BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023823
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIG6|NIFU4_ARATH NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4
PE=2 SV=1
Length = 283
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/220 (82%), Positives = 199/220 (90%)
Query: 56 LSSSVQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPL 115
L+SS+ + KWN QRRTMFIQTQ TPNPSSLMFYPGKPVMEVGSADFPN R+A+ SPL
Sbjct: 61 LNSSLLAQKWNFLGGQRRTMFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPL 120
Query: 116 AKSLYGVDGITRVFFGSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAA 175
AKS+Y +DG+ RVFFGSDF+TVTKS+D SWD+LKPEIFAA+MDFYSSGQPLFLDS+ AAA
Sbjct: 121 AKSIYSIDGVVRVFFGSDFVTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAA 180
Query: 176 KDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPS 235
KDTAI+EDDSETVAMIKELLETRIRPAVQDDGGDIEY GFDPE+G VKLRMQGACSGCPS
Sbjct: 181 KDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPS 240
Query: 236 SSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVATLAGQM 275
SSVTLKSGIENMLMHYV EVK VEQE D EDE TL+G+M
Sbjct: 241 SSVTLKSGIENMLMHYVSEVKGVEQEFDGEDEEGTLSGEM 280
>sp|Q9C8J2|NIFU5_ARATH NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5
PE=2 SV=1
Length = 275
Score = 357 bits (915), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 166/206 (80%), Positives = 187/206 (90%), Gaps = 1/206 (0%)
Query: 71 QRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFF 130
QRRTMFIQTQ TPNPSSLMF PGKPVME+GSADFPN+R+AM+SPLAK+++ +DG+ RVF+
Sbjct: 71 QRRTMFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFY 130
Query: 131 GSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAM 190
GSDF+TVTKS+D +WD+LKP+IFA +MDFYSSGQPLFLDS+ AAKDTAI+EDDSETVAM
Sbjct: 131 GSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAM 190
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IKELLETRIRP+VQDDGGDIEY GFD ETG VKLRMQGACSGCPSSSVTLKSGIENMLMH
Sbjct: 191 IKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
Query: 251 YVPEVKSVEQELDAEDEVATLAGQME 276
YV EVK VEQE D E+E T +G ME
Sbjct: 251 YVSEVKGVEQEFDGEEE-GTSSGPME 275
>sp|B4JWR9|NFU1_DROGR NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1
Length = 298
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 164/237 (69%), Gaps = 14/237 (5%)
Query: 34 RTLSYLSNPITSQNSTLLKSIPLSSSVQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYPG 93
+T S L+ +T Q L K PL + ++ +R+MFIQTQ TPNP SL F PG
Sbjct: 47 KTYSTLAVDLTKQQMLLRK--PLETLA-------LQITKRSMFIQTQDTPNPDSLKFLPG 97
Query: 94 KPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSDFITVTKSEDTSWDLLKPEI 152
V+ G+ DFP+A AA SPLAK L+ V+G+ VFFGSDFIT++K E+ W L+KPE+
Sbjct: 98 VEVLGKGNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEENGEWGLIKPEV 157
Query: 153 FAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEY 212
FA IMDF++SG P+ ++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI +
Sbjct: 158 FAVIMDFFASGLPILHEARPNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVF 215
Query: 213 RGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 269
+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+PEV+SVEQ D D+VA
Sbjct: 216 ISY--EKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEVDKVA 270
>sp|B4NE93|NFU1_DROWI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila willistoni GN=GK25604 PE=3 SV=1
Length = 289
Score = 241 bits (615), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 166/238 (69%), Gaps = 12/238 (5%)
Query: 33 SRTLSYLSNPITSQNSTLLKSIPLSSSVQSGKWNLFRVQRRTMFIQTQPTPNPSSLMFYP 92
SR +L++ + +Q+S + S P + S+ + + +RTMFIQTQ TPNP SL F P
Sbjct: 33 SRGFVHLTSSV-AQSSAIHVSTPSTPSL------MLIMGKRTMFIQTQDTPNPESLKFLP 85
Query: 93 GKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSDFITVTKSEDTSWDLLKPE 151
G V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGSDFIT++K E W L+KPE
Sbjct: 86 GVEVLGKGNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSDFITISKEEAAEWGLIKPE 145
Query: 152 IFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIE 211
+FA IMDF++SG P+ ++ A DT I EDD ETV MIKELL+TRIRP VQ+DGGDI
Sbjct: 146 VFAVIMDFFASGLPILHEARNNA--DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIV 203
Query: 212 YRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 269
+ +D G VKL+MQG+CS CPSS VTLK+G++NML Y+PEV+SVEQ D D++A
Sbjct: 204 FMSYD--NGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADKMA 259
>sp|Q8SY96|NFU1_DROME NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1
Length = 283
Score = 241 bits (615), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 72 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFF 130
RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A NSPLAK L+ V+G+ VFF
Sbjct: 64 RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFF 123
Query: 131 GSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAM 190
G+DF+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 181
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 251 YVPEVKSVEQELDAEDEV 268
Y+PEV+SVEQ D D +
Sbjct: 240 YIPEVESVEQVFDEADRM 257
>sp|B4PZ52|NFU1_DROYA NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila yakuba GN=GE15286 PE=3 SV=1
Length = 283
Score = 240 bits (612), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 147/199 (73%), Gaps = 5/199 (2%)
Query: 72 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFF 130
RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFF
Sbjct: 64 RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123
Query: 131 GSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAM 190
G+DF+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMM 181
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 251 YVPEVKSVEQELDAEDEVA 269
Y+PEV+SVEQ D D +
Sbjct: 240 YIPEVESVEQVFDEADRMV 258
>sp|B3NYF7|NFU1_DROER NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila erecta GN=GG17526 PE=3 SV=1
Length = 283
Score = 240 bits (612), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 72 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFF 130
RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFF
Sbjct: 64 RRSMFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123
Query: 131 GSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAM 190
G+DF+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMM 181
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 251 YVPEVKSVEQELDAEDEV 268
Y+PEV+SVEQ D D +
Sbjct: 240 YIPEVESVEQVFDEADRM 257
>sp|B4IMF6|NFU1_DROSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila sechellia GN=GM13534 PE=3 SV=1
Length = 283
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 72 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFF 130
RR+MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFF
Sbjct: 64 RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFF 123
Query: 131 GSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAM 190
G+DFIT++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV M
Sbjct: 124 GADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 181
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 251 YVPEVKSVEQELDAEDEV 268
Y+PEV+SVEQ D D +
Sbjct: 240 YIPEVESVEQVFDEADRM 257
>sp|B4M375|NFU1_DROVI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila virilis GN=GJ19011 PE=3 SV=1
Length = 298
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 149/203 (73%), Gaps = 5/203 (2%)
Query: 69 RVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITR 127
++ RR+MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+
Sbjct: 69 QISRRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPSGSAAHCSPLAKLLFRVEGVRA 128
Query: 128 VFFGSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSET 187
VFFG DFIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ET
Sbjct: 129 VFFGGDFITISKEESGEWGLIKPEVFAVIMDFFASGLPVIHEARPNA--DTEILEDDDET 186
Query: 188 VAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENM 247
V MIKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NM
Sbjct: 187 VMMIKELLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNM 244
Query: 248 LMHYVPEVKSVEQELDAEDEVAT 270
L Y+PEV+SVEQ D D++A
Sbjct: 245 LQFYIPEVESVEQVFDDADKMAN 267
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 146/198 (73%), Gaps = 5/198 (2%)
Query: 73 RTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFG 131
R MFIQTQ TPNP SL F PG V+ G+ DFP+ A SPLAK L+ V+G+ VFFG
Sbjct: 65 RNMFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSPLAKLLFRVEGVRAVFFG 124
Query: 132 SDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMI 191
+DFIT++K E W L+KPE+FA IMDF++SG P+ +S A DT I EDD ETV MI
Sbjct: 125 ADFITISKEEGAEWSLIKPEVFAVIMDFFASGLPILHESTPNA--DTEILEDDDETVMMI 182
Query: 192 KELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHY 251
KELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y
Sbjct: 183 KELLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFY 240
Query: 252 VPEVKSVEQELDAEDEVA 269
+PEV+SVEQ DA D++A
Sbjct: 241 IPEVESVEQVFDAVDKMA 258
>sp|B4R3T1|NFU1_DROSI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila simulans GN=GD15490 PE=3 SV=1
Length = 283
Score = 238 bits (607), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 72 RRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFF 130
RR+MFIQTQ TPNP SL F PG V+ G+ DFP+ A +SPLAK L+ V+G+ VFF
Sbjct: 64 RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFF 123
Query: 131 GSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAM 190
G+DFIT++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV M
Sbjct: 124 GADFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 181
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IKELL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 251 YVPEVKSVEQELDAEDEV 268
Y+PEV+SVEQ D D +
Sbjct: 240 YIPEVESVEQVFDEADRM 257
>sp|Q9UMS0|NFU1_HUMAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo
sapiens GN=NFU1 PE=1 SV=2
Length = 254
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 161/226 (71%), Gaps = 9/226 (3%)
Query: 46 QNSTLLKSIPLSSSVQSGKWNL---FRVQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA 102
+N +K PL VQ + L F R MFIQTQ TPNP+SL F PGKPV+E +
Sbjct: 27 KNPYTIKKQPLHQFVQRPLFPLPAAFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLETRTM 86
Query: 103 DFPNARAAMNSPLAKSLYGVDGITRVFFGSDFITVTK-SEDTSWDLLKPEIFAAIMDFYS 161
DFP AA SPLA+ L+ ++G+ VFFG DFITVTK +E+ W+LLKP+I+A IMDF++
Sbjct: 87 DFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFA 146
Query: 162 SGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGT 221
SG PL + ET + + A +E+D E VAMIKELL+TRIRP VQ+DGGD+ Y+GF E G
Sbjct: 147 SGLPL-VTEETPSGE--AGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGF--EDGI 201
Query: 222 VKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDE 267
V+L++QG+C+ CPSS +TLK+GI+NML Y+PEV+ VEQ +D E +
Sbjct: 202 VQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESD 247
>sp|Q9QZ23|NFU1_MOUSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus
musculus GN=Nfu1 PE=1 SV=2
Length = 255
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 148/195 (75%), Gaps = 4/195 (2%)
Query: 73 RTMFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGS 132
R MFIQTQ TPNP+SL F PGKPV+E + DFP AA SPLA+ L+ ++G+ VFFG
Sbjct: 55 RFMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGP 114
Query: 133 DFITVTK-SEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMI 191
DFITVTK +E+ W+LLKP+I+A IMDF++SG PL + ET A +E+D E VAMI
Sbjct: 115 DFITVTKENEELDWNLLKPDIYATIMDFFASGLPL-VTEETPPPPGEAGSEEDDEVVAMI 173
Query: 192 KELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHY 251
KELL+TRIRP VQ+DGGD+ YRGF E G V+L++QG+C+ CPSS +TLKSGI+NML Y
Sbjct: 174 KELLDTRIRPTVQEDGGDVIYRGF--EDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFY 231
Query: 252 VPEVKSVEQELDAED 266
+PEV+ VEQ +D ++
Sbjct: 232 IPEVEGVEQVMDDDE 246
>sp|B4H303|NFU1_DROPE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila persimilis GN=GL13432 PE=3 SV=1
Length = 282
Score = 233 bits (595), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 147/201 (73%), Gaps = 5/201 (2%)
Query: 70 VQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRV 128
+ +R+MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ V
Sbjct: 58 IGKRSMFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAV 117
Query: 129 FFGSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETV 188
FFGSDFIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I +DD ETV
Sbjct: 118 FFGSDFITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILDDDDETV 175
Query: 189 AMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENML 248
MIKELL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 176 MMIKELLDTRIRPTVQEDGGDIVFISY--ENGVVKLKMQGSCSSCPSSIVTLKNGVQNML 233
Query: 249 MHYVPEVKSVEQELDAEDEVA 269
Y+PEV+SVEQ D D +A
Sbjct: 234 QFYIPEVESVEQVFDDADRMA 254
>sp|B5DKJ8|NFU1_DROPS NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=GA22888
PE=3 SV=1
Length = 286
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 147/201 (73%), Gaps = 5/201 (2%)
Query: 70 VQRRTMFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRV 128
+ +R+MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ V
Sbjct: 62 IGKRSMFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAV 121
Query: 129 FFGSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETV 188
FFGSDFIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I +DD ETV
Sbjct: 122 FFGSDFITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILDDDDETV 179
Query: 189 AMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENML 248
MIKELL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS VTLK+G++NML
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFISY--ENGVVKLKMQGSCSSCPSSIVTLKNGVQNML 237
Query: 249 MHYVPEVKSVEQELDAEDEVA 269
Y+PEV+SVEQ D D +A
Sbjct: 238 QFYIPEVESVEQVFDDVDRMA 258
>sp|Q9UUB8|YH9J_SCHPO NifU-like protein C1709.19c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC1709.19c PE=3 SV=1
Length = 260
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 165/242 (68%), Gaps = 9/242 (3%)
Query: 32 YSRTLSYLSNPITSQNSTLLKSIPLSSS--VQSGKWNLFRVQRRTMFIQTQPTPNPSSLM 89
+ R + + S Q T L P+SS+ V + ++ L + R+++I+++ TPN ++L
Sbjct: 3 FPRVVPFQSLRTAFQKKTFL---PVSSAGNVFTPRFQLQAI--RSIWIRSEETPNENALK 57
Query: 90 FYPGKPVM--EVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDFITVTKSEDTSWDL 147
F PG ++ +GS +F + +NSPLA+ L+ +DG+ +FFG DFITV+K T W
Sbjct: 58 FLPGLDILPPTIGSCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGKDFITVSKGAGTEWAQ 117
Query: 148 LKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDG 207
+KPE+F+ IM+ S+G P+ + A DT I E DS+ VAMIKEL+ET IRP++Q+DG
Sbjct: 118 MKPEVFSVIMEHLSNGSPVLSEEPLKGASDTQILESDSQIVAMIKELIETSIRPSIQEDG 177
Query: 208 GDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDE 267
GD+E+RGFD +TGTV L+++GAC C SS+VTLK+GI+ ML HY+PEV++V Q LD E+E
Sbjct: 178 GDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPEVENVVQVLDPEEE 237
Query: 268 VA 269
VA
Sbjct: 238 VA 239
>sp|P32860|NFU1_YEAST NifU-like protein, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NFU1 PE=1 SV=2
Length = 256
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 130/234 (55%), Gaps = 20/234 (8%)
Query: 56 LSSSVQSGKWNLFRVQ-RRTMFIQTQPTPNPSSLMFYP--GKPVMEVGSADF----PNAR 108
S + GK +F + +R + I+T TPN ++L F G+ + GS +
Sbjct: 2 FKSVAKLGKSPIFYLNSQRLIHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDEN 61
Query: 109 AAMNSPLAKSLY-GVDGITRVFFGSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLF 167
+S LA+ ++ G+ + G DF+T+ K W+ +KPEI + + G+ +
Sbjct: 62 LINHSKLAQQIFLQCPGVESLMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVI 121
Query: 168 LDSETAAAKDTA------------INEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGF 215
A ++ + E+D E +I+EL++TRIRPA+ +DGGDI+YRG+
Sbjct: 122 SKEFHAVQEEEGEGGYKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGW 181
Query: 216 DPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 269
DP+TGTV LR+QGAC+ C SS VTLK GIE+ML HYV EVK V Q +D E E+A
Sbjct: 182 DPKTGTVYLRLQGACTSCSSSEVTLKYGIESMLKHYVDEVKEVIQIMDPEQEIA 235
>sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3
PE=2 SV=1
Length = 236
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 199 IRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
+RP++ DGG++ D V L++QGAC CPSSS+TLK GIE+ L +PE+ SV
Sbjct: 96 VRPSLMADGGNVALHEIDGLV--VVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSV 153
Query: 259 EQELDAE 265
EQ L++E
Sbjct: 154 EQFLESE 160
>sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2
PE=1 SV=1
Length = 235
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 159 FYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLET---RIRPAVQDDGGDIEYRGF 215
F SS Q LF S+ A T D V + +E +E+ IRP + DGG++
Sbjct: 58 FLSSRQ-LFRRSKVVKAVATP---DPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEI 113
Query: 216 DPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAE 265
D V++++QGAC CPSS++T+K GIE LM +PE+ +VE D E
Sbjct: 114 D--GNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEE 161
>sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=NIFU1 PE=1 SV=1
Length = 226
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 198 RIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKS 257
++RP + DGGD+ + V+L++QGAC CPSS +T+K GIE LM +P+V +
Sbjct: 86 QVRPYLTADGGDVAL--HEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAA 143
Query: 258 VEQELDAE 265
VE D E
Sbjct: 144 VEPVTDKE 151
>sp|P33179|NIFU_ANASL Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain
L31) GN=nifU PE=3 SV=1
Length = 112
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 186 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIE 245
+ +A+I+++L+ +RP + DGGD+E +D + VK+ +QGAC CPSS+ TLK IE
Sbjct: 39 QKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDIVKVVLQGACGSCPSSTATLKIAIE 96
Query: 246 NMLMHYV 252
+ L +
Sbjct: 97 SRLRDRI 103
>sp|O32119|YUTI_BACSU Putative nitrogen fixation protein YutI OS=Bacillus subtilis
(strain 168) GN=yutI PE=3 SV=1
Length = 111
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLM 249
++E+L+ ++RP + DGGD E D + G VKLR+ GAC CPSS++TLK+GIE L+
Sbjct: 43 VQEVLD-KLRPFLLRDGGDCEL--VDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 98
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 186 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIE 245
+ +A+I+++L+ +RP + DGGD+E +D + VK+ +QGAC C SS+ TLK IE
Sbjct: 227 QKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDIVKVVLQGACGSCSSSTATLKIAIE 284
Query: 246 NML 248
+ L
Sbjct: 285 SRL 287
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 186 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIE 245
+ +A+I+++L+ +RP + DGGD+E +D + VK+ +QGAC C SS+ TLK IE
Sbjct: 227 QKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDIVKVVLQGACGSCSSSTATLKIAIE 284
Query: 246 NML 248
+ L
Sbjct: 285 SRL 287
>sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1
PE=1 SV=1
Length = 231
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 193 ELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH-Y 251
+L+ +RP + DGG+++ E G V L++QGAC+ CPSSS T+ GIE +L +
Sbjct: 91 DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKF 148
Query: 252 VPEVKSVEQELDAE 265
+K + Q D E
Sbjct: 149 GDALKDIRQVFDEE 162
>sp|Q056Z1|NFUA_BUCCC Fe/S biogenesis protein NfuA OS=Buchnera aphidicola subsp. Cinara
cedri (strain Cc) GN=nfuA PE=3 SV=1
Length = 193
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 191 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 250
IK L T+I P + GG + ++G V L+ G C+GC +TLK GIE L+
Sbjct: 113 IKNFLTTQINPKLLLHGGSVALYDI-TDSGVVFLKFSGGCNGCSMIDITLKKGIEKKLIK 171
Query: 251 YVPEVKSVE 259
PE+ SVE
Sbjct: 172 NFPEISSVE 180
>sp|B4SPV3|NFUA_STRM5 Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain R551-3) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 183 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKS 242
D + V + ++E I P + GG + + E G V LR G C GC + VTLK
Sbjct: 105 DAASLVERVHWVVENEINPQLASHGGKVAVQEVSAE-GVVLLRFGGGCQGCGMADVTLKQ 163
Query: 243 GIENMLMHYVPEVKSVEQELD 263
GIE LM VP V +V D
Sbjct: 164 GIEKTLMGRVPGVTAVRDATD 184
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 186 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIE 245
+ +A+I+++L+ +RP + DGGD+E +D + VK+ ++GAC C SS+ TLK +E
Sbjct: 132 QKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDFVKVTLKGACGSCASSTATLKDAVE 189
Query: 246 NML 248
L
Sbjct: 190 AKL 192
>sp|B2FM87|NFUA_STRMK Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain K279a) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 183 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKS 242
D + V + ++E I P + GG + + E G V LR G C GC + VTLK
Sbjct: 105 DAASLVERVHWVVENEINPQLASHGGKVAVQEVSAE-GVVLLRFGGGCQGCGMADVTLKQ 163
Query: 243 GIENMLMHYVPEVKSVEQELD 263
GIE LM VP V +V D
Sbjct: 164 GIEKTLMGRVPGVTAVRDATD 184
>sp|C4K405|NFUA_HAMD5 Fe/S biogenesis protein NfuA OS=Hamiltonella defensa subsp.
Acyrthosiphon pisum (strain 5AT) GN=nfuA PE=3 SV=1
Length = 191
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 92 PGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDFITVTKSEDTSWDLLKPE 151
PGKP E G + P A S+ D + S F+ + P
Sbjct: 32 PGKPTAECGVSYCP----------ADSVESADTHLKFNLFSVFVDPISA---------PY 72
Query: 152 IFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGD 209
+ A +DF + G L L + A + A DD+ + + +L+++I P + + GG
Sbjct: 73 LNEAAIDFVTDELGSQLTLKAPNAKVRKVA---DDAPLIERVDYVLQSQINPQLANHGGR 129
Query: 210 IEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVE 259
+ + V L+ G C+GC VTLK GIE L+ PE+K V+
Sbjct: 130 VTLMEITDDAFAV-LQFGGGCNGCSMVDVTLKEGIEKELLQQFPELKGVK 178
>sp|Q8PKQ2|NFUA_XANAC Fe/S biogenesis protein NfuA OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 188 VAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENM 247
V ++ ++E I P + GG + + E G V LR G C GC + VTLK GIE
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSAE-GVVLLRFGGGCHGCGMADVTLKQGIEKT 168
Query: 248 LMHYVPEVKSVEQELD 263
LM VP V +V D
Sbjct: 169 LMGRVPGVTAVRDATD 184
>sp|Q3YWL1|NFUA_SHISS Fe/S biogenesis protein NfuA OS=Shigella sonnei (strain Ss046)
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|P63023|NFUA_SHIFL Fe/S biogenesis protein NfuA OS=Shigella flexneri GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q0SZQ1|NFUA_SHIF8 Fe/S biogenesis protein NfuA OS=Shigella flexneri serotype 5b
(strain 8401) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q32AM7|NFUA_SHIDS Fe/S biogenesis protein NfuA OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q31VL8|NFUA_SHIBS Fe/S biogenesis protein NfuA OS=Shigella boydii serotype 4 (strain
Sb227) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B2U3M4|NFUA_SHIB3 Fe/S biogenesis protein NfuA OS=Shigella boydii serotype 18 (strain
CDC 3083-94 / BS512) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B7LSB7|NFUA_ESCF3 Fe/S biogenesis protein NfuA OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q1R5M0|NFUA_ECOUT Fe/S biogenesis protein NfuA OS=Escherichia coli (strain UTI89 /
UPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B1LHL4|NFUA_ECOSM Fe/S biogenesis protein NfuA OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B6I2X8|NFUA_ECOSE Fe/S biogenesis protein NfuA OS=Escherichia coli (strain SE11)
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B7NE19|NFUA_ECOLU Fe/S biogenesis protein NfuA OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|P63020|NFUA_ECOLI Fe/S biogenesis protein NfuA OS=Escherichia coli (strain K12)
GN=nfuA PE=1 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B1IP51|NFUA_ECOLC Fe/S biogenesis protein NfuA OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|P63021|NFUA_ECOL6 Fe/S biogenesis protein NfuA OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q0TC53|NFUA_ECOL5 Fe/S biogenesis protein NfuA OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|A1AGT8|NFUA_ECOK1 Fe/S biogenesis protein NfuA OS=Escherichia coli O1:K1 / APEC
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|A8A5M2|NFUA_ECOHS Fe/S biogenesis protein NfuA OS=Escherichia coli O9:H4 (strain HS)
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B1X760|NFUA_ECODH Fe/S biogenesis protein NfuA OS=Escherichia coli (strain K12 /
DH10B) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|C4ZVW3|NFUA_ECOBW Fe/S biogenesis protein NfuA OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 146 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 203
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 204 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 258
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,314,587
Number of Sequences: 539616
Number of extensions: 4117437
Number of successful extensions: 11764
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 11399
Number of HSP's gapped (non-prelim): 229
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)