BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023828
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61817|SIRB_BACME Sirohydrochlorin ferrochelatase OS=Bacillus megaterium GN=sirB PE=3
SV=1
Length = 266
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
D V+ V HGSR +E F+ ++ I E +ELA P+I+ F +C++QGA
Sbjct: 13 DAVLYVCHGSRVKEGADQAVAFIERCKKNLDVPIQEVCFLELASPTIEQGFEACIEQGAT 72
Query: 187 RVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRI 241
R+ + P L H DIP + + +P V + P G+ E++VD++ +RI
Sbjct: 73 RIAIVPLLLLTAAHAKHDIPEEIQKVYERYPQVEVLYGEPFGVDERIVDILVERI 127
Score = 35.8 bits (81), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
V++V GS L + + + K + V ++ A P++K+ + +V
Sbjct: 140 VLLVGRGSSDPAVKRDLNEIAQLLKGKGAFKEVSTCYLAAASPNLKEGLHLAKRTSYKQV 199
Query: 189 IVSPFFLFPG---RHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRIKHCL 245
V P+ LF G +++ L+ +A + +I+ LG H+ L +++ ++K L
Sbjct: 200 FVLPYLLFTGILMNEIKEELEQLSTDAQQ------FILANYLGYHDGLAHILSHQVKTLL 253
Query: 246 S 246
S
Sbjct: 254 S 254
>sp|O87690|CBIX_BACME Sirohydrochlorin cobaltochelatase OS=Bacillus megaterium GN=cbiX
PE=1 SV=1
Length = 306
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREK-TGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
V+ V HGSR E N ++F++ + ++VE +E P++ +CV +GA
Sbjct: 9 VLFVGHGSRDPEGND--REFISTMKHDWDASILVETCFLEFERPNVSQGIDTCVAKGAQD 66
Query: 188 VIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRIK 242
V+V P L P H IP+ EA +++P V ++ P+G+HE+ ++++ R++
Sbjct: 67 VVVIPIMLLPAGHSKIHIPAAIDEAKEKYPHVNFVYGRPIGVHEEALEILKTRLQ 121
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 93 PIWVHPNSLNFQRGPSRTKHLSIKSSSRDGVGDKDGVIIVDHGSRRRESNLMLKQFVAMF 152
PI VH +L + + ++++ + D VI++ G ++N L + +
Sbjct: 105 PIGVHEEALEILKTRLQESGENLETPAED-----TAVIVLGRGGSDPDANSDLYKITRLL 159
Query: 153 REKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFFLFPGRHWCQDIPSLTAEA 212
EKT Y IVE + M + P I + C++ GA +V++ P+FLF G + + + +
Sbjct: 160 WEKTNYKIVETSFMGVTAPLIDEGVERCLKLGAKKVVILPYFLFTGV-LIKRLEEMVKQY 218
Query: 213 AKEHPGVPYIVTAPLGLHEQLVDVVNDRIKHCLSHAVG-DADEC 255
+H + + + G H +L ++ +R + L V + D C
Sbjct: 219 KMQHENIEFKLAGYFGFHPKLQTILKERAEEGLEGEVKMNCDTC 262
>sp|O34632|SIRB_BACSU Sirohydrochlorin ferrochelatase OS=Bacillus subtilis (strain 168)
GN=sirB PE=2 SV=1
Length = 261
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
K ++ V HGSR +++ F+ + + E + +EL EP+I+ F +CV+QGA
Sbjct: 2 KQAILYVGHGSRVKKAQQEAAAFLEGCKAHISVPVQEISFLELQEPTIETGFEACVKQGA 61
Query: 186 NRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRIK 242
+ V P L H DIP A +P V P+G+ E++V V R+K
Sbjct: 62 THIAVVPLLLLTAAHAKHDIPEEIVRVASRYPSVRISYGKPIGIDEEVVKAVYHRMK 118
>sp|P61819|CBIX_METMP Sirohydrochlorin cobaltochelatase OS=Methanococcus maripaludis
(strain S2 / LL) GN=cbiX PE=3 SV=1
Length = 144
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 25/139 (17%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ +++V HGSR S ++ + + + Y IVE ME EP+I + GA
Sbjct: 2 EALVLVGHGSRLPHSKNVVMEVAEKIKARNIYDIVEVGMMEFNEPTIPQTIKKVIDAGAK 61
Query: 187 RVIVSPFFLFPGRHWCQDIPSLTA------------------------EAAKEHP-GVPY 221
+VIV+P FL PG H +DIP + A E P GV
Sbjct: 62 KVIVTPVFLAPGNHTERDIPKILGIYEGDDEGGHHHHHDHEHHHHHHDTTAVEIPEGVEL 121
Query: 222 IVTAPLGLHEQLVDVVNDR 240
+ P+G ++++D+V DR
Sbjct: 122 VYRKPMGADDRIIDIVLDR 140
>sp|Q58380|CBIX_METJA Sirohydrochlorin cobaltochelatase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=cbiX PE=3 SV=1
Length = 143
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ +++V HGSR S +L + +E+ + IVE ME +EP+I A ++QGA
Sbjct: 2 EALVLVGHGSRLPYSKELLVKLAEKVKERNLFPIVEIGLMEFSEPTIPQAVKKAIEQGAK 61
Query: 187 RVIVSPFFLFPGRHWCQDIPSL 208
R+IV P FL G H +DIP L
Sbjct: 62 RIIVVPVFLAHGIHTTRDIPRL 83
>sp|Q975N6|CBIX_SULTO Sirohydrochlorin cobaltochelatase OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=cbiX PE=3
SV=1
Length = 120
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
GV++V HGS+ +E + Q+ + R+ + +VE +E +PSI +A G +
Sbjct: 3 GVLLVLHGSKIKEWQDVAIQYANLLRKY--FDLVEYGFIEFNQPSITEAAKKLASNGVDT 60
Query: 188 VIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRIKHCL 245
+IV P G H+ +DIP + +E GV ++ P+G+ E++ +++ +R++ L
Sbjct: 61 IIVVPLLFAAGTHFKRDIP----KQLEEIKGVKIMIAEPIGVDERIAEILKERVEEVL 114
>sp|A6UWT5|CBIX_META3 Sirohydrochlorin cobaltochelatase OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=cbiX PE=3 SV=1
Length = 143
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 127 DGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGAN 186
+ ++++ HGSR S ++ + +EK Y IVE ME EP+I + +GA
Sbjct: 2 EALVLLGHGSRLPYSKEIVGKVAEKIKEKNIYDIVEIGMMEFNEPTIPQTINKVIAEGAK 61
Query: 187 RVIVSPFFLFPGRHWCQDIPSLTA-----------------------EAAKEHP-GVPYI 222
++I+ P FL G H +DIP + E P GV I
Sbjct: 62 KIIIVPVFLAHGNHTKRDIPQILGLIECEEHHHEGEGGHHHHHHHHHGEKIEVPEGVEII 121
Query: 223 VTAPLGLHEQLVDVVNDRIK 242
P+G +++VD+V DR K
Sbjct: 122 YRDPMGADDRVVDIVLDRAK 141
>sp|Q4JAI2|CBIX_SULAC Sirohydrochlorin cobaltochelatase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=cbiX PE=3 SV=1
Length = 123
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
G+++V HGS+ +E ++ + K + +VE +E+ EP I +A V++GA+
Sbjct: 3 GLLLVLHGSKIKEWQEIVINYAEEL--KRHFPLVEYGFIEINEPKIDEAAKKLVERGADT 60
Query: 188 VIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRIKHCLS 246
++V P G H+ +DIP+ E + + I+ P+G +++VD++ ++ + LS
Sbjct: 61 IVVVPLLFAAGMHFKRDIPNQLKETSNK---AKIIIAEPIGFDKRIVDILKEKAEKALS 116
>sp|Q8TJZ5|CBIX_METAC Sirohydrochlorin cobaltochelatase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=cbiX
PE=3 SV=1
Length = 130
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q +K ++V ME +EP++++A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVSQIADYIAQKHSDVVVRAGFMENSEPTLEEAIAGFAGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTAEAAK-------EHPGVPYIVTAPLGLHEQLVDVV 237
++ P FL G H +DIP + + K + VP PLG E + D+V
Sbjct: 63 VTKIAAVPVFLASGVHITKDIPGILSLDEKGCGILNIDGKDVPLCYAKPLGADELIADLV 122
Query: 238 NDRIKHCL 245
R++ L
Sbjct: 123 FKRVQEAL 130
>sp|Q12X56|CBIX_METBU Sirohydrochlorin cobaltochelatase OS=Methanococcoides burtonii
(strain DSM 6242) GN=cbiX PE=3 SV=1
Length = 131
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGSR + ++ + A +K +++ ME P++ +A G
Sbjct: 3 EKIGILAIGHGSRLPYNKEVVSEIAATIAKKHPDYVIKAGFMENTLPTVMEALADFDGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPG--------VPYIVTAPLGLHEQLVDV 236
++I P FL G H +DIP + + + G +P PLG HE L D+
Sbjct: 63 VTKIIAVPVFLASGVHITEDIPEILKLDPETNEGKITVDGNEIPVTFGKPLGHHELLADL 122
Query: 237 VNDR 240
V +R
Sbjct: 123 VFER 126
>sp|Q8TY77|CBIX_METKA Sirohydrochlorin cobaltochelatase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=cbiX PE=3
SV=1
Length = 143
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 128 GVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANR 187
V++V HGSR S ++++ E + VE MEL EP++++A + G ++
Sbjct: 3 AVVLVGHGSRLPYSRQVVEKIAEYVEEMGDFETVEVGFMELCEPTVQEAVKKAAESGVDK 62
Query: 188 VIVSPFFLFPGRHWCQDIPSLTA--------------EAAKEHPGVPYIVTA------PL 227
++V P FL G H +DIP + P V A PL
Sbjct: 63 IVVVPVFLAHGVHTKRDIPKMLGLEPEWDDDEDDHDHHHHHHRDYTPVDVDAEIVYAEPL 122
Query: 228 GLHEQLVDVVNDRIKHCLSH 247
G ++ ++V DRIK L
Sbjct: 123 GADPRIAEIVIDRIKEALGE 142
>sp|C3NGG2|CBIX_SULIN Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=cbiX PE=3 SV=1
Length = 128
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVVN 238
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++ +V+
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKIGEVLV 117
Query: 239 DRIKHC 244
R+
Sbjct: 118 KRVNET 123
>sp|C3MWZ3|CBIX_SULIM Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVVN 238
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++ +V+
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKIGEVLV 117
Query: 239 DRIKHC 244
R+
Sbjct: 118 KRVNET 123
>sp|C3MR05|CBIX_SULIL Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVVN 238
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++ +V+
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKIGEVLV 117
Query: 239 DRIKHC 244
R+
Sbjct: 118 KRVNET 123
>sp|C4KID1|CBIX_SULIK Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=cbiX PE=3 SV=1
Length = 128
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVVN 238
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++ +V+
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKIGEVLV 117
Query: 239 DRIKHC 244
R+
Sbjct: 118 KRVNET 123
>sp|C3MZ53|CBIX_SULIA Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
M.16.27) GN=cbiX PE=3 SV=1
Length = 128
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVVN 238
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++ +V+
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKIGEVLV 117
Query: 239 DRIKHC 244
R+
Sbjct: 118 KRVNET 123
>sp|C3N773|CBIX_SULIY Sirohydrochlorin cobaltochelatase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=cbiX PE=3 SV=1
Length = 128
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 64/119 (53%), Gaps = 14/119 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSRY-----FNLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVV 237
AN+++V P G H+ +DIP L E ++ G + I+ PLG E++ +V+
Sbjct: 58 ANKIVVVPLLFATGTHFKRDIPRLLGIDGDEKKIQYMGKEIEIIIADPLGFDEKIGEVL 116
>sp|Q55451|CBIX_SYNY3 Sirohydrochlorin cobaltochelatase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cbiX PE=1 SV=1
Length = 336
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 129 VIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRV 188
++++ HG+R + FVA ++ V P +EL EP+I+ CV QG +
Sbjct: 27 LLMIGHGTRDEDGRQTFLDFVAQYQALDHSRPVIPCFLELTEPNIQAGVQQCVDQGFEEI 86
Query: 189 IVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAPLGLHEQLVDVVNDRIKH 243
P LF RH D+ + + + HP + + G+ ++D+ R+
Sbjct: 87 SALPILLFAARHNKFDVTNELDRSRQAHPQINFFYGRHFGITPAILDLWKARLNQ 141
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 108 SRTKHLSIKSSSRDGVGDKDGVII-VDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHM 166
+R L ++ G+ +D V++ V GS ++N + + M E +GY VE +
Sbjct: 137 ARLNQLDSPEANPQGIDRQDTVLLFVGRGSSDPDANGDVYKMARMLWEGSGYQTVETCFI 196
Query: 167 ELAEPSIKDAFGSCVQQGANRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPGVPYIVTAP 226
++ P +++ F R+IV P+FLF G + I ++T E P + +
Sbjct: 197 GISHPRLEEGFRRARLYQPKRIIVLPYFLFMG-ALVKKIFTITEEQRATFPEIEIQSLSE 255
Query: 227 LGLHEQLVDVVNDR-IKHCLSHAVGDADEC 255
+G+ +L+ +V +R I+ L + + C
Sbjct: 256 MGIQPELLALVREREIETQLGQVAMNCEAC 285
>sp|Q8PZH6|CBIX_METMA Sirohydrochlorin cobaltochelatase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=cbiX PE=3 SV=1
Length = 130
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q +K ++V ME +EP++++A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVTQIANYIAQKHSDVVVRAGFMENSEPTLEEAIEGFSGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTAEAAKEHPG--------VPYIVTAPLGLHEQLVDV 236
++ P FL G H +DIP + + KE G VP PLG E + ++
Sbjct: 63 VTKISAVPVFLASGVHITKDIPEILS-LDKEGCGILEIDGKEVPLCYAKPLGADELIAEL 121
Query: 237 VNDRIKHCL 245
V R++ L
Sbjct: 122 VFKRVQESL 130
>sp|P61816|CBIX_METBF Sirohydrochlorin cobaltochelatase OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=cbiX PE=1 SV=1
Length = 130
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 125 DKDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
+K G++ + HGS+ + ++ Q K ++V ME +EP++ +A G
Sbjct: 3 EKLGILAIGHGSKLPYNKEVVTQIADYIARKHSDVVVRAGFMENSEPTLGEAIEGFSGTG 62
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA-------EAAKEHPGVPYIVTAPLGLHEQLVDVV 237
++ P FL G H +DIP + + + VP PLG E + D+V
Sbjct: 63 VTKIAAVPVFLASGVHITKDIPRILSLDENGCGTLEIDGKTVPLCYANPLGADELIADLV 122
Query: 238 NDRIKHCL 245
R++ L
Sbjct: 123 FKRVQEAL 130
>sp|O27448|CBIX_METTH Sirohydrochlorin cobaltochelatase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=cbiX PE=1 SV=2
Length = 143
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 126 KDGVIIVDHGSRRRESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGA 185
K GV++V HGSR ++ ++R++ + V M ++ PSI +A G
Sbjct: 10 KIGVLLVGHGSRLPYGEEVINGIADIYRQEADHP-VAVGFMNMSRPSIPEAINELAAMGV 68
Query: 186 NRVIVSPFFLFPGRHWCQDIPSLTA---------------EAAKEHPGVPYIVTAPLGLH 230
++IV+P FL G H DIP + E + + T PLG
Sbjct: 69 EKIIVTPVFLAHGVHTKHDIPHILGLDNGAEGHHHHEHEHEHEEFEFDGEIVYTEPLGAD 128
Query: 231 EQLVDVVNDRIKHCL 245
++ +++ DR+K +
Sbjct: 129 PRIAEIIRDRVKSAI 143
>sp|Q980A7|CBIX_SULSO Sirohydrochlorin cobaltochelatase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=cbiX
PE=3 SV=1
Length = 128
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 128 GVIIVDHGSRR---RESNLMLKQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQG 184
GV++V HGS+ ++ + ++++ + + +VE +E +P++ +A + + +G
Sbjct: 3 GVLLVLHGSKIPEWKDVGIKYAEYLSKY-----FSLVEFGFLEFNKPTLSEALSNLLAKG 57
Query: 185 ANRVIVSPFFLFPGRHWCQDIPSLTA----EAAKEHPG--VPYIVTAPLGLHEQLVDVVN 238
A++++V P G H+ +DIP L E + G + + PLG E++ +V+
Sbjct: 58 ADKIVVVPLLFATGTHFRRDIPRLLGIDNDEKKIRYMGREIEITIADPLGFDEKIGEVLV 117
Query: 239 DRIKHC 244
R+
Sbjct: 118 KRVNET 123
>sp|Q6MHT3|HEMH_BDEBA Ferrochelatase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 /
DSM 50701 / NCIB 9529 / HD100) GN=hemH PE=3 SV=1
Length = 335
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 146 KQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVIVSPFF 194
++F A+ +E+ V ++ +EPS++ A Q G + ++V+P F
Sbjct: 79 RRFAALLQEELKDQFVVKVGLQYSEPSVESALKDLQQAGVDEILVAPMF 127
>sp|Q0CU99|TOF1_ASPTN Topoisomerase 1-associated factor 1 OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=tof1 PE=3 SV=1
Length = 1147
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 146 KQFVAMFREKTGYLIVEPAHMELAEPSIKDAFGSCVQQGANRVI 189
KQ +++ R L+V P E E IK G+ V+ G NR++
Sbjct: 733 KQTISVTRRPPAELVVNPNDAETTEDKIKIVIGALVKDGKNRLV 776
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,687,678
Number of Sequences: 539616
Number of extensions: 4339114
Number of successful extensions: 10152
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10112
Number of HSP's gapped (non-prelim): 29
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)