Query 023829
Match_columns 276
No_of_seqs 169 out of 1203
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 06:57:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023829.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023829hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 6.9E-41 1.5E-45 302.8 7.7 168 89-275 84-252 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 6.2E-38 1.4E-42 266.4 14.8 161 94-274 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 6.9E-36 1.5E-40 251.1 14.1 156 95-275 1-158 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 2.3E-35 4.9E-40 257.5 13.6 149 92-275 19-184 (195)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 2.2E-29 4.8E-34 212.9 12.8 143 93-250 5-154 (156)
6 KOG2832 TFIIF-interacting CTD 100.0 5.1E-28 1.1E-32 224.2 12.7 144 93-272 188-331 (393)
7 smart00577 CPDc catalytic doma 99.9 3.3E-27 7.2E-32 197.3 12.9 147 93-257 1-148 (148)
8 COG5190 FCP1 TFIIF-interacting 99.9 1.1E-23 2.4E-28 199.5 7.4 172 83-275 201-374 (390)
9 KOG0323 TFIIF-interacting CTD 99.7 8.4E-17 1.8E-21 160.4 10.8 150 94-251 146-298 (635)
10 COG0637 Predicted phosphatase/ 99.2 4E-12 8.7E-17 113.0 0.5 100 152-251 85-187 (221)
11 PLN03243 haloacid dehalogenase 99.2 1.2E-11 2.6E-16 112.7 3.1 99 152-250 108-209 (260)
12 PLN02770 haloacid dehalogenase 99.1 2.5E-11 5.4E-16 109.3 3.3 99 152-250 107-208 (248)
13 PRK11587 putative phosphatase; 99.1 3.3E-11 7.2E-16 106.0 3.5 99 152-251 82-183 (218)
14 PRK13288 pyrophosphatase PpaX; 99.1 5.1E-11 1.1E-15 104.2 4.3 97 152-248 81-180 (214)
15 TIGR01685 MDP-1 magnesium-depe 99.1 9.8E-11 2.1E-15 100.9 6.0 103 151-253 43-160 (174)
16 PRK14988 GMP/IMP nucleotidase; 99.1 6.8E-11 1.5E-15 105.1 3.1 94 152-245 92-188 (224)
17 PLN02575 haloacid dehalogenase 99.1 5.4E-11 1.2E-15 113.8 2.6 99 152-250 215-316 (381)
18 PRK10725 fructose-1-P/6-phosph 99.1 4.1E-11 8.9E-16 102.2 1.1 96 153-249 88-185 (188)
19 PRK13226 phosphoglycolate phos 99.0 1.8E-10 3.9E-15 102.4 4.2 97 152-248 94-193 (229)
20 TIGR01422 phosphonatase phosph 99.0 1.3E-10 2.7E-15 104.5 2.9 102 152-253 98-204 (253)
21 TIGR01449 PGP_bact 2-phosphogl 99.0 2.1E-10 4.5E-15 99.6 3.8 99 152-250 84-185 (213)
22 TIGR01454 AHBA_synth_RP 3-amin 99.0 1.2E-10 2.6E-15 101.2 1.8 97 152-248 74-173 (205)
23 TIGR01993 Pyr-5-nucltdase pyri 99.0 1.1E-10 2.4E-15 99.8 1.2 93 152-246 83-181 (184)
24 TIGR02253 CTE7 HAD superfamily 99.0 1.9E-10 4.1E-15 100.6 2.6 98 152-249 93-194 (221)
25 TIGR02009 PGMB-YQAB-SF beta-ph 99.0 1.3E-10 2.8E-15 98.6 1.0 93 152-246 87-182 (185)
26 TIGR01509 HAD-SF-IA-v3 haloaci 99.0 1.3E-10 2.9E-15 97.9 1.0 94 152-246 84-180 (183)
27 PRK13225 phosphoglycolate phos 99.0 4.1E-10 8.9E-15 103.4 4.1 96 152-248 141-237 (273)
28 PF13419 HAD_2: Haloacid dehal 98.9 8.5E-11 1.8E-15 97.1 -1.1 96 151-246 75-173 (176)
29 TIGR01681 HAD-SF-IIIC HAD-supe 98.9 6.9E-10 1.5E-14 90.6 4.2 82 153-236 29-121 (128)
30 TIGR03351 PhnX-like phosphonat 98.9 4.7E-10 1E-14 98.2 2.9 95 152-246 86-186 (220)
31 PRK10826 2-deoxyglucose-6-phos 98.9 4.4E-10 9.5E-15 98.9 2.6 99 152-250 91-192 (222)
32 PRK09449 dUMP phosphatase; Pro 98.9 5.4E-10 1.2E-14 98.2 2.3 95 152-246 94-192 (224)
33 PRK10563 6-phosphogluconate ph 98.9 6.3E-10 1.4E-14 97.6 2.4 96 152-249 87-185 (221)
34 TIGR02254 YjjG/YfnB HAD superf 98.9 4.6E-10 1E-14 97.9 1.2 98 152-249 96-197 (224)
35 PLN02940 riboflavin kinase 98.9 5.1E-10 1.1E-14 107.3 1.4 99 152-250 92-194 (382)
36 PRK13478 phosphonoacetaldehyde 98.9 1.2E-09 2.5E-14 99.2 3.6 101 152-252 100-205 (267)
37 PRK13223 phosphoglycolate phos 98.9 1.7E-09 3.6E-14 99.0 4.3 95 152-246 100-197 (272)
38 PLN02779 haloacid dehalogenase 98.8 1.8E-09 3.9E-14 99.6 3.9 100 152-252 143-248 (286)
39 TIGR02247 HAD-1A3-hyp Epoxide 98.8 5.4E-10 1.2E-14 97.4 0.3 99 152-250 93-196 (211)
40 TIGR01662 HAD-SF-IIIA HAD-supe 98.8 1.1E-08 2.3E-13 82.9 7.7 93 152-246 24-127 (132)
41 TIGR01990 bPGM beta-phosphoglu 98.8 7.9E-10 1.7E-14 93.8 0.8 93 153-247 87-182 (185)
42 TIGR02252 DREG-2 REG-2-like, H 98.8 1.4E-09 3.1E-14 94.1 2.4 92 153-245 105-200 (203)
43 TIGR01656 Histidinol-ppas hist 98.8 6.8E-09 1.5E-13 86.3 5.1 94 152-247 26-142 (147)
44 TIGR01548 HAD-SF-IA-hyp1 haloa 98.8 4.6E-09 9.9E-14 90.9 3.7 82 154-236 107-191 (197)
45 PRK13222 phosphoglycolate phos 98.8 8.1E-09 1.8E-13 90.3 5.1 96 152-247 92-190 (226)
46 PRK09456 ?-D-glucose-1-phospha 98.8 2.5E-09 5.4E-14 92.8 1.7 99 152-250 83-185 (199)
47 PRK06698 bifunctional 5'-methy 98.8 4.3E-09 9.3E-14 103.0 3.5 95 152-248 329-425 (459)
48 TIGR01549 HAD-SF-IA-v1 haloaci 98.8 3.4E-09 7.5E-14 87.6 2.2 83 152-237 63-148 (154)
49 TIGR00213 GmhB_yaeD D,D-heptos 98.7 2.3E-08 4.9E-13 85.5 7.0 93 152-246 25-146 (176)
50 TIGR00338 serB phosphoserine p 98.7 2.2E-08 4.7E-13 87.6 6.5 98 152-250 84-194 (219)
51 cd01427 HAD_like Haloacid deha 98.7 1.3E-08 2.8E-13 80.1 4.2 89 152-240 23-130 (139)
52 PHA02597 30.2 hypothetical pro 98.7 2.1E-09 4.6E-14 92.8 -0.3 99 152-253 73-177 (197)
53 COG4996 Predicted phosphatase 98.7 5.1E-08 1.1E-12 79.9 7.4 150 96-269 2-161 (164)
54 PHA03398 viral phosphatase sup 98.7 2.5E-07 5.3E-12 85.7 12.8 124 93-258 127-285 (303)
55 TIGR01261 hisB_Nterm histidino 98.7 5.3E-08 1.2E-12 82.7 7.0 98 152-251 28-148 (161)
56 PRK08942 D,D-heptose 1,7-bisph 98.6 1E-07 2.2E-12 81.7 7.6 95 152-248 28-145 (181)
57 COG0546 Gph Predicted phosphat 98.6 2.1E-08 4.6E-13 88.7 3.1 99 152-250 88-189 (220)
58 TIGR01684 viral_ppase viral ph 98.6 1.6E-07 3.4E-12 86.9 8.1 124 93-258 125-283 (301)
59 PLN02919 haloacid dehalogenase 98.6 2.7E-08 6E-13 106.4 3.3 99 154-252 162-264 (1057)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 1.8E-07 3.9E-12 80.2 6.6 96 152-247 79-187 (201)
61 TIGR01664 DNA-3'-Pase DNA 3'-p 98.5 4.5E-07 9.8E-12 77.3 8.2 91 154-246 43-158 (166)
62 TIGR01686 FkbH FkbH-like domai 98.5 1.8E-07 3.8E-12 87.6 6.1 82 154-238 32-118 (320)
63 PHA02530 pseT polynucleotide k 98.5 1.3E-07 2.8E-12 86.9 5.1 131 93-253 157-299 (300)
64 TIGR01672 AphA HAD superfamily 98.5 4.2E-07 9.1E-12 82.0 7.5 90 154-248 115-209 (237)
65 PF12689 Acid_PPase: Acid Phos 98.4 6.1E-07 1.3E-11 77.1 6.5 83 151-237 43-138 (169)
66 PRK06769 hypothetical protein; 98.4 4.8E-07 1E-11 77.4 4.8 99 152-250 27-137 (173)
67 PRK09552 mtnX 2-hydroxy-3-keto 98.3 8.4E-07 1.8E-11 78.2 5.7 95 152-247 73-184 (219)
68 TIGR01489 DKMTPPase-SF 2,3-dik 98.3 2.9E-06 6.2E-11 71.8 7.7 93 152-244 71-183 (188)
69 TIGR01428 HAD_type_II 2-haloal 98.3 8.7E-07 1.9E-11 76.4 4.2 97 152-248 91-190 (198)
70 KOG3109 Haloacid dehalogenase- 98.2 3.6E-07 7.7E-12 80.9 0.7 92 152-244 99-199 (244)
71 PRK13582 thrH phosphoserine ph 98.2 1.1E-06 2.4E-11 75.9 3.7 95 152-246 67-167 (205)
72 TIGR01668 YqeG_hyp_ppase HAD s 98.2 1.8E-06 3.9E-11 73.7 4.1 113 93-253 24-139 (170)
73 PRK05446 imidazole glycerol-ph 98.1 7.1E-06 1.5E-10 78.2 7.5 124 93-249 1-147 (354)
74 KOG2914 Predicted haloacid-hal 98.1 4.5E-07 9.8E-12 81.0 -1.6 99 152-250 91-196 (222)
75 PRK11009 aphA acid phosphatase 98.1 3.5E-06 7.5E-11 76.1 4.1 87 152-247 113-208 (237)
76 TIGR01663 PNK-3'Pase polynucle 98.0 2.9E-05 6.4E-10 77.5 9.2 112 92-235 166-296 (526)
77 PLN02954 phosphoserine phospha 98.0 2.5E-05 5.5E-10 68.4 7.7 92 152-245 83-191 (224)
78 TIGR01670 YrbI-phosphatas 3-de 98.0 4.6E-06 1E-10 70.0 2.9 85 152-245 29-114 (154)
79 COG5190 FCP1 TFIIF-interacting 97.9 1.3E-05 2.8E-10 76.9 4.6 146 90-248 22-172 (390)
80 TIGR01691 enolase-ppase 2,3-di 97.8 1.1E-05 2.3E-10 72.1 3.1 97 152-248 94-194 (220)
81 PF05152 DUF705: Protein of un 97.8 0.00014 3E-09 66.9 10.3 102 154-257 143-278 (297)
82 TIGR02137 HSK-PSP phosphoserin 97.8 1.8E-05 4E-10 69.6 4.5 91 152-245 67-166 (203)
83 PRK11133 serB phosphoserine ph 97.8 2.9E-05 6.2E-10 73.1 5.9 95 152-247 180-288 (322)
84 COG1011 Predicted hydrolase (H 97.8 2E-05 4.4E-10 68.8 4.6 94 152-245 98-194 (229)
85 PLN02811 hydrolase 97.8 2.2E-05 4.7E-10 69.2 4.5 99 152-250 77-184 (220)
86 TIGR01488 HAD-SF-IB Haloacid D 97.6 0.0002 4.3E-09 60.0 6.7 84 152-235 72-170 (177)
87 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.5 0.00017 3.8E-09 64.5 6.2 78 154-234 25-106 (242)
88 PRK09484 3-deoxy-D-manno-octul 97.4 5.3E-05 1.2E-09 65.3 1.6 78 162-246 57-135 (183)
89 PRK08238 hypothetical protein; 97.4 0.00039 8.5E-09 68.9 7.9 79 153-236 72-152 (479)
90 TIGR01493 HAD-SF-IA-v2 Haloaci 97.4 3.8E-05 8.2E-10 64.7 0.5 79 152-236 89-169 (175)
91 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0004 8.7E-09 64.1 5.9 86 152-237 120-225 (277)
92 COG0560 SerB Phosphoserine pho 97.3 0.00035 7.5E-09 62.0 4.7 87 152-238 76-175 (212)
93 TIGR01533 lipo_e_P4 5'-nucleot 97.3 0.0012 2.7E-08 60.6 8.3 80 152-236 117-201 (266)
94 PRK10748 flavin mononucleotide 97.2 0.00019 4E-09 64.2 2.6 91 152-247 112-205 (238)
95 PF08645 PNK3P: Polynucleotide 97.2 0.0014 3.1E-08 55.5 7.5 84 152-235 28-130 (159)
96 PTZ00445 p36-lilke protein; Pr 97.1 0.00032 7E-09 62.2 2.7 134 90-250 39-205 (219)
97 COG2179 Predicted hydrolase of 97.0 0.0018 4E-08 55.4 5.9 135 90-272 24-165 (175)
98 COG0241 HisB Histidinol phosph 97.0 0.002 4.2E-08 56.0 6.2 85 153-237 31-136 (181)
99 PF13344 Hydrolase_6: Haloacid 96.9 0.0019 4E-08 50.6 5.5 40 154-193 15-55 (101)
100 TIGR02726 phenyl_P_delta pheny 96.7 0.0012 2.6E-08 56.6 2.8 117 93-248 6-123 (169)
101 PRK11590 hypothetical protein; 96.6 0.0033 7.1E-08 55.2 5.3 39 152-190 94-134 (211)
102 PRK00192 mannosyl-3-phosphogly 96.5 0.0058 1.3E-07 55.6 6.5 59 93-193 3-62 (273)
103 TIGR01689 EcbF-BcbF capsule bi 96.5 0.01 2.2E-07 48.6 7.2 49 154-202 25-87 (126)
104 TIGR03333 salvage_mtnX 2-hydro 96.5 0.0046 1E-07 54.2 5.3 93 152-244 69-177 (214)
105 PF09419 PGP_phosphatase: Mito 96.4 0.013 2.9E-07 50.3 7.4 96 90-234 37-147 (168)
106 COG3882 FkbH Predicted enzyme 96.3 0.0038 8.2E-08 61.4 4.1 92 158-250 260-355 (574)
107 COG0561 Cof Predicted hydrolas 96.3 0.01 2.3E-07 53.3 6.6 59 93-193 2-61 (264)
108 PF06941 NT5C: 5' nucleotidase 96.3 0.0011 2.4E-08 57.2 0.1 82 152-249 72-161 (191)
109 TIGR01487 SPP-like sucrose-pho 96.1 0.016 3.6E-07 50.5 6.4 39 155-193 20-59 (215)
110 PRK10444 UMP phosphatase; Prov 96.0 0.014 3E-07 52.9 6.0 40 154-193 18-58 (248)
111 COG4359 Uncharacterized conser 95.9 0.041 9E-07 48.0 8.0 43 152-194 72-115 (220)
112 PRK10513 sugar phosphate phosp 95.9 0.028 6.1E-07 50.6 7.4 37 156-192 23-60 (270)
113 PRK01158 phosphoglycolate phos 95.9 0.023 5E-07 49.7 6.6 38 156-193 23-61 (230)
114 PLN02645 phosphoglycolate phos 95.8 0.02 4.3E-07 53.4 5.9 37 156-192 47-84 (311)
115 TIGR02461 osmo_MPG_phos mannos 95.8 0.023 5E-07 50.6 6.1 37 156-192 18-55 (225)
116 PF08282 Hydrolase_3: haloacid 95.7 0.025 5.3E-07 49.1 5.9 38 155-192 17-55 (254)
117 TIGR00099 Cof-subfamily Cof su 95.6 0.028 6E-07 50.3 6.0 37 156-192 19-56 (256)
118 TIGR02463 MPGP_rel mannosyl-3- 95.6 0.031 6.7E-07 48.8 6.1 35 158-192 21-56 (221)
119 PF06888 Put_Phosphatase: Puta 95.6 0.046 1E-06 49.4 7.3 54 152-205 70-126 (234)
120 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.6 0.024 5.1E-07 51.5 5.5 37 154-190 22-59 (257)
121 PRK15126 thiamin pyrimidine py 95.5 0.032 6.9E-07 50.5 6.3 15 94-108 2-16 (272)
122 PRK10530 pyridoxal phosphate ( 95.5 0.04 8.7E-07 49.4 6.7 15 94-108 3-17 (272)
123 TIGR01545 YfhB_g-proteo haloac 95.4 0.031 6.8E-07 49.3 5.7 37 153-189 94-132 (210)
124 TIGR01452 PGP_euk phosphoglyco 95.4 0.037 7.9E-07 50.7 6.2 36 154-189 19-55 (279)
125 PRK03669 mannosyl-3-phosphogly 95.4 0.04 8.6E-07 50.1 6.4 58 93-192 6-64 (271)
126 PRK10976 putative hydrolase; P 95.4 0.041 8.8E-07 49.5 6.3 15 94-108 2-16 (266)
127 PRK12702 mannosyl-3-phosphogly 95.2 0.045 9.6E-07 51.1 6.2 36 158-193 23-59 (302)
128 smart00775 LNS2 LNS2 domain. T 95.2 0.046 1E-06 46.1 5.8 36 154-189 28-67 (157)
129 TIGR01456 CECR5 HAD-superfamil 95.0 0.039 8.4E-07 51.8 5.2 35 155-189 18-61 (321)
130 TIGR01457 HAD-SF-IIA-hyp2 HAD- 94.9 0.058 1.3E-06 48.7 6.0 35 155-189 19-54 (249)
131 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.9 0.022 4.8E-07 48.8 3.0 91 153-243 87-191 (202)
132 KOG3085 Predicted hydrolase (H 94.8 0.013 2.8E-07 53.0 1.5 94 155-249 115-212 (237)
133 TIGR01486 HAD-SF-IIB-MPGP mann 94.8 0.056 1.2E-06 48.5 5.4 36 157-192 20-56 (256)
134 TIGR01482 SPP-subfamily Sucros 94.7 0.067 1.4E-06 46.5 5.6 33 158-190 20-53 (225)
135 COG4502 5'(3')-deoxyribonucleo 94.7 0.11 2.3E-06 43.7 6.3 83 152-250 67-154 (180)
136 COG0647 NagD Predicted sugar p 94.4 0.075 1.6E-06 49.0 5.5 38 154-191 25-63 (269)
137 TIGR01484 HAD-SF-IIB HAD-super 94.4 0.081 1.8E-06 45.5 5.4 37 154-190 18-55 (204)
138 TIGR01460 HAD-SF-IIA Haloacid 94.3 0.075 1.6E-06 47.5 5.2 35 155-189 16-51 (236)
139 PTZ00174 phosphomannomutase; P 94.0 0.13 2.8E-06 46.2 6.1 15 94-108 5-19 (247)
140 KOG3120 Predicted haloacid deh 94.0 0.016 3.6E-07 51.8 0.1 54 154-207 85-140 (256)
141 PRK14502 bifunctional mannosyl 93.2 0.31 6.7E-06 50.4 7.8 60 91-192 413-473 (694)
142 PF11019 DUF2608: Protein of u 92.9 0.18 4E-06 45.9 5.2 100 152-251 80-210 (252)
143 PLN02423 phosphomannomutase 92.7 0.25 5.3E-06 44.6 5.7 16 93-108 6-21 (245)
144 PLN02887 hydrolase family prot 92.6 0.24 5.3E-06 50.4 6.1 57 93-191 307-364 (580)
145 TIGR01675 plant-AP plant acid 92.6 0.33 7.1E-06 43.8 6.3 49 154-202 121-172 (229)
146 TIGR01485 SPP_plant-cyano sucr 92.2 0.22 4.7E-06 44.6 4.7 37 155-191 23-60 (249)
147 COG2503 Predicted secreted aci 91.9 0.29 6.3E-06 44.6 5.1 40 153-192 122-163 (274)
148 TIGR01511 ATPase-IB1_Cu copper 91.7 0.33 7.2E-06 49.1 5.9 84 153-246 405-489 (562)
149 PRK10187 trehalose-6-phosphate 91.4 0.38 8.2E-06 43.9 5.4 35 155-189 38-74 (266)
150 PF03767 Acid_phosphat_B: HAD 90.7 0.27 5.8E-06 44.1 3.6 41 153-193 115-156 (229)
151 PF00702 Hydrolase: haloacid d 89.9 0.62 1.3E-05 39.6 5.1 77 153-234 127-206 (215)
152 TIGR01680 Veg_Stor_Prot vegeta 89.8 1.3 2.8E-05 41.0 7.3 86 154-239 146-238 (275)
153 TIGR02244 HAD-IG-Ncltidse HAD 89.7 0.5 1.1E-05 45.1 4.7 54 149-202 180-242 (343)
154 PRK10748 flavin mononucleotide 89.5 0.2 4.2E-06 44.7 1.8 16 94-109 10-25 (238)
155 COG4229 Predicted enolase-phos 88.8 0.31 6.8E-06 42.7 2.4 95 151-246 101-200 (229)
156 PLN02151 trehalose-phosphatase 87.6 0.88 1.9E-05 43.6 4.9 34 154-187 121-154 (354)
157 TIGR01428 HAD_type_II 2-haloal 87.3 0.3 6.5E-06 41.7 1.4 15 95-109 2-16 (198)
158 TIGR01493 HAD-SF-IA-v2 Haloaci 87.2 0.28 6.1E-06 40.9 1.2 13 97-109 2-14 (175)
159 PLN03017 trehalose-phosphatase 87.0 1 2.3E-05 43.3 5.0 32 155-186 135-166 (366)
160 TIGR01525 ATPase-IB_hvy heavy 86.8 0.54 1.2E-05 47.4 3.1 85 153-246 384-470 (556)
161 TIGR01512 ATPase-IB2_Cd heavy 86.8 0.39 8.5E-06 48.2 2.1 84 153-245 362-447 (536)
162 TIGR00685 T6PP trehalose-phosp 86.0 1 2.3E-05 40.2 4.2 15 93-107 2-16 (244)
163 PLN02580 trehalose-phosphatase 85.8 1.5 3.2E-05 42.5 5.4 61 91-188 116-176 (384)
164 KOG1615 Phosphoserine phosphat 83.5 3.6 7.8E-05 36.5 6.3 88 152-240 87-190 (227)
165 COG1877 OtsB Trehalose-6-phosp 83.5 2.2 4.8E-05 39.3 5.2 60 91-187 15-76 (266)
166 PRK14501 putative bifunctional 82.3 2.1 4.5E-05 44.6 5.2 35 155-189 516-552 (726)
167 KOG4549 Magnesium-dependent ph 81.5 7.8 0.00017 32.1 7.1 80 152-235 43-134 (144)
168 COG3769 Predicted hydrolase (H 80.5 4.7 0.0001 36.5 5.9 34 160-193 30-64 (274)
169 PF08235 LNS2: LNS2 (Lipin/Ned 79.9 3.9 8.5E-05 34.8 5.1 37 153-189 27-64 (157)
170 TIGR01459 HAD-SF-IIA-hyp4 HAD- 78.5 0.2 4.4E-06 44.6 -3.3 90 155-245 140-236 (242)
171 PLN02382 probable sucrose-phos 78.4 4.4 9.6E-05 39.5 5.7 17 92-108 7-23 (413)
172 TIGR02471 sucr_syn_bact_C sucr 78.2 2.5 5.3E-05 37.3 3.6 13 96-108 1-13 (236)
173 PF05116 S6PP: Sucrose-6F-phos 76.5 4.1 8.9E-05 36.7 4.5 13 94-106 2-14 (247)
174 PF12710 HAD: haloacid dehalog 75.1 5.7 0.00012 33.1 4.9 45 155-199 87-138 (192)
175 PLN02177 glycerol-3-phosphate 74.4 2.8 6E-05 42.0 3.1 38 167-204 121-171 (497)
176 PF05822 UMPH-1: Pyrimidine 5' 73.8 3.6 7.9E-05 37.5 3.5 87 151-237 88-193 (246)
177 COG1011 Predicted hydrolase (H 73.2 2.1 4.6E-05 36.9 1.8 16 93-108 3-18 (229)
178 PLN02205 alpha,alpha-trehalose 72.4 6.4 0.00014 42.1 5.4 16 93-108 595-610 (854)
179 TIGR01458 HAD-SF-IIA-hyp3 HAD- 70.0 0.33 7.1E-06 44.0 -4.2 38 211-248 184-222 (257)
180 PRK10671 copA copper exporting 67.9 3.8 8.2E-05 43.4 2.6 84 154-246 651-735 (834)
181 PF12710 HAD: haloacid dehalog 66.9 3.1 6.6E-05 34.8 1.4 13 97-109 1-13 (192)
182 PLN03063 alpha,alpha-trehalose 65.1 12 0.00026 39.7 5.6 34 154-187 533-568 (797)
183 PF02358 Trehalose_PPase: Treh 64.0 10 0.00023 33.4 4.3 33 153-185 19-53 (235)
184 PRK01122 potassium-transportin 62.2 6.4 0.00014 41.0 2.9 40 154-193 446-486 (679)
185 TIGR01490 HAD-SF-IB-hyp1 HAD-s 61.5 4 8.7E-05 34.7 1.1 12 97-108 2-13 (202)
186 PRK14010 potassium-transportin 58.7 7.5 0.00016 40.4 2.7 41 154-194 442-483 (673)
187 TIGR01497 kdpB K+-transporting 58.3 7.4 0.00016 40.5 2.6 41 154-194 447-488 (675)
188 PLN03064 alpha,alpha-trehalose 55.3 24 0.00052 38.2 5.8 37 153-189 622-660 (934)
189 cd06539 CIDE_N_A CIDE_N domain 54.7 22 0.00047 26.8 3.9 15 94-108 40-54 (78)
190 cd06537 CIDE_N_B CIDE_N domain 54.6 19 0.00041 27.3 3.6 16 93-108 38-53 (81)
191 PF00702 Hydrolase: haloacid d 53.3 8.3 0.00018 32.5 1.7 14 95-108 2-15 (215)
192 cd01615 CIDE_N CIDE_N domain, 48.8 29 0.00064 26.1 3.8 16 93-108 39-54 (78)
193 KOG2134 Polynucleotide kinase 48.3 23 0.00049 34.5 3.9 16 93-108 74-89 (422)
194 smart00266 CAD Domains present 48.1 30 0.00065 25.8 3.7 15 94-108 38-52 (74)
195 cd06536 CIDE_N_ICAD CIDE_N dom 47.3 31 0.00067 26.1 3.7 16 93-108 41-56 (80)
196 cd06538 CIDE_N_FSP27 CIDE_N do 46.6 29 0.00062 26.2 3.4 15 94-108 39-53 (79)
197 KOG3040 Predicted sugar phosph 45.7 31 0.00068 31.1 4.1 86 154-239 24-125 (262)
198 KOG3107 Predicted haloacid deh 45.2 24 0.00052 34.4 3.5 13 95-107 198-210 (468)
199 PF04312 DUF460: Protein of un 41.0 1E+02 0.0022 25.7 6.2 12 98-109 47-58 (138)
200 TIGR01452 PGP_euk phosphoglyco 40.6 2.6 5.7E-05 38.4 -3.6 93 154-246 144-243 (279)
201 PLN02499 glycerol-3-phosphate 40.5 19 0.00042 36.1 2.2 36 169-204 109-157 (498)
202 PF02017 CIDE-N: CIDE-N domain 39.8 16 0.00036 27.4 1.2 16 93-108 39-54 (78)
203 cd02514 GT13_GLCNAC-TI GT13_GL 34.9 38 0.00083 32.2 3.2 39 151-189 7-52 (334)
204 TIGR03333 salvage_mtnX 2-hydro 34.0 20 0.00043 31.1 1.1 12 97-108 2-13 (214)
205 PF08484 Methyltransf_14: C-me 29.5 1.3E+02 0.0029 25.3 5.4 45 154-200 53-99 (160)
206 KOG3189 Phosphomannomutase [Li 27.9 89 0.0019 28.1 4.0 16 93-108 10-25 (252)
207 KOG3128 Uncharacterized conser 27.8 61 0.0013 30.0 3.1 37 152-188 137-174 (298)
208 PF13242 Hydrolase_like: HAD-h 27.5 10 0.00023 27.2 -1.6 49 211-259 9-58 (75)
209 PRK11033 zntA zinc/cadmium/mer 26.9 79 0.0017 33.3 4.2 74 153-237 568-642 (741)
210 KOG2882 p-Nitrophenyl phosphat 25.4 1.3E+02 0.0029 28.3 4.9 35 154-188 39-74 (306)
211 cd06535 CIDE_N_CAD CIDE_N doma 25.2 94 0.002 23.3 3.2 14 94-107 40-53 (77)
212 PF05761 5_nucleotid: 5' nucle 23.9 1.1E+02 0.0024 30.3 4.4 52 149-200 179-240 (448)
213 COG4555 NatA ABC-type Na+ tran 23.8 75 0.0016 28.7 2.8 38 152-189 166-203 (245)
214 TIGR01658 EYA-cons_domain eyes 23.7 43 0.00092 30.8 1.3 12 95-106 3-14 (274)
215 KOG2630 Enolase-phosphatase E- 23.5 49 0.0011 30.1 1.7 93 154-250 124-228 (254)
216 PF13575 DUF4135: Domain of un 21.9 72 0.0016 30.4 2.6 23 7-29 71-96 (370)
217 TIGR01522 ATPase-IIA2_Ca golgi 21.2 1.1E+02 0.0024 32.8 4.1 42 154-195 529-571 (884)
218 COG5083 SMP2 Uncharacterized p 20.5 56 0.0012 32.5 1.5 16 93-108 374-389 (580)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=6.9e-41 Score=302.76 Aligned_cols=168 Identities=41% Similarity=0.587 Sum_probs=143.6
Q ss_pred cccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc
Q 023829 89 EERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF 168 (276)
Q Consensus 89 ~~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ 168 (276)
....+|++|||||||||+||... ++.... ..|.++ +..+| ....+||++|||+++||+.++++
T Consensus 84 ~~~~~kk~lVLDLDeTLvHss~~--~~~~~~--------~d~~~~-----v~~~~--~~~~~yV~kRP~vdeFL~~~s~~ 146 (262)
T KOG1605|consen 84 LATVGRKTLVLDLDETLVHSSLN--LKPIVN--------ADFTVP-----VEIDG--HIHQVYVRKRPHVDEFLSRVSKW 146 (262)
T ss_pred cccCCCceEEEeCCCcccccccc--cCCCCC--------cceeee-----eeeCC--cceEEEEEcCCCHHHHHHHhHHH
Confidence 34568999999999999997421 111111 012221 22332 34578999999999999999999
Q ss_pred ceEEEEccCchhhHHHHHHHhcC-CCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829 169 ADLILFTAGLEGYARPLVDRIDG-ENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 169 yelvI~Ts~~~~yA~~vl~~Ldp-~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~ 247 (276)
||+++|||+.+.||.+|++.||+ .+.|++|+||++|+.. ++.|+|||..+|+|+++||||||+|.+|.+||+|||+|+
T Consensus 147 ~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~-~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~ 225 (262)
T KOG1605|consen 147 YELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLK-DGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIK 225 (262)
T ss_pred HHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeE-CCcEEEEcceeccCcccEEEEcCChHHhccCccCCCccc
Confidence 99999999999999999999999 6789999999999986 589999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHhHHHHHHHHhhhcCCC
Q 023829 248 PFSAGQPHDNQVLTNVTLLKFLLSSLNH 275 (276)
Q Consensus 248 ~f~~g~~~D~eL~~l~~~L~~La~~~d~ 275 (276)
+|. +++.|+||++|+|||++|+.++||
T Consensus 226 sw~-~d~~D~eLL~LlpfLe~L~~~~Dv 252 (262)
T KOG1605|consen 226 SWF-DDPTDTELLKLLPFLEALAFVDDV 252 (262)
T ss_pred ccc-cCCChHHHHHHHHHHHHhcccccH
Confidence 998 788999999999999999999776
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=6.2e-38 Score=266.40 Aligned_cols=161 Identities=43% Similarity=0.639 Sum_probs=137.7
Q ss_pred ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEE
Q 023829 94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173 (276)
Q Consensus 94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelvI 173 (276)
|++|||||||||||+..... .. .+ .|.+.+. ..| ...++|+++|||+++||++|+++|+++|
T Consensus 1 k~~lvlDLDeTLi~~~~~~~----~~----~~---~~~~~~~-----~~~--~~~~~~v~~RPgl~eFL~~l~~~yei~I 62 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMP----KV----DA---DFKVPVL-----IDG--KIIPVYVFKRPHVDEFLERVSKWYELVI 62 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCC----CC----CC---ceEEEEE-----ecC--cEEEEEEEECCCHHHHHHHHHhcCEEEE
Confidence 68999999999999853211 00 11 1211111 111 2457899999999999999999999999
Q ss_pred EccCchhhHHHHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCC
Q 023829 174 FTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG 252 (276)
Q Consensus 174 ~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g 252 (276)
||++.+.||++++++||+.+ +|.++++|++|...+ +.+.|+|+.+|+++++||+|||++..|..+++|||+|.+|. |
T Consensus 63 ~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~-~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~-~ 140 (162)
T TIGR02251 63 FTASLEEYADPVLDILDRGGKVISRRLYRESCVFTN-GKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF-G 140 (162)
T ss_pred EcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeC-CCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC-C
Confidence 99999999999999999987 899999999998765 45999999999999999999999999999999999999998 8
Q ss_pred CCCChHHhHHHHHHHHhhhcCC
Q 023829 253 QPHDNQVLTNVTLLKFLLSSLN 274 (276)
Q Consensus 253 ~~~D~eL~~l~~~L~~La~~~d 274 (276)
+.+|++|.+|++||+.|++.+|
T Consensus 141 ~~~D~~L~~l~~~L~~l~~~~~ 162 (162)
T TIGR02251 141 DPNDTELLNLIPFLEGLRFEDD 162 (162)
T ss_pred CCCHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999999876
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=6.9e-36 Score=251.09 Aligned_cols=156 Identities=41% Similarity=0.629 Sum_probs=120.2
Q ss_pred eEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEEE
Q 023829 95 LTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLILF 174 (276)
Q Consensus 95 ~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelvI~ 174 (276)
|+|||||||||||+...+..+.. +.. . .....+++++|||+++||++|+++|+++||
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~------------~~~--------~---~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~ 57 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYD------------FKI--------I---DQRGGYYVKLRPGLDEFLEELSKHYEVVIW 57 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-S------------EEE--------E---TEEEEEEEEE-TTHHHHHHHHHHHCEEEEE
T ss_pred CEEEEeCCCcEEEEeecCCCCcc------------cce--------e---ccccceeEeeCchHHHHHHHHHHhceEEEE
Confidence 68999999999998654322100 000 0 023467899999999999999999999999
Q ss_pred ccCchhhHHHHHHHhcCC-CceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCCC
Q 023829 175 TAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ 253 (276)
Q Consensus 175 Ts~~~~yA~~vl~~Ldp~-~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~ 253 (276)
|++++.||++|++.|+|+ .+|.++++|++|...+ +.+.|||+++|++++++|+|||++.+|..+++|+|.|++|. ++
T Consensus 58 T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~-~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~-~~ 135 (159)
T PF03031_consen 58 TSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDK-GSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFF-GD 135 (159)
T ss_dssp -SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEET-TEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----S-SC
T ss_pred EeehhhhhhHHHHhhhhhccccccccccccccccc-cccccchHHHhhccccEEEEeCCHHHeeccCCceEEecccc-CC
Confidence 999999999999999995 6899999999998665 35589999999999999999999999999999999999998 67
Q ss_pred -CCChHHhHHHHHHHHhhhcCCC
Q 023829 254 -PHDNQVLTNVTLLKFLLSSLNH 275 (276)
Q Consensus 254 -~~D~eL~~l~~~L~~La~~~d~ 275 (276)
++|++|.+|+++|++|++.+||
T Consensus 136 ~~~D~~L~~l~~~L~~l~~~~Dv 158 (159)
T PF03031_consen 136 TPNDRELLRLLPFLEELAKEDDV 158 (159)
T ss_dssp HTT--HHHHHHHHHHHHHTHS-C
T ss_pred CcchhHHHHHHHHHHHhCcccCC
Confidence 8999999999999999999887
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=2.3e-35 Score=257.49 Aligned_cols=149 Identities=23% Similarity=0.282 Sum_probs=123.6
Q ss_pred CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceE
Q 023829 92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADL 171 (276)
Q Consensus 92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yel 171 (276)
.+|++|||||||||+|+.... .+.++.+|||+++||++|+++|||
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~-----------------------------------~~~~~~kRP~l~eFL~~~~~~feI 63 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPA-----------------------------------ETGEELMRPYLHEFLTSAYEDYDI 63 (195)
T ss_pred CCCcEEEEeCCCceEcccccC-----------------------------------CCceEEeCCCHHHHHHHHHhCCEE
Confidence 378999999999999852100 124578999999999999999999
Q ss_pred EEEccCchhhHHHHHHHhcCCC--ceeEEEECCCccc-----cCCc-cccccccccCc------CCCcEEEEEcCccccc
Q 023829 172 ILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTS-----TEYR-EHVKDLSCLSK------DLCRTLIVDNNPFSFL 237 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp~~--~f~~rl~r~~c~~-----~k~~-~~~KdL~~L~r------d~~~~IiVDDsp~~~~ 237 (276)
+||||+++.||+.+++.|+..+ .+...++.++|.. ...+ .++|||+.+|+ +++|||+|||+|.++.
T Consensus 64 vVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~ 143 (195)
T TIGR02245 64 VIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFL 143 (195)
T ss_pred EEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHh
Confidence 9999999999999999997542 3444555577631 1223 36999998853 8899999999999999
Q ss_pred CCCCCeeeeCccCC---CCCCChHHhHHHHHHHHhhhcCCC
Q 023829 238 LQPLNGIPCIPFSA---GQPHDNQVLTNVTLLKFLLSSLNH 275 (276)
Q Consensus 238 ~~p~NgI~V~~f~~---g~~~D~eL~~l~~~L~~La~~~d~ 275 (276)
.||+|||+|++|.. +++.|+||++|++||+.||+.+||
T Consensus 144 ~~P~N~i~I~~f~~~~~~~~~D~eL~~L~~yL~~la~~~Dv 184 (195)
T TIGR02245 144 MNPQNGLKIRPFKKAHANRGTDQELLKLTQYLKTIAELEDF 184 (195)
T ss_pred cCCCCccccCCccccCCCCcccHHHHHHHHHHHHHhcCccc
Confidence 99999999999984 357899999999999999999997
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.96 E-value=2.2e-29 Score=212.94 Aligned_cols=143 Identities=24% Similarity=0.320 Sum_probs=112.1
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhh--h--hcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRN--Q--ATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF 168 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~--~--~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ 168 (276)
+|++||||||+|||||............ + ..+...+.|.+... ...+++++|||+++||+.|++.
T Consensus 5 ~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-----------~~~~~v~~rPgv~efL~~l~~~ 73 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLG-----------TMWYLTKLRPFLHEFLKEASKL 73 (156)
T ss_pred CceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcC-----------CeEEEEEECCCHHHHHHHHHhh
Confidence 7999999999999998764433322110 0 00000011111110 2457899999999999999999
Q ss_pred ceEEEEccCchhhHHHHHHHhcCCC-ceeE-EEECCCccccCCccccccccc-cCcCCCcEEEEEcCcccccCCCCCeee
Q 023829 169 ADLILFTAGLEGYARPLVDRIDGEN-LFSL-RLYRPSTTSTEYREHVKDLSC-LSKDLCRTLIVDNNPFSFLLQPLNGIP 245 (276)
Q Consensus 169 yelvI~Ts~~~~yA~~vl~~Ldp~~-~f~~-rl~r~~c~~~k~~~~~KdL~~-L~rd~~~~IiVDDsp~~~~~~p~NgI~ 245 (276)
|+++|||++.+.||+++++.|||.+ +|.. +++|++|. +.+.|||+. ++++++++|||||++.+|..||+|||+
T Consensus 74 yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~----~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~ 149 (156)
T TIGR02250 74 YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESG----SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQ 149 (156)
T ss_pred cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCC----CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEE
Confidence 9999999999999999999999996 7855 47799985 578999955 589999999999999999999999999
Q ss_pred eCccC
Q 023829 246 CIPFS 250 (276)
Q Consensus 246 V~~f~ 250 (276)
|++|.
T Consensus 150 i~~~~ 154 (156)
T TIGR02250 150 IEPYN 154 (156)
T ss_pred eCCcc
Confidence 99996
No 6
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.95 E-value=5.1e-28 Score=224.17 Aligned_cols=144 Identities=29% Similarity=0.502 Sum_probs=132.8
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI 172 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelv 172 (276)
++.||||||.++|||..|+-. -.+.+++|||++.||.+|+++||||
T Consensus 188 p~yTLVleledvLVhpdws~~----------------------------------tGwRf~kRPgvD~FL~~~a~~yEIV 233 (393)
T KOG2832|consen 188 PPYTLVLELEDVLVHPDWSYK----------------------------------TGWRFKKRPGVDYFLGHLAKYYEIV 233 (393)
T ss_pred CCceEEEEeeeeEeccchhhh----------------------------------cCceeccCchHHHHHHhhcccceEE
Confidence 589999999999999654210 1245889999999999999999999
Q ss_pred EEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCCC
Q 023829 173 LFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAG 252 (276)
Q Consensus 173 I~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g 252 (276)
|||+....++.++++.+||.|+++++++|++|.+. ++.++|||++|+||++++|+||-.++.+.+||+|+|.+++|. |
T Consensus 234 i~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~-~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~-G 311 (393)
T KOG2832|consen 234 VYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYE-EGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWS-G 311 (393)
T ss_pred EEecCCccchhhhHhhcCCcceEEEEEecCccccc-CccchhhhhhhccccceeEEEEccccccccCcccccccCcCC-C
Confidence 99999999999999999999999999999999875 589999999999999999999999999999999999999997 9
Q ss_pred CCCChHHhHHHHHHHHhhhc
Q 023829 253 QPHDNQVLTNVTLLKFLLSS 272 (276)
Q Consensus 253 ~~~D~eL~~l~~~L~~La~~ 272 (276)
+++|+.|.+|++||+.|+..
T Consensus 312 n~dDt~L~dL~~FL~~ia~~ 331 (393)
T KOG2832|consen 312 NDDDTSLFDLLAFLEYIAQQ 331 (393)
T ss_pred CcccchhhhHHHHHHHHHHc
Confidence 99999999999999999864
No 7
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.95 E-value=3.3e-27 Score=197.27 Aligned_cols=147 Identities=40% Similarity=0.545 Sum_probs=120.0
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLI 172 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelv 172 (276)
+|++|||||||||+|+.+.+..+.......+. .........+++++|||+++||++|++.|+++
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~ 64 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVP----------------VLIDGHPHGVYVKKRPGVDEFLKRASELFELV 64 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEE----------------EEeCCceEEEEEEECCCHHHHHHHHHhccEEE
Confidence 58999999999999986533222111111111 11112345678999999999999999889999
Q ss_pred EEccCchhhHHHHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCC
Q 023829 173 LFTAGLEGYARPLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA 251 (276)
Q Consensus 173 I~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~ 251 (276)
|||++.++|++.+++++++.+ +|..++++++|...|+. |.|+|+++|.++++||+|||++..+..++.|||.|++|.
T Consensus 65 I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~- 142 (148)
T smart00577 65 VFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWF- 142 (148)
T ss_pred EEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcC-
Confidence 999999999999999999965 56889999999987765 999999999999999999999999999999999999998
Q ss_pred CCCCCh
Q 023829 252 GQPHDN 257 (276)
Q Consensus 252 g~~~D~ 257 (276)
|+++|+
T Consensus 143 ~~~~d~ 148 (148)
T smart00577 143 GDPDDT 148 (148)
T ss_pred CCCCCC
Confidence 777663
No 8
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.89 E-value=1.1e-23 Score=199.52 Aligned_cols=172 Identities=34% Similarity=0.448 Sum_probs=144.4
Q ss_pred CCCccccccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHH
Q 023829 83 GDDVVSEERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFL 162 (276)
Q Consensus 83 ~~~~~~~~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL 162 (276)
..+...++...++++++|||+||+|+..... . . ..|.. ..++......+|+..|||+++|+
T Consensus 201 l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~-----~--~-----~df~~-------~~e~~~~~~~~~v~kRp~l~~fl 261 (390)
T COG5190 201 LEPPVSKSTSPKKTLVLDLDETLVHSSFRYI-----T--L-----LDFLV-------KVEISLLQHLVYVSKRPELDYFL 261 (390)
T ss_pred ccchhhcCCCCccccccCCCccceeeccccc-----c--c-----cchhh-------ccccccceeEEEEcCChHHHHHH
Confidence 3344557778899999999999999743211 0 0 00211 11222233578899999999999
Q ss_pred HHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCC
Q 023829 163 KQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLN 242 (276)
Q Consensus 163 ~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~N 242 (276)
..+++.|++++||++.+.|+++|++.|++.+.|++++||.+|.... +.|+|||..+++++..+|+||++|.+|.++|+|
T Consensus 262 ~~ls~~~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~~~-G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~ 340 (390)
T COG5190 262 GKLSKIHELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVSYL-GVYIKDISKIGRSLDKVIIIDNSPASYEFHPEN 340 (390)
T ss_pred hhhhhhEEEEEEecchhhhcchHHHhccccceeehhhhcccceecc-CchhhhHHhhccCCCceEEeeCChhhhhhCccc
Confidence 9999999999999999999999999999999999999999999875 569999999999999999999999999999999
Q ss_pred eeeeCccCCCCCCChHHhHHHHHHHHhhh--cCCC
Q 023829 243 GIPCIPFSAGQPHDNQVLTNVTLLKFLLS--SLNH 275 (276)
Q Consensus 243 gI~V~~f~~g~~~D~eL~~l~~~L~~La~--~~d~ 275 (276)
+|++++|. +++.|++|++++++|+.|+. ..||
T Consensus 341 ~i~i~~W~-~d~~d~el~~ll~~le~L~~~~~~d~ 374 (390)
T COG5190 341 AIPIEKWI-SDEHDDELLNLLPFLEDLPDRDLKDV 374 (390)
T ss_pred eeccCccc-ccccchhhhhhcccccccccccchhh
Confidence 99999997 78899999999999999988 5544
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.69 E-value=8.4e-17 Score=160.41 Aligned_cols=150 Identities=26% Similarity=0.248 Sum_probs=106.7
Q ss_pred ceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcceEEE
Q 023829 94 KLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFADLIL 173 (276)
Q Consensus 94 k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~yelvI 173 (276)
++.+|+|||.||+|+...+.+-+.......+. +..+....-..+........+|+++|||+++||+.+++.|+|+|
T Consensus 146 ~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~----~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhV 221 (635)
T KOG0323|consen 146 KLHLVLDLDHTLLHTILKSDLSETEKYLKEEA----ESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHV 221 (635)
T ss_pred cceeehhhhhHHHHhhccchhhhhhhhccccc----ccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEE
Confidence 36999999999999865444433322111000 00000000000000011236899999999999999999999999
Q ss_pred EccCchhhHHHHHHHhcCCC-ceeEE-EECCCccccCCccccccccccC-cCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829 174 FTAGLEGYARPLVDRIDGEN-LFSLR-LYRPSTTSTEYREHVKDLSCLS-KDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 174 ~Ts~~~~yA~~vl~~Ldp~~-~f~~r-l~r~~c~~~k~~~~~KdL~~L~-rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
||.|.+.||..|++.|||++ +|..| ++|++-. ..-.+||..++ .+.+++|||||+..+|..++.|.|.|.+|.
T Consensus 222 yTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~----~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 222 YTMGTRDYALEIAKLIDPEGKYFGDRIISRDESP----FFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred EeccchHHHHHHHHHhCCCCccccceEEEecCCC----cccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 99999999999999999997 78766 5677722 23367777764 567889999999999999999999999987
Q ss_pred C
Q 023829 251 A 251 (276)
Q Consensus 251 ~ 251 (276)
+
T Consensus 298 y 298 (635)
T KOG0323|consen 298 Y 298 (635)
T ss_pred c
Confidence 5
No 10
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.18 E-value=4e-12 Score=112.99 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=93.1
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.+||+.|... ..+++-|++.+..++.+++.++...+|..++++++....|+. .|.+.+++||.++++||+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV 164 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence 46899999999999988 999999999999999999999999999999999988877765 799999999999999999
Q ss_pred EEcCcccccCCCCCeeeeCccCC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFSA 251 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~~ 251 (276)
|||++.........|+.|--+..
T Consensus 165 iEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 165 VEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EecchhHHHHHHHCCCEEEEecC
Confidence 99999999988889999998874
No 11
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.17 E-value=1.2e-11 Score=112.71 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=88.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|++. +.++|.|++...+++.+++.++..++|..+++.+++...|+. .|.+.++++|.++++|++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~ 187 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIV 187 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEE
Confidence 45789999999999977 999999999999999999999988899999999887666655 688899999999999999
Q ss_pred EEcCcccccCCCCCeeeeCccC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~ 250 (276)
|+|+...+.....+|+.+..+.
T Consensus 188 IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 188 FGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EcCCHHHHHHHHHcCCEEEEEe
Confidence 9999999988888898776664
No 12
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.13 E-value=2.5e-11 Score=109.30 Aligned_cols=99 Identities=12% Similarity=0.144 Sum_probs=88.0
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|++|++. +.++|.|++.+.+++.++++++..++|..+++.+++...|+. .+.+.+++++.++++|++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~ 186 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFV 186 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEE
Confidence 45789999999999876 999999999999999999999999999999999987766655 688889999999999999
Q ss_pred EEcCcccccCCCCCeeeeCccC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~ 250 (276)
|+|++........+|+.+.-..
T Consensus 187 vgDs~~Di~aA~~aGi~~i~v~ 208 (248)
T PLN02770 187 FEDSVSGIKAGVAAGMPVVGLT 208 (248)
T ss_pred EcCCHHHHHHHHHCCCEEEEEe
Confidence 9999998888888888876554
No 13
>PRK11587 putative phosphatase; Provisional
Probab=99.12 E-value=3.3e-11 Score=106.03 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=81.9
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|.+. +.++|.|++...++...++.... ..|..+++.+++...|+. .|.+.++.+|.++++||+
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ 160 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV 160 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEE
Confidence 45799999999999876 99999999999888888877665 456777777776555554 678889999999999999
Q ss_pred EEcCcccccCCCCCeeeeCccCC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFSA 251 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~~ 251 (276)
|+|++........+|+.+.-+..
T Consensus 161 igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 161 VEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred EecchhhhHHHHHCCCEEEEECC
Confidence 99999998888888988766653
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.11 E-value=5.1e-11 Score=104.23 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=84.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|++. +.++|.|++.+.+++.+++.++..++|..++..+++...|+. .+.+-++.++.+++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 160 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALM 160 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEE
Confidence 45789999999999976 999999999999999999999999999999998887655543 577888889999999999
Q ss_pred EEcCcccccCCCCCeeeeCc
Q 023829 229 VDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~ 248 (276)
|+|++.-+.....+|+.+..
T Consensus 161 iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 161 VGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred ECCCHHHHHHHHHCCCeEEE
Confidence 99999988888788887553
No 15
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.11 E-value=9.8e-11 Score=100.90 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=81.7
Q ss_pred EEeeCccHHHHHHHhhhc-ceEEEEccC-chhhHHHHHHHhcCC---------CceeEEEECCCccccCCc-cccccccc
Q 023829 151 TVFERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRIDGE---------NLFSLRLYRPSTTSTEYR-EHVKDLSC 218 (276)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~-~~~yA~~vl~~Ldp~---------~~f~~rl~r~~c~~~k~~-~~~KdL~~ 218 (276)
.+..+||+.++|+.|.+. +.+.|.|++ ...+++.+++.++.. .+|..+++.+.....++. ...+.+..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 367899999999999976 999999998 999999999999877 889888887653322211 22333333
Q ss_pred c---CcCCCcEEEEEcCcccccCCCCCeeeeCccCCCC
Q 023829 219 L---SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQ 253 (276)
Q Consensus 219 L---~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~ 253 (276)
. |.++++|++|||++..+.....+|+.+--...|.
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 2 5889999999999999998899999988776444
No 16
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.06 E-value=6.8e-11 Score=105.09 Aligned_cols=94 Identities=16% Similarity=0.045 Sum_probs=83.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|++. +.++|.|++.+.+++..++.++...+|..+++.++....|+. .|.+-++++|.++++|++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 171 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF 171 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 45789999999999987 999999999999999999998888899999888877666654 578888999999999999
Q ss_pred EEcCcccccCCCCCeee
Q 023829 229 VDNNPFSFLLQPLNGIP 245 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~ 245 (276)
|+|++..+.....+|+.
T Consensus 172 igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 172 IDDSEPILDAAAQFGIR 188 (224)
T ss_pred EcCCHHHHHHHHHcCCe
Confidence 99999988888888885
No 17
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.06 E-value=5.4e-11 Score=113.79 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=88.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
....||+.+||+.|.+. +.++|.|++.+.+++.+++.++..++|..++..+++...|+. .|.+.++.+|.++++||+
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIV 294 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 34789999999999987 999999999999999999999999999999999988766654 688899999999999999
Q ss_pred EEcCcccccCCCCCeeeeCccC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~ 250 (276)
|+|++..+.....+|+.+....
T Consensus 295 IGDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 295 FGNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred EcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999888888888777664
No 18
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.05 E-value=4.1e-11 Score=102.25 Aligned_cols=96 Identities=9% Similarity=0.113 Sum_probs=82.6
Q ss_pred eeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829 153 FERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD 230 (276)
..-||+ +.|+.+.+.+.++|.|++...+++.+++.++..++|..+++.+++...|+. .+.+.+++++.++++||+|+
T Consensus 88 ~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ig 166 (188)
T PRK10725 88 EPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFE 166 (188)
T ss_pred CCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEe
Confidence 355764 899999877999999999999999999999999999999999887666655 57888888999999999999
Q ss_pred cCcccccCCCCCeeeeCcc
Q 023829 231 NNPFSFLLQPLNGIPCIPF 249 (276)
Q Consensus 231 Dsp~~~~~~p~NgI~V~~f 249 (276)
|++..+.....+|+.+...
T Consensus 167 Ds~~di~aA~~aG~~~i~~ 185 (188)
T PRK10725 167 DADFGIQAARAAGMDAVDV 185 (188)
T ss_pred ccHhhHHHHHHCCCEEEee
Confidence 9999998888888876543
No 19
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.03 E-value=1.8e-10 Score=102.37 Aligned_cols=97 Identities=12% Similarity=0.090 Sum_probs=83.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|++. +.++|.|++...+++.+++.++..++|..++..+++...|+. .+.+.++++|.++++|++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~ 173 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVY 173 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 56899999999999987 899999999999999999999888889888888876655554 578888899999999999
Q ss_pred EEcCcccccCCCCCeeeeCc
Q 023829 229 VDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~ 248 (276)
|+|++........+|+.+..
T Consensus 174 IGDs~~Di~aA~~aG~~~i~ 193 (229)
T PRK13226 174 VGDDERDILAARAAGMPSVA 193 (229)
T ss_pred eCCCHHHHHHHHHCCCcEEE
Confidence 99999888777778887653
No 20
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.02 E-value=1.3e-10 Score=104.47 Aligned_cols=102 Identities=10% Similarity=-0.015 Sum_probs=87.0
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCccccCCc--cccccccccCc-CCCcE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRT 226 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~k~~--~~~KdL~~L~r-d~~~~ 226 (276)
+...||+.++|++|++. +.++|.|++...+++.+++.++..++| ..+++.++....|+. .+.+.++++|. ++++|
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 45789999999999987 999999999999999999999988886 788888876655554 67888899997 49999
Q ss_pred EEEEcCcccccCCCCCeeeeCccCCCC
Q 023829 227 LIVDNNPFSFLLQPLNGIPCIPFSAGQ 253 (276)
Q Consensus 227 IiVDDsp~~~~~~p~NgI~V~~f~~g~ 253 (276)
|+|.|++.-+.....+|+.+.....|.
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v~~g~ 204 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGLILSS 204 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEEecCC
Confidence 999999999888888898877665443
No 21
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.01 E-value=2.1e-10 Score=99.64 Aligned_cols=99 Identities=18% Similarity=0.164 Sum_probs=85.3
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+..+||+.++|+.|++. +.++|.|++...+++.++++++..++|..++..++....|+. .+.+.++++|.+++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~ 163 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVY 163 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEE
Confidence 46899999999999877 999999999999999999999988899988888766544543 578888999999999999
Q ss_pred EEcCcccccCCCCCeeeeCccC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~ 250 (276)
|+|++..+.....+|+.+-...
T Consensus 164 igDs~~d~~aa~~aG~~~i~v~ 185 (213)
T TIGR01449 164 VGDSRVDIQAARAAGCPSVLLT 185 (213)
T ss_pred eCCCHHHHHHHHHCCCeEEEEc
Confidence 9999998887777888776553
No 22
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.00 E-value=1.2e-10 Score=101.22 Aligned_cols=97 Identities=16% Similarity=0.113 Sum_probs=84.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|++|.+. +.++|.|++...+++.+++.++..++|..+++.+++...|+. .+.+.++.++.+++++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 55789999999999976 999999999999999999999999999999888876554543 567778889999999999
Q ss_pred EEcCcccccCCCCCeeeeCc
Q 023829 229 VDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~ 248 (276)
|+|++..+.....+|+.+..
T Consensus 154 igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 154 VGDAVTDLASARAAGTATVA 173 (205)
T ss_pred EcCCHHHHHHHHHcCCeEEE
Confidence 99999888888888887654
No 23
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.99 E-value=1.1e-10 Score=99.81 Aligned_cols=93 Identities=22% Similarity=0.246 Sum_probs=79.0
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccc----cCCc--cccccccccCcCCCc
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS----TEYR--EHVKDLSCLSKDLCR 225 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~----~k~~--~~~KdL~~L~rd~~~ 225 (276)
+...||+.++|+.|+ +.++|.|++....+..+++.++..++|..++..++... .|+. .|.+-++++|.++++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 346799999999998 68999999999999999999988889999988876554 2443 678888899999999
Q ss_pred EEEEEcCcccccCCCCCeeee
Q 023829 226 TLIVDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 226 ~IiVDDsp~~~~~~p~NgI~V 246 (276)
+++|+|++........+|+.+
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEE
Confidence 999999998877777777764
No 24
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.99 E-value=1.9e-10 Score=100.61 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=84.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|++|.+. +.++|.|++...+++..++.++...+|..+++.++....|+. .|.+.++++|.+++++|+
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 172 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVM 172 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEE
Confidence 56899999999999987 999999999999999999999999999999998887766654 678889999999999999
Q ss_pred EEcCc-ccccCCCCCeeeeCcc
Q 023829 229 VDNNP-FSFLLQPLNGIPCIPF 249 (276)
Q Consensus 229 VDDsp-~~~~~~p~NgI~V~~f 249 (276)
|+|++ ..+.....+|+.+.-.
T Consensus 173 igDs~~~di~~A~~aG~~~i~~ 194 (221)
T TIGR02253 173 VGDRLDKDIKGAKNLGMKTVWI 194 (221)
T ss_pred ECCChHHHHHHHHHCCCEEEEE
Confidence 99998 5666666677765444
No 25
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.97 E-value=1.3e-10 Score=98.62 Aligned_cols=93 Identities=12% Similarity=0.123 Sum_probs=79.3
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|.+. +.++|.|++ .+++.+++.++..++|..++..+.+...|+. .+.+-++.++.+++++|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56899999999999987 999999988 7799999998888899999888776655544 567788888999999999
Q ss_pred EEcCcccccCCCCCeeee
Q 023829 229 VDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V 246 (276)
|+|+...+.....+|+.+
T Consensus 165 IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 165 FEDALAGVQAARAAGMFA 182 (185)
T ss_pred EeCcHhhHHHHHHCCCeE
Confidence 999998888777788764
No 26
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.97 E-value=1.3e-10 Score=97.92 Aligned_cols=94 Identities=19% Similarity=0.233 Sum_probs=78.8
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|++. +.++|.|++.... ..+..+++..++|..+++.+++...|+. .|.+-++.+|.+++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 46789999999999976 9999999999999 7777768888899999988777666654 577778889999999999
Q ss_pred EEcCcccccCCCCCeeee
Q 023829 229 VDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V 246 (276)
|||++.........|+..
T Consensus 163 vgD~~~di~aA~~~G~~~ 180 (183)
T TIGR01509 163 VDDSPAGIEAAKAAGMHT 180 (183)
T ss_pred EcCCHHHHHHHHHcCCEE
Confidence 999998877666777653
No 27
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.97 E-value=4.1e-10 Score=103.36 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=79.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD 230 (276)
+...||+.++|++|.+. +.++|.|++...+++.+++.++..++|..+++.+... .+...+.+-+++++.++++|++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEEC
Confidence 34679999999999977 9999999999999999999999999999887765542 233356666777888999999999
Q ss_pred cCcccccCCCCCeeeeCc
Q 023829 231 NNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 231 Dsp~~~~~~p~NgI~V~~ 248 (276)
|++........+|+.+.-
T Consensus 220 Ds~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 220 DETRDVEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHCCCeEEE
Confidence 999888777778887654
No 28
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.94 E-value=8.5e-11 Score=97.14 Aligned_cols=96 Identities=19% Similarity=0.248 Sum_probs=82.9
Q ss_pred EEeeCccHHHHHHHhh-hcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829 151 TVFERPGLREFLKQLS-EFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (276)
Q Consensus 151 ~v~~RPgl~eFL~~l~-~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I 227 (276)
.....||+.++|+.|+ +.+.++|.|++....++.+++.+....+|..+++.+++...|+. .|.+-++.+|.++++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 4779999999999999 45999999999999999999999888899999998887766664 57788888999999999
Q ss_pred EEEcCcccccCCCCCeeee
Q 023829 228 IVDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 228 iVDDsp~~~~~~p~NgI~V 246 (276)
+|||++.........|+..
T Consensus 155 ~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp EEESSHHHHHHHHHTTSEE
T ss_pred EEeCCHHHHHHHHHcCCeE
Confidence 9999998776666666643
No 29
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.94 E-value=6.9e-10 Score=90.56 Aligned_cols=82 Identities=17% Similarity=0.019 Sum_probs=67.4
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccC-chhhHHHHHHHhc-------CCCceeEEEECCCccccCCccccccccccC--c
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAG-LEGYARPLVDRID-------GENLFSLRLYRPSTTSTEYREHVKDLSCLS--K 221 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~-~~~yA~~vl~~Ld-------p~~~f~~rl~r~~c~~~k~~~~~KdL~~L~--r 221 (276)
...||+.++|+.|++. +.++|.|++ .+.++..+++... ..++|..+...+.. .+...+.+-++++| .
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~--pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWL--PKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCC--cHHHHHHHHHHHhcCCC
Confidence 3789999999999976 999999999 8999999999877 55677776655442 23346788888899 9
Q ss_pred CCCcEEEEEcCcccc
Q 023829 222 DLCRTLIVDNNPFSF 236 (276)
Q Consensus 222 d~~~~IiVDDsp~~~ 236 (276)
++++|++|||++...
T Consensus 107 ~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 107 KPKSILFVDDRPDNN 121 (128)
T ss_pred CcceEEEECCCHhHH
Confidence 999999999998763
No 30
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.93 E-value=4.7e-10 Score=98.24 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=81.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEECCCccccCCc--cccccccccCcC-CCc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCR 225 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd-~~~ 225 (276)
..+.||+.++|++|++. +.++|.|++...+++.+++.++.. .+|..+++.++....|+. .+.+-+++++.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 45899999999999876 999999999999999999999887 889988888775444443 577888889886 799
Q ss_pred EEEEEcCcccccCCCCCeeee
Q 023829 226 TLIVDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 226 ~IiVDDsp~~~~~~p~NgI~V 246 (276)
|++|+|++.........|+.+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998888777888876
No 31
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.92 E-value=4.4e-10 Score=98.93 Aligned_cols=99 Identities=12% Similarity=0.037 Sum_probs=86.8
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
....||+.++|+.|++. +.++|.|++....++.+++.++..++|..++..+.....|+. .+.+-++.+|.++++|++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 170 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCVA 170 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 45789999999999977 999999999999999999999999999999988876555544 678888899999999999
Q ss_pred EEcCcccccCCCCCeeeeCccC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~ 250 (276)
|+|++........+|+.+.-+.
T Consensus 171 igDs~~Di~aA~~aG~~~i~v~ 192 (222)
T PRK10826 171 LEDSFNGMIAAKAARMRSIVVP 192 (222)
T ss_pred EcCChhhHHHHHHcCCEEEEec
Confidence 9999998888888888876664
No 32
>PRK09449 dUMP phosphatase; Provisional
Probab=98.90 E-value=5.4e-10 Score=98.16 Aligned_cols=95 Identities=20% Similarity=0.217 Sum_probs=80.6
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCc-CCCcEEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSK-DLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~r-d~~~~Ii 228 (276)
+...||+.++|+.|++.+.++|.|++....++..++.++..++|..+++.+++...|+. .|.+-++.+|. +.++|++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 45789999999999977999999999999999999999888999999998888766665 67888899986 4589999
Q ss_pred EEcCcc-cccCCCCCeeee
Q 023829 229 VDNNPF-SFLLQPLNGIPC 246 (276)
Q Consensus 229 VDDsp~-~~~~~p~NgI~V 246 (276)
|+|++. .......+|+.+
T Consensus 174 vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDT 192 (224)
T ss_pred EcCCcHHHHHHHHHCCCcE
Confidence 999984 666666667654
No 33
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.89 E-value=6.3e-10 Score=97.63 Aligned_cols=96 Identities=8% Similarity=0.084 Sum_probs=81.2
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCcee-EEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFS-LRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~-~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
....||+.++|+.|. +.++|.|++.+.+++.++++.+...+|. .+++.++....|+. .|.+-++++|.++++||+
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 457899999999994 8999999999999999999999888995 56677666655554 678888999999999999
Q ss_pred EEcCcccccCCCCCeeeeCcc
Q 023829 229 VDNNPFSFLLQPLNGIPCIPF 249 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f 249 (276)
|+|++.........|+.+.-+
T Consensus 165 igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EeCcHhhHHHHHHCCCEEEEE
Confidence 999999888878888877544
No 34
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.88 E-value=4.6e-10 Score=97.93 Aligned_cols=98 Identities=11% Similarity=0.020 Sum_probs=83.7
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--ccccccccc-CcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL-SKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L-~rd~~~~Ii 228 (276)
+..+||+.++|+++++.+.++|-|++....++.+++.++..++|..+++.+++...|++ .|.+.++.+ |.+++++|+
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 56899999999999988999999999999999999999998999999998887766655 577888999 999999999
Q ss_pred EEcCc-ccccCCCCCeeeeCcc
Q 023829 229 VDNNP-FSFLLQPLNGIPCIPF 249 (276)
Q Consensus 229 VDDsp-~~~~~~p~NgI~V~~f 249 (276)
|+|++ ..+.....+|+...-+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEE
Confidence 99998 5666666677654433
No 35
>PLN02940 riboflavin kinase
Probab=98.88 E-value=5.1e-10 Score=107.32 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=85.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHH-HhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVD-RIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~-~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I 227 (276)
+...||+.++|++|.+. +.++|.|++.+.+++.+++ ..+..++|..+++.+++...|+. .+.+.++.+|.++++||
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l 171 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCL 171 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEE
Confidence 34789999999999887 9999999999999999887 67777899999999988766654 67888899999999999
Q ss_pred EEEcCcccccCCCCCeeeeCccC
Q 023829 228 IVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 228 iVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
+|+|+.........+|+.+.-..
T Consensus 172 ~VGDs~~Di~aA~~aGi~~I~v~ 194 (382)
T PLN02940 172 VIEDSLPGVMAGKAAGMEVIAVP 194 (382)
T ss_pred EEeCCHHHHHHHHHcCCEEEEEC
Confidence 99999998887878888765543
No 36
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.87 E-value=1.2e-09 Score=99.24 Aligned_cols=101 Identities=11% Similarity=-0.024 Sum_probs=84.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-eEEEECCCccccCCc--cccccccccCcC-CCcE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-SLRLYRPSTTSTEYR--EHVKDLSCLSKD-LCRT 226 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~~rl~r~~c~~~k~~--~~~KdL~~L~rd-~~~~ 226 (276)
+...||+.++|+.|++. +.++|.|++.+..++.+++.+...++| ..+++.+++...|+. .+.+.++++|.+ +++|
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 45789999999999977 999999999999999999998877775 777888876655554 678888999975 6999
Q ss_pred EEEEcCcccccCCCCCeeeeCccCCC
Q 023829 227 LIVDNNPFSFLLQPLNGIPCIPFSAG 252 (276)
Q Consensus 227 IiVDDsp~~~~~~p~NgI~V~~f~~g 252 (276)
|+|+|++..+.....+|+.+.....|
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 99999999888888888876655433
No 37
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.87 E-value=1.7e-09 Score=99.02 Aligned_cols=95 Identities=19% Similarity=0.285 Sum_probs=80.3
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
...+||+.++|+.|++. +.++|.|++...+++.+++.++..++|..+++.+.+...|+. .+.+-++++|.++++||+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 34789999999999876 999999999999999999998888889888887766554443 466777888999999999
Q ss_pred EEcCcccccCCCCCeeee
Q 023829 229 VDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V 246 (276)
|+|+.........+|+.+
T Consensus 180 IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred ECCCHHHHHHHHHCCCeE
Confidence 999998887777788754
No 38
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.85 E-value=1.8e-09 Score=99.59 Aligned_cols=100 Identities=13% Similarity=0.183 Sum_probs=79.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc---eeEEEECCCccccCCc--cccccccccCcCCCc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL---FSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCR 225 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~---f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~ 225 (276)
+...||+.++|+.|++. +.++|.|++...++..+++.+...++ |..+ ..+++...|+. .+.+-++.+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 46899999999999986 99999999999999999987743333 3333 66666555554 678888999999999
Q ss_pred EEEEEcCcccccCCCCCeeeeCccCCC
Q 023829 226 TLIVDNNPFSFLLQPLNGIPCIPFSAG 252 (276)
Q Consensus 226 ~IiVDDsp~~~~~~p~NgI~V~~f~~g 252 (276)
+|+|+|++..+.....+|+.+.-...|
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 999999999888888888876655433
No 39
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=98.84 E-value=5.4e-10 Score=97.38 Aligned_cols=99 Identities=16% Similarity=-0.007 Sum_probs=78.8
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhh--HHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY--ARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRT 226 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~y--A~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~ 226 (276)
+...||+.++|+.|++. +.++|.|++.... +...+..++...+|..++..+++...|+. .|.+.++++|.++++|
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 55789999999999976 9999999987655 33333334455678888877766555554 6778889999999999
Q ss_pred EEEEcCcccccCCCCCeeeeCccC
Q 023829 227 LIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 227 IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
++|||++.........|+...-+.
T Consensus 173 l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 173 VFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred EEEcCCHHHHHHHHHcCCEEEEEC
Confidence 999999999888888899887775
No 40
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.84 E-value=1.1e-08 Score=82.95 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=69.8
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCc--------hhhHHHHHHHhcCCCceeEEEECCCccccCCcccccccccc-Cc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGL--------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL-SK 221 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~--------~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L-~r 221 (276)
....||+.++|++|.+. +.++|.|++. ..+++.+++.++.. +...++...+...+...+.+-++.+ +.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 101 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACPHCRKPKPGMFLEALKRFNEI 101 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECCCCCCCChHHHHHHHHHcCCC
Confidence 34789999999999877 9999999999 88899999988765 3333333322222223567788888 59
Q ss_pred CCCcEEEEEc-CcccccCCCCCeeee
Q 023829 222 DLCRTLIVDN-NPFSFLLQPLNGIPC 246 (276)
Q Consensus 222 d~~~~IiVDD-sp~~~~~~p~NgI~V 246 (276)
+++++++|+| +...+.....+|+..
T Consensus 102 ~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 102 DPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred ChhheEEEcCCCcccHHHHHHCCCeE
Confidence 9999999999 677777777777754
No 41
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.83 E-value=7.9e-10 Score=93.80 Aligned_cols=93 Identities=11% Similarity=0.128 Sum_probs=77.2
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
...||+.++|+.|++. +.++|.|++. .+..++++++...+|..++..++....|+. .|.+.+++++.+++++|+|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 5789999999999977 9999999864 467889998888899998887765544444 5788888999999999999
Q ss_pred EcCcccccCCCCCeeeeC
Q 023829 230 DNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 230 DDsp~~~~~~p~NgI~V~ 247 (276)
+|++..+.....+|+.+.
T Consensus 165 gD~~~di~aA~~aG~~~i 182 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMFAV 182 (185)
T ss_pred ecCHHHHHHHHHcCCEEE
Confidence 999988887778888653
No 42
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.83 E-value=1.4e-09 Score=94.09 Aligned_cols=92 Identities=13% Similarity=0.023 Sum_probs=75.7
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
...||+.++|+.|++. +.++|.|++... ++.+++.++..++|..++..+++...|+. .+.+.++.+|.+++++|+|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 5689999999999987 999999998875 47888888888899999888877666654 5778888999999999999
Q ss_pred EcCc-ccccCCCCCeee
Q 023829 230 DNNP-FSFLLQPLNGIP 245 (276)
Q Consensus 230 DDsp-~~~~~~p~NgI~ 245 (276)
+|++ .-+......|+.
T Consensus 184 gD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 184 GDSLRNDYQGARAAGWR 200 (203)
T ss_pred CCCchHHHHHHHHcCCe
Confidence 9997 456555566664
No 43
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.79 E-value=6.8e-09 Score=86.30 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=66.9
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEEC-----CCccccCCc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR 210 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~---------------~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~ 210 (276)
....||+.++|+.|++. |.++|.|++.. ..+..+++.++.. +...++. +.....|+.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~~~~~KP~ 103 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVA--VDGVLFCPHHPADNCSCRKPK 103 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence 35789999999999977 99999999874 4566666666553 2222222 222222333
Q ss_pred --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829 211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~ 247 (276)
.+.+-++.++.++++|++|+|+..-......+|+..-
T Consensus 104 ~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 104 PGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 5677778889999999999999888777777777543
No 44
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.77 E-value=4.6e-09 Score=90.90 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=70.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVD 230 (276)
..|+..++|+.|++. +.++|.|++.+.+++.+++.++...+|..+++.++... |+. .+.+.++.+|.++++||+|+
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEEe
Confidence 445669999999977 99999999999999999999999999999988887654 544 57788888999999999999
Q ss_pred cCcccc
Q 023829 231 NNPFSF 236 (276)
Q Consensus 231 Dsp~~~ 236 (276)
|++...
T Consensus 186 D~~~Di 191 (197)
T TIGR01548 186 DTVDDI 191 (197)
T ss_pred CCHHHH
Confidence 998654
No 45
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.76 E-value=8.1e-09 Score=90.29 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=79.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
...+||+.+||+.+++. +.++|.|++...+++.+++.++..++|...+..+.+...|+. .+.+-++.++.+++++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 55899999999999976 999999999999999999999888888887777665444433 467778888999999999
Q ss_pred EEcCcccccCCCCCeeeeC
Q 023829 229 VDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~ 247 (276)
|+|++..+......|+.+-
T Consensus 172 igD~~~Di~~a~~~g~~~i 190 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSV 190 (226)
T ss_pred ECCCHHHHHHHHHCCCcEE
Confidence 9999988777666766433
No 46
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.76 E-value=2.5e-09 Score=92.82 Aligned_cols=99 Identities=11% Similarity=0.030 Sum_probs=83.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-cCCCceeEEEECCCccccCCc--cccccccccCcCCCcEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L-dp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~I 227 (276)
...+||+.++|+.+++. +.++|.|++....+..++... ....+|..+++.+++...|+. .|.+.++.+|.++++|+
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 45799999999999876 999999999988776655442 345679999998888877765 67888899999999999
Q ss_pred EEEcCcccccCCCCCeeeeCccC
Q 023829 228 IVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 228 iVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
+|||++..+......|+.+.-+.
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVT 185 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEec
Confidence 99999999888888999987775
No 47
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.76 E-value=4.3e-09 Score=102.98 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=78.6
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccc-cCCccccccccccCcCCCcEEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTS-TEYREHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~-~k~~~~~KdL~~L~rd~~~~IiV 229 (276)
+...||+.++|++|++. +.++|.|++..++++.+++.++..++|..+++.++... .++..+.+.++.++ +++||+|
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~--~~~~v~V 406 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYD--IKEAAVV 406 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcC--cceEEEE
Confidence 45789999999999876 99999999999999999999999999999998887532 33445666666664 5889999
Q ss_pred EcCcccccCCCCCeeeeCc
Q 023829 230 DNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 230 DDsp~~~~~~p~NgI~V~~ 248 (276)
.|++.-+.....+|+.+.-
T Consensus 407 GDs~~Di~aAk~AG~~~I~ 425 (459)
T PRK06698 407 GDRLSDINAAKDNGLIAIG 425 (459)
T ss_pred eCCHHHHHHHHHCCCeEEE
Confidence 9999988888888876533
No 48
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.75 E-value=3.4e-09 Score=87.62 Aligned_cols=83 Identities=19% Similarity=0.124 Sum_probs=68.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
....||+.++|+.|.+. +.++|.|++.+..++.+++.+ ...+|..++..+++. .|+. .+.+-++++|.++ +|++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence 33569999999999866 999999999999999999996 556788888877765 5544 5778888889888 9999
Q ss_pred EEcCccccc
Q 023829 229 VDNNPFSFL 237 (276)
Q Consensus 229 VDDsp~~~~ 237 (276)
|.|++....
T Consensus 140 iGDs~~Di~ 148 (154)
T TIGR01549 140 VGDNLNDIE 148 (154)
T ss_pred EeCCHHHHH
Confidence 999976543
No 49
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.74 E-value=2.3e-08 Score=85.48 Aligned_cols=93 Identities=13% Similarity=0.110 Sum_probs=67.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCch----hhHH-----------HHHHHhcCCCceeEEEECC-----------Cc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLE----GYAR-----------PLVDRIDGENLFSLRLYRP-----------ST 204 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~----~yA~-----------~vl~~Ldp~~~f~~rl~r~-----------~c 204 (276)
+.+.||+.++|++|++. |.++|.|++.. .+++ .++..+... |..++++. .|
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 102 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVC 102 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCC
Confidence 44789999999999987 99999999985 2333 333332222 55555532 33
Q ss_pred cccCCc--cccccccccCcCCCcEEEEEcCcccccCCCCCeeee
Q 023829 205 TSTEYR--EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 205 ~~~k~~--~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V 246 (276)
...|+. .+.+-++++|.+++++++|+|++........+|+.+
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcE
Confidence 333443 677888899999999999999999888777888764
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.72 E-value=2.2e-08 Score=87.64 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=74.1
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEE-----------CCCcccc-CCccccccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLY-----------RPSTTST-EYREHVKDLSC 218 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~-----------r~~c~~~-k~~~~~KdL~~ 218 (276)
+..+||+.+||+.|.+. +.++|.|++...+++.+++.++...+|...+. .+.+... |...+.+-++.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~ 163 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRK 163 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHHH
Confidence 45899999999999986 99999999999999999999887777754322 1111111 22245566677
Q ss_pred cCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829 219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
++.++++|++|+|+..........|+.+ .|.
T Consensus 164 ~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~ 194 (219)
T TIGR00338 164 EGISPENTVAVGDGANDLSMIKAAGLGI-AFN 194 (219)
T ss_pred cCCCHHHEEEEECCHHHHHHHHhCCCeE-EeC
Confidence 8889999999999998887766677776 453
No 51
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.71 E-value=1.3e-08 Score=80.11 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=66.3
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc----------------CCc--cc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST----------------EYR--EH 212 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~----------------k~~--~~ 212 (276)
...+|++.++|+.|.+. +.++|.|++...+++.+++.+.....+..++..+..... +.. .+
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKL 102 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHHHH
Confidence 45899999999999998 999999999999999999998766566666654433221 222 33
Q ss_pred cccccccCcCCCcEEEEEcCcccccCCC
Q 023829 213 VKDLSCLSKDLCRTLIVDNNPFSFLLQP 240 (276)
Q Consensus 213 ~KdL~~L~rd~~~~IiVDDsp~~~~~~p 240 (276)
.+-++.++.+.+.+++|+|+........
T Consensus 103 ~~~~~~~~~~~~~~~~igD~~~d~~~~~ 130 (139)
T cd01427 103 LAALKLLGVDPEEVLMVGDSLNDIEMAK 130 (139)
T ss_pred HHHHHHcCCChhhEEEeCCCHHHHHHHH
Confidence 4445556677899999999997654433
No 52
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.71 E-value=2.1e-09 Score=92.81 Aligned_cols=99 Identities=16% Similarity=0.087 Sum_probs=76.3
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCC----ceeEEEECCCccccCCccccccccccCcCCCcEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGEN----LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~----~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~I 227 (276)
+...||+.++|+.|++.+.+++-|++.........+.+...+ +|+.+++.++... +...+.+.++++| ++.+|
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~-kp~~~~~a~~~~~--~~~~v 149 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDES-KEKLFIKAKEKYG--DRVVC 149 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcc-cHHHHHHHHHHhC--CCcEE
Confidence 458999999999999888888878877666655666664433 5677777776543 4456777888888 78899
Q ss_pred EEEcCcccccCCCCC--eeeeCccCCCC
Q 023829 228 IVDNNPFSFLLQPLN--GIPCIPFSAGQ 253 (276)
Q Consensus 228 iVDDsp~~~~~~p~N--gI~V~~f~~g~ 253 (276)
+|||+.........+ ||.+--+..|.
T Consensus 150 ~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 150 FVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred EeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 999999999888888 99888776553
No 53
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.70 E-value=5.1e-08 Score=79.93 Aligned_cols=150 Identities=19% Similarity=0.096 Sum_probs=103.9
Q ss_pred EEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceEEEE
Q 023829 96 TVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADLILF 174 (276)
Q Consensus 96 tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yelvI~ 174 (276)
.+|||+||||++....|++.++.+--. .-.++ ... ..-++++|++.+||+++... |-+..+
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs------~n~i~------Ds~------G~ev~L~~~v~~~l~warnsG~i~~~~ 63 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVS------SNTIE------DSK------GREVHLFPDVKETLKWARNSGYILGLA 63 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecC------cccee------cCC------CeEEEEcHHHHHHHHHHHhCCcEEEEe
Confidence 589999999998887888777654211 00111 112 23488999999999999988 999999
Q ss_pred ccCchhhHHHHHHHhcCCCceeEEEECCCccccCCcccccccccc------CcCCCcEEEEEcCccccc---CCCCCeee
Q 023829 175 TAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCL------SKDLCRTLIVDNNPFSFL---LQPLNGIP 245 (276)
Q Consensus 175 Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L------~rd~~~~IiVDDsp~~~~---~~p~NgI~ 245 (276)
|...+.-|-++++.+|...+|.+.....+= .|.....+-|..+ ...++++|.+||+...+. .+-+|-=.
T Consensus 64 sWN~~~kA~~aLral~~~~yFhy~ViePhP--~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~ 141 (164)
T COG4996 64 SWNFEDKAIKALRALDLLQYFHYIVIEPHP--YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKC 141 (164)
T ss_pred ecCchHHHHHHHHHhchhhhEEEEEecCCC--hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeee
Confidence 999999999999999999999998877762 2323333444433 347899999999998763 23445444
Q ss_pred eCccCCCCCCChHHhHHHHHHHHh
Q 023829 246 CIPFSAGQPHDNQVLTNVTLLKFL 269 (276)
Q Consensus 246 V~~f~~g~~~D~eL~~l~~~L~~L 269 (276)
++.|. +- ..-..+.++|...
T Consensus 142 ~~~~~-Di---~c~~ei~slLs~~ 161 (164)
T COG4996 142 LEMWK-DI---SCYSEIFSLLSHV 161 (164)
T ss_pred eEeec-ch---HHHHHHHHHHHhh
Confidence 45553 11 2334456665543
No 54
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.70 E-value=2.5e-07 Score=85.69 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=92.0
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeC-ccHHHHHHHhhhc-ce
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF-AD 170 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~R-Pgl~eFL~~l~~~-ye 170 (276)
.++.+||||||||+...+ -+..| ||+.++|++|++. +.
T Consensus 127 ~~~~i~~D~D~TL~~~~~----------------------------------------~v~irdp~V~EtL~eLkekGik 166 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE----------------------------------------PVRIRDPFVYDSLDELKERGCV 166 (303)
T ss_pred eccEEEEecCCCccCCCC----------------------------------------ccccCChhHHHHHHHHHHCCCE
Confidence 568999999999997421 14478 9999999999987 99
Q ss_pred EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCC---------------cccccccc---cc-------------
Q 023829 171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEY---------------REHVKDLS---CL------------- 219 (276)
Q Consensus 171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~---------------~~~~KdL~---~L------------- 219 (276)
++|+|++.+++++.+++.++..++|..++..++...... ..++.|.. .|
T Consensus 167 LaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~ 246 (303)
T PHA03398 167 LVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRK 246 (303)
T ss_pred EEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHH
Confidence 999999999999999999999999988888776544321 02234443 22
Q ss_pred -CcC-CCcEEEEEcCcccccCCCCCeeeeCccCCCCCCChH
Q 023829 220 -SKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258 (276)
Q Consensus 220 -~rd-~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~e 258 (276)
|.+ .+.+-+|||-+.+ ..+-+|-+.|.... ...+|-+
T Consensus 247 ~gvn~~KtiTLVDDl~~N-n~~YD~fv~v~rcp-~P~~DW~ 285 (303)
T PHA03398 247 KGVNYFKTITLVDDLKSN-NYSYDYFVNVKRCP-EPVNDWD 285 (303)
T ss_pred cCcceeccEEEeccCccc-CccceeEEEeeeCC-CCcHHHH
Confidence 323 3557899999876 35668889888885 3444433
No 55
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.67 E-value=5.3e-08 Score=82.73 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=78.6
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccC---------------chhhHHHHHHHhcCCCceeEEEEC-----CCccccCCc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR 210 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~---------------~~~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~ 210 (276)
+..-||+.++|++|.+. |.++|.|+. ...+++.+++.++.. |..++++ +++...|+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~ 105 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPK 105 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCC
Confidence 56889999999999987 999999996 356788888888886 7666654 555555553
Q ss_pred --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCccCC
Q 023829 211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFSA 251 (276)
Q Consensus 211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~~ 251 (276)
.+..-++.++.+++++++|.|+..-......+|+.+--+..
T Consensus 106 ~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 106 IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence 45566677888999999999998888888889999888863
No 56
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.62 E-value=1e-07 Score=81.67 Aligned_cols=95 Identities=14% Similarity=0.093 Sum_probs=68.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCch---------------hhHHHHHHHhcCCCceeEEEECCC-----ccccCCc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLE---------------GYARPLVDRIDGENLFSLRLYRPS-----TTSTEYR 210 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~---------------~yA~~vl~~Ldp~~~f~~rl~r~~-----c~~~k~~ 210 (276)
+...||+.++|++|++. |.++|.|++.. ++...+++.++. .|..+++... +...|+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~ 105 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPK 105 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCC
Confidence 45789999999999987 99999999873 223334443332 3666666432 3333443
Q ss_pred --cccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCc
Q 023829 211 --EHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 211 --~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~ 248 (276)
.+.+.++.+|.+++++++|+|++........+|+.+--
T Consensus 106 p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~ 145 (181)
T PRK08942 106 PGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVL 145 (181)
T ss_pred HHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEE
Confidence 57788888999999999999999887777777765443
No 57
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.61 E-value=2.1e-08 Score=88.70 Aligned_cols=99 Identities=18% Similarity=0.174 Sum_probs=84.3
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
...-||+.+.|..+++. |.++|.|+.....++.+++.++...+|..+...+.+...|+. ....-++.+|.+++++|+
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~ 167 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALM 167 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEE
Confidence 35789999999999988 999999999999999999999999999999886666665554 466777888988789999
Q ss_pred EEcCcccccCCCCCeeeeCccC
Q 023829 229 VDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~f~ 250 (276)
|=|+..-......+|+.+.-..
T Consensus 168 VGDs~~Di~aA~~Ag~~~v~v~ 189 (220)
T COG0546 168 VGDSLNDILAAKAAGVPAVGVT 189 (220)
T ss_pred ECCCHHHHHHHHHcCCCEEEEE
Confidence 9999999888888887655443
No 58
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.59 E-value=1.6e-07 Score=86.95 Aligned_cols=124 Identities=17% Similarity=0.135 Sum_probs=92.3
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeC-ccHHHHHHHhhhc-ce
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFER-PGLREFLKQLSEF-AD 170 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~R-Pgl~eFL~~l~~~-ye 170 (276)
.++.+||||||||+...+ -+..| ||+.+.|++|.+. +.
T Consensus 125 ~~kvIvFDLDgTLi~~~~----------------------------------------~v~irdPgV~EaL~~LkekGik 164 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEE----------------------------------------PVRIRDPRIYDSLTELKKRGCI 164 (301)
T ss_pred cceEEEEecCCCCcCCCC----------------------------------------ccccCCHHHHHHHHHHHHCCCE
Confidence 467999999999997411 14478 9999999999998 99
Q ss_pred EEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc---------------ccccccc-----------------c
Q 023829 171 LILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLS-----------------C 218 (276)
Q Consensus 171 lvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~---------------~~~KdL~-----------------~ 218 (276)
++|||++.+++++.+++.++..++|..+++.++....++. .++.|.. +
T Consensus 165 LaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~ 244 (301)
T TIGR01684 165 LVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYD 244 (301)
T ss_pred EEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHH
Confidence 9999999999999999999999999888887776544322 1233332 2
Q ss_pred cCcC-CCcEEEEEcCcccccCCCCCeeeeCccCCCCCCChH
Q 023829 219 LSKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDNQ 258 (276)
Q Consensus 219 L~rd-~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~e 258 (276)
.|.+ .+.+-+|||-+.+ ..+-+|-+.|.... ...+|-+
T Consensus 245 ~gvn~~KtitLVDDl~~N-n~~YD~fv~v~rcp-~P~~DW~ 283 (301)
T TIGR01684 245 LGVNYFKSITLVDDLADN-NFNYDYFVNVSRCP-VPVNDWD 283 (301)
T ss_pred cCCceeeeEEEeccCccc-CccceeEEEeeeCC-CCchHHH
Confidence 2333 3557899998876 35668888888885 3444543
No 59
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.58 E-value=2.7e-08 Score=106.36 Aligned_cols=99 Identities=9% Similarity=0.091 Sum_probs=87.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC-CceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE-NLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~-~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
..||+.++|++|++. +.++|.|++...+++.+++.++.. .+|..+++.+++...|+. .|.+.+++++.++++||+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 589999999999987 999999999999999999999875 689999999888766654 6788899999999999999
Q ss_pred EcCcccccCCCCCeeeeCccCCC
Q 023829 230 DNNPFSFLLQPLNGIPCIPFSAG 252 (276)
Q Consensus 230 DDsp~~~~~~p~NgI~V~~f~~g 252 (276)
+|++..+.....+|+.+.-...+
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVTTT 264 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEECCC
Confidence 99999988888889888776543
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.53 E-value=1.8e-07 Score=80.15 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=71.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc------------cccccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR------------EHVKDLSC 218 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~------------~~~KdL~~ 218 (276)
+..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|...+..++....+.. .+.+-++.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~~ 158 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKRE 158 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHHH
Confidence 45899999999999977 999999999999999999999877777665543322211111 12222445
Q ss_pred cCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829 219 LSKDLCRTLIVDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 219 L~rd~~~~IiVDDsp~~~~~~p~NgI~V~ 247 (276)
++.+++++++|.|+..-.......|+.+.
T Consensus 159 ~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 159 LNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred hCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 67889999999999987766666777653
No 61
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=98.50 E-value=4.5e-07 Score=77.32 Aligned_cols=91 Identities=10% Similarity=0.052 Sum_probs=63.8
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchh------------hHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEG------------YARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSC 218 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~------------yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~ 218 (276)
.-||+.+.|+.|.+. |.++|.|++... +++.+++.++... ...++.+.....|+. .+..-++.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~~ 120 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQSQ 120 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHHH
Confidence 459999999999876 999999998763 5677788777642 334444443233332 45566677
Q ss_pred cC--cCCCcEEEEEcCc--------ccccCCCCCeeee
Q 023829 219 LS--KDLCRTLIVDNNP--------FSFLLQPLNGIPC 246 (276)
Q Consensus 219 L~--rd~~~~IiVDDsp--------~~~~~~p~NgI~V 246 (276)
+| .+++++++|.|++ .-......+|+..
T Consensus 121 ~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 121 YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 77 8899999999997 2445555667654
No 62
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.50 E-value=1.8e-07 Score=87.58 Aligned_cols=82 Identities=22% Similarity=0.113 Sum_probs=66.4
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH----hcCCCceeEEEECCCccccCCccccccccccCcCCCcEEE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR----IDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~----Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~Ii 228 (276)
..||+.++|+.|++. +.+.|.|+..+..|..+++. +....+|..+... ...+.....+-++.+|.+++.+|+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vf 108 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFLF 108 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEE
Confidence 478999999999987 99999999999999999998 7777778765333 112333567777889999999999
Q ss_pred EEcCcccccC
Q 023829 229 VDNNPFSFLL 238 (276)
Q Consensus 229 VDDsp~~~~~ 238 (276)
|||++.....
T Consensus 109 idD~~~d~~~ 118 (320)
T TIGR01686 109 IDDNPAERAN 118 (320)
T ss_pred ECCCHHHHHH
Confidence 9999987643
No 63
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=98.50 E-value=1.3e-07 Score=86.92 Aligned_cols=131 Identities=16% Similarity=0.142 Sum_probs=97.7
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
+++.+++|+||||....+... .++.. .......||+.++|+.|.+. +.+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~-------------~~~~~-----------------~~~~~~~~~~~~~l~~l~~~g~~i 206 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP-------------YDWTK-----------------VKEDKPNPMVVELVKMYKAAGYEI 206 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc-------------cchhh-----------------cccCCCChhHHHHHHHHHhCCCEE
Confidence 468899999999997532110 00000 00123799999999999987 999
Q ss_pred EEEccCchhhHHHHHHHhcCCC-ceeEEEECC-------CccccCCc--cccccccccCc-CCCcEEEEEcCcccccCCC
Q 023829 172 ILFTAGLEGYARPLVDRIDGEN-LFSLRLYRP-------STTSTEYR--EHVKDLSCLSK-DLCRTLIVDNNPFSFLLQP 240 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~r~-------~c~~~k~~--~~~KdL~~L~r-d~~~~IiVDDsp~~~~~~p 240 (276)
+|.|+.....++.+++.|+..+ +|..+...+ .+...++. ...+.|..++. +.+.+++|||++.......
T Consensus 207 ~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~ 286 (300)
T PHA02530 207 IVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWR 286 (300)
T ss_pred EEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHH
Confidence 9999999999999999999997 887776666 22233333 45666777777 6799999999999999999
Q ss_pred CCeeeeCccCCCC
Q 023829 241 LNGIPCIPFSAGQ 253 (276)
Q Consensus 241 ~NgI~V~~f~~g~ 253 (276)
.+||.+-....|+
T Consensus 287 ~~Gi~~i~v~~g~ 299 (300)
T PHA02530 287 RIGLECWQVAPGD 299 (300)
T ss_pred HhCCeEEEecCCC
Confidence 9999887654343
No 64
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.47 E-value=4.2e-07 Score=82.03 Aligned_cols=90 Identities=8% Similarity=0.067 Sum_probs=66.2
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~Ii 228 (276)
..|++.+||+++.+. +.++|.|+. .+.+++.+++.++..++|..++..+.....+.... .-++ ...-+|+
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~----~~~i~i~ 189 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQ----DKNIRIH 189 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHH----hCCCeEE
Confidence 445599999999988 999999998 66799999999998888988877776543333211 1112 2233799
Q ss_pred EEcCcccccCCCCCeeeeCc
Q 023829 229 VDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~ 248 (276)
|-|+..-+.....+|+.+..
T Consensus 190 vGDs~~DI~aAk~AGi~~I~ 209 (237)
T TIGR01672 190 YGDSDNDITAAKEAGARGIR 209 (237)
T ss_pred EeCCHHHHHHHHHCCCCEEE
Confidence 99999988777777776443
No 65
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.40 E-value=6.1e-07 Score=77.05 Aligned_cols=83 Identities=18% Similarity=0.252 Sum_probs=53.9
Q ss_pred EEeeCccHHHHHHHhhhc-ceEEEEcc-CchhhHHHHHHHhcCC----------CceeEEEECCCccccCCcccccccc-
Q 023829 151 TVFERPGLREFLKQLSEF-ADLILFTA-GLEGYARPLVDRIDGE----------NLFSLRLYRPSTTSTEYREHVKDLS- 217 (276)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts-~~~~yA~~vl~~Ldp~----------~~f~~rl~r~~c~~~k~~~~~KdL~- 217 (276)
-+.+-|++.+.|+.|++. .+|++.|. ..++.|+++++.|+.. .+|.+.-....+ | ..+.+.|.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs---K-~~Hf~~i~~ 118 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGS---K-TTHFRRIHR 118 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS----H-HHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCc---h-HHHHHHHHH
Confidence 477999999999999987 99999995 5689999999999888 677765333332 1 23444443
Q ss_pred ccCcCCCcEEEEEcCccccc
Q 023829 218 CLSKDLCRTLIVDNNPFSFL 237 (276)
Q Consensus 218 ~L~rd~~~~IiVDDsp~~~~ 237 (276)
..|.+.+.++++||...+..
T Consensus 119 ~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 119 KTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp HH---GGGEEEEES-HHHHH
T ss_pred hcCCChhHEEEecCchhcce
Confidence 57899999999999987653
No 66
>PRK06769 hypothetical protein; Validated
Probab=98.35 E-value=4.8e-07 Score=77.39 Aligned_cols=99 Identities=11% Similarity=0.036 Sum_probs=66.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhh-----HHHHHHHhcCCCceeEEEE----CCCccccCCc--ccccccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGY-----ARPLVDRIDGENLFSLRLY----RPSTTSTEYR--EHVKDLSCL 219 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~y-----A~~vl~~Ldp~~~f~~rl~----r~~c~~~k~~--~~~KdL~~L 219 (276)
+...||+.++|++|++. |.++|.|++.... .......+...++.....+ .+.+...|+. .+.+.++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l 106 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKH 106 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHc
Confidence 34789999999999987 9999999987421 1223333333332222222 2333333443 678888899
Q ss_pred CcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829 220 SKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 220 ~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
+.++++|++|+|++........+|+.+.-..
T Consensus 107 ~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 107 GLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 9999999999999988777777777665443
No 67
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.32 E-value=8.4e-07 Score=78.20 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=67.3
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--Ccee--EEEECCCccccCCc------------cccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFS--LRLYRPSTTSTEYR------------EHVK 214 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~--~rl~r~~c~~~k~~------------~~~K 214 (276)
+..+||+.+||++|.+. +.++|.|++...+++++++.+ .. ..+. ..+..+.....++. ...+
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 56899999999999977 999999999999999999987 32 2332 22333222211111 1234
Q ss_pred cccccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829 215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 215 dL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~ 247 (276)
.++.++.+..+||+|.|+..-......+|+.+.
T Consensus 152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 555667788899999999988776666677544
No 68
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.27 E-value=2.9e-06 Score=71.79 Aligned_cols=93 Identities=17% Similarity=0.288 Sum_probs=66.9
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc--------------CC--ccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST--------------EY--REHVK 214 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~--------------k~--~~~~K 214 (276)
+..+||+.++|+.|.+. +.++|.|++...+++.+++.++...+|..+++.+..... .. ....|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 56999999999999876 999999999999999999998888888877764432110 00 01112
Q ss_pred --cccccCcC-CCcEEEEEcCcccccCCCCCee
Q 023829 215 --DLSCLSKD-LCRTLIVDNNPFSFLLQPLNGI 244 (276)
Q Consensus 215 --dL~~L~rd-~~~~IiVDDsp~~~~~~p~NgI 244 (276)
-++.+... .+++|+|+|+...+.....+++
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCc
Confidence 22233333 7889999999988766555443
No 69
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.25 E-value=8.7e-07 Score=76.37 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=84.0
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLI 228 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~Ii 228 (276)
+...||+.++|+.|++. |.++|.|++...+++.+++.++..++|..+++.++....|+. .|.+-++.+|.+++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~ 170 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLF 170 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEE
Confidence 44789999999999997 999999999999999999999888899999998887766654 577888899999999999
Q ss_pred EEcCcccccCCCCCeeeeCc
Q 023829 229 VDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 229 VDDsp~~~~~~p~NgI~V~~ 248 (276)
|+|++..+.....+|+.+.-
T Consensus 171 vgD~~~Di~~A~~~G~~~i~ 190 (198)
T TIGR01428 171 VASNPWDLGGAKKFGFKTAW 190 (198)
T ss_pred EeCCHHHHHHHHHCCCcEEE
Confidence 99999877777777876543
No 70
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.20 E-value=3.6e-07 Score=80.91 Aligned_cols=92 Identities=17% Similarity=0.158 Sum_probs=73.1
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccC------C--ccccccccccCcC-
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTE------Y--REHVKDLSCLSKD- 222 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k------~--~~~~KdL~~L~rd- 222 (276)
++.-|-|++||-.|.+.+ .++||++.+..|..++.+|+...+|..+++.+-....+ + .-|.|..+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 456677899999998877 99999999999999999999999999988866432111 1 1455666667876
Q ss_pred CCcEEEEEcCcccccCCCCCee
Q 023829 223 LCRTLIVDNNPFSFLLQPLNGI 244 (276)
Q Consensus 223 ~~~~IiVDDsp~~~~~~p~NgI 244 (276)
++||+++|||..+......=|+
T Consensus 178 p~~t~FfDDS~~NI~~ak~vGl 199 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTAKEVGL 199 (244)
T ss_pred cCceEEEcCchhhHHHHHhccc
Confidence 9999999999999877665554
No 71
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.20 E-value=1.1e-06 Score=75.88 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=64.0
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECC-Cc---ccc--CCccccccccccCcCCCc
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRP-ST---TST--EYREHVKDLSCLSKDLCR 225 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~-~c---~~~--k~~~~~KdL~~L~rd~~~ 225 (276)
+..+||+.++|+.|++.+.++|.|++...+++.+++.++...+|...+.-+ +. ... .......-++.++...++
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~ 146 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR 146 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence 447899999999999779999999999999999999998877775543221 10 000 111111222334445578
Q ss_pred EEEEEcCcccccCCCCCeeee
Q 023829 226 TLIVDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 226 ~IiVDDsp~~~~~~p~NgI~V 246 (276)
++.|.|+..-......+|+.|
T Consensus 147 ~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 147 VIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred EEEEeCCHHHHHHHHhCCCCE
Confidence 999999998764444444433
No 72
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=98.16 E-value=1.8e-06 Score=73.66 Aligned_cols=113 Identities=19% Similarity=0.154 Sum_probs=81.4
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
+-+.||+|+||||..... ....||+.++|+.|.+. +.+
T Consensus 24 ~v~~vv~D~Dgtl~~~~~-----------------------------------------~~~~pgv~e~L~~Lk~~g~~l 62 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPDH-----------------------------------------NEAYPALRDWIEELKAAGRKL 62 (170)
T ss_pred CCCEEEEecCCccccCCC-----------------------------------------CCcChhHHHHHHHHHHcCCEE
Confidence 568899999999996310 12579999999999987 999
Q ss_pred EEEccCc-hhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcc-cccCCCCCeeeeCcc
Q 023829 172 ILFTAGL-EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPF-SFLLQPLNGIPCIPF 249 (276)
Q Consensus 172 vI~Ts~~-~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~-~~~~~p~NgI~V~~f 249 (276)
+|.|++. ...+..+++.++...+ . .+.......+.+-++.++.+++++++|+|+.. -......+|+...-.
T Consensus 63 ~I~Sn~~~~~~~~~~~~~~gl~~~-----~--~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 63 LIVSNNAGEQRAKAVEKALGIPVL-----P--HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred EEEeCCchHHHHHHHHHHcCCEEE-----c--CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 9999998 6777777776654321 1 11111223567778888999999999999984 666666777766555
Q ss_pred CCCC
Q 023829 250 SAGQ 253 (276)
Q Consensus 250 ~~g~ 253 (276)
..|.
T Consensus 136 ~~g~ 139 (170)
T TIGR01668 136 EPLV 139 (170)
T ss_pred ccCc
Confidence 4343
No 73
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=98.11 E-value=7.1e-06 Score=78.16 Aligned_cols=124 Identities=16% Similarity=0.146 Sum_probs=83.8
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
+++.|+||-||||+.... .. |. ....-.+...||+.++|++|.+. |.+
T Consensus 1 ~~k~l~lDrDgtl~~~~~-~~----------------y~--------------~~~~~~~~l~pGV~e~L~~Lk~~G~kL 49 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPP-TD----------------FQ--------------VDSLDKLAFEPGVIPALLKLQKAGYKL 49 (354)
T ss_pred CCcEEEEeCCCCccCCCC-cc----------------cc--------------ccCcccceECcCHHHHHHHHHhCCCeE
Confidence 378999999999997421 00 00 00011256899999999999976 999
Q ss_pred EEEccC---------------chhhHHHHHHHhcCCCceeEEEEC-----CCccccCCc--cccccccccCcCCCcEEEE
Q 023829 172 ILFTAG---------------LEGYARPLVDRIDGENLFSLRLYR-----PSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 172 vI~Ts~---------------~~~yA~~vl~~Ldp~~~f~~rl~r-----~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
+|.|+. ...++..+++.++. .|..++++ ++|...|+. .+..-++.++.+++++++|
T Consensus 50 ~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmI 127 (354)
T PRK05446 50 VMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVI 127 (354)
T ss_pred EEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 999994 23445555555544 35555543 455554544 3344456678899999999
Q ss_pred EcCcccccCCCCCeeeeCcc
Q 023829 230 DNNPFSFLLQPLNGIPCIPF 249 (276)
Q Consensus 230 DDsp~~~~~~p~NgI~V~~f 249 (276)
-|+..-......+|+..--.
T Consensus 128 GDs~sDi~aAk~aGi~~I~v 147 (354)
T PRK05446 128 GDRETDVQLAENMGIKGIRY 147 (354)
T ss_pred cCCHHHHHHHHHCCCeEEEE
Confidence 99998777777788875544
No 74
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=98.06 E-value=4.5e-07 Score=81.02 Aligned_cols=99 Identities=14% Similarity=0.173 Sum_probs=83.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc-CCCceeEEEE--CCCccccCCc--cccccccccCcCC-C
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID-GENLFSLRLY--RPSTTSTEYR--EHVKDLSCLSKDL-C 224 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld-p~~~f~~rl~--r~~c~~~k~~--~~~KdL~~L~rd~-~ 224 (276)
...-||+.++++.|..+ ..+.++|++.+..++..++++. .-+.|+.... .+.+...|+. .|.+.++++|.++ +
T Consensus 91 ~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~~ 170 (222)
T KOG2914|consen 91 SILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPPS 170 (222)
T ss_pred cccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCcc
Confidence 55889999999999988 9999999999999999999876 5567877666 4455544443 7899999999988 9
Q ss_pred cEEEEEcCcccccCCCCCeeeeCccC
Q 023829 225 RTLIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 225 ~~IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
+|++++|++.........|.+|.-..
T Consensus 171 k~lVfeds~~Gv~aa~aagm~vi~v~ 196 (222)
T KOG2914|consen 171 KCLVFEDSPVGVQAAKAAGMQVVGVA 196 (222)
T ss_pred ceEEECCCHHHHHHHHhcCCeEEEec
Confidence 99999999999988888888877765
No 75
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.06 E-value=3.5e-06 Score=76.10 Aligned_cols=87 Identities=11% Similarity=0.140 Sum_probs=62.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccC----chhhHHHHHHHhcC--CCceeEEEECCCccccCCc--cccccccccCcC
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAG----LEGYARPLVDRIDG--ENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKD 222 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~vl~~Ldp--~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd 222 (276)
....||+.+||+++.+. ++|++.|+. ...+++.+++.++. ..+|..++..+.. .|+. ...+ .
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~-------~ 183 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLK-------K 183 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHH-------h
Confidence 44667799999999776 999999984 46688888887877 6778777766642 2222 2222 2
Q ss_pred CCcEEEEEcCcccccCCCCCeeeeC
Q 023829 223 LCRTLIVDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 223 ~~~~IiVDDsp~~~~~~p~NgI~V~ 247 (276)
.+-+|+|.|+..-+.....+|+.+.
T Consensus 184 ~~i~I~IGDs~~Di~aA~~AGi~~I 208 (237)
T PRK11009 184 KNIRIFYGDSDNDITAAREAGARGI 208 (237)
T ss_pred cCCeEEEcCCHHHHHHHHHcCCcEE
Confidence 2338999999988877777777653
No 76
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.97 E-value=2.9e-05 Score=77.50 Aligned_cols=112 Identities=14% Similarity=0.035 Sum_probs=76.5
Q ss_pred CCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ce
Q 023829 92 LQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-AD 170 (276)
Q Consensus 92 ~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-ye 170 (276)
...+++.||+||||+........+.. ..+ +...-||+.+.|+.|.+. |.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~-----------------------------~~d-~~~l~pgV~e~L~~L~~~Gy~ 215 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKG-----------------------------PDD-WQIIFPEIPEKLKELEADGFK 215 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCC-----------------------------HHH-eeecccCHHHHHHHHHHCCCE
Confidence 45789999999999964211111100 001 122569999999999987 99
Q ss_pred EEEEccCch------------hhHHHHHHHhcCCCceeEEEECCCccccCCc--ccccccccc----CcCCCcEEEEEcC
Q 023829 171 LILFTAGLE------------GYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCL----SKDLCRTLIVDNN 232 (276)
Q Consensus 171 lvI~Ts~~~------------~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L----~rd~~~~IiVDDs 232 (276)
|+|+|+... ..++.+++.++.. |...+..+.|...|+. .+..-++.+ +.|++++++|-|+
T Consensus 216 IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDa 293 (526)
T TIGR01663 216 ICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDA 293 (526)
T ss_pred EEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCc
Confidence 999999776 4577888887754 7766666666666654 333333333 4789999999999
Q ss_pred ccc
Q 023829 233 PFS 235 (276)
Q Consensus 233 p~~ 235 (276)
..-
T Consensus 294 agr 296 (526)
T TIGR01663 294 AGR 296 (526)
T ss_pred ccc
Confidence 844
No 77
>PLN02954 phosphoserine phosphatase
Probab=97.97 E-value=2.5e-05 Score=68.45 Aligned_cols=92 Identities=15% Similarity=0.208 Sum_probs=62.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--CceeEEEE-CCC------------ccc-cCCccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--NLFSLRLY-RPS------------TTS-TEYREHVK 214 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~~f~~rl~-r~~------------c~~-~k~~~~~K 214 (276)
...+||+.++|+.+.+. +.++|.|++.+.+++.+++.++.. .+|...+. .++ |.. .|.....+
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 44789999999999877 999999999999999999998765 46654322 110 110 11111222
Q ss_pred cccccCcCCCcEEEEEcCcccccCCCCCeee
Q 023829 215 DLSCLSKDLCRTLIVDNNPFSFLLQPLNGIP 245 (276)
Q Consensus 215 dL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~ 245 (276)
-++.++ .+++|+|-|+..-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 222333 46899999999988775555554
No 78
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.97 E-value=4.6e-06 Score=69.98 Aligned_cols=85 Identities=9% Similarity=0.066 Sum_probs=65.1
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD 230 (276)
++.+|+. -+++|++. +.++|.|+.....++.+++.+....+|... ..+...+.+-++.+|.++++|++|-
T Consensus 29 ~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vG 99 (154)
T TIGR01670 29 FNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ-------SNKLIAFSDILEKLALAPENVAYIG 99 (154)
T ss_pred EechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc-------cchHHHHHHHHHHcCCCHHHEEEEC
Confidence 4577776 79999876 999999999999999999999877766531 1222345566677888999999999
Q ss_pred cCcccccCCCCCeee
Q 023829 231 NNPFSFLLQPLNGIP 245 (276)
Q Consensus 231 Dsp~~~~~~p~NgI~ 245 (276)
|+..-.......|+.
T Consensus 100 Ds~~D~~~~~~ag~~ 114 (154)
T TIGR01670 100 DDLIDWPVMEKVGLS 114 (154)
T ss_pred CCHHHHHHHHHCCCe
Confidence 999877665556655
No 79
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=97.88 E-value=1.3e-05 Score=76.90 Aligned_cols=146 Identities=27% Similarity=0.335 Sum_probs=98.9
Q ss_pred ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023829 90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA 169 (276)
Q Consensus 90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y 169 (276)
+..++..+|.|+|.|.+|+......|.... +.....+..+. +... -.....++++.||++..|+...++.|
T Consensus 22 ~q~~~~~l~~~~~~~~~h~~~~~~~p~~~~-~~~~~~~~~~~------~~~~--~~~~~~~~~k~~~~l~~~~~~i~~~~ 92 (390)
T COG5190 22 RQDKKLILVVDLDQTIIHTTVDPNDPNNVN-QSLERTLKSVN------DRDP--VQEKCAYYVKARPKLFPFLTKISPLY 92 (390)
T ss_pred hcCcccccccccccceecccccCCCCCchh-hhhhccccchh------cccc--ccccccceeeecccccchhhhhchhc
Confidence 445678899999999999754332222211 22222221111 1001 11235788999999999999999999
Q ss_pred eEEEEccCchhhHHHHHHHhcCCC-ceeEEEE-CCCccccCCcccccccccc-CcCCCcEEEEEcCcccccCC--CCCee
Q 023829 170 DLILFTAGLEGYARPLVDRIDGEN-LFSLRLY-RPSTTSTEYREHVKDLSCL-SKDLCRTLIVDNNPFSFLLQ--PLNGI 244 (276)
Q Consensus 170 elvI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~-r~~c~~~k~~~~~KdL~~L-~rd~~~~IiVDDsp~~~~~~--p~NgI 244 (276)
++.++|.+.+.|++.+..++|+.| .|..+.. ++.- .+.-.|-++++ ..+.+.++++||.+..|..+ -.|.+
T Consensus 93 e~~~~~~~~~~~~~~~~~i~d~~g~~~~d~~~~~~~~----~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v 168 (390)
T COG5190 93 ELHIYTMGTRAYAERIAKIIDPTGKLFNDRILSRDES----GSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFV 168 (390)
T ss_pred ceeeEeeccccchhhhhhccccccccccccccccccc----ccchhhhhhhcCccccccccccccccccCCccchhhhhh
Confidence 999999999999999999999987 6665544 4432 23456777776 57888999999999998211 13455
Q ss_pred eeCc
Q 023829 245 PCIP 248 (276)
Q Consensus 245 ~V~~ 248 (276)
...+
T Consensus 169 ~~~~ 172 (390)
T COG5190 169 AKSP 172 (390)
T ss_pred cccc
Confidence 4444
No 80
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.84 E-value=1.1e-05 Score=72.07 Aligned_cols=97 Identities=14% Similarity=0.052 Sum_probs=75.6
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh---cCCCceeEEEECCCccccCCccccccccccCcCCCcEE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI---DGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTL 227 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L---dp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~I 227 (276)
....||+.++|+.+.+. +.++|+|+++....+.+++.. +..++|...+....+...+...|.+-++.+|.++++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~l 173 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREIL 173 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHEE
Confidence 45899999999999876 999999999999999888876 44456665554332222222378889999999999999
Q ss_pred EEEcCcccccCCCCCeeeeCc
Q 023829 228 IVDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 228 iVDDsp~~~~~~p~NgI~V~~ 248 (276)
+|+|+.........+|+.+.-
T Consensus 174 fVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 174 FLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred EEeCCHHHHHHHHHcCCEEEE
Confidence 999999888777778886543
No 81
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.83 E-value=0.00014 Score=66.95 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=74.4
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc---------------ccccccc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR---------------EHVKDLS 217 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~---------------~~~KdL~ 217 (276)
.-|.+-+-|..|++. .-+++||.|.+++|..-+++++..++|..++.+.+-...... .++.|..
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~ 222 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVT 222 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCC
Confidence 347888999999988 589999999999999999999999999999986653221111 1233333
Q ss_pred c---c--------------CcC-CCcEEEEEcCcccccCCCCCeeeeCccCCCCCCCh
Q 023829 218 C---L--------------SKD-LCRTLIVDNNPFSFLLQPLNGIPCIPFSAGQPHDN 257 (276)
Q Consensus 218 ~---L--------------~rd-~~~~IiVDDsp~~~~~~p~NgI~V~~f~~g~~~D~ 257 (276)
. | |.+ .+.+-+|||-+.+ ..+-+|-+.|.... ...+|-
T Consensus 223 ~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~N-n~~YD~FVnvkrcp-~P~~DW 278 (297)
T PF05152_consen 223 NVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSN-NYSYDYFVNVKRCP-VPVNDW 278 (297)
T ss_pred cCCCCCCCCeehHHHHHHcCCceeeeEEEeccCccc-CccceeEEEeccCC-CCchHH
Confidence 3 2 333 3557899999887 46778999999985 344454
No 82
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.83 E-value=1.8e-05 Score=69.58 Aligned_cols=91 Identities=13% Similarity=0.161 Sum_probs=63.0
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC--ccc-----cCCc--cccccccccCcC
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS--TTS-----TEYR--EHVKDLSCLSKD 222 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~--c~~-----~k~~--~~~KdL~~L~rd 222 (276)
+..+||+.+|++.+.+.+.++|.|++...+++++++.++...+|..++--++ ... .+.+ ..++.+...+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~-- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY-- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC--
Confidence 3589999999999998889999999999999999999998877765433222 100 1111 2344443333
Q ss_pred CCcEEEEEcCcccccCCCCCeee
Q 023829 223 LCRTLIVDNNPFSFLLQPLNGIP 245 (276)
Q Consensus 223 ~~~~IiVDDsp~~~~~~p~NgI~ 245 (276)
.+++.|-|+..-.......|+.
T Consensus 145 -~~~v~vGDs~nDl~ml~~Ag~~ 166 (203)
T TIGR02137 145 -YRVIAAGDSYNDTTMLSEAHAG 166 (203)
T ss_pred -CCEEEEeCCHHHHHHHHhCCCC
Confidence 3799999999865444334433
No 83
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=97.83 E-value=2.9e-05 Score=73.12 Aligned_cols=95 Identities=15% Similarity=0.224 Sum_probs=69.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEE-----------ECCCccccCCc--ccccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRL-----------YRPSTTSTEYR--EHVKDLS 217 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl-----------~r~~c~~~k~~--~~~KdL~ 217 (276)
+.++||+.++|+.|.+. +.++|.|++...+++.+.+.++....+...+ ..+ +...+.+ .+.+-++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-IVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-cCCcccHHHHHHHHHH
Confidence 45899999999999988 9999999999999999999987765443222 111 1111111 2334446
Q ss_pred ccCcCCCcEEEEEcCcccccCCCCCeeeeC
Q 023829 218 CLSKDLCRTLIVDNNPFSFLLQPLNGIPCI 247 (276)
Q Consensus 218 ~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~ 247 (276)
.+|.++++||.|-|+..-...-...|+.|-
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 788999999999999988776666676654
No 84
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.83 E-value=2e-05 Score=68.78 Aligned_cols=94 Identities=16% Similarity=0.066 Sum_probs=83.2
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
+..-|++.++|+.+...|+++|.|++...++...++.+....+|..+++.++.+..|+. .|..-++++|.+++++++|
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~V 177 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFV 177 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEE
Confidence 56789999999999988999999999999999999999988899999999998877765 6889999999999999999
Q ss_pred EcCcccc-cCCCCCeee
Q 023829 230 DNNPFSF-LLQPLNGIP 245 (276)
Q Consensus 230 DDsp~~~-~~~p~NgI~ 245 (276)
||+...- .....-|+.
T Consensus 178 gD~~~~di~gA~~~G~~ 194 (229)
T COG1011 178 GDSLENDILGARALGMK 194 (229)
T ss_pred CCChhhhhHHHHhcCcE
Confidence 9999987 555555665
No 85
>PLN02811 hydrolase
Probab=97.81 E-value=2.2e-05 Score=69.16 Aligned_cols=99 Identities=9% Similarity=0.038 Sum_probs=77.8
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHH-HHHHhcCCCceeEEEECC--CccccCCc--cccccccccC---cC
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARP-LVDRIDGENLFSLRLYRP--STTSTEYR--EHVKDLSCLS---KD 222 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~-vl~~Ldp~~~f~~rl~r~--~c~~~k~~--~~~KdL~~L~---rd 222 (276)
....||+.++|+.|++. +.++|.|++.+.+... ..+......+|..+++.+ ++...|+. .|.+-++.++ .+
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 156 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD 156 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence 34689999999999987 9999999998876554 333334456888899888 66555544 6778888886 88
Q ss_pred CCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829 223 LCRTLIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 223 ~~~~IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
+++||+|+|+...+.....+|+.+.-..
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~~i~v~ 184 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMSVVMVP 184 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCeEEEEe
Confidence 9999999999999888888888777664
No 86
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.57 E-value=0.0002 Score=60.05 Aligned_cols=84 Identities=23% Similarity=0.375 Sum_probs=58.2
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC------------ccccCC-cccccc-c
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS------------TTSTEY-REHVKD-L 216 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~------------c~~~k~-~~~~Kd-L 216 (276)
+..+||+.++++.+.+. +.++|.|++...+++++++.++...+|...+.-+. |..... ...++. +
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 44789999999999877 99999999999999999999987777665544321 100000 011222 2
Q ss_pred cccCcCCCcEEEEEcCccc
Q 023829 217 SCLSKDLCRTLIVDNNPFS 235 (276)
Q Consensus 217 ~~L~rd~~~~IiVDDsp~~ 235 (276)
+..+.+.++++.|-|+..-
T Consensus 152 ~~~~~~~~~~~~iGDs~~D 170 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVND 170 (177)
T ss_pred HHhCCCHHHEEEEeCCHHH
Confidence 3345567888999888654
No 87
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.53 E-value=0.00017 Score=64.54 Aligned_cols=78 Identities=5% Similarity=-0.007 Sum_probs=56.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHH--HHHHHhcCCC-ceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR--PLVDRIDGEN-LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~--~vl~~Ldp~~-~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV 229 (276)
.-||+.++|+.|.+. +.++|.|++.+..++ ..++.++... .|..+++...... .....-++.++.+.+++++|
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~---~~l~~~~~~~~~~~~~~~~v 101 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAV---QMILESKKRFDIRNGIIYLL 101 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHH---HHHHhhhhhccCCCceEEEe
Confidence 479999999999987 999999999988776 6778888776 7888877665322 11222234455566778887
Q ss_pred EcCcc
Q 023829 230 DNNPF 234 (276)
Q Consensus 230 DDsp~ 234 (276)
-|+..
T Consensus 102 Gd~~~ 106 (242)
T TIGR01459 102 GHLEN 106 (242)
T ss_pred CCccc
Confidence 77654
No 88
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.45 E-value=5.3e-05 Score=65.32 Aligned_cols=78 Identities=9% Similarity=0.089 Sum_probs=57.4
Q ss_pred HHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCC
Q 023829 162 LKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQP 240 (276)
Q Consensus 162 L~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p 240 (276)
++.+.+. ++++|.|+.....+..+++.+....+|.. ...+...+.+-++.+|.+++++++|-|+..-.....
T Consensus 57 i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g-------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~ 129 (183)
T PRK09484 57 IRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG-------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVME 129 (183)
T ss_pred HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC-------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHH
Confidence 4445544 99999999999999999999887666641 112223556667788999999999999988776655
Q ss_pred CCeeee
Q 023829 241 LNGIPC 246 (276)
Q Consensus 241 ~NgI~V 246 (276)
..|+.+
T Consensus 130 ~aG~~~ 135 (183)
T PRK09484 130 KVGLSV 135 (183)
T ss_pred HCCCeE
Confidence 556654
No 89
>PRK08238 hypothetical protein; Validated
Probab=97.44 E-value=0.00039 Score=68.86 Aligned_cols=79 Identities=14% Similarity=0.060 Sum_probs=55.6
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc-cccccccccCcCCCcEEEEE
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR-EHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~-~~~KdL~~L~rd~~~~IiVD 230 (276)
..+||+.++++.+++. ++++|.|++.+.+++++++.++. |+.++..+.....+.. .-.+-.+.++ .++++++-
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yvG 146 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYAG 146 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEec
Confidence 3789999999999877 99999999999999999999864 7888877654333211 1111112223 35577788
Q ss_pred cCcccc
Q 023829 231 NNPFSF 236 (276)
Q Consensus 231 Dsp~~~ 236 (276)
|+..-.
T Consensus 147 DS~~Dl 152 (479)
T PRK08238 147 NSAADL 152 (479)
T ss_pred CCHHHH
Confidence 877543
No 90
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=97.43 E-value=3.8e-05 Score=64.65 Aligned_cols=79 Identities=8% Similarity=0.012 Sum_probs=68.7
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
+..+||+.++|+. ++|.|++.+.+.+.+++++....+|..+++.+++...|+. .|.+-++++|.++++|++|
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 4589999999993 7899999999999999999888899988888877666654 6888999999999999999
Q ss_pred EcCcccc
Q 023829 230 DNNPFSF 236 (276)
Q Consensus 230 DDsp~~~ 236 (276)
+|++...
T Consensus 163 gD~~~Di 169 (175)
T TIGR01493 163 AAHQWDL 169 (175)
T ss_pred ecChhhH
Confidence 9997543
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.32 E-value=0.0004 Score=64.14 Aligned_cols=86 Identities=13% Similarity=0.205 Sum_probs=60.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC----CceeEEEE-C-CCccccCCcc----ccc------
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE----NLFSLRLY-R-PSTTSTEYRE----HVK------ 214 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~----~~f~~rl~-r-~~c~~~k~~~----~~K------ 214 (276)
+.+|||+.+|++.|.++ ..++|+|+|...+++.+++.++.. ..++.++- . +.+.....+. +.|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 67999999999999887 999999999999999999987653 23344432 2 2222122221 222
Q ss_pred -cccccC--cCCCcEEEEEcCccccc
Q 023829 215 -DLSCLS--KDLCRTLIVDNNPFSFL 237 (276)
Q Consensus 215 -dL~~L~--rd~~~~IiVDDsp~~~~ 237 (276)
..+.++ .+.++||+|.|+..-..
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ 225 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLR 225 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhh
Confidence 223345 68899999999998654
No 92
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.27 E-value=0.00035 Score=62.00 Aligned_cols=87 Identities=14% Similarity=0.187 Sum_probs=65.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCC-----------ccccCCcc-ccccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPS-----------TTSTEYRE-HVKDLSC 218 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~-----------c~~~k~~~-~~KdL~~ 218 (276)
..++||+.+.++++++. ++++|.|+|-..+++++.+.+.....+..++..++ |....... ...-++.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 67899999999999998 99999999999999999999998877766665554 21100001 1122344
Q ss_pred cCcCCCcEEEEEcCcccccC
Q 023829 219 LSKDLCRTLIVDNNPFSFLL 238 (276)
Q Consensus 219 L~rd~~~~IiVDDsp~~~~~ 238 (276)
+|.++++++.+=|+..-...
T Consensus 156 ~g~~~~~~~a~gDs~nDlpm 175 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPM 175 (212)
T ss_pred cCCCHHHeEEEcCchhhHHH
Confidence 68889999999999876644
No 93
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.25 E-value=0.0012 Score=60.56 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=49.7
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc----eeEEEECCCccccCCccccccccccCcCCCcE
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL----FSLRLYRPSTTSTEYREHVKDLSCLSKDLCRT 226 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~----f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~ 226 (276)
...-||+.+||+++.+. ..+++.|+....+.+...+.|...++ +..++.++.- ..|.. -.+. +...-.=+
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-~~K~~-rr~~---I~~~y~Iv 191 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-SSKES-RRQK---VQKDYEIV 191 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC-CCcHH-HHHH---HHhcCCEE
Confidence 33689999999999887 89999999987777755555544432 4677777642 22211 1111 11111116
Q ss_pred EEEEcCcccc
Q 023829 227 LIVDNNPFSF 236 (276)
Q Consensus 227 IiVDDsp~~~ 236 (276)
+.|.|+..-+
T Consensus 192 l~vGD~~~Df 201 (266)
T TIGR01533 192 LLFGDNLLDF 201 (266)
T ss_pred EEECCCHHHh
Confidence 7788776655
No 94
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.23 E-value=0.00019 Score=64.19 Aligned_cols=91 Identities=14% Similarity=0.031 Sum_probs=72.2
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiV 229 (276)
+..-||+.++|+.|++.|.++|.|++... ++..+..++|..++..+.....|+. .|.+-++.+|.++++||+|
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 34569999999999988999999998875 3556667789999888776655554 6778888999999999999
Q ss_pred EcCc-ccccCCCCCeeeeC
Q 023829 230 DNNP-FSFLLQPLNGIPCI 247 (276)
Q Consensus 230 DDsp-~~~~~~p~NgI~V~ 247 (276)
.|++ .-+.....+|+.+.
T Consensus 187 GD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred cCCcHHHHHHHHHCCCeEE
Confidence 9995 66666666777654
No 95
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.19 E-value=0.0014 Score=55.48 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=43.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCch-------hhHHHHHHHh----cCCCceeEEEE-CCCccccCCc--cccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLE-------GYARPLVDRI----DGENLFSLRLY-RPSTTSTEYR--EHVKDL 216 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~-------~yA~~vl~~L----dp~~~f~~rl~-r~~c~~~k~~--~~~KdL 216 (276)
...-|++-+-|+.+.+. |.|+|+|+..- .-.+.+.+++ ..-+....+++ .+.....|++ .+..-+
T Consensus 28 ~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 28 KFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp EEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred hhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceEEEecCCCCCCCCCchhHHHHHH
Confidence 44667899999999987 99999998621 2222222222 12232222222 2222233333 333333
Q ss_pred ccc----CcCCCcEEEEEcCccc
Q 023829 217 SCL----SKDLCRTLIVDNNPFS 235 (276)
Q Consensus 217 ~~L----~rd~~~~IiVDDsp~~ 235 (276)
+.+ ..|.++.++|=|+...
T Consensus 108 ~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 108 KDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp CCTSTT--S-CCC-EEEESSCHC
T ss_pred HhccccccccccceEEEeccCCC
Confidence 333 3588999999987654
No 96
>PTZ00445 p36-lilke protein; Provisional
Probab=97.09 E-value=0.00032 Score=62.24 Aligned_cols=134 Identities=10% Similarity=0.037 Sum_probs=84.2
Q ss_pred ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023829 90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF- 168 (276)
Q Consensus 90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~- 168 (276)
+..+-+.|++|||.|||.. ++. .+.+.. .+ ...+.-..+|.+.++++.|.+.
T Consensus 39 ~~~GIk~Va~D~DnTlI~~-Hsg---G~~~~~-------------------~~----~~~~~~~~tpefk~~~~~l~~~~ 91 (219)
T PTZ00445 39 NECGIKVIASDFDLTMITK-HSG---GYIDPD-------------------ND----DIRVLTSVTPDFKILGKRLKNSN 91 (219)
T ss_pred HHcCCeEEEecchhhhhhh-hcc---cccCCC-------------------cc----hhhhhccCCHHHHHHHHHHHHCC
Confidence 4457899999999999952 110 000000 00 0122344899999999999976
Q ss_pred ceEEEEccCchhh-----------HHHHHHHhcC-CC---ceeEEE------ECCC-----ccccCCc--c--c--cccc
Q 023829 169 ADLILFTAGLEGY-----------ARPLVDRIDG-EN---LFSLRL------YRPS-----TTSTEYR--E--H--VKDL 216 (276)
Q Consensus 169 yelvI~Ts~~~~y-----------A~~vl~~Ldp-~~---~f~~rl------~r~~-----c~~~k~~--~--~--~KdL 216 (276)
+.|+|.|-+.+.. .+++++..-. .+ .+..++ +.+. +...|+. . | .+-+
T Consensus 92 I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll 171 (219)
T PTZ00445 92 IKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVC 171 (219)
T ss_pred CeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHH
Confidence 9999999988855 2333333211 11 122211 2221 1112222 2 4 5566
Q ss_pred cccCcCCCcEEEEEcCcccccCCCCCeeeeCccC
Q 023829 217 SCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 217 ~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
++.|.++++|++|||++.++.....-|+..--|.
T Consensus 172 ~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 172 SDFNVNPDEILFIDDDMNNCKNALKEGYIALHVT 205 (219)
T ss_pred HHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence 7779999999999999999988888899888886
No 97
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.96 E-value=0.0018 Score=55.37 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=91.5
Q ss_pred ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-
Q 023829 90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF- 168 (276)
Q Consensus 90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~- 168 (276)
...+.+.+|+|||+|||-=.. -..=|-+.+-+..+.+.
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd~-----------------------------------------~~~tpe~~~W~~e~k~~g 62 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWDN-----------------------------------------PDATPELRAWLAELKEAG 62 (175)
T ss_pred HHcCCcEEEEeccCceecccC-----------------------------------------CCCCHHHHHHHHHHHhcC
Confidence 344789999999999995110 01357788999999988
Q ss_pred ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccc-cCCCCC---ee
Q 023829 169 ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSF-LLQPLN---GI 244 (276)
Q Consensus 169 yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~-~~~p~N---gI 244 (276)
..++|.|+.++.-+..+++.||-..+.... -.. ...+.|.|..++-++++|+.|=|.-.-= .....+ .|
T Consensus 63 i~v~vvSNn~e~RV~~~~~~l~v~fi~~A~-----KP~--~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tI 135 (175)
T COG2179 63 IKVVVVSNNKESRVARAAEKLGVPFIYRAK-----KPF--GRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTI 135 (175)
T ss_pred CEEEEEeCCCHHHHHhhhhhcCCceeeccc-----Ccc--HHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEE
Confidence 999999999999999999998876443321 110 1257899999999999999999987632 223334 45
Q ss_pred eeCccCCCCCCChHHhHH--HHHHHHhhhc
Q 023829 245 PCIPFSAGQPHDNQVLTN--VTLLKFLLSS 272 (276)
Q Consensus 245 ~V~~f~~g~~~D~eL~~l--~~~L~~La~~ 272 (276)
.|.|-...+.--+.+.+. ..+++.|.+.
T Consensus 136 lV~Pl~~~d~~~t~~nR~~Er~v~~~l~~k 165 (175)
T COG2179 136 LVEPLVAPDGWITKINRWRERRVLKKLGKK 165 (175)
T ss_pred EEEEeccccchhhhhhHHHHHHHHHHHHHh
Confidence 667765322211222222 3566666554
No 98
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=96.95 E-value=0.002 Score=56.03 Aligned_cols=85 Identities=16% Similarity=0.202 Sum_probs=60.3
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccC----chhhHHH--------HHHHhcCCC-ceeEEEECCC-----ccccCCc--c
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAG----LEGYARP--------LVDRIDGEN-LFSLRLYRPS-----TTSTEYR--E 211 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~----~~~yA~~--------vl~~Ldp~~-~f~~rl~r~~-----c~~~k~~--~ 211 (276)
.+.||+.+=|..+.+. |.+||+|+. ...+... +.+.|...+ .|+.++++.| |...|+. .
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm 110 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGM 110 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHH
Confidence 3789999999999887 999999992 2233333 444444444 6899999765 4444443 4
Q ss_pred ccccccccCcCCCcEEEEEcCccccc
Q 023829 212 HVKDLSCLSKDLCRTLIVDNNPFSFL 237 (276)
Q Consensus 212 ~~KdL~~L~rd~~~~IiVDDsp~~~~ 237 (276)
+..-++..+.|+++.++|=|+..-..
T Consensus 111 ~~~~~~~~~iD~~~s~~VGD~~~Dlq 136 (181)
T COG0241 111 LLSALKEYNIDLSRSYVVGDRLTDLQ 136 (181)
T ss_pred HHHHHHHhCCCccceEEecCcHHHHH
Confidence 55666777889999999999965443
No 99
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.94 E-value=0.0019 Score=50.62 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.3
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
.=||+.+|++.|.+. ..+++.|+++..-.+.++++|..-|
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G 55 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG 55 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence 469999999999987 9999999999877777777775444
No 100
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=96.68 E-value=0.0012 Score=56.64 Aligned_cols=117 Identities=13% Similarity=0.076 Sum_probs=77.6
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhh-cceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSE-FADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~-~yel 171 (276)
.-+++|||.||||-+-.- + ...+|..+ .-+..|-|.--. .|.+ .+.+
T Consensus 6 ~i~~~v~d~dGv~tdg~~------------------~---------~~~~g~~~---~~~~~~D~~~~~--~L~~~Gi~l 53 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRI------------------V---------INDEGIES---RNFDIKDGMGVI--VLQLCGIDV 53 (169)
T ss_pred cCeEEEEeCceeeECCeE------------------E---------EcCCCcEE---EEEecchHHHHH--HHHHCCCEE
Confidence 468999999999997310 0 01122211 113355555432 3433 4999
Q ss_pred EEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcCcccccCCCCCeeeeCc
Q 023829 172 ILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNNPFSFLLQPLNGIPCIP 248 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDsp~~~~~~p~NgI~V~~ 248 (276)
+|.|+....+++.+++.+....+|... ..+...+.+-++.++.++++|+.|-|+..-.......|+.+-.
T Consensus 54 aIiT~k~~~~~~~~l~~lgi~~~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am 123 (169)
T TIGR02726 54 AIITSKKSGAVRHRAEELKIKRFHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV 123 (169)
T ss_pred EEEECCCcHHHHHHHHHCCCcEEEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC
Confidence 999999999999999999888777642 1223356667777888999999999998775544445544433
No 101
>PRK11590 hypothetical protein; Provisional
Probab=96.64 E-value=0.0033 Score=55.15 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=34.2
Q ss_pred EeeCccHHHHH-HHhhh-cceEEEEccCchhhHHHHHHHhc
Q 023829 152 VFERPGLREFL-KQLSE-FADLILFTAGLEGYARPLVDRID 190 (276)
Q Consensus 152 v~~RPgl~eFL-~~l~~-~yelvI~Ts~~~~yA~~vl~~Ld 190 (276)
+..+||+.+.| +.+.+ .+.++|.|++...+++++++.+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 34689999999 56875 59999999999999999999876
No 102
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.55 E-value=0.0058 Score=55.61 Aligned_cols=59 Identities=27% Similarity=0.224 Sum_probs=48.1
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
..+.+++||||||+++.. ...|...+.|+.|.+. +.+
T Consensus 3 ~~kli~~DlDGTLl~~~~------------------------------------------~~~~~~~~ai~~l~~~Gi~~ 40 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHT------------------------------------------YSYEPAKPALKALKEKGIPV 40 (273)
T ss_pred cceEEEEcCcccCcCCCC------------------------------------------cCcHHHHHHHHHHHHCCCEE
Confidence 367899999999997411 0346678899999987 999
Q ss_pred EEEccCchhhHHHHHHHhcCCC
Q 023829 172 ILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
+|.|.-....+..+++.++...
T Consensus 41 ~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 41 IPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred EEEcCCCHHHHHHHHHHcCCCC
Confidence 9999999999999999987654
No 103
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.53 E-value=0.01 Score=48.61 Aligned_cols=49 Identities=6% Similarity=0.061 Sum_probs=37.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHH------------HHHHHhcCCCc-eeEEEECC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR------------PLVDRIDGENL-FSLRLYRP 202 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~------------~vl~~Ldp~~~-f~~rl~r~ 202 (276)
..+.+.+.|+.+.+. ++++++|+-...... .+.+.|+.++. +..++.|.
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCC
Confidence 678888999998665 999999988887766 77778877763 55555554
No 104
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.49 E-value=0.0046 Score=54.22 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=62.1
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce-e--EEEECCCccccCCc--c----------cccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF-S--LRLYRPSTTSTEYR--E----------HVKD 215 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f-~--~rl~r~~c~~~k~~--~----------~~Kd 215 (276)
+..|||+.+||+.+.+. +.++|.|++...+++++++.+.....| . ..+..+.....++. . -.+-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~ 148 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSL 148 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHH
Confidence 67999999999999987 999999999999999999998543333 2 22222221111111 0 1233
Q ss_pred ccccCcCCCcEEEEEcCcccccCCCCCee
Q 023829 216 LSCLSKDLCRTLIVDNNPFSFLLQPLNGI 244 (276)
Q Consensus 216 L~~L~rd~~~~IiVDDsp~~~~~~p~NgI 244 (276)
++.++...+++|.|-|+..-+.....+++
T Consensus 149 l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 149 IRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 44445567889999999887654444444
No 105
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=96.40 E-value=0.013 Score=50.29 Aligned_cols=96 Identities=16% Similarity=0.200 Sum_probs=61.6
Q ss_pred ccCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcc
Q 023829 90 ERLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFA 169 (276)
Q Consensus 90 ~~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~y 169 (276)
+..+-+.||||+|+||..-+. -..-|.+.+.+++|.+.|
T Consensus 37 k~~Gik~li~DkDNTL~~~~~-----------------------------------------~~i~~~~~~~~~~l~~~~ 75 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYE-----------------------------------------DEIPPEYAEWLNELKKQF 75 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCc-----------------------------------------CcCCHHHHHHHHHHHHHC
Confidence 345789999999999985321 114577888899999874
Q ss_pred ---eEEEEccCc-------hhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccC-----cCCCcEEEEEcCcc
Q 023829 170 ---DLILFTAGL-------EGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLS-----KDLCRTLIVDNNPF 234 (276)
Q Consensus 170 ---elvI~Ts~~-------~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~-----rd~~~~IiVDDsp~ 234 (276)
.++|+|++. ..-|+.+-+.+... .+.+. + .|++.+.+-++.++ ..++++++|-|.-.
T Consensus 76 ~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-vl~h~-----~--kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 76 GKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-VLRHR-----A--KKPGCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred CCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-EEEeC-----C--CCCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 399999984 56677777776622 12221 1 12332222223332 35899999999865
No 106
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.33 E-value=0.0038 Score=61.38 Aligned_cols=92 Identities=16% Similarity=0.152 Sum_probs=61.2
Q ss_pred HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeE-EEECCCcccc-CCccccccccccCcCCCcEEEEEcCcc
Q 023829 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSL-RLYRPSTTST-EYREHVKDLSCLSKDLCRTLIVDNNPF 234 (276)
Q Consensus 158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~-rl~r~~c~~~-k~~~~~KdL~~L~rd~~~~IiVDDsp~ 234 (276)
+++|...+.+. +=+.|-|-....-|+.+.++ -|+=.+.. -+..-+|-.. |-....|-.++||-..+..|++||+|.
T Consensus 260 fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~k-hp~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ 338 (574)
T COG3882 260 FQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK-HPDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPA 338 (574)
T ss_pred HHHHHHHHHhccEEEEEecCCchhhHHHHHhh-CCCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHH
Confidence 56777778777 78899999999999988886 22211110 0111122221 112567888889999999999999999
Q ss_pred cccCCCCCe-eeeCccC
Q 023829 235 SFLLQPLNG-IPCIPFS 250 (276)
Q Consensus 235 ~~~~~p~Ng-I~V~~f~ 250 (276)
....-..++ +.|.+|.
T Consensus 339 ErE~vk~~~~v~Vi~~~ 355 (574)
T COG3882 339 ERELVKRELPVSVIEFP 355 (574)
T ss_pred HHHHHHhcCceeeccCC
Confidence 876544443 7777774
No 107
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.30 E-value=0.01 Score=53.34 Aligned_cols=59 Identities=22% Similarity=0.237 Sum_probs=48.3
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
..+.|++||||||+.+.+. ..|...+.|+.+.+. +.+
T Consensus 2 ~~kli~~DlDGTLl~~~~~------------------------------------------i~~~~~~al~~~~~~g~~v 39 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKT------------------------------------------ISPETKEALARLREKGVKV 39 (264)
T ss_pred CeeEEEEcCCCCccCCCCc------------------------------------------cCHHHHHHHHHHHHCCCEE
Confidence 3688999999999985321 466777888888766 999
Q ss_pred EEEccCchhhHHHHHHHhcCCC
Q 023829 172 ILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
+|.|.-....+.++++.|...+
T Consensus 40 ~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 40 VLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred EEECCCChHHHHHHHHHcCCCc
Confidence 9999999999999999998876
No 108
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.26 E-value=0.0011 Score=57.21 Aligned_cols=82 Identities=22% Similarity=0.367 Sum_probs=48.8
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchh----hHHHHHHHhcCC--Cc-eeEEEECCCccccCCccccccccccCcCC
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEG----YARPLVDRIDGE--NL-FSLRLYRPSTTSTEYREHVKDLSCLSKDL 223 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~----yA~~vl~~Ldp~--~~-f~~rl~r~~c~~~k~~~~~KdL~~L~rd~ 223 (276)
...-||+.|.|+.|.+. +++++.|+.... .++.-.+.|+.. +. +..+++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~----------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD----------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS----------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC----------CC--eEecc-
Confidence 45779999999999998 588888877665 345555555544 22 223333221 11 23434
Q ss_pred CcEEEEEcCcccccCCCCCeeeeCcc
Q 023829 224 CRTLIVDNNPFSFLLQPLNGIPCIPF 249 (276)
Q Consensus 224 ~~~IiVDDsp~~~~~~p~NgI~V~~f 249 (276)
|+|||++.........|+++.=|
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~iLf 161 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPVILF 161 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEEEEE
T ss_pred ---EEecCChHHHHhccCCCceEEEE
Confidence 89999999987777777555444
No 109
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.05 E-value=0.016 Score=50.50 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=31.1
Q ss_pred CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
-|...+-|+.+.+. +.++|.|.-....++.+.+.++...
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG 59 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC
Confidence 45666778888877 8899999888888888888887664
No 110
>PRK10444 UMP phosphatase; Provisional
Probab=96.02 E-value=0.014 Score=52.87 Aligned_cols=40 Identities=25% Similarity=0.367 Sum_probs=32.6
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
.=||..++++.|.+. ..+++.|+....-.+.++++|..-|
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G 58 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAG 58 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 358899999999976 8899999999888888888875433
No 111
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.91 E-value=0.041 Score=48.04 Aligned_cols=43 Identities=26% Similarity=0.590 Sum_probs=39.0
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~ 194 (276)
+..|||.++|.+++.++ ..++|.|+|+.-|.+++++.+--+..
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~ 115 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKER 115 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccc
Confidence 66899999999999998 99999999999999999999865443
No 112
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.90 E-value=0.028 Score=50.55 Aligned_cols=37 Identities=11% Similarity=0.162 Sum_probs=29.1
Q ss_pred ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
|...+-|+.+.+. +.++|.|.-....+..+++.+...
T Consensus 23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred HHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 3345677888877 889999988888888899888754
No 113
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.88 E-value=0.023 Score=49.74 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=24.4
Q ss_pred ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
|...+-|+.+.+. ..++|.|.-....+.++++.+....
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 4445556666655 6777777777777777777766543
No 114
>PLN02645 phosphoglycolate phosphatase
Probab=95.75 E-value=0.02 Score=53.44 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=30.8
Q ss_pred ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
||+.++|+.|.+. ..+++.|+......+.++++|..-
T Consensus 47 ~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l 84 (311)
T PLN02645 47 EGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL 84 (311)
T ss_pred cCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC
Confidence 8999999999976 999999999977777777666443
No 115
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.75 E-value=0.023 Score=50.56 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=31.0
Q ss_pred ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
|...++|+++.+. ..+++.|.-+...+..+++.++..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4578899999987 999999988888888888888754
No 116
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.68 E-value=0.025 Score=49.08 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=27.7
Q ss_pred CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
-|...+.|+.+.+. ..+++.|.-....+..+++.+...
T Consensus 17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 34556777777755 888888888888888888876544
No 117
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.58 E-value=0.028 Score=50.35 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=25.5
Q ss_pred ccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 156 PGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 156 Pgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
|...+.|+++.+. +.++|.|......+..+++.+...
T Consensus 19 ~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 19 PSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455667777766 777777777777777777776554
No 118
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.56 E-value=0.031 Score=48.82 Aligned_cols=35 Identities=20% Similarity=0.165 Sum_probs=30.7
Q ss_pred HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
..+.|+.+.+. ..+++.|......++.+++.+...
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 56888888877 899999999999999999998754
No 119
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.56 E-value=0.046 Score=49.37 Aligned_cols=54 Identities=20% Similarity=0.325 Sum_probs=45.6
Q ss_pred EeeCccHHHHHHHhhh---cceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcc
Q 023829 152 VFERPGLREFLKQLSE---FADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTT 205 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~---~yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~ 205 (276)
+..-||..+|++++++ .++++|-|.|..-|.+.+++.-+..+.|+.+++...+.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~ 126 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACF 126 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCcee
Confidence 4489999999999954 49999999999999999999998888777776655443
No 120
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.56 E-value=0.024 Score=51.49 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=27.7
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld 190 (276)
.=||..++++.|.+. ..+++.|+.+..-.+.+.+++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~ 59 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQ 59 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHH
Confidence 357999999999987 9999999876665445555443
No 121
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=95.53 E-value=0.032 Score=50.46 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=13.1
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
.+++++||||||+.+
T Consensus 2 ~kli~~DlDGTLl~~ 16 (272)
T PRK15126 2 ARLAAFDMDGTLLMP 16 (272)
T ss_pred ccEEEEeCCCcCcCC
Confidence 468999999999975
No 122
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.47 E-value=0.04 Score=49.39 Aligned_cols=15 Identities=40% Similarity=0.525 Sum_probs=13.2
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
.+++++||||||++.
T Consensus 3 ~kli~~DlDGTLl~~ 17 (272)
T PRK10530 3 YRVIALDLDGTLLTP 17 (272)
T ss_pred ccEEEEeCCCceECC
Confidence 578999999999975
No 123
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=95.42 E-value=0.031 Score=49.26 Aligned_cols=37 Identities=22% Similarity=0.124 Sum_probs=32.9
Q ss_pred eeCccHHHHHH-Hhhh-cceEEEEccCchhhHHHHHHHh
Q 023829 153 FERPGLREFLK-QLSE-FADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 153 ~~RPgl~eFL~-~l~~-~yelvI~Ts~~~~yA~~vl~~L 189 (276)
..+||+.+.|+ .+.+ -+.++|.|++...+++++++..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 47999999995 7885 5999999999999999999773
No 124
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.39 E-value=0.037 Score=50.66 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=26.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L 189 (276)
.-||+.++|++|.+. ..+++.|+.+..-...+++++
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l 55 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF 55 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 357899999999976 889999986654444444444
No 125
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.38 E-value=0.04 Score=50.06 Aligned_cols=58 Identities=22% Similarity=0.224 Sum_probs=42.2
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
.++.+++||||||++..+ .. -|-..+-|+++.+. ..+
T Consensus 6 ~~~lI~~DlDGTLL~~~~--~i----------------------------------------~~~~~~ai~~l~~~Gi~~ 43 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHT--YD----------------------------------------WQPAAPWLTRLREAQVPV 43 (271)
T ss_pred CCeEEEEeCccCCcCCCC--cC----------------------------------------cHHHHHHHHHHHHcCCeE
Confidence 478999999999997421 11 12244557777766 888
Q ss_pred EEEccCchhhHHHHHHHhcCC
Q 023829 172 ILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
+|.|.-....+.++++.++..
T Consensus 44 viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 44 ILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred EEEcCCCHHHHHHHHHHhCCC
Confidence 888888888888888888654
No 126
>PRK10976 putative hydrolase; Provisional
Probab=95.35 E-value=0.041 Score=49.47 Aligned_cols=15 Identities=40% Similarity=0.423 Sum_probs=13.1
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
.+++++||||||+++
T Consensus 2 ikli~~DlDGTLl~~ 16 (266)
T PRK10976 2 YQVVASDLDGTLLSP 16 (266)
T ss_pred ceEEEEeCCCCCcCC
Confidence 368999999999975
No 127
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.23 E-value=0.045 Score=51.15 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=29.8
Q ss_pred HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
..+-|+.|.+. ..+++.|+-+..-+..+.+.+....
T Consensus 23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 56678888877 9999999998888888999887654
No 128
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.21 E-value=0.046 Score=46.12 Aligned_cols=36 Identities=19% Similarity=0.404 Sum_probs=28.7
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHH---HHHHHh
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYAR---PLVDRI 189 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~---~vl~~L 189 (276)
..|++.++++.+.+. |.+++.|+.....+. ..++.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 479999999999988 888888888777664 566554
No 129
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=94.99 E-value=0.039 Score=51.75 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=22.1
Q ss_pred CccHHHHHHHhhh-----cceEEEEccCc----hhhHHHHHHHh
Q 023829 155 RPGLREFLKQLSE-----FADLILFTAGL----EGYARPLVDRI 189 (276)
Q Consensus 155 RPgl~eFL~~l~~-----~yelvI~Ts~~----~~yA~~vl~~L 189 (276)
-||+.++++.|.. ...+++.|+.. +.+++.+.+.+
T Consensus 18 i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 18 IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred cHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 5777777777775 57777777665 34455443443
No 130
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.93 E-value=0.058 Score=48.65 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=23.3
Q ss_pred CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L 189 (276)
=|+..++|+.|.+. ..+++.|+++..-.+.+.+.+
T Consensus 19 i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l 54 (249)
T TIGR01457 19 IPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML 54 (249)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 36788999999877 888888874433333344433
No 131
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=94.87 E-value=0.022 Score=48.83 Aligned_cols=91 Identities=18% Similarity=0.178 Sum_probs=63.0
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEEC-CC-ccccC---------Cc--cccccccc
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYR-PS-TTSTE---------YR--EHVKDLSC 218 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r-~~-c~~~k---------~~--~~~KdL~~ 218 (276)
..+||+.++|+.+.+. +.++|.|++...+++++++.++...+|..++.. ++ ....+ .+ ....-++.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~ 166 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAE 166 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHH
Confidence 4799999999999876 999999999999999999999888777654332 11 11100 00 01122234
Q ss_pred cCcCCCcEEEEEcCcccccCCCCCe
Q 023829 219 LSKDLCRTLIVDNNPFSFLLQPLNG 243 (276)
Q Consensus 219 L~rd~~~~IiVDDsp~~~~~~p~Ng 243 (276)
.+.++++++.+-|++.-...-...|
T Consensus 167 ~~~~~~~~~~~gDs~~D~~~~~~a~ 191 (202)
T TIGR01490 167 EQIDLKDSYAYGDSISDLPLLSLVG 191 (202)
T ss_pred cCCCHHHcEeeeCCcccHHHHHhCC
Confidence 4667889999999987765443333
No 132
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=94.81 E-value=0.013 Score=52.97 Aligned_cols=94 Identities=12% Similarity=-0.008 Sum_probs=73.5
Q ss_pred CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCc--cccccccccCcCCCcEEEEEc
Q 023829 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYR--EHVKDLSCLSKDLCRTLIVDN 231 (276)
Q Consensus 155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~--~~~KdL~~L~rd~~~~IiVDD 231 (276)
=.+..++|+.+++. +.|+|.|+...++= .++..++...+|++++..-..+..|+. .|.+.|++++..++.||.|||
T Consensus 115 ~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD 193 (237)
T KOG3085|consen 115 LDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHIGD 193 (237)
T ss_pred ccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEecC
Confidence 34455999999988 89999999998876 777777877899988765555555554 789999999999999999999
Q ss_pred Cccc-ccCCCCCeeeeCcc
Q 023829 232 NPFS-FLLQPLNGIPCIPF 249 (276)
Q Consensus 232 sp~~-~~~~p~NgI~V~~f 249 (276)
+..+ +.....-|+.-.-+
T Consensus 194 ~l~nD~~gA~~~G~~ailv 212 (237)
T KOG3085|consen 194 LLENDYEGARNLGWHAILV 212 (237)
T ss_pred ccccccHhHHHcCCEEEEE
Confidence 9998 65555445544444
No 133
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=94.76 E-value=0.056 Score=48.54 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=30.5
Q ss_pred cHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC
Q 023829 157 GLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 157 gl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
...+.++.+.+. ..+++.|.-....+..+++.++..
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 467889999887 899999988889899999988753
No 134
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=94.69 E-value=0.067 Score=46.54 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=19.6
Q ss_pred HHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023829 158 LREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (276)
Q Consensus 158 l~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld 190 (276)
..+-|+.+.+. ..+++.|.-....+..+++.+.
T Consensus 20 ~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~ 53 (225)
T TIGR01482 20 ALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG 53 (225)
T ss_pred HHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence 34445555555 6666666666666666666665
No 135
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=94.66 E-value=0.11 Score=43.71 Aligned_cols=83 Identities=14% Similarity=0.184 Sum_probs=54.9
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhh--HHHHHHHhcCCC-ce--eEEEECCCccccCCccccccccccCcCCCcE
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGY--ARPLVDRIDGEN-LF--SLRLYRPSTTSTEYREHVKDLSCLSKDLCRT 226 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~y--A~~vl~~Ldp~~-~f--~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~ 226 (276)
...-||+++-++.|-++|+++|.|+++..+ .+.-.+.|--.- ++ +.+++|.. |++- +-=
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn----------Kniv------kaD 130 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN----------KNIV------KAD 130 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC----------CCeE------Eee
Confidence 346799999999999999999999995443 444444442211 11 23333322 1111 123
Q ss_pred EEEEcCcccccCCCCCeeeeCccC
Q 023829 227 LIVDNNPFSFLLQPLNGIPCIPFS 250 (276)
Q Consensus 227 IiVDDsp~~~~~~p~NgI~V~~f~ 250 (276)
++|||.|.......+|-|.-..-+
T Consensus 131 ilIDDnp~nLE~F~G~kIlFdA~H 154 (180)
T COG4502 131 ILIDDNPLNLENFKGNKILFDAHH 154 (180)
T ss_pred EEecCCchhhhhccCceEEEeccc
Confidence 799999999988888988877765
No 136
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.44 E-value=0.075 Score=48.98 Aligned_cols=38 Identities=24% Similarity=0.317 Sum_probs=33.1
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDG 191 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp 191 (276)
.=||+.+||+.|.+. -.+++.|+++....+.+.++|..
T Consensus 25 ~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 25 AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 469999999999988 99999999999888877777755
No 137
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.38 E-value=0.081 Score=45.50 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=30.8
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRID 190 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ld 190 (276)
..|.+.+.|+.|.+. ..++|.|......+..+++.++
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 18 LSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 356778888999887 8999999999999999988743
No 138
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.34 E-value=0.075 Score=47.49 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=25.2
Q ss_pred CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L 189 (276)
=|++.++++.+.+. +.+++.|+++..-...+.++|
T Consensus 16 ~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 16 IPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 46889999999877 999999877654444444443
No 139
>PTZ00174 phosphomannomutase; Provisional
Probab=94.01 E-value=0.13 Score=46.18 Aligned_cols=15 Identities=33% Similarity=0.474 Sum_probs=13.5
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
.+.+++||||||+++
T Consensus 5 ~klia~DlDGTLL~~ 19 (247)
T PTZ00174 5 KTILLFDVDGTLTKP 19 (247)
T ss_pred CeEEEEECcCCCcCC
Confidence 578999999999985
No 140
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=93.95 E-value=0.016 Score=51.81 Aligned_cols=54 Identities=17% Similarity=0.329 Sum_probs=45.7
Q ss_pred eCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCcccc
Q 023829 154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTST 207 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~ 207 (276)
.-||+-+.++.+++. ||++|.|.+..-+.+.++++.+...+|+.+++...|...
T Consensus 85 ~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da 140 (256)
T KOG3120|consen 85 IVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA 140 (256)
T ss_pred CCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC
Confidence 679999999999987 899999999999999999998877777766666665443
No 141
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=93.18 E-value=0.31 Score=50.40 Aligned_cols=60 Identities=20% Similarity=0.168 Sum_probs=44.0
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-c
Q 023829 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-A 169 (276)
Q Consensus 91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-y 169 (276)
...++.+++||||||++.... +. +-..+-|+.+.+. .
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~~----------------------------------------i~--~~t~eAL~~L~ekGI 450 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLTY----------------------------------------SY--STALDALRLLKDKEL 450 (694)
T ss_pred CceeeEEEEECcCCCcCCCCc----------------------------------------cC--HHHHHHHHHHHHcCC
Confidence 346789999999999985210 00 1234567777776 8
Q ss_pred eEEEEccCchhhHHHHHHHhcCC
Q 023829 170 DLILFTAGLEGYARPLVDRIDGE 192 (276)
Q Consensus 170 elvI~Ts~~~~yA~~vl~~Ldp~ 192 (276)
.+++.|.-....+..+++.++..
T Consensus 451 ~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 451 PLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred eEEEEeCCCHHHHHHHHHHcCCC
Confidence 89999999888888898888754
No 142
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=92.87 E-value=0.18 Score=45.87 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=66.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc-eeEEEECCC-----------cc---ccCCc-----
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL-FSLRLYRPS-----------TT---STEYR----- 210 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~-f~~rl~r~~-----------c~---~~k~~----- 210 (276)
...=|.+.++++.+++. ..++..|+..+.+...-++.|-..|+ |+...++++ +. ....|
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 34678999999999976 99999999999999998888754432 222211110 00 00001
Q ss_pred ------cccccccccCcCCCcEEEEEcCccccc----CCCCCeeeeCccCC
Q 023829 211 ------EHVKDLSCLSKDLCRTLIVDNNPFSFL----LQPLNGIPCIPFSA 251 (276)
Q Consensus 211 ------~~~KdL~~L~rd~~~~IiVDDsp~~~~----~~p~NgI~V~~f~~ 251 (276)
....=|..+|..++.+|+|||+..... .....||.--.|++
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 223445667999999999999998753 23347776666655
No 143
>PLN02423 phosphomannomutase
Probab=92.69 E-value=0.25 Score=44.55 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=12.8
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
.|..+++||||||+++
T Consensus 6 ~~~i~~~D~DGTLl~~ 21 (245)
T PLN02423 6 PGVIALFDVDGTLTAP 21 (245)
T ss_pred cceEEEEeccCCCcCC
Confidence 4556669999999975
No 144
>PLN02887 hydrolase family protein
Probab=92.60 E-value=0.24 Score=50.37 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=38.1
Q ss_pred CceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhc-ceE
Q 023829 93 QKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEF-ADL 171 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~-yel 171 (276)
+.+.|++||||||+++.+ .+ -|...+-|+.+.+. ..+
T Consensus 307 ~iKLIa~DLDGTLLn~d~--~I----------------------------------------s~~t~eAI~kl~ekGi~~ 344 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS--QI----------------------------------------SETNAKALKEALSRGVKV 344 (580)
T ss_pred CccEEEEeCCCCCCCCCC--cc----------------------------------------CHHHHHHHHHHHHCCCeE
Confidence 567899999999997521 12 22334556666665 777
Q ss_pred EEEccCchhhHHHHHHHhcC
Q 023829 172 ILFTAGLEGYARPLVDRIDG 191 (276)
Q Consensus 172 vI~Ts~~~~yA~~vl~~Ldp 191 (276)
+|.|.-...-+..+++.++.
T Consensus 345 vIATGR~~~~i~~~l~~L~l 364 (580)
T PLN02887 345 VIATGKARPAVIDILKMVDL 364 (580)
T ss_pred EEEcCCCHHHHHHHHHHhCc
Confidence 77777776777777776654
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.56 E-value=0.33 Score=43.75 Aligned_cols=49 Identities=12% Similarity=0.248 Sum_probs=37.7
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEECC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRP 202 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~--f~~rl~r~ 202 (276)
.-|++.+|++.+.+. ++|++.|.-.+...+...+.|...|+ +...+-|.
T Consensus 121 aip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 121 ALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecC
Confidence 689999999999987 99999998888776666666655553 35566665
No 146
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=92.22 E-value=0.22 Score=44.59 Aligned_cols=37 Identities=14% Similarity=-0.056 Sum_probs=22.5
Q ss_pred CccHHHHHHHhhhcc-eEEEEccCchhhHHHHHHHhcC
Q 023829 155 RPGLREFLKQLSEFA-DLILFTAGLEGYARPLVDRIDG 191 (276)
Q Consensus 155 RPgl~eFL~~l~~~y-elvI~Ts~~~~yA~~vl~~Ldp 191 (276)
.|.+.+.++.+.+.. .+++.|.-+..-++.+++.+..
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 466666666666653 5555566565666666665543
No 147
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=91.94 E-value=0.29 Score=44.55 Aligned_cols=40 Identities=15% Similarity=0.256 Sum_probs=29.1
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhh-HHHHHHHhcCC
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGY-ARPLVDRIDGE 192 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~y-A~~vl~~Ldp~ 192 (276)
+.=||+-|||+++-++ -.|.--|+-..+. ...-++.|-..
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~ 163 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE 163 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc
Confidence 3679999999999999 5555556666666 66666666543
No 148
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=91.71 E-value=0.33 Score=49.07 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=60.1
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD 231 (276)
..|||+.+++++|++. ++++|.|+..+.+++.+++.++.+ +| .+ +........++.+ ..+.+++++|-|
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~-~~p~~K~~~v~~l---~~~~~~v~~VGD 474 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AE-VLPDDKAALIKEL---QEKGRVVAMVGD 474 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----cc-CChHHHHHHHHHH---HHcCCEEEEEeC
Confidence 3899999999999987 999999999999999999998774 22 21 2111111333443 335688999999
Q ss_pred CcccccCCCCCeeee
Q 023829 232 NPFSFLLQPLNGIPC 246 (276)
Q Consensus 232 sp~~~~~~p~NgI~V 246 (276)
...-...-..+++.|
T Consensus 475 g~nD~~al~~A~vgi 489 (562)
T TIGR01511 475 GINDAPALAQADVGI 489 (562)
T ss_pred CCccHHHHhhCCEEE
Confidence 988776544555544
No 149
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=91.40 E-value=0.38 Score=43.90 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=20.8
Q ss_pred CccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHh
Q 023829 155 RPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 155 RPgl~eFL~~l~~--~yelvI~Ts~~~~yA~~vl~~L 189 (276)
-|.+.+-|+.|.+ ...++|.|.-...-++.+++.+
T Consensus 38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 3556666666665 2566666666666666555443
No 150
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=90.69 E-value=0.27 Score=44.08 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=32.6
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
..=||+.+|++.+.+. ++|++-|.-....-+.-++.|...|
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G 156 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAG 156 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcC
Confidence 3679999999999998 8898888877776666666665544
No 151
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=89.89 E-value=0.62 Score=39.60 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=59.1
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEEEECCCccccCCccccccccccCcCCCcEEEE
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIV 229 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~--~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiV 229 (276)
..||++.++|+.|++. +.++|.|......|..+++.++... .|.... +... +..+.+-++.++.+.++|+.|
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~----~kP~-~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVI----GKPE-PKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHE----TTTH-HHHHHHHHHHHTCTGGGEEEE
T ss_pred cchhhhhhhhhhhhccCcceeeeecccccccccccccccccccccccccc----cccc-chhHHHHHHHHhcCCCEEEEE
Confidence 4899999999999998 9999999999999999999998844 222211 1111 123466777788788899999
Q ss_pred EcCcc
Q 023829 230 DNNPF 234 (276)
Q Consensus 230 DDsp~ 234 (276)
-|...
T Consensus 202 GDg~n 206 (215)
T PF00702_consen 202 GDGVN 206 (215)
T ss_dssp ESSGG
T ss_pred ccCHH
Confidence 99864
No 152
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=89.78 E-value=1.3 Score=41.03 Aligned_cols=86 Identities=8% Similarity=0.074 Sum_probs=52.4
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc--eeEEEECCCcccc-CCccccccc--cc-cCcCCCcE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL--FSLRLYRPSTTST-EYREHVKDL--SC-LSKDLCRT 226 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~--f~~rl~r~~c~~~-k~~~~~KdL--~~-L~rd~~~~ 226 (276)
.=|++.+|++.+.+. ++|++.|.-.+..-+.-++.|...|+ ....+-|+.-... +...-.|-- .. +...-+=+
T Consensus 146 Alp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv 225 (275)
T TIGR01680 146 ALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIV 225 (275)
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEE
Confidence 568999999999987 99999998888777777777776665 3556666432111 111111211 11 11222234
Q ss_pred EEEEcCcccccCC
Q 023829 227 LIVDNNPFSFLLQ 239 (276)
Q Consensus 227 IiVDDsp~~~~~~ 239 (276)
..|+|...-+...
T Consensus 226 ~~iGDq~sDl~G~ 238 (275)
T TIGR01680 226 GIIGDQWNDLKGE 238 (275)
T ss_pred EEECCCHHhccCC
Confidence 6788887766544
No 153
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=89.68 E-value=0.5 Score=45.06 Aligned_cols=54 Identities=22% Similarity=0.312 Sum_probs=45.2
Q ss_pred eEEEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-c-------CCCceeEEEECC
Q 023829 149 HVTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-D-------GENLFSLRLYRP 202 (276)
Q Consensus 149 ~~~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L-d-------p~~~f~~rl~r~ 202 (276)
.-|+.+-||+.++|+.|.+. ..+.|.|++...|++.+++.+ + -..+|..++...
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a 242 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDA 242 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCC
Confidence 34577899999999999987 999999999999999999997 5 345777666533
No 154
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=89.53 E-value=0.2 Score=44.65 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=13.9
Q ss_pred ceEEEEeCCCcccccc
Q 023829 94 KLTVVLDLDETLVCAY 109 (276)
Q Consensus 94 k~tLVLDLDgTLv~s~ 109 (276)
-+.|+|||||||+++.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 4689999999999963
No 155
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=88.76 E-value=0.31 Score=42.66 Aligned_cols=95 Identities=17% Similarity=0.165 Sum_probs=71.0
Q ss_pred EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHH----HHhcCCCceeEEEECCCccccCCccccccccccCcCCCc
Q 023829 151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLV----DRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCR 225 (276)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl----~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~ 225 (276)
.-++-|.+-++++.-.+. ..+.|||||+-. |+.++ +..|..++|+..+....-...+...|.|.+..+|-++..
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~e 179 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAE 179 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchh
Confidence 355789999999988876 999999999854 33333 234566778877665443333334799999999999999
Q ss_pred EEEEEcCcccccCCCCCeeee
Q 023829 226 TLIVDNNPFSFLLQPLNGIPC 246 (276)
Q Consensus 226 ~IiVDDsp~~~~~~p~NgI~V 246 (276)
++++-|++.......+.|+..
T Consensus 180 ilFLSDn~~EL~AA~~vGl~t 200 (229)
T COG4229 180 ILFLSDNPEELKAAAGVGLAT 200 (229)
T ss_pred eEEecCCHHHHHHHHhcchhe
Confidence 999999999877666666643
No 156
>PLN02151 trehalose-phosphatase
Probab=87.62 E-value=0.88 Score=43.60 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=20.8
Q ss_pred eCccHHHHHHHhhhcceEEEEccCchhhHHHHHH
Q 023829 154 ERPGLREFLKQLSEFADLILFTAGLEGYARPLVD 187 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~ 187 (276)
.-|++.+-|+.|++.+.++|.|--...-++.++.
T Consensus 121 ~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 121 MSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 4466666666666666666666655555555543
No 157
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=87.27 E-value=0.3 Score=41.75 Aligned_cols=15 Identities=27% Similarity=0.222 Sum_probs=13.1
Q ss_pred eEEEEeCCCcccccc
Q 023829 95 LTVVLDLDETLVCAY 109 (276)
Q Consensus 95 ~tLVLDLDgTLv~s~ 109 (276)
+.|+||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 479999999999864
No 158
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=87.23 E-value=0.28 Score=40.90 Aligned_cols=13 Identities=38% Similarity=0.373 Sum_probs=11.7
Q ss_pred EEEeCCCcccccc
Q 023829 97 VVLDLDETLVCAY 109 (276)
Q Consensus 97 LVLDLDgTLv~s~ 109 (276)
|+||+||||+++.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999964
No 159
>PLN03017 trehalose-phosphatase
Probab=86.96 E-value=1 Score=43.31 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=19.3
Q ss_pred CccHHHHHHHhhhcceEEEEccCchhhHHHHH
Q 023829 155 RPGLREFLKQLSEFADLILFTAGLEGYARPLV 186 (276)
Q Consensus 155 RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl 186 (276)
-|.+.+-|+.|.+.+.++|.|--...-++.++
T Consensus 135 ~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 135 SSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhh
Confidence 35555666666655666666666655555553
No 160
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=86.77 E-value=0.54 Score=47.36 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=62.4
Q ss_pred eeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829 153 FERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD 230 (276)
..|||+.+.|++|.+. ++++|.|+..+.+++.+++.++...+|... ....| ...++. +....+++++|-
T Consensus 384 ~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~-----~p~~K-~~~v~~---l~~~~~~v~~vG 454 (556)
T TIGR01525 384 QLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL-----LPEDK-LAIVKE---LQEEGGVVAMVG 454 (556)
T ss_pred cchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC-----CHHHH-HHHHHH---HHHcCCEEEEEE
Confidence 3999999999999865 899999999999999999999987766532 11111 123333 334556999999
Q ss_pred cCcccccCCCCCeeee
Q 023829 231 NNPFSFLLQPLNGIPC 246 (276)
Q Consensus 231 Dsp~~~~~~p~NgI~V 246 (276)
|...-...-..+|+-|
T Consensus 455 Dg~nD~~al~~A~vgi 470 (556)
T TIGR01525 455 DGINDAPALAAADVGI 470 (556)
T ss_pred CChhHHHHHhhCCEeE
Confidence 9998766555555544
No 161
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=86.77 E-value=0.39 Score=48.21 Aligned_cols=84 Identities=11% Similarity=0.141 Sum_probs=63.0
Q ss_pred eeCccHHHHHHHhhhc-c-eEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEE
Q 023829 153 FERPGLREFLKQLSEF-A-DLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVD 230 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-y-elvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVD 230 (276)
..|||+.+.+++|++. + +++|.|+..+.+++.+++.++..++|.... .. .-.+-++.+....+++++|-
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-----p~----~K~~~i~~l~~~~~~v~~vG 432 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-----PE----DKLEIVKELREKYGPVAMVG 432 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-----cH----HHHHHHHHHHhcCCEEEEEe
Confidence 3899999999999987 8 999999999999999999998877664321 11 11233444455668999999
Q ss_pred cCcccccCCCCCeee
Q 023829 231 NNPFSFLLQPLNGIP 245 (276)
Q Consensus 231 Dsp~~~~~~p~NgI~ 245 (276)
|...-...-..+++-
T Consensus 433 Dg~nD~~al~~A~vg 447 (536)
T TIGR01512 433 DGINDAPALAAADVG 447 (536)
T ss_pred CCHHHHHHHHhCCEE
Confidence 998876554455543
No 162
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=85.98 E-value=1 Score=40.23 Aligned_cols=15 Identities=33% Similarity=0.366 Sum_probs=13.5
Q ss_pred CceEEEEeCCCcccc
Q 023829 93 QKLTVVLDLDETLVC 107 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~ 107 (276)
++..|+||+||||+.
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 578899999999996
No 163
>PLN02580 trehalose-phosphatase
Probab=85.80 E-value=1.5 Score=42.52 Aligned_cols=61 Identities=18% Similarity=0.240 Sum_probs=46.3
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023829 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD 170 (276)
Q Consensus 91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye 170 (276)
..++..|+||.||||.--.. -|. .+..=|++.+-|+.|++.+.
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~---~Pd----------------------------------~A~~s~~~~~aL~~La~~~~ 158 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVD---DPD----------------------------------RALMSDAMRSAVKNVAKYFP 158 (384)
T ss_pred hcCCeEEEEecCCccCCCCC---Ccc----------------------------------cccCCHHHHHHHHHHhhCCC
Confidence 44678899999999985210 010 03356899999999999999
Q ss_pred EEEEccCchhhHHHHHHH
Q 023829 171 LILFTAGLEGYARPLVDR 188 (276)
Q Consensus 171 lvI~Ts~~~~yA~~vl~~ 188 (276)
++|.|--...-++..+..
T Consensus 159 VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 159 TAIISGRSRDKVYELVGL 176 (384)
T ss_pred EEEEeCCCHHHHHHHhCC
Confidence 999999888888877764
No 164
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=83.55 E-value=3.6 Score=36.49 Aligned_cols=88 Identities=15% Similarity=0.280 Sum_probs=59.5
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEE-EECCCccccC---------Cc---ccccc
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLR-LYRPSTTSTE---------YR---EHVKD 215 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~--~f~~r-l~r~~c~~~k---------~~---~~~Kd 215 (276)
..+-||++|+...|.+. .++++-|-|-+..+++|.+.|+... .+..+ ++..+-.+.. .+ .-++-
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 34789999999999987 9999999999999999999998753 44333 2222111111 01 12333
Q ss_pred ccccCcCCCcEEEEEcCcccccCCC
Q 023829 216 LSCLSKDLCRTLIVDNNPFSFLLQP 240 (276)
Q Consensus 216 L~~L~rd~~~~IiVDDsp~~~~~~p 240 (276)
|++ +.+-+.++.|=|-..-...-|
T Consensus 167 lrk-~~~~~~~~mvGDGatDlea~~ 190 (227)
T KOG1615|consen 167 LRK-NYNYKTIVMVGDGATDLEAMP 190 (227)
T ss_pred HHh-CCChheeEEecCCccccccCC
Confidence 334 778888888888766554433
No 165
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=83.45 E-value=2.2 Score=39.31 Aligned_cols=60 Identities=18% Similarity=0.180 Sum_probs=45.2
Q ss_pred cCCceEEEEeCCCcccccccCCCCchhhhhhhcccCcccceeeccccCccCCCCcccceEEEeeCccHHHHHHHhhhcce
Q 023829 91 RLQKLTVVLDLDETLVCAYETSSLPVTLRNQATGAGLKWFEMECLSSDKECEGKPKINHVTVFERPGLREFLKQLSEFAD 170 (276)
Q Consensus 91 ~~~k~tLVLDLDgTLv~s~~~s~lp~~~~~~~~~~~~~~f~l~~~~~~~~~~g~~~~~~~~v~~RPgl~eFL~~l~~~ye 170 (276)
..+|.+++||.||||...... | .-...=+++.+.|..|+..+.
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~---p----------------------------------~~a~~~~~l~~lL~~Las~~~ 57 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPH---P----------------------------------EAAVPDDRLLSLLQDLASDPR 57 (266)
T ss_pred cccceEEEEeccccccccccC---c----------------------------------cccCCCHHHHHHHHHHHhcCC
Confidence 447899999999999974210 0 002356788999999999988
Q ss_pred --EEEEccCchhhHHHHHH
Q 023829 171 --LILFTAGLEGYARPLVD 187 (276)
Q Consensus 171 --lvI~Ts~~~~yA~~vl~ 187 (276)
++|.|--+..-.+..+.
T Consensus 58 ~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 58 NVVAIISGRSLAELERLFG 76 (266)
T ss_pred CeEEEEeCCCHHHHHHhcC
Confidence 88888888888877777
No 166
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=82.26 E-value=2.1 Score=44.63 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=23.1
Q ss_pred CccHHHHHHHhhh--cceEEEEccCchhhHHHHHHHh
Q 023829 155 RPGLREFLKQLSE--FADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 155 RPgl~eFL~~l~~--~yelvI~Ts~~~~yA~~vl~~L 189 (276)
-|.+.+.|+.|.+ ...++|.|.-+....+..+..+
T Consensus 516 ~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~ 552 (726)
T PRK14501 516 DKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL 552 (726)
T ss_pred CHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 4566677777776 4677777777766666665543
No 167
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=81.46 E-value=7.8 Score=32.06 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=53.4
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCc-hhhHHHHHHHhcCCCc---------eeEEEECCCccccCCccccccccc-c
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGL-EGYARPLVDRIDGENL---------FSLRLYRPSTTSTEYREHVKDLSC-L 219 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~-~~yA~~vl~~Ldp~~~---------f~~rl~r~~c~~~k~~~~~KdL~~-L 219 (276)
...=|....-|..|++. .++++.+.+. +++|.+.++.+..... |......+... -.+.|++-. -
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsk----lghfke~~n~s 118 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSK----LGHFKEFTNNS 118 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCccc----chhHHHHhhcc
Confidence 33568888999999988 9999998775 5899999999875533 33333333211 123466544 3
Q ss_pred CcCCCcEEEEEcCccc
Q 023829 220 SKDLCRTLIVDNNPFS 235 (276)
Q Consensus 220 ~rd~~~~IiVDDsp~~ 235 (276)
+...++..+.||...+
T Consensus 119 ~~~~k~~~~fdDesrn 134 (144)
T KOG4549|consen 119 NSIEKNKQVFDDESRN 134 (144)
T ss_pred CcchhceeeecccccC
Confidence 5667788888886543
No 168
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=80.46 E-value=4.7 Score=36.51 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=24.8
Q ss_pred HHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 160 EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 160 eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
.-+..+.+. |+|+.-||-+..-....=+.|+.++
T Consensus 30 pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 30 PVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred hHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 445667766 9999999887766666667777664
No 169
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=79.86 E-value=3.9 Score=34.75 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=28.1
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L 189 (276)
+.+||+-++...+.++ |.++=-|+-.-..|...-+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 4799999999999999 877666776656665555544
No 170
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=78.52 E-value=0.2 Score=44.65 Aligned_cols=90 Identities=17% Similarity=0.018 Sum_probs=60.6
Q ss_pred CccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEE--EECCCccccCCc--cccccccccCc-CCCcEEE
Q 023829 155 RPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLR--LYRPSTTSTEYR--EHVKDLSCLSK-DLCRTLI 228 (276)
Q Consensus 155 RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~r--l~r~~c~~~k~~--~~~KdL~~L~r-d~~~~Ii 228 (276)
-|++.+.|+.+.+. ..+ |.|+....|+...+..++...+|... ...+.....|+. .+.+.+++++. +.+++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 48999999998765 666 67999999998777766655454422 344433334443 45666777774 5679999
Q ss_pred EEcCc-ccccCCCCCeee
Q 023829 229 VDNNP-FSFLLQPLNGIP 245 (276)
Q Consensus 229 VDDsp-~~~~~~p~NgI~ 245 (276)
|-|+. .-......+|+.
T Consensus 219 vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 219 VGDSFYTDILGANRLGID 236 (242)
T ss_pred ECCCcHHHHHHHHHCCCe
Confidence 99995 555555556654
No 171
>PLN02382 probable sucrose-phosphatase
Probab=78.41 E-value=4.4 Score=39.50 Aligned_cols=17 Identities=41% Similarity=0.524 Sum_probs=14.5
Q ss_pred CCceEEEEeCCCccccc
Q 023829 92 LQKLTVVLDLDETLVCA 108 (276)
Q Consensus 92 ~~k~tLVLDLDgTLv~s 108 (276)
..++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 35789999999999975
No 172
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=78.18 E-value=2.5 Score=37.30 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=11.1
Q ss_pred EEEEeCCCccccc
Q 023829 96 TVVLDLDETLVCA 108 (276)
Q Consensus 96 tLVLDLDgTLv~s 108 (276)
+++.||||||+++
T Consensus 1 li~~DlDgTLl~~ 13 (236)
T TIGR02471 1 LIITDLDNTLLGD 13 (236)
T ss_pred CeEEeccccccCC
Confidence 3788999999974
No 173
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=76.46 E-value=4.1 Score=36.68 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=12.2
Q ss_pred ceEEEEeCCCccc
Q 023829 94 KLTVVLDLDETLV 106 (276)
Q Consensus 94 k~tLVLDLDgTLv 106 (276)
+++|+-||||||+
T Consensus 2 ~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 2 PRLLASDLDGTLI 14 (247)
T ss_dssp SEEEEEETBTTTB
T ss_pred CEEEEEECCCCCc
Confidence 6889999999999
No 174
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=75.06 E-value=5.7 Score=33.08 Aligned_cols=45 Identities=16% Similarity=0.455 Sum_probs=36.5
Q ss_pred CccHH----HHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC--ceeEEE
Q 023829 155 RPGLR----EFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN--LFSLRL 199 (276)
Q Consensus 155 RPgl~----eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~--~f~~rl 199 (276)
+|++. +|++.+.+. ++++|-|++...+++++++.++... .+...+
T Consensus 87 ~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 87 FPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp CTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred CcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 45555 999999755 9999999999999999999887664 455555
No 175
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=74.35 E-value=2.8 Score=42.04 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=26.2
Q ss_pred hcceEEEEccCchhhHHHHHHH-hcC------------CCceeEEEECCCc
Q 023829 167 EFADLILFTAGLEGYARPLVDR-IDG------------ENLFSLRLYRPST 204 (276)
Q Consensus 167 ~~yelvI~Ts~~~~yA~~vl~~-Ldp------------~~~f~~rl~r~~c 204 (276)
++-+.+|.|++.+.|++++++. ++- +|++..++...+|
T Consensus 121 ~~g~~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~ 171 (497)
T PLN02177 121 SFGKRYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGV 171 (497)
T ss_pred hCCCEEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCC
Confidence 3334599999999999999976 432 3456666655543
No 176
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=73.82 E-value=3.6 Score=37.48 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=50.7
Q ss_pred EEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCC--C--ceeEEEEC-CCc---cccCC--cccccccccc
Q 023829 151 TVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGE--N--LFSLRLYR-PST---TSTEY--REHVKDLSCL 219 (276)
Q Consensus 151 ~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~--~--~f~~rl~r-~~c---~~~k~--~~~~KdL~~L 219 (276)
-+.+|.|..+|++.|.++ ..+.|||||.-.-.+.+++.-... + .++..+.- ++- +...+ ..+.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 367999999999999988 999999999999999999986321 1 34443322 221 11111 0234443333
Q ss_pred --------CcCCCcEEEEEcCccccc
Q 023829 220 --------SKDLCRTLIVDNNPFSFL 237 (276)
Q Consensus 220 --------~rd~~~~IiVDDsp~~~~ 237 (276)
-..-.|+|++=|+..-..
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~ 193 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLH 193 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGG
T ss_pred cCchHHHHhccCCcEEEecCccCChH
Confidence 135678999999988653
No 177
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=73.17 E-value=2.1 Score=36.92 Aligned_cols=16 Identities=31% Similarity=0.370 Sum_probs=14.0
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
..+.++||+||||++.
T Consensus 3 ~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 3 MIKAILFDLDGTLLDF 18 (229)
T ss_pred ceeEEEEecCCccccc
Confidence 4688999999999985
No 178
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=72.36 E-value=6.4 Score=42.09 Aligned_cols=16 Identities=31% Similarity=0.434 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
+++.|+||+||||+..
T Consensus 595 ~~rlI~LDyDGTLlp~ 610 (854)
T PLN02205 595 TTRAILLDYDGTLMPQ 610 (854)
T ss_pred cCeEEEEecCCcccCC
Confidence 5788999999999953
No 179
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=70.00 E-value=0.33 Score=44.00 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=26.8
Q ss_pred cccccccccCcCCCcEEEEEcCc-ccccCCCCCeeeeCc
Q 023829 211 EHVKDLSCLSKDLCRTLIVDNNP-FSFLLQPLNGIPCIP 248 (276)
Q Consensus 211 ~~~KdL~~L~rd~~~~IiVDDsp-~~~~~~p~NgI~V~~ 248 (276)
.+.+-+++++.+++++++|.|+. .-......+|+..--
T Consensus 184 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~ 222 (257)
T TIGR01458 184 FFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQ 222 (257)
T ss_pred HHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEE
Confidence 45566677888999999999996 455555556655433
No 180
>PRK10671 copA copper exporting ATPase; Provisional
Probab=67.86 E-value=3.8 Score=43.43 Aligned_cols=84 Identities=10% Similarity=0.036 Sum_probs=62.0
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEcC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDNN 232 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDDs 232 (276)
.|||+.+.|+.|.+. +++++.|...+..|+.+++.++...+|... .. ..-.+-++.++...+++++|-|.
T Consensus 651 ~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~------~p---~~K~~~i~~l~~~~~~v~~vGDg 721 (834)
T PRK10671 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV------LP---DGKAEAIKRLQSQGRQVAMVGDG 721 (834)
T ss_pred chhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC------CH---HHHHHHHHHHhhcCCEEEEEeCC
Confidence 799999999999877 999999999999999999998876554321 11 11122334445566789999999
Q ss_pred cccccCCCCCeeee
Q 023829 233 PFSFLLQPLNGIPC 246 (276)
Q Consensus 233 p~~~~~~p~NgI~V 246 (276)
..-...-..+|+-|
T Consensus 722 ~nD~~al~~Agvgi 735 (834)
T PRK10671 722 INDAPALAQADVGI 735 (834)
T ss_pred HHHHHHHHhCCeeE
Confidence 88766555555544
No 181
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=66.89 E-value=3.1 Score=34.77 Aligned_cols=13 Identities=38% Similarity=0.531 Sum_probs=11.1
Q ss_pred EEEeCCCcccccc
Q 023829 97 VVLDLDETLVCAY 109 (276)
Q Consensus 97 LVLDLDgTLv~s~ 109 (276)
++||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999853
No 182
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=65.09 E-value=12 Score=39.68 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=21.4
Q ss_pred eCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHH
Q 023829 154 ERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVD 187 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~ 187 (276)
.-|++.+-|+.|++. -.|+|.|.-..+-.+..+.
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 346677777777654 5666667666666655554
No 183
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=64.02 E-value=10 Score=33.43 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=22.8
Q ss_pred eeCccHHHHHHHhhhcce--EEEEccCchhhHHHH
Q 023829 153 FERPGLREFLKQLSEFAD--LILFTAGLEGYARPL 185 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~ye--lvI~Ts~~~~yA~~v 185 (276)
..-|++.+.|+.|+.... ++|.|.-.....+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 467899999999998866 888888777774444
No 184
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=62.16 E-value=6.4 Score=40.98 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=37.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN 193 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~ 193 (276)
.||++.+.+++|++. .++++-|--.+..|+.+.+.++...
T Consensus 446 ~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~ 486 (679)
T PRK01122 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD 486 (679)
T ss_pred CchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE
Confidence 799999999999987 9999999999999999999998754
No 185
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=61.52 E-value=4 Score=34.67 Aligned_cols=12 Identities=33% Similarity=0.540 Sum_probs=10.7
Q ss_pred EEEeCCCccccc
Q 023829 97 VVLDLDETLVCA 108 (276)
Q Consensus 97 LVLDLDgTLv~s 108 (276)
.+||+||||+..
T Consensus 2 a~FD~DgTL~~~ 13 (202)
T TIGR01490 2 AFFDFDGTLTAK 13 (202)
T ss_pred eEEccCCCCCCC
Confidence 689999999974
No 186
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=58.72 E-value=7.5 Score=40.43 Aligned_cols=41 Identities=20% Similarity=0.274 Sum_probs=38.2
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~ 194 (276)
.||++.+.+++|++. .++++-|--.+..|..+.+.++...+
T Consensus 442 ~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v 483 (673)
T PRK14010 442 IKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRF 483 (673)
T ss_pred CcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceE
Confidence 899999999999987 99999999999999999999987653
No 187
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=58.31 E-value=7.4 Score=40.52 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=38.2
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENL 194 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~ 194 (276)
.||++.+.+++|.+. .++++.|-..+..|+.+.+.++-..+
T Consensus 447 ~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v 488 (675)
T TIGR01497 447 VKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDF 488 (675)
T ss_pred chhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEE
Confidence 999999999999988 99999999999999999999987543
No 188
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=55.33 E-value=24 Score=38.21 Aligned_cols=37 Identities=14% Similarity=0.175 Sum_probs=30.6
Q ss_pred eeCccHHHHHHHhhhc--ceEEEEccCchhhHHHHHHHh
Q 023829 153 FERPGLREFLKQLSEF--ADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~--yelvI~Ts~~~~yA~~vl~~L 189 (276)
..-|++.+.|+.|++. ..|+|.|.-..+-.+..+..+
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 3457899999999976 789999998888888888665
No 189
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=54.72 E-value=22 Score=26.77 Aligned_cols=15 Identities=40% Similarity=0.452 Sum_probs=13.4
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
..+|||+=|||.|++
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 588999999999975
No 190
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=54.63 E-value=19 Score=27.27 Aligned_cols=16 Identities=44% Similarity=0.405 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
...+|||+=|||.|++
T Consensus 38 ~~~~lvLeeDGT~Vd~ 53 (81)
T cd06537 38 GVLTLVLEEDGTAVDS 53 (81)
T ss_pred CceEEEEecCCCEEcc
Confidence 3589999999999975
No 191
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=53.33 E-value=8.3 Score=32.52 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=12.0
Q ss_pred eEEEEeCCCccccc
Q 023829 95 LTVVLDLDETLVCA 108 (276)
Q Consensus 95 ~tLVLDLDgTLv~s 108 (276)
.+|+||.||||...
T Consensus 2 ~~i~fDktGTLt~~ 15 (215)
T PF00702_consen 2 DAICFDKTGTLTQG 15 (215)
T ss_dssp SEEEEECCTTTBES
T ss_pred eEEEEecCCCcccC
Confidence 47999999999864
No 192
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=48.77 E-value=29 Score=26.07 Aligned_cols=16 Identities=38% Similarity=0.337 Sum_probs=13.9
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
...+|||+-|||.|+.
T Consensus 39 ~~~~lvL~eDGTeVdd 54 (78)
T cd01615 39 APVTLVLEEDGTEVDD 54 (78)
T ss_pred CCeEEEEeCCCcEEcc
Confidence 4688999999999974
No 193
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=48.30 E-value=23 Score=34.55 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=14.0
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
..+.+-||+|||||+.
T Consensus 74 ~~K~i~FD~dgtlI~t 89 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDT 89 (422)
T ss_pred CcceEEEecCCceeec
Confidence 5678899999999985
No 194
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=48.12 E-value=30 Score=25.78 Aligned_cols=15 Identities=40% Similarity=0.488 Sum_probs=13.3
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
..+|+|+=|||.|++
T Consensus 38 ~~~l~L~eDGT~Vdd 52 (74)
T smart00266 38 PVTLVLEEDGTIVDD 52 (74)
T ss_pred CcEEEEecCCcEEcc
Confidence 588999999999974
No 195
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=47.31 E-value=31 Score=26.07 Aligned_cols=16 Identities=38% Similarity=0.416 Sum_probs=13.7
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
...+|||+-|||.|++
T Consensus 41 ~~~~lvL~eDGT~Vdd 56 (80)
T cd06536 41 APITLVLAEDGTIVED 56 (80)
T ss_pred CceEEEEecCCcEEcc
Confidence 3588999999999974
No 196
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=46.62 E-value=29 Score=26.20 Aligned_cols=15 Identities=40% Similarity=0.251 Sum_probs=13.2
Q ss_pred ceEEEEeCCCccccc
Q 023829 94 KLTVVLDLDETLVCA 108 (276)
Q Consensus 94 k~tLVLDLDgTLv~s 108 (276)
..+|||+-|||.|++
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 478999999999974
No 197
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=45.73 E-value=31 Score=31.07 Aligned_cols=86 Identities=20% Similarity=0.283 Sum_probs=50.6
Q ss_pred eCccHHHHHHHhh-hcceEEEEccCchhhHHHHHHHhcCCCc-------eeEE-EECCCccccCCc-------ccccccc
Q 023829 154 ERPGLREFLKQLS-EFADLILFTAGLEGYARPLVDRIDGENL-------FSLR-LYRPSTTSTEYR-------EHVKDLS 217 (276)
Q Consensus 154 ~RPgl~eFL~~l~-~~yelvI~Ts~~~~yA~~vl~~Ldp~~~-------f~~r-l~r~~c~~~k~~-------~~~KdL~ 217 (276)
.=||..|=|+.|. ++-.+-..|+++++--+.+.++|-.-++ |.-. -.|+-|...+-+ .-..|..
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~ 103 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFD 103 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCC
Confidence 4688999999999 6688888899988887778777643321 1100 001111111111 1123444
Q ss_pred ccCcCCCcEEEEEcCcccccCC
Q 023829 218 CLSKDLCRTLIVDNNPFSFLLQ 239 (276)
Q Consensus 218 ~L~rd~~~~IiVDDsp~~~~~~ 239 (276)
-+..+--|+|+|-+.|.+|..+
T Consensus 104 gidTs~pn~VViglape~F~y~ 125 (262)
T KOG3040|consen 104 GIDTSDPNCVVIGLAPEGFSYQ 125 (262)
T ss_pred CccCCCCCeEEEecCcccccHH
Confidence 4555566788888888776544
No 198
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=45.16 E-value=24 Score=34.37 Aligned_cols=13 Identities=38% Similarity=0.631 Sum_probs=10.9
Q ss_pred eEEEEeCCCcccc
Q 023829 95 LTVVLDLDETLVC 107 (276)
Q Consensus 95 ~tLVLDLDgTLv~ 107 (276)
...|.|||+|||-
T Consensus 198 RVFiWDlDEtiIi 210 (468)
T KOG3107|consen 198 RVFIWDLDETIII 210 (468)
T ss_pred eEEEeeccchHHH
Confidence 4579999999993
No 199
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=41.03 E-value=1e+02 Score=25.70 Aligned_cols=12 Identities=42% Similarity=0.526 Sum_probs=10.3
Q ss_pred EEeCCCcccccc
Q 023829 98 VLDLDETLVCAY 109 (276)
Q Consensus 98 VLDLDgTLv~s~ 109 (276)
||||||.|++-.
T Consensus 47 ildL~G~~l~l~ 58 (138)
T PF04312_consen 47 ILDLDGELLDLK 58 (138)
T ss_pred EEecCCcEEEEE
Confidence 799999999853
No 200
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=40.57 E-value=2.6 Score=38.42 Aligned_cols=93 Identities=18% Similarity=0.013 Sum_probs=55.8
Q ss_pred eCccHHHHHHHhhhcceEEEEccCchhhHHH-HHHHhcCCCceeEEE---ECCCccccCCc--cccccccccCcCCCcEE
Q 023829 154 ERPGLREFLKQLSEFADLILFTAGLEGYARP-LVDRIDGENLFSLRL---YRPSTTSTEYR--EHVKDLSCLSKDLCRTL 227 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~-vl~~Ldp~~~f~~rl---~r~~c~~~k~~--~~~KdL~~L~rd~~~~I 227 (276)
--|++.+.++.|.+.--+.|-|+....+... .....+...+|..+. .++.....|+. .+.+.++.+|.++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~l 223 (279)
T TIGR01452 144 SYAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTL 223 (279)
T ss_pred CHHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEE
Confidence 3678999999998643378888887766421 111222222332221 12322233443 45667778899999999
Q ss_pred EEEcCc-ccccCCCCCeeee
Q 023829 228 IVDNNP-FSFLLQPLNGIPC 246 (276)
Q Consensus 228 iVDDsp-~~~~~~p~NgI~V 246 (276)
+|-|++ .-......+|+..
T Consensus 224 mIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 224 MVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred EECCChHHHHHHHHHcCCcE
Confidence 999996 4455555566644
No 201
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=40.48 E-value=19 Score=36.09 Aligned_cols=36 Identities=3% Similarity=-0.008 Sum_probs=27.2
Q ss_pred ceEEEEccCchhhHHHHHHH-hcCC------------CceeEEEECCCc
Q 023829 169 ADLILFTAGLEGYARPLVDR-IDGE------------NLFSLRLYRPST 204 (276)
Q Consensus 169 yelvI~Ts~~~~yA~~vl~~-Ldp~------------~~f~~rl~r~~c 204 (276)
-+++|.|++.+.++++-++. +.-+ |++...+-..+|
T Consensus 109 g~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~ 157 (498)
T PLN02499 109 DKRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDV 157 (498)
T ss_pred CeEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCcc
Confidence 48999999999999999998 4322 455555655566
No 202
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=39.78 E-value=16 Score=27.40 Aligned_cols=16 Identities=31% Similarity=0.320 Sum_probs=13.7
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
....|||+-|||.|+.
T Consensus 39 ~~~~lvL~eDGT~Vdd 54 (78)
T PF02017_consen 39 EPVRLVLEEDGTEVDD 54 (78)
T ss_dssp STCEEEETTTTCBESS
T ss_pred cCcEEEEeCCCcEEcc
Confidence 4678999999999984
No 203
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=34.90 E-value=38 Score=32.21 Aligned_cols=39 Identities=21% Similarity=0.195 Sum_probs=30.6
Q ss_pred EEeeCc-cHHHHHHHhhh------cceEEEEccCchhhHHHHHHHh
Q 023829 151 TVFERP-GLREFLKQLSE------FADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 151 ~v~~RP-gl~eFL~~l~~------~yelvI~Ts~~~~yA~~vl~~L 189 (276)
.++.|| ++.+.|+.|.+ .++|+|+-.|...-+..+++..
T Consensus 7 ~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 7 IACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 466899 69999999985 3889999999877666666554
No 204
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=33.98 E-value=20 Score=31.09 Aligned_cols=12 Identities=25% Similarity=0.515 Sum_probs=10.6
Q ss_pred EEEeCCCccccc
Q 023829 97 VVLDLDETLVCA 108 (276)
Q Consensus 97 LVLDLDgTLv~s 108 (276)
+++|+||||...
T Consensus 2 ~~fDFDgTit~~ 13 (214)
T TIGR03333 2 IICDFDGTITNN 13 (214)
T ss_pred EEeccCCCCCcc
Confidence 689999999964
No 205
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=29.48 E-value=1.3e+02 Score=25.28 Aligned_cols=45 Identities=27% Similarity=0.417 Sum_probs=25.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCC-ceeEEEE
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGEN-LFSLRLY 200 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~-~f~~rl~ 200 (276)
.|-.+.+||+.+... -.|++|-++.+..+ ++..++..+ .+.+++-
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~t--lln~~g~~~~~I~~vvD 99 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNT--LLNYFGLDNDLIDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHH--HHHHHT--TTTS--EEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHH--HHHHhCCCcceeEEEEe
Confidence 677788888888876 66999999988765 566666533 3444433
No 206
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=27.91 E-value=89 Score=28.05 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=12.9
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
.+.++.||-||||--.
T Consensus 10 ~~~l~lfdvdgtLt~~ 25 (252)
T KOG3189|consen 10 EETLCLFDVDGTLTPP 25 (252)
T ss_pred CceEEEEecCCccccc
Confidence 4567788999999864
No 207
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.75 E-value=61 Score=30.02 Aligned_cols=37 Identities=24% Similarity=0.505 Sum_probs=33.6
Q ss_pred EeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH
Q 023829 152 VFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR 188 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~ 188 (276)
+.+|-|+.+|.+.|..+ ..+.|||+|--.-.+.++..
T Consensus 137 i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q 174 (298)
T KOG3128|consen 137 IALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQ 174 (298)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHH
Confidence 56999999999999988 99999999999888888775
No 208
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=27.50 E-value=10 Score=27.23 Aligned_cols=49 Identities=18% Similarity=0.169 Sum_probs=34.1
Q ss_pred cccccccccCcCCCcEEEEEcC-cccccCCCCCeeeeCccCCCCCCChHH
Q 023829 211 EHVKDLSCLSKDLCRTLIVDNN-PFSFLLQPLNGIPCIPFSAGQPHDNQV 259 (276)
Q Consensus 211 ~~~KdL~~L~rd~~~~IiVDDs-p~~~~~~p~NgI~V~~f~~g~~~D~eL 259 (276)
.+...++.++.+++++++|-|+ ..-.......|+..--...|.....++
T Consensus 9 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~ 58 (75)
T PF13242_consen 9 MLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDL 58 (75)
T ss_dssp HHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHH
Confidence 5667778889999999999999 666666666776655554444433333
No 209
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=26.89 E-value=79 Score=33.25 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=54.1
Q ss_pred eeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCceeEEEECCCccccCCccccccccccCcCCCcEEEEEc
Q 023829 153 FERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCRTLIVDN 231 (276)
Q Consensus 153 ~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~~IiVDD 231 (276)
..||++.+.++.|.+. +++++.|...+..|+.+++.++...++ .+...+....++.|+ . .+++++|-|
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~-------~~~p~~K~~~v~~l~---~-~~~v~mvGD 636 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA-------GLLPEDKVKAVTELN---Q-HAPLAMVGD 636 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec-------CCCHHHHHHHHHHHh---c-CCCEEEEEC
Confidence 3999999999999987 999999999999999999999875221 121111124555554 2 257999988
Q ss_pred Cccccc
Q 023829 232 NPFSFL 237 (276)
Q Consensus 232 sp~~~~ 237 (276)
.-.-..
T Consensus 637 giNDap 642 (741)
T PRK11033 637 GINDAP 642 (741)
T ss_pred CHHhHH
Confidence 766543
No 210
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=25.35 E-value=1.3e+02 Score=28.29 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=22.5
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHH
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDR 188 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~ 188 (276)
.=||..|-++.|... -.+++.|+.+-.--+.-+++
T Consensus 39 ~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK 74 (306)
T KOG2882|consen 39 PIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKK 74 (306)
T ss_pred CCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHH
Confidence 458888888888887 55666666654444444343
No 211
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=25.18 E-value=94 Score=23.33 Aligned_cols=14 Identities=29% Similarity=0.081 Sum_probs=11.6
Q ss_pred ceEEEEeCCCcccc
Q 023829 94 KLTVVLDLDETLVC 107 (276)
Q Consensus 94 k~tLVLDLDgTLv~ 107 (276)
..+|+|+-|||.|.
T Consensus 40 ~~~l~L~eDGTeVt 53 (77)
T cd06535 40 GSRLCLYEDGTEVT 53 (77)
T ss_pred CcEEEEecCCcEeh
Confidence 46789999999993
No 212
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=23.95 E-value=1.1e+02 Score=30.30 Aligned_cols=52 Identities=19% Similarity=0.377 Sum_probs=38.4
Q ss_pred eEEEeeCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh-cC------C--CceeEEEE
Q 023829 149 HVTVFERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI-DG------E--NLFSLRLY 200 (276)
Q Consensus 149 ~~~v~~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L-dp------~--~~f~~rl~ 200 (276)
.-|+.+-|.+..+|+.+++. -.+.+-|++.-.|++.+++.+ ++ . .+|+.++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 34577899999999999998 589999999999999999987 33 1 35776664
No 213
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=23.80 E-value=75 Score=28.72 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=33.4
Q ss_pred EeeCccHHHHHHHhhhcceEEEEccCchhhHHHHHHHh
Q 023829 152 VFERPGLREFLKQLSEFADLILFTAGLEGYARPLVDRI 189 (276)
Q Consensus 152 v~~RPgl~eFL~~l~~~yelvI~Ts~~~~yA~~vl~~L 189 (276)
+..|--+++|+.++++--..+|||+-.-+-++++||++
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrv 203 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRV 203 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheE
Confidence 44566788999999999999999999999999999975
No 214
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=23.71 E-value=43 Score=30.85 Aligned_cols=12 Identities=50% Similarity=0.667 Sum_probs=10.5
Q ss_pred eEEEEeCCCccc
Q 023829 95 LTVVLDLDETLV 106 (276)
Q Consensus 95 ~tLVLDLDgTLv 106 (276)
...|.|||||||
T Consensus 3 ~VfvWDlDETlI 14 (274)
T TIGR01658 3 NVYVWDMDETLI 14 (274)
T ss_pred eeEEEeccchHH
Confidence 457999999999
No 215
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=23.54 E-value=49 Score=30.14 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=57.0
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHh---cCC----CceeEEEECCCccccCCccccccccccCcCCCc
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRI---DGE----NLFSLRLYRPSTTSTEYREHVKDLSCLSKDLCR 225 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~L---dp~----~~f~~rl~r~~c~~~k~~~~~KdL~~L~rd~~~ 225 (276)
.=|.+-.+++.-+.. ..+.||++++..--.-+...- |.. ++|...+.+.- +...|.|....+|.+.++
T Consensus 124 v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~----e~~sy~~I~~~Ig~s~~e 199 (254)
T KOG2630|consen 124 VYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGLKV----ESQSYKKIGHLIGKSPRE 199 (254)
T ss_pred ccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcccccee----hhHHHHHHHHHhCCChhh
Confidence 446666777777655 899999999865333222221 222 23333322221 123678888889999999
Q ss_pred EEEEEcCcccccCCCCC----eeeeCccC
Q 023829 226 TLIVDNNPFSFLLQPLN----GIPCIPFS 250 (276)
Q Consensus 226 ~IiVDDsp~~~~~~p~N----gI~V~~f~ 250 (276)
++++-|.+......... +|.+.|=+
T Consensus 200 iLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 200 ILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred eEEeccChHHHHHHHhcccceeeeecCCC
Confidence 99999999875544433 44445443
No 216
>PF13575 DUF4135: Domain of unknown function (DUF4135)
Probab=21.92 E-value=72 Score=30.37 Aligned_cols=23 Identities=30% Similarity=0.661 Sum_probs=17.4
Q ss_pred ceeEeechhH---HHHHHHHHHHHHH
Q 023829 7 AEVAYSHRSI---QVWRTLLNWLAFF 29 (276)
Q Consensus 7 ~~~~~~~~~~---~~~~~~~~~~~~~ 29 (276)
..+||.||+. +++..++.|+.-.
T Consensus 71 ~kivYKPRsl~~d~~f~~l~~~ln~~ 96 (370)
T PF13575_consen 71 KKIVYKPRSLSIDKAFNDLLEWLNEK 96 (370)
T ss_pred CEEEEeCcccHHHHHHHHHHHHHhhh
Confidence 4899999987 5677777777654
No 217
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=21.20 E-value=1.1e+02 Score=32.77 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=38.2
Q ss_pred eCccHHHHHHHhhhc-ceEEEEccCchhhHHHHHHHhcCCCce
Q 023829 154 ERPGLREFLKQLSEF-ADLILFTAGLEGYARPLVDRIDGENLF 195 (276)
Q Consensus 154 ~RPgl~eFL~~l~~~-yelvI~Ts~~~~yA~~vl~~Ldp~~~f 195 (276)
.|||+.+.++.|.+. ..+++.|.-.+..|..+.+.++....+
T Consensus 529 ~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~ 571 (884)
T TIGR01522 529 PRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT 571 (884)
T ss_pred chhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC
Confidence 799999999999987 999999999999999999999875443
No 218
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=20.49 E-value=56 Score=32.54 Aligned_cols=16 Identities=38% Similarity=0.437 Sum_probs=14.2
Q ss_pred CceEEEEeCCCccccc
Q 023829 93 QKLTVVLDLDETLVCA 108 (276)
Q Consensus 93 ~k~tLVLDLDgTLv~s 108 (276)
.++.||.|+|||+-.+
T Consensus 374 n~kiVVsDiDGTITkS 389 (580)
T COG5083 374 NKKIVVSDIDGTITKS 389 (580)
T ss_pred CCcEEEEecCCcEEeh
Confidence 5789999999999975
Done!