+.+-...-.. +........+.
T Consensus 171 ~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~ 245 (306)
T 3ii7_A 171 CEVYDPATETW--TELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKGVTVKCAA 245 (306)
T ss_dssp EEEEETTTTEE--EEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCBSCCEEEE
T ss_pred EEEeCCCCCeE--EECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCccceeEEE
Confidence 88888876431 111111111111122222 66777777654 3588999887754433221 11222222333
Q ss_pred ECCCCcEEEEecCCC
Q 023822 259 FSPEGMFVISGRVSP 273 (276)
Q Consensus 259 ~s~~g~~l~~~~~dg 273 (276)
+ ++++++.|+.++
T Consensus 246 ~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 246 V--GSIVYVLAGFQG 258 (306)
T ss_dssp E--TTEEEEEECBCS
T ss_pred E--CCEEEEEeCcCC
Confidence 3 678888888664
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.16 E-value=0.00051 Score=54.69 Aligned_cols=143 Identities=11% Similarity=0.095 Sum_probs=93.2
Q ss_pred ccCCCEEEEeeCCCeEEEEeccCceeeeeEeec------CCCeeEecCCCcEEEEeeCCeEEEEecccCCCCC-------
Q 023822 130 CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ------GRPAAAYDDQGLVFAVAFGGYIRMFDARKYEKGP------- 196 (276)
Q Consensus 130 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~------- 196 (276)
+.++..++.+- ++.||.-++......+.++.. .+..+..+|+|.+||..++..|.|..+..+....
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 34555555543 467887777744444444332 5678999999999999999999999987432111
Q ss_pred -ee--eeeecC----CCCCceEEEECCC---CcEEEEeecCCcEEEEECCCCcE-EEEeec------CCCCCCceEEEEE
Q 023822 197 -FD--IFSVGG----DISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGTL-LSTYNV------KPVSRNSTLEASF 259 (276)
Q Consensus 197 -~~--~~~~~~----~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~------~~~~~~~v~~~~~ 259 (276)
.. .+.+.. ...+|..+.|+|- +..|++-..|+.|++||+..... ...+.. .......|.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 11 222221 2467999999995 46799999999999999975221 112221 0122367889999
Q ss_pred CCCCcEEEE--ecCCC
Q 023822 260 SPEGMFVIS--GRVSP 273 (276)
Q Consensus 260 s~~g~~l~~--~~~dg 273 (276)
.+++-.|.. .+..|
T Consensus 188 g~~~lTLYvl~~t~~G 203 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGG 203 (452)
T ss_dssp CTTSSCEEEEECTTSC
T ss_pred cCCCcEEEEEecCCCC
Confidence 998866655 33555
No 309
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.16 E-value=0.0025 Score=54.29 Aligned_cols=202 Identities=11% Similarity=0.071 Sum_probs=121.9
Q ss_pred CcEEEEEEcCCCCEEEEe-ecCCeEEEEEccCCeeeeeeee------eeeceEEEEEeccCCeEEEeccCCCCCceEEEE
Q 023822 35 GRISSMDFHKSSSYLVTA-SDDESIRLYDVTAATCLKTINS------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 107 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d 107 (276)
..+..++|.+.++.|+-+ ...+.|+.++.........+.. ....+..+++...++.|..+... .+.|.+.+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~--~~~I~v~~ 417 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEA--TNVINVTR 417 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETT--TTEEEEEE
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCC--CCEEEEEE
Confidence 457889999866655544 4567888888764332222322 22357899999888887766542 78899999
Q ss_pred ccCCceeeee-cccCcceEEEEecc-CCCEEEEeeCCC--eEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-
Q 023822 108 LHDNKYLRYF-KGHHDRVVSLSLCS-SKDCFISGSLDR--TVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF- 180 (276)
Q Consensus 108 ~~~~~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~d~--~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~- 180 (276)
+. ++....+ .........+++.| .+.++.+-.... .|...++......... .......+++++++..|..+.
T Consensus 418 ~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~ 496 (628)
T 4a0p_A 418 LD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADS 496 (628)
T ss_dssp TT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeC
Confidence 86 4443333 33345679999999 555555533333 5666666544332222 233456799998765554444
Q ss_pred -CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEe
Q 023822 181 -GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 244 (276)
Q Consensus 181 -d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 244 (276)
.+.|..+++..... . .+ ..........++... +.++.+-.....|...|..+|+....+
T Consensus 497 ~~~~I~~~~~dG~~r--~-~~-~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i 556 (628)
T 4a0p_A 497 DLRRIESSDLSGANR--I-VL-EDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKV 556 (628)
T ss_dssp TTTEEEEEETTSCSC--E-EE-ECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEE
T ss_pred CCCEEEEEeCCCCce--E-EE-EcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEE
Confidence 58999999865332 1 11 112233456777755 454454455677888887766644433
No 310
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.12 E-value=0.0018 Score=50.73 Aligned_cols=240 Identities=10% Similarity=0.041 Sum_probs=130.3
Q ss_pred eeeccCCCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeee--eee----eeeeeceEEEEEecc---CCeEEEeccCC
Q 023822 28 MSFRDYNGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL--KTI----NSKKYGVDLVCFTSH---PTTVIYSSKNG 98 (276)
Q Consensus 28 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~l~~~~~~~ 98 (276)
..+...-.....|+|.|+|.++++--..|.|++++..+++.. ..+ .........++++|+ +..|.+.....
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 334444556789999999997777655899999986655432 111 122456789999985 45554432111
Q ss_pred CCCceEEEEccCCc--------e--e-eeecc-cCcceEEEEeccCCCEEEEeeC-------------CCeEEEEeccCc
Q 023822 99 WDESLRLLSLHDNK--------Y--L-RYFKG-HHDRVVSLSLCSSKDCFISGSL-------------DRTVLLWDQRAE 153 (276)
Q Consensus 99 ~d~~i~~~d~~~~~--------~--~-~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~ 153 (276)
.++.|.-|....+. . + ..+.. ....-..|.|.|||.++++.+. .|.|.-.+....
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 15566666655421 1 1 11211 1112457999999987776542 355655565432
Q ss_pred ---------eeeeeEeecCCCeeEecCCCcEEEEee--CCeEEEEecccCCCC--C------------eeeeeecCCCCC
Q 023822 154 ---------KCQGLLRVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEKG--P------------FDIFSVGGDISD 208 (276)
Q Consensus 154 ---------~~~~~~~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~~--~------------~~~~~~~~~~~~ 208 (276)
..+...-......++|+|++.++++-. ++.=.+--++.+..- + ........+...
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 011111222345799999988877665 332222222222110 0 001112222234
Q ss_pred ceEEEECCCCcEEEEeecCCcEEEEECCCCcEE---EEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL---STYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 209 i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
...++|. +|..+...-..+.|....+...... ..+. .+..+.+.+++..|||.++++.+
T Consensus 265 p~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l--~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 265 PSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFL--EGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEES--TTTSSCEEEEEEEETTEEEEEEC
T ss_pred CcceEEE-cCceeeccccCCEEEEEEecCCceecceEEee--cCCCCCccEEEECCCCcEEEEEc
Confidence 5567776 3555555545566766666554321 1121 13457899999999998766543
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.11 E-value=0.0015 Score=50.11 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=97.1
Q ss_pred CCCEEEEeecC-----CeEEEEEccCCe---e--eeeeeeeeeceEEEEEeccCCeEEEeccCCC--CCceEEEEccCCc
Q 023822 45 SSSYLVTASDD-----ESIRLYDVTAAT---C--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGW--DESLRLLSLHDNK 112 (276)
Q Consensus 45 ~~~~l~~~~~d-----~~i~iwd~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--d~~i~~~d~~~~~ 112 (276)
++.+++.|+.+ ..+.+||..+.+ - +..+......-..+. .+++.++.++..+. ...+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56677777754 468899987655 2 222222111112222 26666677664221 2468889987765
Q ss_pred eee--eecccCcceEEEEeccCCCEEEEeeCC-----CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-C-
Q 023822 113 YLR--YFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-G- 181 (276)
Q Consensus 113 ~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d- 181 (276)
-.. .+.........+. .++++++.|+.+ ..+.+||+.+.+-...- ........+..-++++++.+. +
T Consensus 140 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC
Confidence 322 2221111112222 267777777764 45889998877544322 111111122223556666654 2
Q ss_pred ----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcE
Q 023822 182 ----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTL 240 (276)
Q Consensus 182 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~ 240 (276)
..+.+||+.+.+= ..+............+.+ ++++++.|+.+ ..+.+||..+.+-
T Consensus 218 ~~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSW--TTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp SSBCCCEEEEETTTTEE--EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CcccceEEEEeCCCCcE--EECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 4689999876431 111111111112222222 67777887765 3578899877654
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.10 E-value=0.00055 Score=54.51 Aligned_cols=145 Identities=14% Similarity=0.187 Sum_probs=95.2
Q ss_pred EeccCCeEEEeccCCCCCceEEEEccCCceeeeeccc----CcceEEEEeccCCCEEEEeeCCCeEEEEeccCce-----
Q 023822 84 FTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH----HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK----- 154 (276)
Q Consensus 84 ~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~----- 154 (276)
.+.++..++++. ++.||.-++......+.+... -..|..+..+|+|++||..+ +..|.+-.+..+.
T Consensus 28 ~~~n~t~i~~a~----~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 28 SSQNGTRIVFIQ----DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EETTTTEEEEEE----TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCC
T ss_pred EEcCCCEEEEEE----CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcc
Confidence 345677777766 788888887754444444432 22578899999999998886 4578888877321
Q ss_pred -------eeeeEe--------ecCCCeeEecCCC----cEEEEeeCCeEEEEecccCCCCCee------eeeecCCCCCc
Q 023822 155 -------CQGLLR--------VQGRPAAAYDDQG----LVFAVAFGGYIRMFDARKYEKGPFD------IFSVGGDISDA 209 (276)
Q Consensus 155 -------~~~~~~--------~~~~~~~~~~~~~----~~l~~~~d~~i~~~d~~~~~~~~~~------~~~~~~~~~~i 209 (276)
..+.++ ..++..+.|+|-+ .+++...|+.|++||+......|.. .+........+
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 011222 2346689999954 6777777999999999874443431 12222333578
Q ss_pred eEEEECCCCcEEEEee--cCCcEEEE
Q 023822 210 NVVKFSNDGRLMLLTT--MEGHIHVL 233 (276)
Q Consensus 210 ~~~~~~~~~~~l~~~~--~dg~i~i~ 233 (276)
.+++|.+++-.|+..+ ..|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8999999886666644 77777643
No 313
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.0013 Score=54.02 Aligned_cols=154 Identities=13% Similarity=0.191 Sum_probs=96.2
Q ss_pred eEEEEEec-cCCeEEEeccCCCCCceEEEEccCCceeeeeccc---CcceEEEEe-------ccCCCEEEEeeCCC----
Q 023822 79 VDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH---HDRVVSLSL-------CSSKDCFISGSLDR---- 143 (276)
Q Consensus 79 v~~~~~~~-~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~---~~~i~~~~~-------~~~~~~l~~~~~d~---- 143 (276)
...|+|.| +...|+++... .+.|++.|+.++......... ......++| ++++++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~--~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDG--HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEET--EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECC--CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 46889998 46666666542 467888998877655443321 235789999 99999666665543
Q ss_pred ---eEEEEeccC-ceee-----eeE-eecCCCeeEecCC-CcEEEEee-CCeEEEEecc-------cCCC-CC-------
Q 023822 144 ---TVLLWDQRA-EKCQ-----GLL-RVQGRPAAAYDDQ-GLVFAVAF-GGYIRMFDAR-------KYEK-GP------- 196 (276)
Q Consensus 144 ---~i~iwd~~~-~~~~-----~~~-~~~~~~~~~~~~~-~~~l~~~~-d~~i~~~d~~-------~~~~-~~------- 196 (276)
.|.+.+... +... ..+ .......++++|+ +.++++.. ++.|..+|+. ++.. .+
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665333 1221 122 3345568899995 55555555 7889999997 4332 00
Q ss_pred -e-eeeeecCCCCCceEEEECCCCcEEEEe-ecCCcEEEEEC
Q 023822 197 -F-DIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDS 235 (276)
Q Consensus 197 -~-~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~ 235 (276)
. .+... ........++|+|+|++|+.+ +....|+.++.
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 1 12222 223456889999999965555 45678888654
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.09 E-value=0.0012 Score=50.83 Aligned_cols=190 Identities=8% Similarity=0.081 Sum_probs=98.3
Q ss_pred CCCEEEEeecC----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccC---CCCCceEEEEccCCceeee-
Q 023822 45 SSSYLVTASDD----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYLRY- 116 (276)
Q Consensus 45 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~d~~i~~~d~~~~~~~~~- 116 (276)
++.+++.|+.+ ..+.+||..+.+-...-..........+...+++.++.++.. .....+.+||+.+.+-...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 56677777754 578899988765432211111111111222366666777652 1125688999887653221
Q ss_pred -ecccCcceEEEEeccCCCEEEEeeC---------CCeEEEEeccCceeeeeE--eecCCC-eeEecCCCcEEEEee-C-
Q 023822 117 -FKGHHDRVVSLSLCSSKDCFISGSL---------DRTVLLWDQRAEKCQGLL--RVQGRP-AAAYDDQGLVFAVAF-G- 181 (276)
Q Consensus 117 -~~~~~~~i~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~--~~~~~~-~~~~~~~~~~l~~~~-d- 181 (276)
+.........+. -++++++.|+. -..+.+||+.+.+-...- ...... .+... ++++++.+. +
T Consensus 135 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 211 (306)
T 3ii7_A 135 SMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNG 211 (306)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEET
T ss_pred CCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCC
Confidence 111111111222 26677777764 345889999877543322 111111 22222 556666554 2
Q ss_pred ----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEE
Q 023822 182 ----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLL 241 (276)
Q Consensus 182 ----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~ 241 (276)
..+.+||+.+.+= ..+..+.........+.+ ++++++.|+.+ ..+.+||..+.+-.
T Consensus 212 ~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 276 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLNEW--KMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWV 276 (306)
T ss_dssp TEEBCCEEEEETTTTEE--EECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEE
T ss_pred CCCCceEEEeeCCCCcE--EECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEE
Confidence 5688999876431 111111111122233333 67788888754 46899998876543
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.08 E-value=0.0014 Score=50.48 Aligned_cols=219 Identities=11% Similarity=0.045 Sum_probs=108.2
Q ss_pred CCCEEEEeecC----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEecc----CC--CCCceEEEEccCCcee
Q 023822 45 SSSYLVTASDD----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK----NG--WDESLRLLSLHDNKYL 114 (276)
Q Consensus 45 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~--~d~~i~~~d~~~~~~~ 114 (276)
++.+++.|+.+ ..+.+||..+.+-...-..............++..++.++. .+ ....+.+||+.+.+-.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 45677777632 36889998876543221111111111111225666666653 10 1246888998776432
Q ss_pred e--eecccCcceEEEEeccCCCEEEEeeCC-----CeEEEEeccCceeeeeE--eecCCC-eeEecCCCcEEEEee-C--
Q 023822 115 R--YFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLL--RVQGRP-AAAYDDQGLVFAVAF-G-- 181 (276)
Q Consensus 115 ~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~--~~~~~~-~~~~~~~~~~l~~~~-d-- 181 (276)
. .+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...- ...... .++.. ++++++.+. +
T Consensus 104 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGT 180 (308)
T ss_dssp ECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSS
T ss_pred ECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCC
Confidence 2 12111112222222 66777777643 35888998876543322 111111 22222 566666554 2
Q ss_pred ---CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEEEEeecCCCCCCc
Q 023822 182 ---GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNS 253 (276)
Q Consensus 182 ---~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~ 253 (276)
..+.+||+.+.+= .....+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...-.. +.....
T Consensus 181 ~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~ 255 (308)
T 1zgk_A 181 NRLNSAECYYPERNEW--RMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM-KHRRSA 255 (308)
T ss_dssp CBCCCEEEEETTTTEE--EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC-SSCCBS
T ss_pred CcCceEEEEeCCCCeE--eeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC-CCCccc
Confidence 4688899876431 001111111112222333 67777877764 4699999887765432221 111112
Q ss_pred eEEEEECCCCcEEEEecCCC
Q 023822 254 TLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 254 v~~~~~s~~g~~l~~~~~dg 273 (276)
...+. -++++++.|+.++
T Consensus 256 ~~~~~--~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 256 LGITV--HQGRIYVLGGYDG 273 (308)
T ss_dssp CEEEE--ETTEEEEECCBCS
T ss_pred eEEEE--ECCEEEEEcCcCC
Confidence 22222 2678888887664
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.05 E-value=0.0022 Score=49.28 Aligned_cols=218 Identities=11% Similarity=0.125 Sum_probs=106.4
Q ss_pred CCEEEEeecC----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCC--CCCceEEEEccCCceee--ee
Q 023822 46 SSYLVTASDD----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNKYLR--YF 117 (276)
Q Consensus 46 ~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~~~d~~~~~~~~--~~ 117 (276)
+.+++.|+.+ ..+..||+.+.+-...-..............++..++.++..+ .-..+.+||..+.+-.. .+
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 95 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM 95 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCC
Confidence 3455566543 3578889877653322111111111111222666677776421 12468889987765322 12
Q ss_pred cccCcceEEEEeccCCCEEEEeeCCC-----eEEEEeccCceeeeeE--eecCCC-eeEecCCCcEEEEee-C-------
Q 023822 118 KGHHDRVVSLSLCSSKDCFISGSLDR-----TVLLWDQRAEKCQGLL--RVQGRP-AAAYDDQGLVFAVAF-G------- 181 (276)
Q Consensus 118 ~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~--~~~~~~-~~~~~~~~~~l~~~~-d------- 181 (276)
.........+. -++.+++.|+.++ .+.+||+.+.+-...- ...... .++. -++++++.+. +
T Consensus 96 p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 96 RDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp SSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEEC
T ss_pred CccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccc
Confidence 11111112222 2667777777653 5788898876543322 111111 2222 3556666554 2
Q ss_pred CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEEEEeecCCCCCCceEE
Q 023822 182 GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLE 256 (276)
Q Consensus 182 ~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 256 (276)
..+.+||+.+.+= .....+.........+.+ ++++++.|+.+ ..+.+||..+.+-...-... ........
T Consensus 173 ~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~ 247 (302)
T 2xn4_A 173 STVECYNATTNEW--TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN-MCRRNAGV 247 (302)
T ss_dssp CCEEEEETTTTEE--EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEE
T ss_pred cEEEEEeCCCCcE--EECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-CccccCeE
Confidence 3588898876431 111111111111222222 67777888764 36899999877654332211 11111112
Q ss_pred EEECCCCcEEEEecCCC
Q 023822 257 ASFSPEGMFVISGRVSP 273 (276)
Q Consensus 257 ~~~s~~g~~l~~~~~dg 273 (276)
+. .++++++.|+.++
T Consensus 248 ~~--~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 248 CA--VNGLLYVVGGDDG 262 (302)
T ss_dssp EE--ETTEEEEECCBCS
T ss_pred EE--ECCEEEEECCcCC
Confidence 22 3678888888664
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.01 E-value=0.0021 Score=49.38 Aligned_cols=191 Identities=12% Similarity=0.126 Sum_probs=95.7
Q ss_pred CCCEEEEeecC-----CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCC--CCceEEEEccCCceeee-
Q 023822 45 SSSYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW--DESLRLLSLHDNKYLRY- 116 (276)
Q Consensus 45 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--d~~i~~~d~~~~~~~~~- 116 (276)
++.+++.|+.+ ..+.+||..+.+-...-..........+...+++.++.++..+. -..+.+||+.+.+-...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 56677777754 35888998776533221111111111112226667777765211 13577888877643221
Q ss_pred -ecccCcceEEEEeccCCCEEEEeeCC-------CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee-C----
Q 023822 117 -FKGHHDRVVSLSLCSSKDCFISGSLD-------RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF-G---- 181 (276)
Q Consensus 117 -~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~-d---- 181 (276)
+....... +++. -++++++.|+.+ ..+.+||+.+.+-...- ........+..-++++++.+. +
T Consensus 141 ~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 141 PMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLV 218 (302)
T ss_dssp CCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSB
T ss_pred CCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcc
Confidence 21111111 2222 266777777643 35889998876543322 111111122222556666654 2
Q ss_pred -CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC-----cEEEEECCCCcEE
Q 023822 182 -GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRGTLL 241 (276)
Q Consensus 182 -~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~ 241 (276)
..+.+||+.+.+= ..+............+. -++++++.|+.++ .+.+||..+.+-.
T Consensus 219 ~~~~~~yd~~~~~W--~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 219 RKSVEVYDPTTNAW--RQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp CCCEEEEETTTTEE--EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred cceEEEEeCCCCCE--eeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 4688999876431 11111111111112222 3677788887653 4899998877644
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.84 E-value=0.0012 Score=47.75 Aligned_cols=173 Identities=10% Similarity=0.062 Sum_probs=94.7
Q ss_pred CCCEEEEeecCCeEEEEEccCCee------eeeeee-eeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeee
Q 023822 45 SSSYLVTASDDESIRLYDVTAATC------LKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 117 (276)
Q Consensus 45 ~~~~l~~~~~d~~i~iwd~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~ 117 (276)
....|+...+| +++.=....+.. ...+-. .-..+..++|+|++...++ . +|.+.-.+..+.... .+
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~---~G~Ly~~~~~t~~~~-~W 75 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--L---NDKIYKGTPPTHDND-NW 75 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--E---TTEEEEESCCCSTTC-CH
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--e---CCeEEEECCCCCCcc-cc
Confidence 34556666666 555544333321 111111 0136779999998886666 4 787777666442221 11
Q ss_pred cccCcc--------eEEEEeccCCCEEEEeeCCCeEEEEeccCceeeee------Eee---cCCCeeEecCCCcEEEEee
Q 023822 118 KGHHDR--------VVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL------LRV---QGRPAAAYDDQGLVFAVAF 180 (276)
Q Consensus 118 ~~~~~~--------i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~------~~~---~~~~~~~~~~~~~~l~~~~ 180 (276)
.+.... ..++.|.|++.+.++ .||.|+-++-.+.....- +.. ..+..+.+.|+|.+.++.
T Consensus 76 ~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~- 152 (236)
T 1tl2_A 76 MGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH- 152 (236)
T ss_dssp HHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-
T ss_pred cccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-
Confidence 111222 478899999987777 569998887543221111 111 345689999999999999
Q ss_pred CCeEEEEecccCCCCCe--eeeeec-CCCCCceEEEECCCCcEEEEeecCCc
Q 023822 181 GGYIRMFDARKYEKGPF--DIFSVG-GDISDANVVKFSNDGRLMLLTTMEGH 229 (276)
Q Consensus 181 d~~i~~~d~~~~~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~ 229 (276)
|+.++-....+...... ....+. ..-.....+.|.|+|.+.++. +|.
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 88855433221111000 000111 122234446788888766555 663
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.77 E-value=0.00077 Score=48.66 Aligned_cols=142 Identities=12% Similarity=0.021 Sum_probs=82.4
Q ss_pred cceEEEEeccCCCEEEEeeCCCeEEEEeccCceee------eeE---eecCCCeeEecCCCcEEEEeeCCeEEEEecccC
Q 023822 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ------GLL---RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKY 192 (276)
Q Consensus 122 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~------~~~---~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~ 192 (276)
..+..++|+|++.+.++ .+|.++-.+..+.... ..+ --..-..+.|.|++.+.++ .||.|+-++..+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcC
Confidence 36779999999986666 6787777665442211 111 1112368999999999999 7899988876443
Q ss_pred CCCCee-e-eee-cCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEE-----EEeecCCCCCCceEEEEECCCCc
Q 023822 193 EKGPFD-I-FSV-GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL-----STYNVKPVSRNSTLEASFSPEGM 264 (276)
Q Consensus 193 ~~~~~~-~-~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~v~~~~~s~~g~ 264 (276)
...... . ..+ ...-..+..|.|.|+|.+.++. |+.++-....++... ...-.. ..-....-+.|.++|.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~-~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQ-GGWDTFKFLFFSSVGT 194 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEES-SSGGGEEEEEECTTSC
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceecc-CCcceEEEEEECCCCc
Confidence 221110 0 011 1122467899999999866666 777544433322100 111100 1222344567889888
Q ss_pred EEEEe
Q 023822 265 FVISG 269 (276)
Q Consensus 265 ~l~~~ 269 (276)
+.++.
T Consensus 195 l~~v~ 199 (236)
T 1tl2_A 195 LFGVQ 199 (236)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77665
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.75 E-value=0.008 Score=46.25 Aligned_cols=189 Identities=8% Similarity=0.090 Sum_probs=96.4
Q ss_pred CCCEEEEeec----C-----CeEEEEEccCCeeeee--eeeeeeceEEEEEeccCCeEEEeccCC--CCCceEEEEccCC
Q 023822 45 SSSYLVTASD----D-----ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDN 111 (276)
Q Consensus 45 ~~~~l~~~~~----d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~~~d~~~~ 111 (276)
++.+++.|+. + ..+.+||..+.+-... +......-..+. -+++.++.++..+ ....+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777765 2 3688899877653322 211111112222 2666667666421 0246888998776
Q ss_pred ceee--eecccCcceEEEEeccCCCEEEEeeCC-----CeEEEEeccCceeeeeE--eecCC-CeeEecCCCcEEEEee-
Q 023822 112 KYLR--YFKGHHDRVVSLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLL--RVQGR-PAAAYDDQGLVFAVAF- 180 (276)
Q Consensus 112 ~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~- 180 (276)
+-.. .+.........+.+ ++++++.|+.+ ..+.+||+.+.+-...- ..... ..++.. ++++++.+.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 224 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGY 224 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCC
Confidence 4322 12111111122222 66777777764 45889998876543322 11111 122222 566666654
Q ss_pred C-----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEEE
Q 023822 181 G-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLS 242 (276)
Q Consensus 181 d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~ 242 (276)
+ ..+.+||+.+.+= ..+..+.........+. -++++++.|+.+ ..+.+||..+.+-..
T Consensus 225 ~~~~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETETW--TFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp CSSSBCCCEEEEETTTTEE--EECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred CCCCccceEEEEeCCCCcE--EECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 3 5689999876431 11111111111122222 267777887754 358889987765543
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.73 E-value=0.0088 Score=46.18 Aligned_cols=214 Identities=14% Similarity=0.157 Sum_probs=105.1
Q ss_pred EEEEeecCCeEEEEEccCCeeee-eeeeeeeceEEEEEeccCCeEEEecc----CCC----CCceEEEEccCCceee--e
Q 023822 48 YLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSK----NGW----DESLRLLSLHDNKYLR--Y 116 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----~~~----d~~i~~~d~~~~~~~~--~ 116 (276)
+++.|+ ..+.+||..+++-.. .+..............++..++.++. .+. ...+..||..+++-.. .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 569999998877432 11111122233334457777777773 110 1237788887765322 1
Q ss_pred ecccCcceEEEEeccCCCEEEEeeCC--------CeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEee--C---
Q 023822 117 FKGHHDRVVSLSLCSSKDCFISGSLD--------RTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAF--G--- 181 (276)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--d--- 181 (276)
+...... .+++. -++.+++.|+.+ ..+.+||..+.+-...- ........+...++++++.+. +
T Consensus 85 ~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 85 LPSPRCL-FGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp BSSCEES-CEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred CCcchhc-eeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 1111111 11222 266677777742 45889999876533221 111111222224555555554 1
Q ss_pred --CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCC-----cEEEEECCCCcEEEEeecCCCCCCce
Q 023822 182 --GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRGTLLSTYNVKPVSRNST 254 (276)
Q Consensus 182 --~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~~~v 254 (276)
..+.+||+.+.+= .....+.........+. -++++++.|+.++ .+.+||..+.+-...-.. +......
T Consensus 163 ~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~ 237 (315)
T 4asc_A 163 CLNKMCVYDPKKFEW--KELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF-PQERSSL 237 (315)
T ss_dssp BCCCEEEEETTTTEE--EECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC-SSCCBSC
T ss_pred ccceEEEEeCCCCeE--EECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCC-CCcccce
Confidence 4688999876431 00111111111112222 2667778887654 588999887755433221 1111222
Q ss_pred EEEEECCCCcEEEEecCC
Q 023822 255 LEASFSPEGMFVISGRVS 272 (276)
Q Consensus 255 ~~~~~s~~g~~l~~~~~d 272 (276)
..+. -++++++.|+.+
T Consensus 238 ~~~~--~~~~l~v~GG~~ 253 (315)
T 4asc_A 238 SLVS--LVGTLYAIGGFA 253 (315)
T ss_dssp EEEE--ETTEEEEEEEEE
T ss_pred eEEE--ECCEEEEECCcc
Confidence 2222 266777777754
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00091 Score=52.12 Aligned_cols=191 Identities=7% Similarity=-0.025 Sum_probs=103.8
Q ss_pred CEEEEeecCCeEEEEEccCCeeeeeeeeee-eceEEEEEe--ccCCeEEEe--ccCCCCCceEEEEccCCceeeeecc--
Q 023822 47 SYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFT--SHPTTVIYS--SKNGWDESLRLLSLHDNKYLRYFKG-- 119 (276)
Q Consensus 47 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~--~~~~~l~~~--~~~~~d~~i~~~d~~~~~~~~~~~~-- 119 (276)
..++.++.||.|.-.|.++|+..-.++... .++....-. +.+..++++ .. ||.|..++..++.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~---dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFG---DGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCST---TTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECC---CCEEEEEECCCCcEEeeecccc
Confidence 478889999999999999999888876541 122111100 112233333 34 99999999888754443321
Q ss_pred --cCcceEE---EEe-c----cCCCEEEEeeCCCeEEEEeccCceeeeeEeecCCC---------eeEe------cCCCc
Q 023822 120 --HHDRVVS---LSL-C----SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP---------AAAY------DDQGL 174 (276)
Q Consensus 120 --~~~~i~~---~~~-~----~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---------~~~~------~~~~~ 174 (276)
...++.. ... . ..+..+++++.+|++...|+++++.+..+...... |... ..++.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 1111111 000 0 14557889999999999999999998888433211 1111 11234
Q ss_pred EEEEeeCCeEEEEecccCCCCCeeeeeecCCCCC--c-eEEEECCCCcEEEEeecCCcEEEEECCCCcEEE
Q 023822 175 VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISD--A-NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLS 242 (276)
Q Consensus 175 ~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~--i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 242 (276)
+++...+..+.+.+ ++++............... + ..-..+.++.+ +.++.||.|.-+|..+|+.+-
T Consensus 168 v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 55545566666666 3333211111111111000 0 00011234565 446788888888888887764
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.69 E-value=0.0041 Score=48.99 Aligned_cols=222 Identities=9% Similarity=0.037 Sum_probs=103.4
Q ss_pred CCCEEEEeec-CCeEEEEEccC--Ce--eeeeee-eeeeceEEEEEeccCCeEEEecc-C------CCCCceEEEEccCC
Q 023822 45 SSSYLVTASD-DESIRLYDVTA--AT--CLKTIN-SKKYGVDLVCFTSHPTTVIYSSK-N------GWDESLRLLSLHDN 111 (276)
Q Consensus 45 ~~~~l~~~~~-d~~i~iwd~~~--~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-~------~~d~~i~~~d~~~~ 111 (276)
++.+++.|+. ...+.++|+.+ .+ .+..+. .....- +++. -+++.++.|+. . ..-..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666666664 35688899863 22 222222 111111 2222 25666666654 1 01246889998876
Q ss_pred ceee--eecccCcceEEEEeccCCCEEEEeeCC---------------------------------------CeEEEEec
Q 023822 112 KYLR--YFKGHHDRVVSLSLCSSKDCFISGSLD---------------------------------------RTVLLWDQ 150 (276)
Q Consensus 112 ~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d---------------------------------------~~i~iwd~ 150 (276)
+-.. .+......-.++.. .++++++.|+.+ ..+.+||.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 4322 11101111112222 477788888764 57899999
Q ss_pred cCceeeeeEeec--C-C-CeeEecCCCcEEEEee-------CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCc
Q 023822 151 RAEKCQGLLRVQ--G-R-PAAAYDDQGLVFAVAF-------GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGR 219 (276)
Q Consensus 151 ~~~~~~~~~~~~--~-~-~~~~~~~~~~~l~~~~-------d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 219 (276)
.+.+-...-... . . ..++.. ++++++.+. ...+..||+.........+..+..........+...+++
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 254 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS 254 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTE
T ss_pred CCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCE
Confidence 877544332111 1 1 223333 455555543 245777776221111111111111111112222334667
Q ss_pred EEEEeecC----------------------CcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEecCCC
Q 023822 220 LMLLTTME----------------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 220 ~l~~~~~d----------------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+++.|+.+ ..+.+||+.+.+-...-... .....-. +...++++++.|+.++
T Consensus 255 iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~--~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 255 LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELS-QGRAYGV--SLPWNNSLLIIGGETA 327 (357)
T ss_dssp EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECS-SCCBSSE--EEEETTEEEEEEEECG
T ss_pred EEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCC-CCcccce--eEEeCCEEEEEeeeCC
Confidence 77777632 25788998876543322211 1122222 2334778888888664
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.66 E-value=0.0037 Score=57.31 Aligned_cols=198 Identities=14% Similarity=0.244 Sum_probs=121.0
Q ss_pred EEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC-ceeeeec
Q 023822 40 MDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYLRYFK 118 (276)
Q Consensus 40 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~-~~~~~~~ 118 (276)
.-.+|..+.+|.-. ..++.|||+++.+.+..+.... +|.--.|-.. +.|+..+ +..|.-|++... .+.+.+.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~-~~l~lVT----~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT----DNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCC-CeeEEEc----CCeEEEeccCCCCccHHHHh
Confidence 34567777777654 6789999999887777666544 5777777644 4444444 788999999743 4444554
Q ss_pred cc----CcceEEEEeccCCCEEEEee-------CCCeEEEEeccCceeeeeEeecCCCe--eEe---cCCCcEEEEee--
Q 023822 119 GH----HDRVVSLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPA--AAY---DDQGLVFAVAF-- 180 (276)
Q Consensus 119 ~~----~~~i~~~~~~~~~~~l~~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~---~~~~~~l~~~~-- 180 (276)
.| ...|..-..+++.++++..+ ..|.+.+|..+.+... .+.++.... +.. .+...+++.+.
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ-~iegha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-PIEGHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch-hhhHhHhhhheeccCCCCCCceEEEEEEec
Confidence 44 34677777788888776443 2477888887654322 121111111 111 11224555444
Q ss_pred --CCeEEEEecccC--CCCCee-----ee-eecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 181 --GGYIRMFDARKY--EKGPFD-----IF-SVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 181 --d~~i~~~d~~~~--~~~~~~-----~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.+.+++.++... ..+++. ++ .......-..++..++.-..++.-+.-|.|++||+.++.++..-+
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 378999998653 111111 11 111112234567777777778888899999999999998876544
No 325
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.65 E-value=0.026 Score=49.37 Aligned_cols=221 Identities=9% Similarity=0.054 Sum_probs=124.8
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeee-eeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCc
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 112 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~ 112 (276)
...|.++.-..+|. |-.|..+| +..||-.+.+..... ......|.++....++ .|.+++. + -+..||..+.+
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~---~-Gl~~yd~~~~~ 93 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTD---N-GILVYNYRADR 93 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEET---T-EEEEEETTTTE
T ss_pred cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeC---C-CeEEEeCCCCE
Confidence 46799999888774 55566777 666774322211100 1123457777666554 5666663 4 47889987764
Q ss_pred eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE------eecCCCeeEecCCCcEEEEeeCCeEEE
Q 023822 113 YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL------RVQGRPAAAYDDQGLVFAVAFGGYIRM 186 (276)
Q Consensus 113 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~d~~i~~ 186 (276)
...........|.++.. .++ .|..++.+ .|..||..+.+..... ....+.++....++.+.++.. +-+..
T Consensus 94 f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~ 169 (758)
T 3ott_A 94 YEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCR 169 (758)
T ss_dssp ECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEE
T ss_pred EECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhh
Confidence 33211112335666654 355 45556655 6888998765543221 122344666777888777654 45778
Q ss_pred EecccCCCCCeeeeeecC----CCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCC
Q 023822 187 FDARKYEKGPFDIFSVGG----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (276)
Q Consensus 187 ~d~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (276)
|+..+.+. ....... ....|.++...+++..|..|+. +-+..+|..+++...... .....|.++...++
T Consensus 170 ~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~---l~~~~i~~i~~d~~ 242 (758)
T 3ott_A 170 YIPSNGKF---EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEA---FHNNSIKSLALDGN 242 (758)
T ss_dssp EETTTTEE---EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEE---EEEEEEEEEEECTT
T ss_pred CccCCCce---EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccC---CCCCeEEEEEEcCC
Confidence 88765321 1111111 1224778887777765555654 458889987765432221 12346888888888
Q ss_pred CcEEEEecCCC
Q 023822 263 GMFVISGRVSP 273 (276)
Q Consensus 263 g~~l~~~~~dg 273 (276)
|.+.+.. .+|
T Consensus 243 g~lWigT-~~G 252 (758)
T 3ott_A 243 GDLLAGT-DNG 252 (758)
T ss_dssp CCEEEEE-TTE
T ss_pred CCEEEEe-CCc
Confidence 7765443 344
No 326
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.65 E-value=0.011 Score=48.33 Aligned_cols=104 Identities=11% Similarity=0.195 Sum_probs=58.5
Q ss_pred cceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEee----------cCCCeeEecCC----CcEEEEeeC------
Q 023822 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----------QGRPAAAYDDQ----GLVFAVAFG------ 181 (276)
Q Consensus 122 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------~~~~~~~~~~~----~~~l~~~~d------ 181 (276)
...+.|+|.|+|+++++-...+.|++++...++....... .+...++++|+ +.++++.+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3467999999998766654445798888654443222211 12237899994 554444431
Q ss_pred -------CeEEEEecccCCC---CCeeeee-ec-CCCCCceEEEECCCCcEEEEee
Q 023822 182 -------GYIRMFDARKYEK---GPFDIFS-VG-GDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 182 -------~~i~~~d~~~~~~---~~~~~~~-~~-~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
..|..|+...... ....++. +. ........++|.|+|.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 3566666543211 0111221 22 1123568899999998766644
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.59 E-value=0.03 Score=48.47 Aligned_cols=226 Identities=10% Similarity=0.051 Sum_probs=115.3
Q ss_pred CCCCEEEEeecC----CeEEEEEccCCeeeeee-e-----eeee-ceEEEEEec-cCCeEEEeccCCC---CCceEEEEc
Q 023822 44 KSSSYLVTASDD----ESIRLYDVTAATCLKTI-N-----SKKY-GVDLVCFTS-HPTTVIYSSKNGW---DESLRLLSL 108 (276)
Q Consensus 44 ~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~-~-----~~~~-~v~~~~~~~-~~~~l~~~~~~~~---d~~i~~~d~ 108 (276)
.++..++.|+.+ ..+.+||..+++....- . .... .-.+++..+ +++.++.|+..+. -..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46888998776533222 1 1111 122333333 6777777775321 246889998
Q ss_pred cCCceee--eecccCcceEEEEeccCCCEEEEeeCCC--eEEEEeccCceeeeeEe-------ecCCCeeEecCC-CcEE
Q 023822 109 HDNKYLR--YFKGHHDRVVSLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLR-------VQGRPAAAYDDQ-GLVF 176 (276)
Q Consensus 109 ~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~-~~~l 176 (276)
.+.+-.. .+...... .+++...++++++.|+.++ .+.+||..+.+-...-. ......+.+..+ ++++
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8754322 22211111 2233324778888888755 68999998875433221 111223555555 6666
Q ss_pred EEee---C-----CeEEEEecccCCC-CC--ee-eeeecCCCCCceEEEECCCCcEEEEeecC--------CcEEEEECC
Q 023822 177 AVAF---G-----GYIRMFDARKYEK-GP--FD-IFSVGGDISDANVVKFSNDGRLMLLTTME--------GHIHVLDSF 236 (276)
Q Consensus 177 ~~~~---d-----~~i~~~d~~~~~~-~~--~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~d~~ 236 (276)
+.|. + ..+.+||+.+..- .. .. +.........-.+++...++++++.|+.+ ..|.+||..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 6664 2 4688999887541 00 01 11111111111233333447777887743 459999998
Q ss_pred CCcEEEEeecCCC------CCCceEEEEECCCCcEEEEecC
Q 023822 237 RGTLLSTYNVKPV------SRNSTLEASFSPEGMFVISGRV 271 (276)
Q Consensus 237 ~~~~~~~~~~~~~------~~~~v~~~~~s~~g~~l~~~~~ 271 (276)
+.+-. ....... ....-.+....++|++++.||.
T Consensus 635 t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 635 SETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp TTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 87654 2221000 0000123444566688888874
No 328
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.58 E-value=0.0044 Score=48.88 Aligned_cols=141 Identities=13% Similarity=0.109 Sum_probs=78.0
Q ss_pred cceEEEEeccCCCEEEEeeCCCeEEEEeccCce-eeeeEe-----ecCCCeeEecCC----CcEEEEeeC--------Ce
Q 023822 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEK-CQGLLR-----VQGRPAAAYDDQ----GLVFAVAFG--------GY 183 (276)
Q Consensus 122 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~-----~~~~~~~~~~~~----~~~l~~~~d--------~~ 183 (276)
.....|+|.|++++ +++..+|.|+++|. .++ .+..+. ......++++|+ +.++++... ..
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 44688999999984 44566799999973 443 111111 123457899997 555554432 67
Q ss_pred EEEEecccCCCC---Ceeeee-ec-CCCCCceEEEECCCCcEEEEeec-------------CCcEEEEECCCCcE-----
Q 023822 184 IRMFDARKYEKG---PFDIFS-VG-GDISDANVVKFSNDGRLMLLTTM-------------EGHIHVLDSFRGTL----- 240 (276)
Q Consensus 184 i~~~d~~~~~~~---~~~~~~-~~-~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~----- 240 (276)
|..|+....... ...+.. +. ........++|.|+|.++++.+. .|.|.-++.. ++.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCC
Confidence 777876643110 001111 21 11224577999999986666432 2456666543 321
Q ss_pred ---EEEeecCCCCCCceEEEEECC-CCcEEEE
Q 023822 241 ---LSTYNVKPVSRNSTLEASFSP-EGMFVIS 268 (276)
Q Consensus 241 ---~~~~~~~~~~~~~v~~~~~s~-~g~~l~~ 268 (276)
...+.. ++ .....++|+| +|++.++
T Consensus 186 f~~~~i~a~--G~-rnp~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 186 FPNSPIWSY--GH-RNPQGIDWHRASGVMVAT 214 (354)
T ss_dssp STTCCEEEE--CC-SCCCEEEECTTTCCEEEE
T ss_pred CCCCcEEEE--cc-CCcceEEEeCCCCCEEEE
Confidence 111211 23 2346799999 6665554
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.53 E-value=0.026 Score=46.14 Aligned_cols=107 Identities=7% Similarity=0.042 Sum_probs=62.0
Q ss_pred CCcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeee--eeeee------eeeceEEEEEecc---CCeEEEeccC-----
Q 023822 34 NGRISSMDFHKSSSYLVTASDDESIRLYDVTAATCL--KTINS------KKYGVDLVCFTSH---PTTVIYSSKN----- 97 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~------~~~~v~~~~~~~~---~~~l~~~~~~----- 97 (276)
-.....|+|.|+|+++++-...+.|++++..+++.. ..+.. .......++|+|+ +..|.++...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345679999999987776544457888876555432 22211 2345779999996 6666655421
Q ss_pred -CC----CCceEEEEccCC-------ceee-eecc-cCcceEEEEeccCCCEEEEee
Q 023822 98 -GW----DESLRLLSLHDN-------KYLR-YFKG-HHDRVVSLSLCSSKDCFISGS 140 (276)
Q Consensus 98 -~~----d~~i~~~d~~~~-------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~ 140 (276)
+. ...|.-++.... +.+. .+.. .......|+|.|||.++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 00 134555655432 1111 1211 112368899999999766644
No 330
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.52 E-value=0.0048 Score=48.62 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=58.6
Q ss_pred cceEEEEeccCCCEEEEeeCCCeEEEEeccCceee--eeEe-----ecCCCeeEecCC----CcEEEEee-C-----CeE
Q 023822 122 DRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ--GLLR-----VQGRPAAAYDDQ----GLVFAVAF-G-----GYI 184 (276)
Q Consensus 122 ~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~-----~~~~~~~~~~~~----~~~l~~~~-d-----~~i 184 (276)
.....++|.|++++++ +..++.|++++ .++.. ..+. ......++++|+ +.++++.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3457899999998554 56679999998 33321 1111 123457899998 45444444 2 678
Q ss_pred EEEecccCCCC-Ceeeee-ec---CCCCCceEEEECCCCcEEEEe
Q 023822 185 RMFDARKYEKG-PFDIFS-VG---GDISDANVVKFSNDGRLMLLT 224 (276)
Q Consensus 185 ~~~d~~~~~~~-~~~~~~-~~---~~~~~i~~~~~~~~~~~l~~~ 224 (276)
..|+....... ...+.. +. ........++|.|+|.++++.
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 88887642110 011111 22 112234689999999766654
No 331
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.48 E-value=0.02 Score=43.93 Aligned_cols=197 Identities=8% Similarity=0.070 Sum_probs=107.1
Q ss_pred CCCCEEEEee--cCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCC-----------CCCceEEEEccC
Q 023822 44 KSSSYLVTAS--DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG-----------WDESLRLLSLHD 110 (276)
Q Consensus 44 ~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------~d~~i~~~d~~~ 110 (276)
+++..++... .++.|...+.+ |.....+.... +--+++++..|+.+.... ....|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 4566666553 35667766654 33334443322 245578999998886521 024677777766
Q ss_pred CceeeeecccCcceEEEEeccCCCEEEEee----CCCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee--CCeE
Q 023822 111 NKYLRYFKGHHDRVVSLSLCSSKDCFISGS----LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF--GGYI 184 (276)
Q Consensus 111 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--d~~i 184 (276)
.+... +.... ...|++++++|+-.. .+..|...++..... ..+..... ..++++++.|.-.. ..+|
T Consensus 98 ~~~~~-l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~~--~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 98 HGSTV-LDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHYL--FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCCEE-EECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSCC--CCSEEETTEEEEECTTTCCE
T ss_pred CcceE-eecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCCc--eEeeEECCEEEEEeCCCceE
Confidence 65332 22111 236778888877665 234566666664433 33322222 45677777666555 4778
Q ss_pred EEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC--CcEEEEECCCCcEEEEeecCCCCCCceEEEEECCC
Q 023822 185 RMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME--GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 262 (276)
Q Consensus 185 ~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (276)
.+.++...... .. ..+ .. ...++|++.+|+..... ..|..-++.... ...+. ...+ ..|+|+
T Consensus 170 y~~~l~g~~~~---~l-~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-----~~~~--~~~~~~ 233 (302)
T 3s25_A 170 YRYDTASQSEA---LF-YDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT-----EANI--EHYNVY 233 (302)
T ss_dssp EEEETTTTEEE---EE-ECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS-----CSCE--EEEEEE
T ss_pred EEEECCCCCEE---EE-eCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe-----CCCc--ceEEEC
Confidence 88777654321 11 221 12 23466988888876543 356666665444 33333 1122 236666
Q ss_pred CcEEEEe
Q 023822 263 GMFVISG 269 (276)
Q Consensus 263 g~~l~~~ 269 (276)
+++|+.+
T Consensus 234 g~~Iy~~ 240 (302)
T 3s25_A 234 GSLIFYQ 240 (302)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 7666654
No 332
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.45 E-value=0.067 Score=49.04 Aligned_cols=164 Identities=10% Similarity=0.174 Sum_probs=89.8
Q ss_pred ceEEEEccCCceeeeecc-cCcceEEEE---eccC-CCEEEEee----------CCCeEEEEeccCceeeeeEeec--CC
Q 023822 102 SLRLLSLHDNKYLRYFKG-HHDRVVSLS---LCSS-KDCFISGS----------LDRTVLLWDQRAEKCQGLLRVQ--GR 164 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~~-~~~~i~~~~---~~~~-~~~l~~~~----------~d~~i~iwd~~~~~~~~~~~~~--~~ 164 (276)
.|++.|..+.+.+..+.- ....+.+++ |..+ ..+|+.|+ ..|.|++|++...+. +.++.. ..
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL-~lv~~~~v~g 886 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL-QTVAEKEVKG 886 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEE-EEEEEEEESS
T ss_pred EEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEE-EEEEEEEcCC
Confidence 467777776666554431 223344444 3333 35788776 347899999975433 333221 12
Q ss_pred CeeEecC-CCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEE--ECCCCcEE
Q 023822 165 PAAAYDD-QGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVL--DSFRGTLL 241 (276)
Q Consensus 165 ~~~~~~~-~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~--d~~~~~~~ 241 (276)
...++.+ +| .|+++-...|++|++...+. .. ...... ..+..+.....+.++++|..-..|.++ +...++..
T Consensus 887 ~v~al~~~~g-~Lla~ig~~l~vy~l~~~~~--L~-~~~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~ 961 (1158)
T 3ei3_A 887 AVYSMVEFNG-KLLASINSTVRLYEWTTEKE--LR-TECNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE 961 (1158)
T ss_dssp CEEEEEEETT-EEEEEETTEEEEEEECTTSC--EE-EEEEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE
T ss_pred cCEEEeeeCC-EEEEEcCCEEEEEECCCCce--EE-EEeecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE
Confidence 2333333 34 56666689999999976432 11 111111 123333343457789999877777665 44444333
Q ss_pred EEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 242 STYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 242 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.+... .....++++.|-.++ .++.+..+|.
T Consensus 962 -~~a~D-~~~~~vta~~~ld~~-t~l~aD~~gN 991 (1158)
T 3ei3_A 962 -EIARD-FNPNWMSAVEILDDD-NFLGAENAFN 991 (1158)
T ss_dssp -EEEEC-CSCBCEEEEEEEETT-EEEEEETTSE
T ss_pred -EEEee-cccccEEEEEEEccC-cEEEEcCCCc
Confidence 33322 356778888887655 4555665553
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.40 E-value=0.03 Score=43.84 Aligned_cols=144 Identities=17% Similarity=0.153 Sum_probs=81.9
Q ss_pred CcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEe--------ecCCCeeEecCC----CcEEEEe---eCCeEE
Q 023822 121 HDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--------VQGRPAAAYDDQ----GLVFAVA---FGGYIR 185 (276)
Q Consensus 121 ~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~----~~~l~~~---~d~~i~ 185 (276)
-...+.|+|.|+++++++--..|.|++++...++...... ......++++|+ +.++++- .++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3456899999999877666558999999866554322111 223457999995 4444432 246677
Q ss_pred EEecccCC-----C-CCeeee-eec-CCCCCceEEEECCCCcEEEEeec-------------CCcEEEEECCCCcE----
Q 023822 186 MFDARKYE-----K-GPFDIF-SVG-GDISDANVVKFSNDGRLMLLTTM-------------EGHIHVLDSFRGTL---- 240 (276)
Q Consensus 186 ~~d~~~~~-----~-~~~~~~-~~~-~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~~---- 240 (276)
-|...... . ....++ .+. ........++|.|+|.++++.+. .|.|.-.+.. ++.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCC
Confidence 77665421 1 111122 122 12224567999999987666432 3455555543 221
Q ss_pred ----EEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 241 ----LSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 241 ----~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
...+.. ++. ....++|+|+|.+.++
T Consensus 190 Pf~~~~i~a~--G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 190 PFPGSPVYSY--GHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp SSTTCCEEEB--CCS-BCCEEEECTTCCEEEE
T ss_pred CCCCCeEEee--CCC-CcceEEECCCCCEEEE
Confidence 112221 343 3457999999876654
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.33 E-value=0.033 Score=42.87 Aligned_cols=192 Identities=10% Similarity=0.050 Sum_probs=95.9
Q ss_pred cCCCCEEEEeec----C-------CeEEEEEccCCeeeee--eeeeeeceEEEEEeccCCeEEEeccC-----CCCCceE
Q 023822 43 HKSSSYLVTASD----D-------ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKN-----GWDESLR 104 (276)
Q Consensus 43 ~~~~~~l~~~~~----d-------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~d~~i~ 104 (276)
..++..++.|+. + ..+.+||..+.+-... +......- .++. -+++.++.++.. .....+.
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEE
Confidence 346777777773 1 1277888877653221 21111111 1222 256666666631 1235688
Q ss_pred EEEccCCceee--eecccCcceEEEEeccCCCEEEEeeC-C-----CeEEEEeccCceeeeeE--eecCCC-eeEecCCC
Q 023822 105 LLSLHDNKYLR--YFKGHHDRVVSLSLCSSKDCFISGSL-D-----RTVLLWDQRAEKCQGLL--RVQGRP-AAAYDDQG 173 (276)
Q Consensus 105 ~~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~-d-----~~i~iwd~~~~~~~~~~--~~~~~~-~~~~~~~~ 173 (276)
+||+.+.+-.. .+....... +++ ..++++++.|+. + ..+.+||+.+.+-...- ...... .++.. ++
T Consensus 121 ~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~ 197 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPYVVYGH-TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DG 197 (315)
T ss_dssp EEETTTTEEEECCCCSSCCBSC-EEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT
T ss_pred EECCCCCcEeECCCCCCcccce-eEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CC
Confidence 99988764322 121111111 222 236677777776 2 46899998876543322 111111 22222 55
Q ss_pred cEEEEee-C-----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC--------------CcEEEE
Q 023822 174 LVFAVAF-G-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME--------------GHIHVL 233 (276)
Q Consensus 174 ~~l~~~~-d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~i~ 233 (276)
++++.+. + ..+.+||+.+.+= ..+............+.+ ++++++.|+.+ ..+.+|
T Consensus 198 ~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y 273 (315)
T 4asc_A 198 RIIVAAGVTDTGLTSSAEVYSITDNKW--APFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRY 273 (315)
T ss_dssp EEEEEEEECSSSEEEEEEEEETTTTEE--EEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred EEEEEeccCCCCccceEEEEECCCCeE--EECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEe
Confidence 5555554 3 2588888876421 111111111111222222 56777777753 247789
Q ss_pred ECCCCcEEEE
Q 023822 234 DSFRGTLLST 243 (276)
Q Consensus 234 d~~~~~~~~~ 243 (276)
|+.+.+-...
T Consensus 274 d~~~~~W~~~ 283 (315)
T 4asc_A 274 NEEEKKWEGV 283 (315)
T ss_dssp ETTTTEEEEE
T ss_pred cCCCChhhhh
Confidence 9887765444
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.25 E-value=0.041 Score=42.43 Aligned_cols=214 Identities=12% Similarity=0.132 Sum_probs=103.5
Q ss_pred EEEEeecCCeEEEEEccCCeeeee-eeeeeeceEEEEEeccCCeEEEeccC----C----CCCceEEEEccCCceee--e
Q 023822 48 YLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKN----G----WDESLRLLSLHDNKYLR--Y 116 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~----~----~d~~i~~~d~~~~~~~~--~ 116 (276)
+++.|+. .+..||..+.+-... +..............++..++.|+.. + ....+..||..+.+-.. .
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4455543 488999887764431 11111122233334567777777731 0 01127788887664322 1
Q ss_pred ecccCcceEEEEeccCCCEEEEeeCC-------CeEEEEeccCceeeeeEeec--C-CCeeEecCCCcEEEEee--C---
Q 023822 117 FKGHHDRVVSLSLCSSKDCFISGSLD-------RTVLLWDQRAEKCQGLLRVQ--G-RPAAAYDDQGLVFAVAF--G--- 181 (276)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~--d--- 181 (276)
+...........+ ++++++.|+.+ ..+.+||+.+.+-...-... . ...++. .++++++.+. +
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSC
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCC
Confidence 1111111122222 66777777754 35888998876543321111 1 112222 4566665554 1
Q ss_pred --CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC-----CcEEEEECCCCcEEEEeecCCCCCCce
Q 023822 182 --GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNST 254 (276)
Q Consensus 182 --~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v 254 (276)
..+.+||+.+.+= ...............+. -++++++.|+.+ ..+.+||..+.+-...-.. +......
T Consensus 173 ~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~ 247 (318)
T 2woz_A 173 CTNRVFIYNPKKGDW--KDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF-PQERSSI 247 (318)
T ss_dssp BCCCEEEEETTTTEE--EEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC-SSCCBSC
T ss_pred ccceEEEEcCCCCEE--EECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC-CCcccce
Confidence 4588999876431 11111111111112222 256777777643 3577899887764432221 1111111
Q ss_pred EEEEECCCCcEEEEecCCC
Q 023822 255 LEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 255 ~~~~~s~~g~~l~~~~~dg 273 (276)
..+ ..++++++.|+.++
T Consensus 248 ~~~--~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 248 SLV--SLAGSLYAIGGFAM 264 (318)
T ss_dssp EEE--EETTEEEEECCBCC
T ss_pred EEE--EECCEEEEECCeec
Confidence 222 23677888887654
No 336
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.19 E-value=0.036 Score=43.64 Aligned_cols=141 Identities=9% Similarity=0.091 Sum_probs=76.2
Q ss_pred ceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE---e------ecCCCeeEecCC----CcEEEEeeC--------
Q 023822 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---R------VQGRPAAAYDDQ----GLVFAVAFG-------- 181 (276)
Q Consensus 123 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~------~~~~~~~~~~~~----~~~l~~~~d-------- 181 (276)
....|+|.|+++.|+++...|.|++++.. +.....+ . ......++++|+ +.++++...
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45789999999834455678999999854 3221111 0 112347899995 555544331
Q ss_pred CeEEEEecccCCCC--Ce-eeee-ec---CCCCCceEEEECCCCcEEEEeec-------------CCcEEEEECCCCc--
Q 023822 182 GYIRMFDARKYEKG--PF-DIFS-VG---GDISDANVVKFSNDGRLMLLTTM-------------EGHIHVLDSFRGT-- 239 (276)
Q Consensus 182 ~~i~~~d~~~~~~~--~~-~~~~-~~---~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~~-- 239 (276)
..|..|++...... .. .+.. +. ........++|.|+|.++++.+. .|.|.-++.. ++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p 176 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIP 176 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCC
Confidence 25666666432110 01 1111 11 11123467999999976555433 2467667754 32
Q ss_pred -----------EEEEeecCCCCCCceEEEEECC-CCcEEEE
Q 023822 240 -----------LLSTYNVKPVSRNSTLEASFSP-EGMFVIS 268 (276)
Q Consensus 240 -----------~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~ 268 (276)
....+.. ++ .....++|+| +|++.++
T Consensus 177 ~~npf~~~~~~~~~i~a~--G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSY--GI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TTCTTTTSTTSCTTEEEE--CC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCcCCCCCCccEEEE--cC-cCccceEEECCCCCEEEE
Confidence 1122221 23 3467899999 6665543
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.12 E-value=0.064 Score=42.07 Aligned_cols=196 Identities=8% Similarity=-0.027 Sum_probs=94.2
Q ss_pred CCCEEEEeec-C---------CeEEEEEccCCeeeeeeeee-eeceEEEEEeccCCeEEEeccCC---------------
Q 023822 45 SSSYLVTASD-D---------ESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNG--------------- 98 (276)
Q Consensus 45 ~~~~l~~~~~-d---------~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~--------------- 98 (276)
++.+++.|+. + ..+.+||+.+.+-...-... .......+...+++.++.++..+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 144 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGK 144 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCC
Confidence 5667777765 2 46889998876533221111 11111212224677777776521
Q ss_pred ---------------------CCCceEEEEccCCceee--eecccCcceEEEEeccCCCEEEEeeC------CCeEEEEe
Q 023822 99 ---------------------WDESLRLLSLHDNKYLR--YFKGHHDRVVSLSLCSSKDCFISGSL------DRTVLLWD 149 (276)
Q Consensus 99 ---------------------~d~~i~~~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~iwd 149 (276)
....+.+||+.+.+-.. .+......-.+++. -++++++.|+. ...+..||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d 223 (357)
T 2uvk_A 145 DSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELD 223 (357)
T ss_dssp CHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEE
T ss_pred cccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEE
Confidence 12578899988764322 22211111022222 25667777664 23577787
Q ss_pred c--cCceeeeeEee--cC--CCeeEecCCCcEEEEee-C----------------------CeEEEEecccCCCCCeeee
Q 023822 150 Q--RAEKCQGLLRV--QG--RPAAAYDDQGLVFAVAF-G----------------------GYIRMFDARKYEKGPFDIF 200 (276)
Q Consensus 150 ~--~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~-d----------------------~~i~~~d~~~~~~~~~~~~ 200 (276)
+ .+.+-...-.. .. ....+...++++++.+. + ..+.+||+.+.+= ..+.
T Consensus 224 ~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W--~~~~ 301 (357)
T 2uvk_A 224 FTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW--DKSG 301 (357)
T ss_dssp CC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C--EEEE
T ss_pred ecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce--eeCC
Confidence 6 44332221111 11 11223333555655554 1 2577888876431 1122
Q ss_pred eecCCCCCceEEEECCCCcEEEEeecCC------cEEEEECCCCcEEEEee
Q 023822 201 SVGGDISDANVVKFSNDGRLMLLTTMEG------HIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 201 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~ 245 (276)
.+......-. +...++++++.|+.++ .|.++++++++.+....
T Consensus 302 ~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 302 ELSQGRAYGV--SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp ECSSCCBSSE--EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred CCCCCcccce--eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 2222222222 2334678888888543 36667888887766554
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.03 E-value=0.071 Score=41.07 Aligned_cols=192 Identities=9% Similarity=0.039 Sum_probs=94.3
Q ss_pred cCCCCEEEEeec----CC-------eEEEEEccCCeeeee--eeeeeeceEEEEEeccCCeEEEeccCC----CCCceEE
Q 023822 43 HKSSSYLVTASD----DE-------SIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNG----WDESLRL 105 (276)
Q Consensus 43 ~~~~~~l~~~~~----d~-------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~----~d~~i~~ 105 (276)
..++..++.|+. ++ .+.+||..+.+-... +...... .+++. .+++.++.++... ....+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEE
Confidence 346677777773 12 177888876654322 1111111 12222 2566666766410 1145788
Q ss_pred EEccCCceeee--ecccCcceEEEEeccCCCEEEEeeC------CCeEEEEeccCceeeeeE--eecCC-CeeEecCCCc
Q 023822 106 LSLHDNKYLRY--FKGHHDRVVSLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLL--RVQGR-PAAAYDDQGL 174 (276)
Q Consensus 106 ~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~--~~~~~-~~~~~~~~~~ 174 (276)
||+.+.+-... +...... .+++. .++++++.|+. -..+.+||+.+.+-...- ..... ..++.. +++
T Consensus 132 yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 208 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGK 208 (318)
T ss_dssp EETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred EeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCE
Confidence 88877643221 1111111 11222 46777777764 235899999877543322 11111 122332 455
Q ss_pred EEEEee-C-----CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecC--------------CcEEEEE
Q 023822 175 VFAVAF-G-----GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTME--------------GHIHVLD 234 (276)
Q Consensus 175 ~l~~~~-d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------------g~i~i~d 234 (276)
+++.+. + ..+.+||+.+.+= ..+............+. -++++++.|+.+ ..+.+||
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd 284 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKW--EVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYE 284 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCE--EECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEE
T ss_pred EEEEcCcCCCCccceEEEEECCCCeE--EECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEe
Confidence 555554 2 4577888876431 11111111111112222 356777777653 3588899
Q ss_pred CCCCcEEEE
Q 023822 235 SFRGTLLST 243 (276)
Q Consensus 235 ~~~~~~~~~ 243 (276)
..+.+-...
T Consensus 285 ~~~~~W~~~ 293 (318)
T 2woz_A 285 DDKKEWAGM 293 (318)
T ss_dssp TTTTEEEEE
T ss_pred CCCCEehhh
Confidence 888765544
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.89 E-value=0.15 Score=42.43 Aligned_cols=221 Identities=10% Similarity=0.071 Sum_probs=127.0
Q ss_pred CCCEEEEee-cCCeEEEEEccCCeeeeeeeee-eeceEEEEEe--ccCCeEEEeccCC----CCCce---------EE--
Q 023822 45 SSSYLVTAS-DDESIRLYDVTAATCLKTINSK-KYGVDLVCFT--SHPTTVIYSSKNG----WDESL---------RL-- 105 (276)
Q Consensus 45 ~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~~~----~d~~i---------~~-- 105 (276)
||++|..-. .+..|-..+++..++-+.+... ...+..++|. |+..+++..+... .||.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~ 220 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN 220 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence 677887766 4567888888888877666543 3467888886 6888888776521 13221 11
Q ss_pred -EEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCC---------------eEEEEe--------------------
Q 023822 106 -LSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDR---------------TVLLWD-------------------- 149 (276)
Q Consensus 106 -~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---------------~i~iwd-------------------- 149 (276)
.|..+.+...++. -.+....+...+++.+.++.+.+. .+.++|
T Consensus 221 ~iD~~tm~v~~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~g 299 (638)
T 3sbq_A 221 AIDAETMEMAFQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSK 299 (638)
T ss_dssp EEETTTCSEEEEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCC
T ss_pred EEcCCccEEEEEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCC
Confidence 1222333322221 122233344566777766655321 244444
Q ss_pred -----ccC----ce-eeeeE-eecCCCeeEecCCCcEEEEee--CCeEEEEecccCCC-------CCe-eeeeecCCCCC
Q 023822 150 -----QRA----EK-CQGLL-RVQGRPAAAYDDQGLVFAVAF--GGYIRMFDARKYEK-------GPF-DIFSVGGDISD 208 (276)
Q Consensus 150 -----~~~----~~-~~~~~-~~~~~~~~~~~~~~~~l~~~~--d~~i~~~d~~~~~~-------~~~-~~~~~~~~~~~ 208 (276)
.+. +. ....+ .......+..+|+|++++++. +.++.++|++.... .+. .+.....-...
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlG 379 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLG 379 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSC
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCc
Confidence 332 11 11111 112234688999999999888 89999999985211 000 01111112345
Q ss_pred ceEEEECCCCcEEEEeecCCcEEEEECCCC----------cEEEEeecCCCCCCceEEEEE------CCCCcEEEEec
Q 023822 209 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRG----------TLLSTYNVKPVSRNSTLEASF------SPEGMFVISGR 270 (276)
Q Consensus 209 i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~----------~~~~~~~~~~~~~~~v~~~~~------s~~g~~l~~~~ 270 (276)
....+|.++|....+---|..|.-|++... ..+..+. .|-. +-.+.- .|||++|++..
T Consensus 380 PlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~d---v~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 380 PLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLD---VHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEE---CSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred ccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccc---cccC-CcccccCCCccCCCCccEEEEec
Confidence 678999999965556668999999998653 3455555 2322 222322 68999998863
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.81 E-value=0.11 Score=39.83 Aligned_cols=176 Identities=9% Similarity=0.051 Sum_probs=102.2
Q ss_pred EEEcCCCCEEEEeecC--------------CeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEec--cCCCCCce
Q 023822 40 MDFHKSSSYLVTASDD--------------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS--KNGWDESL 103 (276)
Q Consensus 40 ~~~~~~~~~l~~~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~d~~i 103 (276)
--+++++.+|+-+... ..|+..+++.++... +... ....|+++++.|+... .. ....|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~----~~~~~s~~g~~Iy~~~~~~~-~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD----PCIYASLIGNYIYYLHYDTQ-TATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS----CEEEEEEETTEEEEEEESSS-SCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC----CccEEEEeCCEEEEEeecCC-CCceE
Confidence 3467888888876543 367777776554322 2211 1236788999998876 21 15566
Q ss_pred EEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeC-CCeEEEEeccCceeeeeEeecCCCeeEecCCCcEEEEee--
Q 023822 104 RLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFAVAF-- 180 (276)
Q Consensus 104 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 180 (276)
...++.... ...+..+.. ..++++++.|+-.+. ...|...++........+. . .....+.|++..|+-..
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~-~~~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-C-NCYKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-S-CEEEEEEEETTEEEEEEGG
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-C-CccceeeecCCEEEEEEcC
Confidence 666766433 344443332 456778887775554 5678888887765443332 2 22234568777766655
Q ss_pred C-CeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEee--cCCcEEEEECCC
Q 023822 181 G-GYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFR 237 (276)
Q Consensus 181 d-~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~ 237 (276)
+ ..|..-++..... ..+.. ..+ ..|+|+++.|+.++ ..+.|..-++..
T Consensus 205 ~~~~I~~~~ldG~~~-----~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 205 RDNAIVHVNINNPNP-----VVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp GTTEEEEECSSSCCC-----EECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred CCcEEEEEECCCCCe-----EEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 2 4677777665442 11111 122 34788888887653 235677777643
No 341
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.73 E-value=0.35 Score=44.48 Aligned_cols=227 Identities=11% Similarity=0.099 Sum_probs=121.2
Q ss_pred CCcEEEEEEcCC------CCEEEEeec-CCeEEEEEccCCeeeeeeeee-eeceEEEEEe--ccCCeEEEeccCCCCCce
Q 023822 34 NGRISSMDFHKS------SSYLVTASD-DESIRLYDVTAATCLKTINSK-KYGVDLVCFT--SHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 34 ~~~v~~~~~~~~------~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~~~~d~~i 103 (276)
...|.|+++.|. +++++.|.. |++++|+++.+.+.+....-. .....++.+. ....++.++-. ||.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~---dG~l 629 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG---DGAL 629 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEET---TSEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeC---CCeE
Confidence 568999999863 468999996 999999999876655432211 1123333332 23356777776 8888
Q ss_pred EEEEcc--CCceee---eecccCcceEEEEeccCCC-EEEEeeCCCeEEEEeccCceeeeeEeecCCC-eeEecCC--Cc
Q 023822 104 RLLSLH--DNKYLR---YFKGHHDRVVSLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRP-AAAYDDQ--GL 174 (276)
Q Consensus 104 ~~~d~~--~~~~~~---~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~--~~ 174 (276)
.-+.+. +++... .+.+ ..++.-..+...+. -+++++ +....+|--+..-....+....+. ...|+.. ..
T Consensus 630 ~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 630 FYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTT
T ss_pred EEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcCCceEEeccChHHhceEeccCcccCCC
Confidence 766654 343321 1222 33444444443443 233333 344444443322111111222222 3344432 23
Q ss_pred EEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeec----------------------------
Q 023822 175 VFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTM---------------------------- 226 (276)
Q Consensus 175 ~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------------------------- 226 (276)
-++...++.+++..+.... ......++- ...+..++++|..+.++.+..
T Consensus 708 g~v~~~~~~LrI~~i~~~~--~~~~~~ipL-~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1158)
T 3ei3_A 708 SLALANNSTLTIGTIDEIQ--KLHIRTVPL-YESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 784 (1158)
T ss_dssp EEEEECSSCEEEEEECCSS--SEEEEEEEC-SSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEEC
T ss_pred cEEEEcCCceEEEEecccC--CeeEEEEeC-CCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccc
Confidence 4445556679998886543 233333322 246778888887665444321
Q ss_pred ---------------------CCcEEEEECCCCcEEEEeecCCCCCCceEEEE---ECCC-CcEEEEec
Q 023822 227 ---------------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS---FSPE-GMFVISGR 270 (276)
Q Consensus 227 ---------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~---~s~~-g~~l~~~~ 270 (276)
-+.|++.|..+.+.+..+... ....+.+++ |..+ ..+|++|+
T Consensus 785 ~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~--~nE~~~sv~~v~~~~~~~~~lvVGT 851 (1158)
T 3ei3_A 785 SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFL--QNEYALSLVSCKLGKDPNTYFIVGT 851 (1158)
T ss_dssp CCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECC--TTEEEEEEEEECCTTCCCCEEEEEE
T ss_pred ccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCC--CCcceEEEEEEEEccCCCEEEEEEe
Confidence 124778888888887777643 234444444 4333 46888776
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.67 E-value=0.29 Score=42.76 Aligned_cols=221 Identities=10% Similarity=0.037 Sum_probs=123.5
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceee
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~ 115 (276)
.|.++...+++..|..|.. +-+..+|..+++...........|.++....++...+ ++. + -+.+++..+++...
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~---~-Gl~~~~~~~~~~~~ 265 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD---N-GLYVYHNDTTPLQH 265 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET---T-EEEEECCTTSCCEE
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC---C-ceeEEecCCCcEEE
Confidence 4788888777665555554 3588888877654332222344577877766665544 443 4 47788876654322
Q ss_pred eec-------ccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE---------eecCCCeeEecCCCcEEEEe
Q 023822 116 YFK-------GHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL---------RVQGRPAAAYDDQGLVFAVA 179 (276)
Q Consensus 116 ~~~-------~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~ 179 (276)
... -....|.++....++.+ -.|+..| +.++.... ....+ ....+.++....++.+.+++
T Consensus 266 ~~~~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 266 IIHDSRNIQSLTNNIIWNIFADQEHNI-WLGTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp ECCCTTCTTSCSCSCEEEEEECTTCCE-EEEESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred EEcCCCCcCcCCcCeEEEEEEcCCCCE-EEEeCCc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 111 02345888888777764 4455556 55443221 11111 11234566677788887776
Q ss_pred eCCeEEEEecccCCCCCeeeeeec-----CCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCC-C--CC
Q 023822 180 FGGYIRMFDARKYEKGPFDIFSVG-----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP-V--SR 251 (276)
Q Consensus 180 ~d~~i~~~d~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~--~~ 251 (276)
.+ -+..++..+.....+..+... .....|.++.-.++|++.+ |+ ++-+..||..+++...-..... . ..
T Consensus 342 ~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~ 418 (758)
T 3ott_A 342 AN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNT 418 (758)
T ss_dssp TT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBS
T ss_pred CC-cceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCC
Confidence 44 577777654322222122111 1123578888888887544 55 4569999988775543221100 0 23
Q ss_pred CceEEEEECCCCcEEEEe
Q 023822 252 NSTLEASFSPEGMFVISG 269 (276)
Q Consensus 252 ~~v~~~~~s~~g~~l~~~ 269 (276)
..|.++.-.++|++.+..
T Consensus 419 ~~v~~i~~d~~g~lWigT 436 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWIST 436 (758)
T ss_dssp SSEEEEEECTTSEEEEEE
T ss_pred ceEEEEEEcCCCCEEEEE
Confidence 468888888888755543
No 343
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=96.17 E-value=0.57 Score=40.64 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=116.8
Q ss_pred EEEE-EcCCCCEEEEee-----cCCeEEEEEccCCeeeee-eeeeee--------ceEEEEEeccCCeEEEecc------
Q 023822 38 SSMD-FHKSSSYLVTAS-----DDESIRLYDVTAATCLKT-INSKKY--------GVDLVCFTSHPTTVIYSSK------ 96 (276)
Q Consensus 38 ~~~~-~~~~~~~l~~~~-----~d~~i~iwd~~~~~~~~~-~~~~~~--------~v~~~~~~~~~~~l~~~~~------ 96 (276)
..+. ++|++++++.+- .-..++++|+.+++.+.. +. ... ....++|. ++..++.+..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 3445 889998877542 223799999999987642 22 111 12455887 4444444321
Q ss_pred --CCCCCceEEEEccCCc--eeeeecccCcce-EEEEeccCCC-----EEEEeeC---CCeEEEEeccC--ceeeeeEee
Q 023822 97 --NGWDESLRLLSLHDNK--YLRYFKGHHDRV-VSLSLCSSKD-----CFISGSL---DRTVLLWDQRA--EKCQGLLRV 161 (276)
Q Consensus 97 --~~~d~~i~~~d~~~~~--~~~~~~~~~~~i-~~~~~~~~~~-----~l~~~~~---d~~i~iwd~~~--~~~~~~~~~ 161 (276)
.+....|+.|.+-+.. -...+.+....+ .....+++++ .+++.+. ...+.+.|... ++. ..+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeec
Confidence 1224678888876542 222333333222 2344456665 2444332 24566666553 221 22222
Q ss_pred cCCCeeEecCCCcEEEEe-----------eCCeEEEEecccCCC-----CCeeeeeecCCCCCceEEEECCCCcEEEEee
Q 023822 162 QGRPAAAYDDQGLVFAVA-----------FGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVKFSNDGRLMLLTT 225 (276)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~-----------~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 225 (276)
..-..+....++.+++.. -.+.|...|+..... ..............+..+.+..+ .++++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~ 367 (711)
T 4hvt_A 289 PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATY 367 (711)
T ss_dssp CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEE
T ss_pred CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEE
Confidence 222233344566655532 256788999877421 11222122333446778888876 5666666
Q ss_pred cCCc--EEEEECCCCc-EEEE-eecCCCCCCceEEEEECCCCcEE
Q 023822 226 MEGH--IHVLDSFRGT-LLST-YNVKPVSRNSTLEASFSPEGMFV 266 (276)
Q Consensus 226 ~dg~--i~i~d~~~~~-~~~~-~~~~~~~~~~v~~~~~s~~g~~l 266 (276)
.++. +.++++.+++ .... +... ..+.+.....++++..+
T Consensus 368 ~~~~~~l~~~~~~~g~~~~~~~i~lp--~~~~~~~~~~~~~~~~~ 410 (711)
T 4hvt_A 368 DNVVAKVVTFTLENEQWTKPVVLKLP--YQNAIFGMSSYEEEEEA 410 (711)
T ss_dssp ETTEEEEEEECEETTEECCCEEECCC--STTCEEEEECCTTCSCE
T ss_pred ECCEEEEEEEECCCCceEEEeccCCC--CCeEEEEEeecCcCCEE
Confidence 6764 6777776665 2333 3311 13456666777776543
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.93 E-value=0.21 Score=41.56 Aligned_cols=73 Identities=10% Similarity=0.085 Sum_probs=54.5
Q ss_pred ceEEEEEeccCCeEEEeccCCCCCceEEEEccCC------ce-------eeeecccCcceEEEEeccCCCEEEEeeCCCe
Q 023822 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN------KY-------LRYFKGHHDRVVSLSLCSSKDCFISGSLDRT 144 (276)
Q Consensus 78 ~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~------~~-------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 144 (276)
....+.++|+|+++++++.- +.++.++|++.. +. ....+ -.-.....+|.++|+...+.-.|..
T Consensus 324 sPHGv~vsPDGkyi~v~GKL--sptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKL--SPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SCCCEEECTTSCEEEEECTT--SSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCcceeeCCCCCEEEEcCCC--CCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 45678999999999999874 899999998742 11 11222 2234577899999976777778999
Q ss_pred EEEEeccCc
Q 023822 145 VLLWDQRAE 153 (276)
Q Consensus 145 i~iwd~~~~ 153 (276)
|.-|++...
T Consensus 401 vvkWni~~a 409 (638)
T 3sbq_A 401 VVKWNMEEA 409 (638)
T ss_dssp EEEEEHHHH
T ss_pred EEEEeccHH
Confidence 999998753
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.64 E-value=0.73 Score=37.69 Aligned_cols=107 Identities=7% Similarity=-0.006 Sum_probs=58.9
Q ss_pred CcEEEEEEcCCCC-EEEEeecCCeEEEEEccCCe---eeeeee---------eeeeceEEEEEecc---CCeEEEeccCC
Q 023822 35 GRISSMDFHKSSS-YLVTASDDESIRLYDVTAAT---CLKTIN---------SKKYGVDLVCFTSH---PTTVIYSSKNG 98 (276)
Q Consensus 35 ~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~---~~~~~~---------~~~~~v~~~~~~~~---~~~l~~~~~~~ 98 (276)
..-..|+|.|++. .|+++...|.|++++..... .+..+. ........|+|+|+ +..|.+.....
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999986 45556688999999754221 122111 11356788999986 33444332100
Q ss_pred CC----------CceEEEEccCC----------ceeeeec--ccCcceEEEEeccCCCEEEEeeC
Q 023822 99 WD----------ESLRLLSLHDN----------KYLRYFK--GHHDRVVSLSLCSSKDCFISGSL 141 (276)
Q Consensus 99 ~d----------~~i~~~d~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~ 141 (276)
.+ ..|.-|.+..+ +.+..+. ...-.-..|+|.|||.++++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 01 14444555321 1222221 11123578999999987666554
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.21 E-value=0.31 Score=37.95 Aligned_cols=103 Identities=7% Similarity=0.070 Sum_probs=64.5
Q ss_pred CeEEEeccCCCCCceEEEEccCCceeeeeccc-CcceEEEEec--c-CCCEEEEe-eCCCeEEEEeccCceeeeeEeecC
Q 023822 89 TTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH-HDRVVSLSLC--S-SKDCFISG-SLDRTVLLWDQRAEKCQGLLRVQG 163 (276)
Q Consensus 89 ~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~--~-~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~ 163 (276)
..+++++. ||.|.-+|..+|+...+++.. ..++....-. + ++..++.. +.||.|..+|..++.....+....
T Consensus 11 ~~V~v~t~---dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADV---EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEET---TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeC---CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 35667776 999999999999998888654 1222221100 1 22334343 689999999988875544332111
Q ss_pred ---CCeeEe------------cCCCcEEEEeeCCeEEEEecccCCC
Q 023822 164 ---RPAAAY------------DDQGLVFAVAFGGYIRMFDARKYEK 194 (276)
Q Consensus 164 ---~~~~~~------------~~~~~~l~~~~d~~i~~~d~~~~~~ 194 (276)
...+.. +.++.+++++.++.+...|+++++.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 111221 2456666777799999999998774
No 347
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.17 E-value=0.82 Score=35.41 Aligned_cols=197 Identities=9% Similarity=0.076 Sum_probs=107.6
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccC-Ceeeeeeeee----eeceEEEEEeccCCeEEEeccC----CCCCceEE
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSK----KYGVDLVCFTSHPTTVIYSSKN----GWDESLRL 105 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~----~~d~~i~~ 105 (276)
..|.-=.|-.+ +.|+..+. ..|+-|+++. ..+.+.+..| ...|.....+++.+.++..+-. ...|.+.+
T Consensus 107 e~VvfWkWis~-~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 184 (365)
T 2xzh_A 107 DDVTFWKWISL-NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 184 (365)
T ss_dssp SCEEEEEECSS-SEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEecCC-CeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEE
Confidence 34444455433 44554433 5799999874 3455555544 3467777888888877665431 12578899
Q ss_pred EEccCCceeeeecccCcceEEEEeccC---CCEEEEeeCC---CeEEEEeccCc---ee-----eeeE--eecC----CC
Q 023822 106 LSLHDNKYLRYFKGHHDRVVSLSLCSS---KDCFISGSLD---RTVLLWDQRAE---KC-----QGLL--RVQG----RP 165 (276)
Q Consensus 106 ~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d---~~i~iwd~~~~---~~-----~~~~--~~~~----~~ 165 (276)
|..+.+ ..+.+++|......+.+..+ .++|+.+... +++++-++... .. ...+ .... ..
T Consensus 185 YS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPV 263 (365)
T 2xzh_A 185 YSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 263 (365)
T ss_dssp EETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEE
T ss_pred Eeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceE
Confidence 987654 45677888776555544322 1244444432 58999998543 11 1111 1111 11
Q ss_pred eeEecCCC-cEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC
Q 023822 166 AAAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (276)
Q Consensus 166 ~~~~~~~~-~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 238 (276)
.+..++.. -+++...-|.|++||++++.. ++...-...+|-..+-+....=++.....|.|.-..+...
T Consensus 264 amqvs~kygviyviTK~G~ihlyDleTgt~----i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 264 AMQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEEecccCCEEEEEeCCcEEEEEEcccCcE----EEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 45556544 445555589999999999765 4443333334433333332222333445555555444443
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.11 E-value=1.5 Score=37.99 Aligned_cols=184 Identities=10% Similarity=0.042 Sum_probs=94.9
Q ss_pred ccCCeEEEeccCC-CCCceEEEEccCCceeeee-c------ccCcceEEEEecc-CCCEEEEeeCC------CeEEEEec
Q 023822 86 SHPTTVIYSSKNG-WDESLRLLSLHDNKYLRYF-K------GHHDRVVSLSLCS-SKDCFISGSLD------RTVLLWDQ 150 (276)
Q Consensus 86 ~~~~~l~~~~~~~-~d~~i~~~d~~~~~~~~~~-~------~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~iwd~ 150 (276)
.++..++.|+..+ .-..+.+||..+++-...- . .....-.+++..+ ++++++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4666777776421 1346888998877533222 1 1111122333333 77788888754 35888998
Q ss_pred cCceeeeeE--eecCC-CeeEecCCCcEEEEee-C--CeEEEEecccCCCCCeeeee----ecCCCCCceEEEECCC-Cc
Q 023822 151 RAEKCQGLL--RVQGR-PAAAYDDQGLVFAVAF-G--GYIRMFDARKYEKGPFDIFS----VGGDISDANVVKFSND-GR 219 (276)
Q Consensus 151 ~~~~~~~~~--~~~~~-~~~~~~~~~~~l~~~~-d--~~i~~~d~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~-~~ 219 (276)
.+.+-...- ..... ..++.-.++++++.|. + +.+.+||..+..= .... ..........+.+..+ ++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W---~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF---KDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE---EECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce---EEccCCCCCCCcccceeEEEEeCCCCE
Confidence 876543321 11111 1333324666666665 3 3789999876431 1111 1112222334565655 67
Q ss_pred EEEEeec--C-----CcEEEEECCCCcE-----EEEeecC-CCCCCceEEEEECCCCcEEEEecCCC
Q 023822 220 LMLLTTM--E-----GHIHVLDSFRGTL-----LSTYNVK-PVSRNSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 220 ~l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg 273 (276)
+++.|+. + +.+.+||+.+.+. -..+... ....... ++....++++++.||.++
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCS
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccC
Confidence 7777775 2 3588999988771 1222110 0011111 223334478888888653
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.49 E-value=1.7 Score=35.61 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=16.8
Q ss_pred CceEEEEECCCCcEEEEecCCC
Q 023822 252 NSTLEASFSPEGMFVISGRVSP 273 (276)
Q Consensus 252 ~~v~~~~~s~~g~~l~~~~~dg 273 (276)
.....|+|.|||.+.++.++.+
T Consensus 139 H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp SCEEEEEECTTSCEEEEECCTT
T ss_pred ccCCcEeECCCCcEEEEeCCCC
Confidence 3467899999998777766654
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.30 E-value=2.3 Score=39.96 Aligned_cols=129 Identities=9% Similarity=0.106 Sum_probs=79.0
Q ss_pred CCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCC
Q 023822 55 DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKD 134 (276)
Q Consensus 55 d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 134 (276)
..+|.|-|+.++..+.+.. -..-+.-.+|..+.++.-. ...+.++|+++...+....- +.+|.-=.|-...
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra----g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~- 117 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA----GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN- 117 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec----CCeEEEeehHHhhhhccccc-CCCceEEEecCCC-
Confidence 3478888988766442221 1223445677777666554 78999999998877666553 3455555665443
Q ss_pred EEEEeeCCCeEEEEeccCc-eeeeeEe------ecCCCeeEecCCCcEEEEee--------CCeEEEEecccCC
Q 023822 135 CFISGSLDRTVLLWDQRAE-KCQGLLR------VQGRPAAAYDDQGLVFAVAF--------GGYIRMFDARKYE 193 (276)
Q Consensus 135 ~l~~~~~d~~i~iwd~~~~-~~~~~~~------~~~~~~~~~~~~~~~l~~~~--------d~~i~~~d~~~~~ 193 (276)
.|+..+ +..|+.|++... .+.+.+. ...+..-..+++.++++..+ .|.+.+|..+...
T Consensus 118 ~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~ 190 (1630)
T 1xi4_A 118 TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (1630)
T ss_pred eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc
Confidence 344443 457999999742 3433331 22344456677777766433 3888999887644
No 351
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.68 E-value=2.3 Score=34.40 Aligned_cols=196 Identities=9% Similarity=0.076 Sum_probs=109.3
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccC-Ceeeeeeeee----eeceEEEEEeccCCeEEEeccC----CCCCceEEE
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTA-ATCLKTINSK----KYGVDLVCFTSHPTTVIYSSKN----GWDESLRLL 106 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~----~~d~~i~~~ 106 (276)
.|.-=.|-.+ +.|+..+ +..|+-|+++. ..+...+..| ...|.....+++.+.++..+-. ...|.+.+|
T Consensus 107 ~VvfWkWis~-~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 107 DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp CCCEEEEEET-TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred CceEEEecCC-CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 3433444332 3455443 35799999974 3455555544 3467788888888887755431 125788999
Q ss_pred EccCCceeeeecccCcceEEEEeccCC---CEEEEeeCC---CeEEEEeccCc---ee-----eeeE--eecC----CCe
Q 023822 107 SLHDNKYLRYFKGHHDRVVSLSLCSSK---DCFISGSLD---RTVLLWDQRAE---KC-----QGLL--RVQG----RPA 166 (276)
Q Consensus 107 d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d---~~i~iwd~~~~---~~-----~~~~--~~~~----~~~ 166 (276)
..+.+ ..+.+.+|......+.+..+. +.|+.+... +++++-++... .. ...+ .... ...
T Consensus 185 S~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPva 263 (494)
T 1bpo_A 185 SVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (494)
T ss_dssp ESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEE
T ss_pred ecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeE
Confidence 87654 456778888776665554222 245545443 78999998643 10 1111 1111 125
Q ss_pred eEecCCC-cEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCC
Q 023822 167 AAYDDQG-LVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 238 (276)
Q Consensus 167 ~~~~~~~-~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 238 (276)
+..++.. -+++...-|.|++||+.++.. ++...-...+|-..+-+....=++.....|.|.--.+...
T Consensus 264 mqvs~kygviyviTK~G~i~lyDleTgt~----i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTC----IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCE----EEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred EEecccCCEEEEEecCceEEEEeccccee----eeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 5666654 444555589999999999765 4443333334433333333223444445555555544443
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.96 E-value=3.1 Score=31.38 Aligned_cols=180 Identities=11% Similarity=0.035 Sum_probs=85.5
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceee
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~ 115 (276)
.|..++.... ..++. . ||.|+.|-......+..-......|..++.. ..+.+.. . ||.|+.|-......+-
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G--~~hs~~l-~---~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG--NYHSLAL-K---DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEEC--SSEEEEE-E---TTEEEEEECCTTSTTC
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeC--CCEEEEE-E---CCEEEEeeCCCCCCCC
Confidence 4666666543 23333 4 8889988755322111111112245555543 2333333 3 7788888654322111
Q ss_pred eecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEeeCCeEEEEecccCC
Q 023822 116 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYE 193 (276)
Q Consensus 116 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~ 193 (276)
.-..-...|..++.-.+ ..+.-. ||.|+.|-.......... ....+..++... ...++.. |+.++.|-.....
T Consensus 96 ~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~-~~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 96 VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGV-YTALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS-SEEEEEE-TTEEEEEECCTTS
T ss_pred CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEccc-CEEEEEE-CCEEEEecCCCCC
Confidence 11111345777766543 333344 899999976543221111 111222232222 2333333 7888888765433
Q ss_pred CCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 194 KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
...... .....|..++...+.. ++. .||.|+.|-..
T Consensus 171 qlg~p~----~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n 206 (282)
T 3qhy_B 171 QTTVPA----EAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDN 206 (282)
T ss_dssp TTSCCG----GGGSSEEEEEECSSEE-EEE--ETTEEEEEECC
T ss_pred CCCCce----ecCCCeEEEEecCCEE-EEE--ECCeEEEEECC
Confidence 211111 1123566666654433 333 58889988654
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.63 E-value=4.2 Score=32.22 Aligned_cols=211 Identities=8% Similarity=-0.006 Sum_probs=115.5
Q ss_pred CCcEEEEEEcCCCCEEE--Eeec-------------CCeEEEEEccCC--eeeeeeeee------eeceEEEEEe---cc
Q 023822 34 NGRISSMDFHKSSSYLV--TASD-------------DESIRLYDVTAA--TCLKTINSK------KYGVDLVCFT---SH 87 (276)
Q Consensus 34 ~~~v~~~~~~~~~~~l~--~~~~-------------d~~i~iwd~~~~--~~~~~~~~~------~~~v~~~~~~---~~ 87 (276)
--.|..+...+.+++-+ +|-. --.|.+||+.+. +.++++... ......+++. |+
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~ 165 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPK 165 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCC
Confidence 34677888877666433 2211 125889999999 888887643 3457788887 22
Q ss_pred ----CCeEEEeccCCCCCceEEEEccCCceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecC
Q 023822 88 ----PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG 163 (276)
Q Consensus 88 ----~~~l~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 163 (276)
+.++..+.. + ...|.++|+.+++.-+.+ |.. |.|+..... ..+|.-.-| ..+
T Consensus 166 ~~c~~~~aYItD~-~-~~gLIVydl~~~~swRv~--~~~------~~pd~~~~~--~i~G~~~~~------------~~G 221 (381)
T 3q6k_A 166 GDCSETFVYITNF-L-RGALFIYDHKKQDSWNVT--HPT------FKAERPTKF--DYGGKEYEF------------KAG 221 (381)
T ss_dssp TTSCSEEEEEEET-T-TTEEEEEETTTTEEEEEE--CGG------GSCCSCEEE--EETTEEEEE------------CCC
T ss_pred CCCCccEEEEEcC-C-CCcEEEEECCCCcEEEEc--cCC------CccccCcce--EECCEEeEe------------ccC
Confidence 334444443 2 788999999998876655 321 344411111 112321111 234
Q ss_pred CCeeEecCC----CcEEEEee--CCeEEEEecc---cCCC-CCeeeeeecCCCCCceEEEEC-CCCcEEEEeecCCcEEE
Q 023822 164 RPAAAYDDQ----GLVFAVAF--GGYIRMFDAR---KYEK-GPFDIFSVGGDISDANVVKFS-NDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 164 ~~~~~~~~~----~~~l~~~~--d~~i~~~d~~---~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~i 232 (276)
+..++++|+ ++.|.... ...++-...+ .... ..+...-..+....-..+++. .+|.++++--..+.|..
T Consensus 222 i~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~ 301 (381)
T 3q6k_A 222 IFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSC 301 (381)
T ss_dssp EEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEE
T ss_pred ceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEE
Confidence 567788876 55555555 2233333321 1111 111111111111233456775 67877777777889999
Q ss_pred EECCC-C---cEEEEeecCCCCCCceEEEEECCCCcEEEEe
Q 023822 233 LDSFR-G---TLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 233 ~d~~~-~---~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 269 (276)
|+..+ . +....+...+ .-..+..+.+.++|.+.+..
T Consensus 302 w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 302 WNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEE
Confidence 99765 1 2233333222 33467888888888765544
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=90.92 E-value=1.4 Score=37.19 Aligned_cols=59 Identities=22% Similarity=0.282 Sum_probs=42.8
Q ss_pred ceEEEECCCCcEEEEeecC------------CcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEe
Q 023822 209 ANVVKFSNDGRLMLLTTME------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 269 (276)
Q Consensus 209 i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 269 (276)
.-.|+|+|.|++++.-..+ +.+.+.+..+++....+.. .....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~--P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC--CTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC--CCCccCcCeeECCCCCEEEEE
Confidence 4569999999976664322 2466677777777665553 256789999999999988765
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.33 E-value=2.3 Score=38.39 Aligned_cols=39 Identities=31% Similarity=0.455 Sum_probs=33.8
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 73 (276)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 357778888888899999999999999999999888754
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=89.93 E-value=2.5 Score=35.46 Aligned_cols=62 Identities=21% Similarity=0.254 Sum_probs=43.6
Q ss_pred CCceEEEECCCCcEEEEeec------------CCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEEec
Q 023822 207 SDANVVKFSNDGRLMLLTTM------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGR 270 (276)
Q Consensus 207 ~~i~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 270 (276)
.....|.|+++|.+.+.... .+.|..++..++++...+.. .....++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--CTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--CCCccccCCEECCCCCEEEEEE
Confidence 34567999999987774321 12577777777877655542 1346799999999999887753
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.48 E-value=3.1 Score=37.48 Aligned_cols=69 Identities=16% Similarity=0.313 Sum_probs=45.9
Q ss_pred ceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeec-------CCCeeEecC-CCcEEEEee----CCeEEEEecc
Q 023822 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ-------GRPAAAYDD-QGLVFAVAF----GGYIRMFDAR 190 (276)
Q Consensus 123 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~-~~~~l~~~~----d~~i~~~d~~ 190 (276)
.+.+++..++..++++-+.|+++|+|++.+++++...... ........| .+.++.+-. +|..++|.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~ 316 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLN 316 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEe
Confidence 4667777788889999999999999999999988876221 111222333 233333322 5788888765
Q ss_pred c
Q 023822 191 K 191 (276)
Q Consensus 191 ~ 191 (276)
.
T Consensus 317 ~ 317 (950)
T 4gq2_M 317 A 317 (950)
T ss_dssp E
T ss_pred c
Confidence 4
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.32 E-value=8.1 Score=30.52 Aligned_cols=110 Identities=10% Similarity=-0.005 Sum_probs=54.2
Q ss_pred CCcEEEEEEcC-CCCEEEEeecCC----eEEEEEccCCeeeeeeee--------------eeeceEEEEEecc--CCeEE
Q 023822 34 NGRISSMDFHK-SSSYLVTASDDE----SIRLYDVTAATCLKTINS--------------KKYGVDLVCFTSH--PTTVI 92 (276)
Q Consensus 34 ~~~v~~~~~~~-~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~--------------~~~~v~~~~~~~~--~~~l~ 92 (276)
...|.+|++.| +...|..+...| .|...+ +.++.-..+.. ....|..+++.|. ...+.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35699999998 334454555444 344332 23322222211 1124778888863 45666
Q ss_pred EeccCCCCCceEEEEccCCceeeeecc-------------------cCcceEEEEeccC-CCEEEEeeCCCeEEEE
Q 023822 93 YSSKNGWDESLRLLSLHDNKYLRYFKG-------------------HHDRVVSLSLCSS-KDCFISGSLDRTVLLW 148 (276)
Q Consensus 93 ~~~~~~~d~~i~~~d~~~~~~~~~~~~-------------------~~~~i~~~~~~~~-~~~l~~~~~d~~i~iw 148 (276)
++.. .+.|...+ ..++.-..+.. ....+.+|.++|. ...+..+..++.|...
T Consensus 133 ~g~~---~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 133 AGTS---PQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEE---TTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEec---CCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 6654 55554442 12222111110 1235788999874 3445555545545443
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.18 E-value=14 Score=32.01 Aligned_cols=69 Identities=7% Similarity=0.073 Sum_probs=43.7
Q ss_pred ceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeEeecCCC---eeEecC---C-------CcEEEEee---CCeEEE
Q 023822 123 RVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP---AAAYDD---Q-------GLVFAVAF---GGYIRM 186 (276)
Q Consensus 123 ~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~---~-------~~~l~~~~---d~~i~~ 186 (276)
.|.++.+ +..++++-+.|.++|+|++++++++........+ .-...| . +.++++-. +|..++
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~ 300 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQM 300 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEE
Confidence 3555444 4679999999999999999999988777332111 001122 1 24444433 589999
Q ss_pred EecccCC
Q 023822 187 FDARKYE 193 (276)
Q Consensus 187 ~d~~~~~ 193 (276)
|.+....
T Consensus 301 ~~l~~~~ 307 (729)
T 3f7f_A 301 GTLLVDS 307 (729)
T ss_dssp EEEEC--
T ss_pred EEEEEcC
Confidence 9986544
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.95 E-value=1.8 Score=39.90 Aligned_cols=38 Identities=32% Similarity=0.463 Sum_probs=32.3
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeee
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTIN 73 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 73 (276)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566777788899999999999999999999988754
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.45 E-value=2.4 Score=39.14 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=32.6
Q ss_pred CceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEee
Q 023822 208 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 245 (276)
Q Consensus 208 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 245 (276)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556677788999999999999999999999988865
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.29 E-value=4.6 Score=34.92 Aligned_cols=37 Identities=22% Similarity=0.419 Sum_probs=30.1
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeee
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINS 74 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 74 (276)
.|.++.+ +..++++-+.|+++|+|++.+++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666555 367999999999999999999998877654
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=76.01 E-value=22 Score=26.60 Aligned_cols=154 Identities=9% Similarity=0.041 Sum_probs=81.4
Q ss_pred ceEEEEEeccCCeEEEeccCCCCCceEEE---EccCCceeeeecccCcceEEEEecc-CCCEEEEeeCCCeEEEEeccCc
Q 023822 78 GVDLVCFTSHPTTVIYSSKNGWDESLRLL---SLHDNKYLRYFKGHHDRVVSLSLCS-SKDCFISGSLDRTVLLWDQRAE 153 (276)
Q Consensus 78 ~v~~~~~~~~~~~l~~~~~~~~d~~i~~~---d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~ 153 (276)
.+..+.......+++..+. .|.++-- ++...+....+. ....|..+.... +...++..+.+|.++...+...
T Consensus 25 ~~~~~~~~~t~~~ll~fT~---~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSN---RGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CEEEEEEEETTSCEEEEET---TSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred eEEEEEEECCCCEEEEEcC---CCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 3444444444445555554 6665543 333221111132 344555554321 4678999999999999887653
Q ss_pred e------eeeeEe-ecCCCeeEe-cCCCcEEEEeeCCeEEEEecccCCC-----CCeeeeeecCCCCCceEEEECCCCcE
Q 023822 154 K------CQGLLR-VQGRPAAAY-DDQGLVFAVAFGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVKFSNDGRL 220 (276)
Q Consensus 154 ~------~~~~~~-~~~~~~~~~-~~~~~~l~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~ 220 (276)
. ....+. ...+..+.. +.+..+++.+..|.+..+....-.. .......+... ..+..+...+++.+
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d~vv~~~~~~~~~~ 179 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-DETSGLRIWNGEPY 179 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-CCEEEEEEESSCSE
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-CEEEEEEEeCCCCE
Confidence 2 111111 112222222 3445677777789888887643221 11112223222 34555554455667
Q ss_pred EEEeecCCcEEEEECC
Q 023822 221 MLLTTMEGHIHVLDSF 236 (276)
Q Consensus 221 l~~~~~dg~i~i~d~~ 236 (276)
++..+..|.++...+.
T Consensus 180 ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 180 LLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEEETTSCEEEEEGG
T ss_pred EEEEeCCCcEEEeEHH
Confidence 8888899998888764
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=73.24 E-value=27 Score=26.20 Aligned_cols=205 Identities=11% Similarity=0.075 Sum_probs=94.4
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEEccCCeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCCceee
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLR 115 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~~~~~ 115 (276)
.|..++...+- .++. . ||.|+.|-......+..-..-...|..++.... +.+... +|.|+.|-......+-
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~----~G~v~~wG~n~~gqlg 134 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK----DGKVIAWGDDSDGQTT 134 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE----TTEEEEEECCTTSTTS
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe----CCeEEEecCCCCCcCC
Confidence 45555554332 2333 3 788888865432111100001124555544322 222222 4667777544322111
Q ss_pred eecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceeeeeE--eecCCCeeEecCCCcEEEEeeCCeEEEEecccCC
Q 023822 116 YFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RVQGRPAAAYDDQGLVFAVAFGGYIRMFDARKYE 193 (276)
Q Consensus 116 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~d~~i~~~d~~~~~ 193 (276)
........|..++.-.+. .+.-. ||.|+.|-......+..- ....+..++.-. ...++. .++.++.|-.....
T Consensus 135 ~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~-~hs~al-~~G~v~~wG~n~~g 209 (282)
T 3qhy_B 135 VPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGI-FHSLAL-KDGKVIAWGDNRYK 209 (282)
T ss_dssp CCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECS-SEEEEE-ETTEEEEEECCTTS
T ss_pred CCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecC-CEEEEE-ECCeEEEEECCCCC
Confidence 111123456666554332 22233 799999976543221111 111222333322 334444 68999999765433
Q ss_pred CCCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECCCCcEEEEeecCCCCCCceEEEEECCCCcEEEE
Q 023822 194 KGPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 268 (276)
Q Consensus 194 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 268 (276)
...... .....|..++....... +.. ||.|+.|=.....++. ....|.+++-...-...++
T Consensus 210 qlg~p~----~~~~~v~~i~~G~~h~~-al~--~g~v~~wG~n~~gq~~-------v~~~v~~iaaG~~h~~al~ 270 (282)
T 3qhy_B 210 QTTVPT----EALSGVSAIASGEWYSL-ALK--NGKVIAWGSSRTAPSS-------VQSGVSSIEAGPNAAYALK 270 (282)
T ss_dssp TTCCCG----GGGSSCCEEEECSSCEE-EEE--TTEEEEESTTCCCCGG-------GSSCEEEEEECSSCEEEEE
T ss_pred CCCCCc----ccCCCceEEEcCCCEEE-EEE--CCEEEEecCCCCcccc-------CCCCcEEEEECcCeEEEEe
Confidence 211111 11235777776554433 333 8999999755433221 1235666666555444443
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=72.73 E-value=17 Score=30.81 Aligned_cols=60 Identities=12% Similarity=0.175 Sum_probs=41.2
Q ss_pred cEEEEEEcCCCCEEEEeecC------------CeEEEEEccCCeeeeeeeee-eeceEEEEEeccCCeEEEec
Q 023822 36 RISSMDFHKSSSYLVTASDD------------ESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSS 95 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 95 (276)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+.+..+ ..+++.++|+||++.|++..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 34668999999866654321 23556666667766555544 36799999999998887764
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.17 E-value=28 Score=26.04 Aligned_cols=195 Identities=9% Similarity=0.067 Sum_probs=102.5
Q ss_pred CcEEEEEEcCCCCEEEEeecCCeEEE---EEccCCeeeeeeeeeeeceEEEEEec--cCCeEEEeccCCCCCceEEEEcc
Q 023822 35 GRISSMDFHKSSSYLVTASDDESIRL---YDVTAATCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDESLRLLSLH 109 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~d~~i~i---wd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d~~i~~~d~~ 109 (276)
+.+..+.-......|+.-+.+|.++- |++..++....+. ....|..+.. + +...++.++. +|.++-..+.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~---~G~iKr~~l~ 98 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATK---KGYVKKIPLA 98 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEET---TSEEEEEEGG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeC---CCEEEEEEHH
Confidence 34555554444556666667787664 3333332211122 2345655544 4 4678888888 9999998875
Q ss_pred CCc------eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee-------e--eE-eecCCCee-EecCC
Q 023822 110 DNK------YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-------G--LL-RVQGRPAA-AYDDQ 172 (276)
Q Consensus 110 ~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-------~--~~-~~~~~~~~-~~~~~ 172 (276)
.-. ....++. .+.+..+........++..+..|.+..+....-... . .+ ....+..+ ...++
T Consensus 99 ~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~ 177 (276)
T 3no0_A 99 EFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGE 177 (276)
T ss_dssp GTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSC
T ss_pred HhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCC
Confidence 532 1222332 344555555555567888888999888875432111 1 11 11112222 23344
Q ss_pred CcEEEEeeCCeEEEEecccCCCCC---eeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEE--EECC
Q 023822 173 GLVFAVAFGGYIRMFDARKYEKGP---FDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHV--LDSF 236 (276)
Q Consensus 173 ~~~l~~~~d~~i~~~d~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i--~d~~ 236 (276)
..++..+..|.++...+....... .-...+ .....+..+....+...++..+.+|.+.. ++..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 456666668888888775433211 011112 22234444433333345666677777766 7654
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.17 E-value=31 Score=29.10 Aligned_cols=62 Identities=10% Similarity=0.166 Sum_probs=43.2
Q ss_pred CcEEEEEEcCCCCEEEEeec------------CCeEEEEEccCCeeeeeeeee-eeceEEEEEeccCCeEEEecc
Q 023822 35 GRISSMDFHKSSSYLVTASD------------DESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSK 96 (276)
Q Consensus 35 ~~v~~~~~~~~~~~l~~~~~------------d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~ 96 (276)
.....|.|.++|.+.++... ...+..++..+++....+... ...++.++|+||++.|+++..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 45677999999987773221 125666777677765555433 356899999999999888764
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=67.79 E-value=40 Score=26.01 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=86.0
Q ss_pred CcEEEEE-EcC--CCCEEEEeecCCeEEEEEccCCe-------eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceE
Q 023822 35 GRISSMD-FHK--SSSYLVTASDDESIRLYDVTAAT-------CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 104 (276)
Q Consensus 35 ~~v~~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 104 (276)
..|.++. ... +..+++..+.+|.++.-.+.... ....+.. ...+..+........++..+. .|.+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~---~G~~~ 170 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSA---NGQSI 170 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEET---TSEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEEC---CCeEE
Confidence 4455543 332 57789999999999998876422 2222332 234555555555667777776 88888
Q ss_pred EEEcc--CCc---------eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee-------eeEee----c
Q 023822 105 LLSLH--DNK---------YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-------GLLRV----Q 162 (276)
Q Consensus 105 ~~d~~--~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~~----~ 162 (276)
.+... .-. ..-.+. ....|.++...+++..++..+..|.++.-.+...... ..+.. .
T Consensus 171 rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d 249 (327)
T 3uc1_A 171 RFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRG 249 (327)
T ss_dssp EEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTC
T ss_pred EEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCC
Confidence 88766 211 111222 2345666666566668889999999988876533221 11111 1
Q ss_pred CCC-eeEecCCCcEEEEeeCCeEEEEeccc
Q 023822 163 GRP-AAAYDDQGLVFAVAFGGYIRMFDARK 191 (276)
Q Consensus 163 ~~~-~~~~~~~~~~l~~~~d~~i~~~d~~~ 191 (276)
.+. .....++..+++.+.+|.+..++...
T Consensus 250 ~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 250 RLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp SEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred eEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 111 12223444566666666666665543
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=65.71 E-value=44 Score=25.76 Aligned_cols=233 Identities=9% Similarity=0.046 Sum_probs=110.4
Q ss_pred cEEEEEEcCCCCEEEEeecCCeEEEEE---ccC------Ceeeeee-e-eeeeceEEEEEec---cCCeEEEeccCCCCC
Q 023822 36 RISSMDFHKSSSYLVTASDDESIRLYD---VTA------ATCLKTI-N-SKKYGVDLVCFTS---HPTTVIYSSKNGWDE 101 (276)
Q Consensus 36 ~v~~~~~~~~~~~l~~~~~d~~i~iwd---~~~------~~~~~~~-~-~~~~~v~~~~~~~---~~~~l~~~~~~~~d~ 101 (276)
.+..+........|+.-+..|.++-.. +.. |.++..+ . .....|..+...+ +...++.++. +|
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~---~G 119 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATR---NG 119 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEET---TS
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcC---CC
Confidence 344444444445566556677665444 322 2222111 1 1123455544433 4678888888 99
Q ss_pred ceEEEEccCCc-------eeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEecc--Cceee---------eeE-eec
Q 023822 102 SLRLLSLHDNK-------YLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR--AEKCQ---------GLL-RVQ 162 (276)
Q Consensus 102 ~i~~~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~--~~~~~---------~~~-~~~ 162 (276)
.++--.+..-. ....++. .+.+..+........++..+..|.+..+... .-... ..+ ...
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d 198 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDD 198 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTC
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCC
Confidence 99988865422 1123333 3445555454555678888889998887766 21111 111 111
Q ss_pred CCCeeEe-cCCCcEEEEeeCCeEEEEecccCCC-----CCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 163 GRPAAAY-DDQGLVFAVAFGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 163 ~~~~~~~-~~~~~~l~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
.+..+.. .++..++.++..|.++.-.+..... .......+......+..+....+...++..+.+|.+..++..
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 2223333 3444566666688888887654321 112222222212334444433344556666777777777654
Q ss_pred CCcE-------EEEeecCCCCCCceEEEEECCC-CcEEEEecCCCC
Q 023822 237 RGTL-------LSTYNVKPVSRNSTLEASFSPE-GMFVISGRVSPF 274 (276)
Q Consensus 237 ~~~~-------~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~ 274 (276)
.-.. +..+.. .....|.++...+. ...+.+.+++|+
T Consensus 279 ~i~~~gR~a~GV~~i~l--~~~d~vv~~~~~~~~~~~~~~~~~~g~ 322 (327)
T 3uc1_A 279 QVRKAGRQTKGVRLMNL--GEGDTLLAIARNAEESGDDNAVDANGA 322 (327)
T ss_dssp GSCBCCTTSCCEECTTC--CTTCCEEEEEECC--------------
T ss_pred hccccCCCCCCeEeEec--CCCCEEEEEEEcCCCcceEEEEecCCc
Confidence 3211 222221 13456666666543 455777777764
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=62.12 E-value=55 Score=25.65 Aligned_cols=206 Identities=7% Similarity=-0.022 Sum_probs=93.9
Q ss_pred CEEEEeecCCeEEEEEccC-Ceeeeee--eeeeeceEEEEEec-cCCeEEEeccCCCCC----ceEEEEccCCceeeeec
Q 023822 47 SYLVTASDDESIRLYDVTA-ATCLKTI--NSKKYGVDLVCFTS-HPTTVIYSSKNGWDE----SLRLLSLHDNKYLRYFK 118 (276)
Q Consensus 47 ~~l~~~~~d~~i~iwd~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~----~i~~~d~~~~~~~~~~~ 118 (276)
..|..+...| +.+++... ++....+ ......|.++++.| +...+.++.. .+ .|...+ ..++.-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~---~g~~g~gl~~s~-D~G~tW~~~~ 97 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAAR---TGHLGPTVFRSD-DGGGNWTEAT 97 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEE---C--CCEEEEEES-STTSCCEECS
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEec---CCCCCccEEEeC-CCCCCceECC
Confidence 4677777766 55555432 2222221 12234689999998 3444555554 33 343332 2222211111
Q ss_pred ------c--------cCcceEEEEeccC--CCEEEEeeCCCeEEEEeccCc--eeeeeE------------------eec
Q 023822 119 ------G--------HHDRVVSLSLCSS--KDCFISGSLDRTVLLWDQRAE--KCQGLL------------------RVQ 162 (276)
Q Consensus 119 ------~--------~~~~i~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~--~~~~~~------------------~~~ 162 (276)
. ....|.++++.|. ...+..+...+.|...+-... +.+... ...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCC
Confidence 0 1125778888872 455666666666655532211 111110 001
Q ss_pred CCCeeEecCC--CcEEEEeeCCeEEEEecccCCCCCeeeee-ecCC---------CCCceEEEECCC-CcEEEEeecCCc
Q 023822 163 GRPAAAYDDQ--GLVFAVAFGGYIRMFDARKYEKGPFDIFS-VGGD---------ISDANVVKFSND-GRLMLLTTMEGH 229 (276)
Q Consensus 163 ~~~~~~~~~~--~~~l~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~---------~~~i~~~~~~~~-~~~l~~~~~dg~ 229 (276)
.+..+.++|. +.++++..++.|...+-.. +. -..... .... ...+.+++++|. ...|+++...+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG-~t-W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTDAG-TD-WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESSTT-SS-CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECCCC-CC-ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 2346778773 4555555555444433211 11 100100 0000 124788999986 35566665544
Q ss_pred EEEEECCCCcEEEEeecCCCC--CCceEEEEECC
Q 023822 230 IHVLDSFRGTLLSTYNVKPVS--RNSTLEASFSP 261 (276)
Q Consensus 230 i~i~d~~~~~~~~~~~~~~~~--~~~v~~~~~s~ 261 (276)
|...+ ..++.-..+...... ...+..++++|
T Consensus 255 l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p 287 (394)
T 3b7f_A 255 IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQ 287 (394)
T ss_dssp EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECS
T ss_pred EEEeC-CCCCcceECCCCCCCCCccceEEEEECC
Confidence 54444 334443333210001 13456778876
No 371
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=60.24 E-value=56 Score=25.11 Aligned_cols=188 Identities=10% Similarity=0.095 Sum_probs=101.0
Q ss_pred CCCCEEEEeecCCeEEEEEccCCe----eeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC---------
Q 023822 44 KSSSYLVTASDDESIRLYDVTAAT----CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD--------- 110 (276)
Q Consensus 44 ~~~~~l~~~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~--------- 110 (276)
|+...+++.+.+|.|+--.+...+ ....+... ..+..+........++..+. .|.++-+....
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~---~Gr~~~~~~~elp~~~r~a~ 78 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTN---KGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEET---TSEEEEEEGGGSCBCCTTSC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEEC---CCEEEEEEHHHCcCCCCCCC
Confidence 566778888999999877654211 11122222 23444445555666666666 77766665421
Q ss_pred Cceeee---ecccCcceEEEE-ecc--CCCEEEEeeCCCeEEEEeccCceeee--------eEe-ecCCCee-EecCCCc
Q 023822 111 NKYLRY---FKGHHDRVVSLS-LCS--SKDCFISGSLDRTVLLWDQRAEKCQG--------LLR-VQGRPAA-AYDDQGL 174 (276)
Q Consensus 111 ~~~~~~---~~~~~~~i~~~~-~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~--------~~~-~~~~~~~-~~~~~~~ 174 (276)
|.++.. +. ....|..+. ..+ ++.+++.++.+|.++.-.+....... .+. ...+..+ ...++..
T Consensus 79 G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~ 157 (323)
T 1wp5_A 79 GQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNE 157 (323)
T ss_dssp CEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSE
T ss_pred CcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCE
Confidence 222111 22 223455543 332 25678999999999998875322211 111 1122222 2345567
Q ss_pred EEEEeeCCeEEEEecccCCC-----CCeeeeeecCCCCCceEEEECCCCc-EEEEeecCCcEEEEECCC
Q 023822 175 VFAVAFGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR 237 (276)
Q Consensus 175 ~l~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~ 237 (276)
+++.+.+|.+..+....-.. .......+.. ...|.++..-+++. .+++.+..|..+..++..
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 77777789988887754221 1122222322 23455554433344 678888888888777643
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=58.69 E-value=58 Score=24.82 Aligned_cols=187 Identities=9% Similarity=0.036 Sum_probs=103.7
Q ss_pred CCCCEEEEeecCCeEEEEEccCCeee---------eeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccCC---
Q 023822 44 KSSSYLVTASDDESIRLYDVTAATCL---------KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN--- 111 (276)
Q Consensus 44 ~~~~~l~~~~~d~~i~iwd~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~~--- 111 (276)
++..++++.+.+|.|+--.+..-+.. ..+.. ...+..+........++..+. .|.++-+....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~---~G~~~~~~~~~ip~~ 81 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISN---EGKLYLINAYEIKDS 81 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEET---TSEEEEEEGGGSCC-
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEEC---CCeEEEEEHHHCCCC
Confidence 45677888899999988776533211 11122 233445555555666777666 777776665321
Q ss_pred ------ce---eeeecccCcceEEEEecc---CCCEEEEeeCCCeEEEEeccCceee-------eeEee-cCCCe-eEec
Q 023822 112 ------KY---LRYFKGHHDRVVSLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQ-------GLLRV-QGRPA-AAYD 170 (276)
Q Consensus 112 ------~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~~-~~~~~-~~~~ 170 (276)
.+ .-.+. ....|..+...+ +..+++..+..|.++.-.+...... ..+.. ..+.. ....
T Consensus 82 ~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~ 160 (312)
T 1suu_A 82 SRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVF 160 (312)
T ss_dssp ------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEEC
T ss_pred CccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeC
Confidence 11 11122 223444443332 4567888899999998877543211 11111 11222 2234
Q ss_pred CCCcEEEEeeCCeEEEEecccCCC-----CCeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 171 DQGLVFAVAFGGYIRMFDARKYEK-----GPFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 171 ~~~~~l~~~~d~~i~~~d~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
++..+++.+.+|.+..+....-.. .......+.. ...+..+..-+++..+++.+..|..+..++.
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 566677777789999888765211 1122223322 3345565555556678888899998888874
No 373
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=58.24 E-value=68 Score=25.42 Aligned_cols=114 Identities=11% Similarity=0.247 Sum_probs=68.1
Q ss_pred CCcEEEEEEc---CC----CCEEEEe-ecCCeEEEEEccCCeeeeeee----e----------e----eeceEEEEEecc
Q 023822 34 NGRISSMDFH---KS----SSYLVTA-SDDESIRLYDVTAATCLKTIN----S----------K----KYGVDLVCFTSH 87 (276)
Q Consensus 34 ~~~v~~~~~~---~~----~~~l~~~-~~d~~i~iwd~~~~~~~~~~~----~----------~----~~~v~~~~~~~~ 87 (276)
...+..+++. |+ +.+...+ +..+-|.|+|+.+++..+.+. . . ...+..++++|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 3567777777 22 2333333 346789999999887655442 0 0 136778888887
Q ss_pred ----CCeEEEeccCCCCCceEEEEccC-----Cc---eeeeecccC---cceEEEEec-cCCCEEEEeeCCCeEEEEecc
Q 023822 88 ----PTTVIYSSKNGWDESLRLLSLHD-----NK---YLRYFKGHH---DRVVSLSLC-SSKDCFISGSLDRTVLLWDQR 151 (276)
Q Consensus 88 ----~~~l~~~~~~~~d~~i~~~d~~~-----~~---~~~~~~~~~---~~i~~~~~~-~~~~~l~~~~~d~~i~iwd~~ 151 (276)
++.|..... ..-++|.+.+ .. .++.+ +.. ..-..++.. .+|.++++--....|..|+..
T Consensus 231 ~~~~~~~LYf~pl----ss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 231 DSEGNRPAYYLAG----SAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp CTTSCCEEEEEES----SCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETT
T ss_pred cCCCCeEEEEEEC----CCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC
Confidence 677777764 2234444332 11 11222 122 233456675 578778888888899999987
Q ss_pred C
Q 023822 152 A 152 (276)
Q Consensus 152 ~ 152 (276)
+
T Consensus 306 ~ 306 (381)
T 3q6k_A 306 K 306 (381)
T ss_dssp S
T ss_pred C
Confidence 6
No 374
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=57.98 E-value=99 Score=27.25 Aligned_cols=61 Identities=13% Similarity=0.233 Sum_probs=37.3
Q ss_pred CCcEEEEEEcCC-CCEEEEeecCCeEEEEEccCCeeeeeeee-------eeeceEEEEEeccC-CeEEEec
Q 023822 34 NGRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKTINS-------KKYGVDLVCFTSHP-TTVIYSS 95 (276)
Q Consensus 34 ~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~-~~l~~~~ 95 (276)
.+.|.+|+++|. ...++.+...+.|...+ +.|+.-..+.. ....+..+++.|.. ..++++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 468999999995 45666677667666554 33433333322 12368999998843 4444443
No 375
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.02 E-value=83 Score=23.98 Aligned_cols=182 Identities=12% Similarity=0.110 Sum_probs=95.7
Q ss_pred ccCCeEEEeccCCCCCceEEEEccCCcee---------eeecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCceee
Q 023822 86 SHPTTVIYSSKNGWDESLRLLSLHDNKYL---------RYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ 156 (276)
Q Consensus 86 ~~~~~l~~~~~~~~d~~i~~~d~~~~~~~---------~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 156 (276)
++...+++.+. +|.|+--.+..-+.. ..++. .+.+..+........++..+..|.++-.....-...
T Consensus 6 ~~e~~~v~~T~---~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~ 81 (312)
T 1suu_A 6 QKENIVVMLTK---KGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDS 81 (312)
T ss_dssp --CEEEEEEET---TCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-
T ss_pred CCCCEEEEEeC---CCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 45566777777 888887776533211 11222 233444444445566777788888776654321110
Q ss_pred ---------e-e--E-eecCCCee-Ee---cCCCcEEEEeeCCeEEEEecccCCC---CCeeeeeecCCCCCceEEEECC
Q 023822 157 ---------G-L--L-RVQGRPAA-AY---DDQGLVFAVAFGGYIRMFDARKYEK---GPFDIFSVGGDISDANVVKFSN 216 (276)
Q Consensus 157 ---------~-~--~-~~~~~~~~-~~---~~~~~~l~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~~i~~~~~~~ 216 (276)
. . + ....+..+ .. .++..++.++..|.++...+..... .......+.. ...+..+....
T Consensus 82 ~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~ 160 (312)
T 1suu_A 82 SRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF 160 (312)
T ss_dssp ------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC
T ss_pred CccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC
Confidence 0 0 1 11111122 12 1344566666689999888765432 1222233333 34555555544
Q ss_pred CCcEEEEeecCCcEEEEECCCC-------cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 217 DGRLMLLTTMEGHIHVLDSFRG-------TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 217 ~~~~l~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
....++..+.+|.+..+....- +-+..+.. .....|.++..-.++..|++.+.+|.
T Consensus 161 ~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L--~~~d~vv~~~~v~~~~~l~~vt~~G~ 223 (312)
T 1suu_A 161 KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL--KEGDLFVKVLSVKENPYLLIVSENGY 223 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC--CTTCCEEEEEECTTCSEEEEEETTSE
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe--CCCCEEEEEEEECCCCeEEEEECCCc
Confidence 4566888889999888876431 11222221 12455666665555666767776664
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=49.87 E-value=71 Score=26.37 Aligned_cols=28 Identities=7% Similarity=0.250 Sum_probs=23.5
Q ss_pred CCCCceEEEECCCCcEEEEeecCCcEEE
Q 023822 205 DISDANVVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 205 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i 232 (276)
...+|..+.++++..+|++++.++.++|
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4578999999999999999998876654
No 377
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=47.81 E-value=1e+02 Score=24.30 Aligned_cols=147 Identities=12% Similarity=0.043 Sum_probs=78.7
Q ss_pred eccCCeEEEeccCCCCCceEEEEccCC---------ceeeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEe---ccC
Q 023822 85 TSHPTTVIYSSKNGWDESLRLLSLHDN---------KYLRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWD---QRA 152 (276)
Q Consensus 85 ~~~~~~l~~~~~~~~d~~i~~~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd---~~~ 152 (276)
-|+...+++.+. +|.|+--.+..- .....++ ..+.+..+........++..+..|.++-+. ++.
T Consensus 4 I~~e~~~v~lT~---~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~ 79 (370)
T 3l6v_A 4 IAPEDVVVTLSH---AGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPE 79 (370)
T ss_dssp CCCCCEEEEEES---SCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred ccCCCEEEEEeC---CCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcC
Confidence 356778888888 888887655321 1222333 244555555555556677777788766554 322
Q ss_pred ------ceeeeeE-e---ecCCCee-Ee---cCCCcEEEEeeCCeEEEEecccCCC---CCeeeeeecCCCCCceEEEEC
Q 023822 153 ------EKCQGLL-R---VQGRPAA-AY---DDQGLVFAVAFGGYIRMFDARKYEK---GPFDIFSVGGDISDANVVKFS 215 (276)
Q Consensus 153 ------~~~~~~~-~---~~~~~~~-~~---~~~~~~l~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~~i~~~~~~ 215 (276)
+..+..+ . ...+..+ .+ .++..++.++..|.++...+..... .......+.. ...+..+...
T Consensus 80 ~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~ 158 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALT 158 (370)
T ss_dssp CCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEE
T ss_pred CCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEe
Confidence 1221111 1 1122222 22 2333566666689999888765432 1222233332 2344444444
Q ss_pred CCCcEEEEeecCCcEEEEECC
Q 023822 216 NDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 216 ~~~~~l~~~~~dg~i~i~d~~ 236 (276)
.....++..+.+|.+..++..
T Consensus 159 ~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 159 DGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CSCCEEEEEETTSEEEEEEGG
T ss_pred CCCceEEEEeCCCeEEEEEcc
Confidence 445567777888887777653
No 378
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=44.99 E-value=48 Score=27.72 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=35.2
Q ss_pred cEEEEee-CCeEEEEecccCCCC--CeeeeeecCCCCCce-EEEECCCCcEEEEeecCCcEEE
Q 023822 174 LVFAVAF-GGYIRMFDARKYEKG--PFDIFSVGGDISDAN-VVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 174 ~~l~~~~-d~~i~~~d~~~~~~~--~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~i 232 (276)
.++..|+ +|.|.-..+...... .+....+.....+|. .+.+++++.+|++++.++.++|
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3444455 677766555432211 122223333346785 8999999999999987765544
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=43.08 E-value=57 Score=26.92 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=34.9
Q ss_pred EEEEeecCCcEEEEECC-CC-------cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 220 LMLLTTMEGHIHVLDSF-RG-------TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 220 ~l~~~~~dg~i~i~d~~-~~-------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
.++.|+.+|.|.-.-+. .+ ..+..+...+ ...+|..+.++++..+|++++.++.
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~-~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFR-EPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSS-SCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecC-CCCccceEEEcCCCCEEEEEECCeE
Confidence 46678888876544332 21 1233333221 3578999999999999999998875
No 380
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.50 E-value=1.7e+02 Score=25.46 Aligned_cols=110 Identities=7% Similarity=0.054 Sum_probs=59.3
Q ss_pred EEE-eccCCCEEEEe-eCCC----eEEEEeccCceeeeeE-e-ecCC--------CeeEecCCCcEEEEee---------
Q 023822 126 SLS-LCSSKDCFISG-SLDR----TVLLWDQRAEKCQGLL-R-VQGR--------PAAAYDDQGLVFAVAF--------- 180 (276)
Q Consensus 126 ~~~-~~~~~~~l~~~-~~d~----~i~iwd~~~~~~~~~~-~-~~~~--------~~~~~~~~~~~l~~~~--------- 180 (276)
.+. ++|++++++.+ +..| .++++|+.+++.+..- . .... ..++|.+++.++++..
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 344 78888865543 3333 6999999999876532 2 1101 3447765556655431
Q ss_pred --CCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcE-----EEEee---cCCcEEEEECC
Q 023822 181 --GGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRL-----MLLTT---MEGHIHVLDSF 236 (276)
Q Consensus 181 --d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----l~~~~---~dg~i~i~d~~ 236 (276)
...++.|.+-+....-..++...... -......++++++ +++.+ ....+.+.+..
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 277 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEY-IYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTK 277 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTS-CEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECS
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCc-eEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCC
Confidence 25688888776543333344433322 1234555666652 34333 22456666654
No 381
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=41.14 E-value=1.8e+02 Score=25.33 Aligned_cols=106 Identities=12% Similarity=0.161 Sum_probs=54.5
Q ss_pred CcEEEEEEcCC-CCEEEEeecCCeEEEEEccCCeeeeeeeee-------eeceEEEEEecc-CCeEEEeccCC---C-CC
Q 023822 35 GRISSMDFHKS-SSYLVTASDDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTSH-PTTVIYSSKNG---W-DE 101 (276)
Q Consensus 35 ~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~-~~~l~~~~~~~---~-d~ 101 (276)
+.|..|+++|. ...++.+...+.|...+ +.++.-..+..+ ...+..+++.|. ...++++.... + .+
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 37999999995 35566666566666554 233332322211 245889999984 34555543200 0 01
Q ss_pred ceEEEEccC-Cceeeeec-cc--------CcceEEEEeccCC-CEEEEeeC
Q 023822 102 SLRLLSLHD-NKYLRYFK-GH--------HDRVVSLSLCSSK-DCFISGSL 141 (276)
Q Consensus 102 ~i~~~d~~~-~~~~~~~~-~~--------~~~i~~~~~~~~~-~~l~~~~~ 141 (276)
...+|.-.. ++.-..+. .. ...+..|+++|.. +.++.+..
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 345555433 32211111 11 0124678888853 45666653
No 382
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=40.19 E-value=1e+02 Score=26.60 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=22.4
Q ss_pred CCCCceEEEECCCC--cEEEEeecCCcEEE
Q 023822 205 DISDANVVKFSNDG--RLMLLTTMEGHIHV 232 (276)
Q Consensus 205 ~~~~i~~~~~~~~~--~~l~~~~~dg~i~i 232 (276)
...+|..+.++++. .+|++++.++.+++
T Consensus 448 ~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 448 DFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp TCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred CCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 45688999999988 89999888775554
No 383
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=39.87 E-value=1.1e+02 Score=26.40 Aligned_cols=30 Identities=7% Similarity=0.165 Sum_probs=24.4
Q ss_pred cCCCCCceEEEECCCCcEEEEeecCCcEEE
Q 023822 203 GGDISDANVVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 203 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 232 (276)
.....+|..+.++++..+|++++.++.++|
T Consensus 466 ~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 466 FREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred cCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 345678999999999999999988876554
No 384
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=38.01 E-value=1.3e+02 Score=22.81 Aligned_cols=187 Identities=9% Similarity=0.020 Sum_probs=99.4
Q ss_pred CCCCEEEEeecCCeEEEEEccCCeeee---------eeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc---C-
Q 023822 44 KSSSYLVTASDDESIRLYDVTAATCLK---------TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH---D- 110 (276)
Q Consensus 44 ~~~~~l~~~~~d~~i~iwd~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~---~- 110 (276)
|+...+++.+.+|.|+--.+...+... .++. ...+..+........++..+. .|.++-+... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~---~G~~~~~~~~elp~~ 76 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSS---RGRVYSMKVYQLPEA 76 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEET---TSEEEEEEGGGSCCC
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEEC---CCEEEEEEhhHCcCC
Confidence 355678888899999877664322111 1222 223444444555566666666 7776666542 1
Q ss_pred -----Cceee---eecccCcceEEEEec---cCCCEEEEeeCCCeEEEEeccCceee-------eeEe-ecCCCe-eEec
Q 023822 111 -----NKYLR---YFKGHHDRVVSLSLC---SSKDCFISGSLDRTVLLWDQRAEKCQ-------GLLR-VQGRPA-AAYD 170 (276)
Q Consensus 111 -----~~~~~---~~~~~~~~i~~~~~~---~~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~-~~~~~~-~~~~ 170 (276)
|.++. .+. ....|..+..- +++.+++..+.+|.++.-.+...... ..+. ...+.. ....
T Consensus 77 ~~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~ 155 (307)
T 1zi0_A 77 TRGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTS 155 (307)
T ss_dssp CSSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CCCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeC
Confidence 22211 122 23345555332 34567889999999999876532111 1111 111212 2334
Q ss_pred CCCcEEEEeeCCeEEEEecccCCCC-----CeeeeeecCCCCCceEEEECCCCcEEEEeecCCcEEEEECC
Q 023822 171 DQGLVFAVAFGGYIRMFDARKYEKG-----PFDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 236 (276)
Q Consensus 171 ~~~~~l~~~~d~~i~~~d~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 236 (276)
.+..+++.+.+|.+..++...-... ......+. ....|.++...+++..+++.+..|.++-.++.
T Consensus 156 ~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 156 GEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 5567777777898888876542211 11122222 22345555544555678888899998888763
No 385
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=37.81 E-value=1.4e+02 Score=24.93 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=34.8
Q ss_pred EEEEee-CCeEEEEecc-cCCCCCeeeeeecCCCCCc-eEEEECCCCcEEEEeecCCcEEE
Q 023822 175 VFAVAF-GGYIRMFDAR-KYEKGPFDIFSVGGDISDA-NVVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 175 ~l~~~~-d~~i~~~d~~-~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i 232 (276)
++..|+ +|.|.-.-+. ......+....+ ....+| ..+.++++..+|++++.++.+++
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 444455 6877654443 222222333334 345577 48999999999999988876665
No 386
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=36.05 E-value=97 Score=26.74 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=34.9
Q ss_pred EEEEeecCCcEE-EEECCCCc-------EEEEeecCCCCCCceEEEEECCCCcEEEEecCCCCC
Q 023822 220 LMLLTTMEGHIH-VLDSFRGT-------LLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 220 ~l~~~~~dg~i~-i~d~~~~~-------~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v 275 (276)
.++.|+.+|.|. +.....+. .+.++... ....+|..+.++++..+|++++.++.+
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~-~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECS-SSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeec-CCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 466788888764 33222211 23333322 246789999999999999999887753
No 387
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.39 E-value=1.2e+02 Score=25.66 Aligned_cols=28 Identities=7% Similarity=0.122 Sum_probs=22.4
Q ss_pred CCCCceEEEECCCCcEEEEeecCCcEEE
Q 023822 205 DISDANVVKFSNDGRLMLLTTMEGHIHV 232 (276)
Q Consensus 205 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i 232 (276)
...+|..+.++++...|++++.++.+++
T Consensus 417 ~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 417 RAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp SCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred CCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4568999999999889998887765554
No 388
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=35.06 E-value=1.4e+02 Score=25.70 Aligned_cols=54 Identities=17% Similarity=0.202 Sum_probs=35.1
Q ss_pred EEEEeecCCcEEEE-ECCCCc-EEEEeecCCCCCCceEEEEECCCC--cEEEEecCCCC
Q 023822 220 LMLLTTMEGHIHVL-DSFRGT-LLSTYNVKPVSRNSTLEASFSPEG--MFVISGRVSPF 274 (276)
Q Consensus 220 ~l~~~~~dg~i~i~-d~~~~~-~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~dg~ 274 (276)
.++.|+.+|.|.-. ...... .+..+... ....+|..+.++++. .+|++++.++.
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~-~~~~pI~~l~l~~~~~~~~Lyv~s~~~V 474 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLF-QDFEPVQTLLLSSKKGNRFVYAGSNSGV 474 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECC-TTCCCCCEEEECCSSSSCEEEEECSSCE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEeccc-CCCCcceeeEeccCCCccEEEEEEcCeE
Confidence 57778888876433 333322 23333322 245788899999988 89999888764
No 389
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=34.14 E-value=56 Score=27.31 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=40.1
Q ss_pred ceEEEECCCC--cEEEEeecCCcEEEEECCCC----cEEEEeecCCCCCCceE-EEEECCCCcEEEEecCCCC
Q 023822 209 ANVVKFSNDG--RLMLLTTMEGHIHVLDSFRG----TLLSTYNVKPVSRNSTL-EASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 209 i~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~ 274 (276)
+++++....+ ..++.|+.+|.|.-..+... ..+..+...+ ...+|. .+.+++++.+|++++.++.
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-~~~pv~~~l~~~~~~~~Lyv~s~~~V 473 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQV 473 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-CCCccccceEEccCCCeEEEEecccc
Confidence 3444444322 45677888998765544322 2334443221 246775 8999999999999988764
No 390
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=32.91 E-value=90 Score=19.42 Aligned_cols=24 Identities=8% Similarity=-0.104 Sum_probs=13.1
Q ss_pred eeEecCCCcEEEEeeCCeEEEEecc
Q 023822 166 AAAYDDQGLVFAVAFGGYIRMFDAR 190 (276)
Q Consensus 166 ~~~~~~~~~~l~~~~d~~i~~~d~~ 190 (276)
.+.+..+|.+++...++.+ +|...
T Consensus 60 ~l~l~~dGNLVl~d~~~~~-iW~S~ 83 (113)
T 3mez_B 60 FMRLGHSGELDITDDRLNT-VFVSN 83 (113)
T ss_dssp EEEECTTSCEEEECTTSCE-EEECS
T ss_pred EEEEeCCCcEEEECCCCCE-EEECC
Confidence 4566666666665444433 56543
No 391
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=31.85 E-value=2.4e+02 Score=23.93 Aligned_cols=57 Identities=12% Similarity=0.067 Sum_probs=35.7
Q ss_pred ceEEEEccCCceeeeec--------ccCcceEEEEeccCCC-EEEEeeCCCe----------------------------
Q 023822 102 SLRLLSLHDNKYLRYFK--------GHHDRVVSLSLCSSKD-CFISGSLDRT---------------------------- 144 (276)
Q Consensus 102 ~i~~~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~~-~l~~~~~d~~---------------------------- 144 (276)
.|.+|++. ++.+..+. .|...+....|.-||+ -++....+|+
T Consensus 152 ~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEy 230 (591)
T 2zux_A 152 LIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEY 230 (591)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCE
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcE
Confidence 45566664 44444332 1444566777777776 4666655554
Q ss_pred EEEEeccCceeeeeE
Q 023822 145 VLLWDQRAEKCQGLL 159 (276)
Q Consensus 145 i~iwd~~~~~~~~~~ 159 (276)
|.++|=.+++.+..+
T Consensus 231 L~vfdG~TG~~l~~~ 245 (591)
T 2zux_A 231 LTVFQGSTGKELVTA 245 (591)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEeCCCCCEEecc
Confidence 788888888877766
No 392
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=31.56 E-value=1.4e+02 Score=25.34 Aligned_cols=55 Identities=15% Similarity=0.030 Sum_probs=34.7
Q ss_pred cEEEEeecCCcEEEEECC-CC-----cEEEEeecCCCCCCceEEEEECCCCcEEEEecCCCC
Q 023822 219 RLMLLTTMEGHIHVLDSF-RG-----TLLSTYNVKPVSRNSTLEASFSPEGMFVISGRVSPF 274 (276)
Q Consensus 219 ~~l~~~~~dg~i~i~d~~-~~-----~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 274 (276)
..++.|+.+|.|.-.-.. ++ -.+..+... ....+|..+.++++...|+.++.++.
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~-~~~~pi~~L~ls~~~~~LyV~s~~~V 441 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPF-RRAAAIQTMSLDAERRKLYVSSQWEV 441 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCC-SSCCCCCEEEEETTTTEEEEECSSEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeecc-CCCCceeeEEEcCCCCEEEEEecceE
Confidence 356678888887643332 22 112223211 13567899999999999999887764
No 393
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=30.86 E-value=94 Score=19.03 Aligned_cols=46 Identities=13% Similarity=0.276 Sum_probs=22.3
Q ss_pred eeEecCCCcEEEEeeCCeEEEEecccCCCCCeeeeeecCCCCCceEEEECCCCcEEEEe
Q 023822 166 AAAYDDQGLVFAVAFGGYIRMFDARKYEKGPFDIFSVGGDISDANVVKFSNDGRLMLLT 224 (276)
Q Consensus 166 ~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 224 (276)
.+.+..+|.++....++. .+|...+.. ......+.+.++|.+++.+
T Consensus 54 ~L~l~~dGnLvL~d~~~~-~vWss~t~~------------~~~~~~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSSGR-SLWASHSTR------------GSGNYILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEECTTCC-EEEECCCCC------------CSSCEEEEECTTSCEEEEE
T ss_pred EEEEeCCccEEEECCCcE-EEEEecCCC------------CCCCEEEEEeCCCeEEEEC
Confidence 456666666655544443 245433211 1122335566677766553
No 394
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=29.21 E-value=2.1e+02 Score=22.49 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=81.3
Q ss_pred EcCCCCEEEEeecCCeEEEEEccC---------CeeeeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEcc---
Q 023822 42 FHKSSSYLVTASDDESIRLYDVTA---------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--- 109 (276)
Q Consensus 42 ~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~--- 109 (276)
+-|+...+++.+.+|.|+--.+.. +.....++. ...+..+........++..+. .|.++-+...
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~---~G~~~~~~~~eip 78 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTS---SGKVFWLPVHQLP 78 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEET---TSEEEEEEGGGSC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeC---CCeEEEEEHHHCc
Confidence 346778899999999999765532 112222322 334555555556666666666 7776666532
Q ss_pred C------Cceeee---ecccCcceEEEEecc---CCCEEEEeeCCCeEEEEeccCceee-------eeEee-cCCC-eeE
Q 023822 110 D------NKYLRY---FKGHHDRVVSLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQ-------GLLRV-QGRP-AAA 168 (276)
Q Consensus 110 ~------~~~~~~---~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~~~-------~~~~~-~~~~-~~~ 168 (276)
. |.++.. +. ....|.++..-+ ++.+|+.++..|.++.-.+...... ..+.. .... ...
T Consensus 79 ~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~ 157 (370)
T 3l6v_A 79 EAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVAL 157 (370)
T ss_dssp BCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEE
T ss_pred CCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEE
Confidence 1 222111 22 234455544322 3558999999999998886543221 11111 1111 223
Q ss_pred ecCCCcEEEEeeCCeEEEEeccc
Q 023822 169 YDDQGLVFAVAFGGYIRMFDARK 191 (276)
Q Consensus 169 ~~~~~~~l~~~~d~~i~~~d~~~ 191 (276)
...+..+++.+.+|.+..+....
T Consensus 158 ~~~~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 158 TDGDRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp ECSCCEEEEEETTSEEEEEEGGG
T ss_pred eCCCceEEEEeCCCeEEEEEccc
Confidence 34455677777788888887654
No 395
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=29.01 E-value=1.1e+02 Score=19.02 Aligned_cols=13 Identities=8% Similarity=0.261 Sum_probs=6.5
Q ss_pred EEEECCCCcEEEE
Q 023822 211 VVKFSNDGRLMLL 223 (276)
Q Consensus 211 ~~~~~~~~~~l~~ 223 (276)
.+.+.+||.+++.
T Consensus 88 ~l~Lq~dGNlvly 100 (111)
T 3mez_A 88 AATLGPDQHVTIY 100 (111)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEECCCCeEEEe
Confidence 3455555554444
No 396
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=27.03 E-value=2.3e+02 Score=22.35 Aligned_cols=105 Identities=6% Similarity=-0.084 Sum_probs=52.8
Q ss_pred EEEEEEcCCCCEEEEeecCCeEEEEEccC-Cee------------eeeeeeeeeceEEEEEeccCCeEEEeccCCCCCce
Q 023822 37 ISSMDFHKSSSYLVTASDDESIRLYDVTA-ATC------------LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 103 (276)
Q Consensus 37 v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 103 (276)
|..++.. +...+.-..||.|+.|=... +++ ...+. ....|..++. -..+.+.... +|.|
T Consensus 77 v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~--G~~hs~al~~---~G~v 148 (423)
T 3mvd_K 77 AVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKALCISA--GDSHSACLLE---DGRV 148 (423)
T ss_dssp EEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEE--CSSEEEEEET---TSCE
T ss_pred ceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEc--CcCeEEEEeC---CCeE
Confidence 5555544 33444456788898886432 110 01111 1224544443 3445555555 8899
Q ss_pred EEEEc--cC-Cce---------eeeecccCcceEEEEeccCCCEEEEeeCCCeEEEEecc
Q 023822 104 RLLSL--HD-NKY---------LRYFKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQR 151 (276)
Q Consensus 104 ~~~d~--~~-~~~---------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~ 151 (276)
+.|-. .. ++. ..........|..++. -....+.-..+|.|+.|-..
T Consensus 149 ~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~--G~~hs~alt~~G~v~~wG~n 206 (423)
T 3mvd_K 149 FAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIAS--GADHLVILTTAGKVFTVGCA 206 (423)
T ss_dssp EEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEE--CSSEEEEEETTSCEEEEECC
T ss_pred EEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEec--CCCeEEEEecCCeEEEeeCC
Confidence 99975 22 111 0001112234555554 33455566778999999643
No 397
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=24.35 E-value=2.1e+02 Score=20.96 Aligned_cols=139 Identities=9% Similarity=-0.015 Sum_probs=71.3
Q ss_pred EEEEeecCCeEEEEEccCCee-eeeeeeeeeceEEEEEeccCCeEEEeccCCCCCceEEEEccC-------Cceee---e
Q 023822 48 YLVTASDDESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-------NKYLR---Y 116 (276)
Q Consensus 48 ~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~~~d~~~-------~~~~~---~ 116 (276)
..++.+.+|.|+--....... ...+... ..+..+........++..+. .|.++-+.... |.++. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~---~Gr~~~~~~~elp~~r~~G~~i~~~i~ 79 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDS---TGRSYAIDPITLPSARGQGEPLTGKLT 79 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEET---TSEEEEECGGGSCCSSSCCEEGGGTCC
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeC---CCeEEEEEHHHCCCcCCCCeEeeeeec
Confidence 345556667666544322110 0112222 23333333334445555555 67766554322 22111 1
Q ss_pred ecccCcceEEEEeccCCCEEEEeeCCCeEEEEeccCc-------eeeeeEe-ecCCCeeEec--CCCcEEEEeeCCeEEE
Q 023822 117 FKGHHDRVVSLSLCSSKDCFISGSLDRTVLLWDQRAE-------KCQGLLR-VQGRPAAAYD--DQGLVFAVAFGGYIRM 186 (276)
Q Consensus 117 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~--~~~~~l~~~~d~~i~~ 186 (276)
+. ....|..+....++.+|+.++..|.++...+... .....+. ...+..+... ++..+++.+.+|.+..
T Consensus 80 L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 80 LP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp CC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred CC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 22 2345666644345667888999999999887532 2222222 1223333333 4556777777899988
Q ss_pred Eeccc
Q 023822 187 FDARK 191 (276)
Q Consensus 187 ~d~~~ 191 (276)
+....
T Consensus 159 f~~~e 163 (256)
T 1zvt_A 159 FPVSD 163 (256)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 88764
No 398
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=20.93 E-value=1.5e+02 Score=17.87 Aligned_cols=31 Identities=23% Similarity=0.192 Sum_probs=18.1
Q ss_pred EEEECCCCcEEEEeecCCcEEEEECCCCcEE
Q 023822 211 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 241 (276)
Q Consensus 211 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 241 (276)
+..+..+++.+...+.+|.+++=.+.....+
T Consensus 26 A~V~d~~g~~~giVG~~G~vyl~gl~~~g~L 56 (94)
T 3l48_A 26 ASVTSEKGRELGMVADEGLAWLSGVTPGETL 56 (94)
T ss_dssp CEEECTTCCEEEEBCGGGEEEESSCCTTCEE
T ss_pred cEEEcCCCceEEEECCCCEEEEECCCCCCEE
Confidence 3445556666666667777766665544443
No 399
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=20.43 E-value=2.1e+02 Score=24.76 Aligned_cols=55 Identities=11% Similarity=0.181 Sum_probs=0.0
Q ss_pred EEEEeecCCcEEEEECCC----CcEEEEeecCCCCCCce-EEEEECCCCcEEEEecCCCCC
Q 023822 220 LMLLTTMEGHIHVLDSFR----GTLLSTYNVKPVSRNST-LEASFSPEGMFVISGRVSPFS 275 (276)
Q Consensus 220 ~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~~~~~v-~~~~~s~~g~~l~~~~~dg~v 275 (276)
.++.|+.+|.|.-.-+.. ...+..+...+ ...+| ..+.++++..+|+.++.++.+
T Consensus 414 VlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~-~~~pI~~~l~l~~~~~~Lyv~s~~~V~ 473 (681)
T 3oky_A 414 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVT 473 (681)
T ss_dssp EEEEEBTTSEEEEEECCCTTTCCEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEE
T ss_pred EEEEECCCceEEEEEECCCCCceEEEEEeeecc-CCCceeeeeEEcCCCCEEEEEecCEEE
Done!