BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023831
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28CB1|TBD2B_XENTR TBC1 domain family member 2B OS=Xenopus tropicalis GN=tbc1d2b PE=2
SV=1
Length = 943
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 101/173 (58%), Gaps = 5/173 (2%)
Query: 103 LANAITLKKLIRKGIPPVLRPKVW--FSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATK 160
+A + LK L+R GIP R ++W F+ K K Y+ L + K PA+K
Sbjct: 629 MACSPELKALVRNGIPHEHRSRMWKWFTNLHIKKLKDEAAPGYFQSLLQNALEKQNPASK 688
Query: 161 QIDHDLPRTFPGHPWLDTP--DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKT 218
QI+ DL RT P + +P +G LR VL+ YS+R+ D+GYCQG+N +AA+ LL +
Sbjct: 689 QIELDLMRTLPNNKHYTSPTSEGIQKLRNVLLAYSWRNPDIGYCQGINRLAAIALLYL-D 747
Query: 219 EEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEF 271
+EDAFW L ++E + D YT L G V+QRVFKDL+ ++ PR +E++
Sbjct: 748 QEDAFWCLVTIVEAFMPRDYYTKTLLGSQVDQRVFKDLMNEKLPRLCAHFEQY 800
>sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapiens GN=TBC1D9 PE=2 SV=2
Length = 1266
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
++L+ KGIP +R ++W LSGA +K+T P YY DL + GK AT++I+ DL R+
Sbjct: 509 RELVLKGIPESMRGELWLLLSGAINEKATHP-GYYEDLVEKSMGKYNLATEEIERDLHRS 567
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP G A LRRVL Y+FR+ ++GYCQ +N V ++LLL K EE+AFW+L L
Sbjct: 568 LPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAK-EEEAFWLLVAL 626
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
E +L D Y + G V+Q VF++L P+
Sbjct: 627 CERML-PDYYNTRVVGALVDQGVFEELARDYVPQ 659
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 3/166 (1%)
Query: 100 LSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPAT 159
L LA ++ LK+L+R G+P RP+VW L + P +Y +L + + PA
Sbjct: 615 LGDLAPSVELKQLLRAGVPREHRPRVWKWLVQLRVRHLQSP-GHYQELLSRGQVREHPAA 673
Query: 160 KQIDHDLPRTFPGHPWLDTPDGH--ATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMK 217
+QI+ DL RTFP + P LRRVL+ +S+++ +GYCQGLN +AA+ LLV++
Sbjct: 674 RQIELDLNRTFPNNKHFTCPTSTFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLE 733
Query: 218 TEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
EE AFW L ++E ++ D Y+ L+ V+QRV +DLL+++ PR
Sbjct: 734 EEESAFWCLVAIVETIMPADYYSKTLTSSQVDQRVLQDLLLEKLPR 779
>sp|Q9BYX2|TBD2A_HUMAN TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3
Length = 928
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 3/166 (1%)
Query: 100 LSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPAT 159
L L + LK+L+R G+P RP+VW L + P Y L++ + + PA
Sbjct: 609 LGDLVPSAELKQLLRAGVPREHRPRVWRWLVHLRVQHLHTPGCYQELLSRG-QAREHPAA 667
Query: 160 KQIDHDLPRTFPGHPWLDTPDGH--ATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMK 217
+QI+ DL RTFP + P LRRVL+ +S+++ +GYCQGLN +AA+ LLV++
Sbjct: 668 RQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLE 727
Query: 218 TEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
EE AFW L ++E ++ D Y N L+ V+QRV +DLL ++ PR
Sbjct: 728 EEESAFWCLVAIVETIMPADYYCNTLTASQVDQRVLQDLLSEKLPR 773
>sp|Q3UYK3|TBCD9_MOUSE TBC1 domain family member 9 OS=Mus musculus GN=Tbc1d9 PE=2 SV=2
Length = 1264
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
++L+ KGIP +R ++W LSGA +K+T P YY L + GK AT++I+ DL R+
Sbjct: 509 RELVLKGIPESMRGELWLLLSGAINEKATHP-GYYEGLVEKSMGKYNLATEEIERDLHRS 567
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP G A LRRVL Y+FR+ ++GYCQ +N V ++LLL K EE+AFW+L L
Sbjct: 568 LPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAK-EEEAFWLLVAL 626
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
E +L D Y + G V+Q VF++L P+
Sbjct: 627 CERML-PDYYNTRVVGALVDQGVFEELARDYVPQ 659
>sp|Q3U0J8|TBD2B_MOUSE TBC1 domain family member 2B OS=Mus musculus GN=Tbc1d2b PE=1 SV=2
Length = 965
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 103 LANAITLKKLIRKGIPPVLRPKVW---FSLSGAAKKKSTVPESYYNDLTKAVEGKVTPAT 159
+A + LK LIR GIP R KVW K S P+ + L KA+E K PA+
Sbjct: 651 MACSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDSMEPDYFQTLLQKALE-KQNPAS 709
Query: 160 KQIDHDLPRTFPGHPWLDTP--DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMK 217
KQI+ DL RT P + +P +G LR VL+ +S+R+ D+GYCQGLN + A+ LL +
Sbjct: 710 KQIELDLLRTLPNNKHYSSPTSEGIQKLRSVLLAFSWRNPDIGYCQGLNRLVAVALLYL- 768
Query: 218 TEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEF 271
+EDAFW L ++E + D YT L G V+QRVF+DLL ++ PR +E++
Sbjct: 769 DQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLLSEKLPRLHTHFEQY 822
>sp|Q9UPU7|TBD2B_HUMAN TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2
Length = 963
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Query: 109 LKKLIRKGIPPVLRPKVW---FSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHD 165
LK LIR GIP R KVW K +T P + L KA+E K PA+KQI+ D
Sbjct: 655 LKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDNTEPGHFQTLLQKALE-KQNPASKQIELD 713
Query: 166 LPRTFPG--HPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAF 223
L RT P H T +G LR VL+ +S+R+ D+GYCQGLN + A+ LL ++ +EDAF
Sbjct: 714 LLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLE-QEDAF 772
Query: 224 WMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEF 271
W L ++E + D YT L G V+QRVF+DL+ ++ PR +E++
Sbjct: 773 WCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQY 820
>sp|A6QP29|TBD2A_BOVIN TBC1 domain family member 2A OS=Bos taurus GN=TBC1D2 PE=2 SV=1
Length = 925
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 100 LSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPAT 159
L LA + LK+L+R G+P RP+VW L + P Y L++ K + A
Sbjct: 606 LGELAPSAELKQLLRAGVPHEHRPRVWRWLIRLRVQHLQAPGCYQALLSRGQACKHS-AA 664
Query: 160 KQIDHDLPRTFPGHPWLDTPDGH--ATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMK 217
+QI+ DL RTFP + P LRRVL+ +S+++ +GYCQGLN +AA+ LLV+
Sbjct: 665 RQIELDLNRTFPNNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLD 724
Query: 218 TEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
EE AFW L ++E ++ D Y+ L V+QRV +DLL+++ PR
Sbjct: 725 EEESAFWCLVAIVETIMPADYYSKTLLASQVDQRVLQDLLLEKLPR 770
>sp|B1AVH7|TBD2A_MOUSE TBC1 domain family member 2A OS=Mus musculus GN=Tbc1d2 PE=2 SV=1
Length = 922
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
Query: 100 LSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPAT 159
L+ L + LK+L+R G+P RP+VW L + P Y L + + PA
Sbjct: 603 LTELTPSAELKQLLRAGVPREHRPRVWRWLVHRRVRHLQAPGCYQELLARGRACE-HPAA 661
Query: 160 KQIDHDLPRTFPGHPWLDTPDGH--ATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMK 217
+QI+ DL RTFP + P LRRVL+ +S+++ +GYCQGLN +AA+ LLV++
Sbjct: 662 RQIELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLE 721
Query: 218 TEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
EE AFW L ++E +L + Y+ L+ V+QRV +DLL ++ PR
Sbjct: 722 DEESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDLLSEKLPR 767
>sp|Q5SVR0|TBC9B_MOUSE TBC1 domain family member 9B OS=Mus musculus GN=Tbc1d9b PE=2 SV=1
Length = 1263
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
++L+ KGIP LR ++W SGA + T P YY +L + GK + AT++I+ DL R+
Sbjct: 503 RELVLKGIPESLRGELWLLFSGAWNEMVTHP-GYYAELVEKSLGKYSLATEEIERDLHRS 561
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP G A LRRVL Y+FR+ +GYCQ +N V ++LLL +EE+AFW+L L
Sbjct: 562 MPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLLY-GSEEEAFWLLVAL 620
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEF 271
E +L D Y + G V+Q +F++L PR + +E
Sbjct: 621 CERML-PDYYNTRVVGALVDQGIFEELTRDVLPRLSEKMQEL 661
>sp|A6H8I2|SGSM3_XENLA Small G protein signaling modulator 3 homolog OS=Xenopus laevis
GN=sgsm3 PE=2 SV=1
Length = 753
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 4/171 (2%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
+L ++ L+ L+ GIP +RP++W LSGA +KK E Y D+ + T A KQ
Sbjct: 101 TLPHSDKLRSLVLAGIPHSMRPQLWMRLSGALQKKQN-SEMTYKDIGRNSSNDDTLAAKQ 159
Query: 162 IDHDLPRTFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTE 219
I+ DL RT P + G LRRVL G ++ D+GYCQG VAA LLL ++ E
Sbjct: 160 IEKDLLRTMPSNACFSNLQSVGVPRLRRVLRGLAWLFPDIGYCQGTGMVAACLLLFLE-E 218
Query: 220 EDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
EDAFWM+A ++E+++ + L G +QRV + L+V+ PR + +E
Sbjct: 219 EDAFWMMATIVEDLVPVSYFNTTLVGVQTDQRVLRHLIVQYLPRLDKLLQE 269
>sp|Q7T2D0|SGSM3_DANRE Small G protein signaling modulator 3 OS=Danio rerio GN=sgsm3 PE=2
SV=1
Length = 755
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 99/171 (57%), Gaps = 4/171 (2%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
+LA + L+ L+ GIP +RP++W LSGA +KK T SY ++ K T A KQ
Sbjct: 101 TLARSDRLRSLVLGGIPHSMRPQLWMRLSGALQKKRTSDISY-REIVKNSSNDDTTAAKQ 159
Query: 162 IDHDLPRTFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTE 219
I+ DL RT P + +T G LRRVL G ++ D+GYCQG V + LLL ++ E
Sbjct: 160 IEKDLLRTMPTNACFNTLTSVGVPKLRRVLRGLAWLYPDIGYCQGTGMVVSCLLLFLE-E 218
Query: 220 EDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
EDA WM+ L+E++L +++ L G +QRV + L+V+ PR + +E
Sbjct: 219 EDALWMMCALIEDLLPPSYFSSTLLGVQTDQRVLRQLIVQYLPRLDKLLQE 269
>sp|Q66K14|TBC9B_HUMAN TBC1 domain family member 9B OS=Homo sapiens GN=TBC1D9B PE=1 SV=3
Length = 1250
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
+ L+ KGIP LR ++W SGA + T P YY +L + GK + AT++I+ DL R+
Sbjct: 502 RALVLKGIPESLRGELWLLFSGAWNEMVTHP-GYYAELVEKSTGKYSLATEEIERDLHRS 560
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP G A LRRVL Y+FR+ +GYCQ +N V ++LLL +EE+AFW+L L
Sbjct: 561 MPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLLY-GSEEEAFWLLVAL 619
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDL 256
E +L D Y + G V+Q +F++L
Sbjct: 620 CERML-PDYYNTRVVGALVDQGIFEEL 645
>sp|B5DFA1|TBD2A_RAT TBC1 domain family member 2A OS=Rattus norvegicus GN=Tbc1d2 PE=2
SV=1
Length = 924
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 100 LSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPAT 159
L+ L + LK+L+R G+P RP+VW L + + Y +L PA
Sbjct: 605 LTELMPSAELKQLLRAGVPREHRPRVWRWLVHR-RVQHLHSSGCYQELLARGRACEHPAA 663
Query: 160 KQIDHDLPRTFPGHPWLDTPDGH--ATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMK 217
+QI+ DL RTFP + P LRRVL+ +S+++ +GYCQGLN +AA+ LLV++
Sbjct: 664 RQIELDLNRTFPTNKHFTCPTSSFPDKLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLE 723
Query: 218 TEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
EE AFW L ++E +L + Y+ L+ V+QRV +DLL ++ PR
Sbjct: 724 DEESAFWCLVAIVETILPAEYYSKTLTASQVDQRVLQDLLSEKLPR 769
>sp|Q9Z1A9|TBCD8_MOUSE TBC1 domain family member 8 OS=Mus musculus GN=Tbc1d8 PE=2 SV=2
Length = 1134
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
++KL+ GIP LR ++W S A ++ P YY +L + G+ T++I+ DL R
Sbjct: 497 IRKLVAMGIPESLRGRLWLLFSDAVTDLASHP-GYYGNLVEQSLGRCCLVTEEIERDLHR 555
Query: 169 TFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAV 228
+ P HP G A LRRVL Y+ R+ +GYCQ +N + ++LLL K EE+AFW+L
Sbjct: 556 SLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYAK-EEEAFWLLVA 614
Query: 229 LLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYA 265
+ E +L D + + + G V+Q VF++L+ +Q P A
Sbjct: 615 VCERML-PDYFNHRVIGAQVDQSVFEELIKEQLPELA 650
>sp|Q0IIM8|TBC8B_HUMAN TBC1 domain family member 8B OS=Homo sapiens GN=TBC1D8B PE=1 SV=2
Length = 1120
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 92/154 (59%), Gaps = 3/154 (1%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
+ L+ +GIP LR ++W SGA +T P+ YY ++ + G AT++I+ DL R+
Sbjct: 481 RDLVVRGIPETLRGELWMLFSGAVNDMATNPD-YYTEVVEQSLGTCNLATEEIERDLRRS 539
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP + G + LRRVL Y++R+ +GYCQ +N + ++LLL K EE+AFW+L +
Sbjct: 540 LPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAK-EEEAFWLLVAV 598
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
E +L D + + G V+Q VF++L+ P+
Sbjct: 599 CERMLP-DYFNRRIIGALVDQAVFEELIRDHLPQ 631
>sp|O95759|TBCD8_HUMAN TBC1 domain family member 8 OS=Homo sapiens GN=TBC1D8 PE=1 SV=3
Length = 1140
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
++KL+ GIP LR ++W S A ++ P YY +L + GK T++I+ DL R
Sbjct: 498 IRKLVAMGIPESLRGRLWLLFSDAVTDLASHP-GYYGNLVEESLGKCCLVTEEIERDLHR 556
Query: 169 TFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAV 228
+ P HP G A LRRVL Y+ R+ +GYCQ +N + ++LLL K EE+AFW+L
Sbjct: 557 SLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYTK-EEEAFWLLVA 615
Query: 229 LLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYA 265
+ E +L D + + + G V+Q VF++L+ P A
Sbjct: 616 VCERML-PDYFNHRVIGAQVDQSVFEELIKGHLPELA 651
>sp|A3KGB4|TBC8B_MOUSE TBC1 domain family member 8B OS=Mus musculus GN=Tbc1d8b PE=2 SV=1
Length = 1114
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
+ L+ +GIP LR ++W SGA +T P YY ++ + G AT++I+ DL R+
Sbjct: 480 RDLVVRGIPETLRGELWMLFSGAVNDMATNP-GYYAEVVEQSLGTSNLATEEIERDLRRS 538
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP + G + LRRVL Y++R+ +GYCQ +N + ++LLL K EE+AFW+L +
Sbjct: 539 LPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAK-EEEAFWLLVAV 597
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
E +L D + + G V+Q VF++L+ P+
Sbjct: 598 CERMLP-DYFNRRIIGALVDQAVFEELIRDHLPQ 630
>sp|Q96HU1|SGSM3_HUMAN Small G protein signaling modulator 3 OS=Homo sapiens GN=SGSM3 PE=1
SV=1
Length = 749
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 97/171 (56%), Gaps = 4/171 (2%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
SL + L+ L+ GIP +RP++W LSGA +KK E Y ++ K T A KQ
Sbjct: 100 SLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRN-SELSYREIVKNSSNDETIAAKQ 158
Query: 162 IDHDLPRTFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTE 219
I+ DL RT P + + G LRRVL ++ ++GYCQG VAA LLL ++ E
Sbjct: 159 IEKDLLRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-E 217
Query: 220 EDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
EDAFWM++ ++E++L ++ L G +QRV + L+V+ PR + +E
Sbjct: 218 EDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQE 268
>sp|Q6P6R7|SGSM3_RAT Small G protein signaling modulator 3 OS=Rattus norvegicus GN=Sgsm3
PE=1 SV=1
Length = 749
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
SL + L+ L+ GIP +RP++W LSGA +KK E Y ++ K T A KQ
Sbjct: 99 SLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKKN-SELSYREIVKNSSNDETIAAKQ 157
Query: 162 IDHDLPRTFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTE 219
I+ DL RT P + + G LRRVL ++ ++GYCQG VAA LLL ++ E
Sbjct: 158 IEKDLLRTMPSNACFANVNSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-E 216
Query: 220 EDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
EDAFWM+ ++E++L ++ L G +QRV + L+V+ PR + +E
Sbjct: 217 EDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQE 267
>sp|Q8VCZ6|SGSM3_MOUSE Small G protein signaling modulator 3 OS=Mus musculus GN=Sgsm3 PE=1
SV=1
Length = 750
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
SL + L+ L+ GIP +RP++W LSGA +KK E Y ++ K T A KQ
Sbjct: 100 SLPRSEKLRSLVLAGIPHGMRPQLWMRLSGALQKKKN-SELSYREIIKNSSNDETIAAKQ 158
Query: 162 IDHDLPRTFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTE 219
I+ DL RT P + + G LRRVL ++ ++GYCQG VAA LLL ++ E
Sbjct: 159 IEKDLLRTMPSNACFANVNSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-E 217
Query: 220 EDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
EDAFWM+ ++E++L ++ L G +QRV + L+V+ PR + +E
Sbjct: 218 EDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQE 268
>sp|Q2KI13|SGSM3_BOVIN Small G protein signaling modulator 3 OS=Bos taurus GN=SGSM3 PE=2
SV=1
Length = 747
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
SL + L+ L+ G+P +RP++W LSGA +KK E Y ++ K T A KQ
Sbjct: 97 SLPRSEKLRSLVLAGVPHSMRPQLWMRLSGALQKKRN-SELSYREIVKNSSNDETIAAKQ 155
Query: 162 IDHDLPRTFPGHPWLDTPDGHAT--LRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTE 219
I+ DL RT P + G LRRVL ++ ++GYCQG VAA LLL ++ E
Sbjct: 156 IEKDLLRTMPSNACFAHVSGVGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLE-E 214
Query: 220 EDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
+DAFWM+ ++E++L ++ L G +QRV + L+V+ PR + +E
Sbjct: 215 DDAFWMMCAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDRLLQE 265
>sp|B0R0W9|TBC8B_DANRE TBC1 domain family member 8B OS=Danio rerio GN=tbc1d8b PE=4 SV=1
Length = 1108
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
+ LI +G+P LR ++W SGA + P YY L + G + A +I+ DL R+
Sbjct: 463 RDLIVRGVPETLRGELWMLFSGAVHDMISHP-GYYGRLLEDCMGSSSLACDEIERDLHRS 521
Query: 170 FPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVL 229
P HP + G + LRRVL Y+ R+ +GYCQ +N + ++LLL K EE+AFW+L +
Sbjct: 522 LPEHPAFQSDTGISALRRVLTAYAHRNPKIGYCQAMNILTSVLLLYAK-EEEAFWLLVAV 580
Query: 230 LENVLVNDCYTNNLSGCHVEQRVFKDLL 257
E +L D + + G V+Q VF++L+
Sbjct: 581 CERML-PDYFNRRIIGALVDQAVFEELI 607
>sp|C8VDQ4|GYP2_EMENI Putative GTPase-activating protein AN11010 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN11010 PE=4 SV=1
Length = 1120
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 98/172 (56%), Gaps = 3/172 (1%)
Query: 91 GIALKSSLKLSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKA 150
G + + + ++L T KLIR G+P LR ++W SG+ + P+ Y L K
Sbjct: 266 GEYFRENGRNATLIRQPTFHKLIRVGLPNRLRGEIWEVASGSLNLRLRSPKLYEQTLAK- 324
Query: 151 VEGKVTPATKQIDHDLPRTFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAA 210
EG+ + A +I+ DL R+ P + + +G LRRVL YS+ ++++GYCQ +N V A
Sbjct: 325 FEGQESLAIDEIEKDLNRSLPEYAGFQSEEGIGRLRRVLTAYSWTNAEIGYCQAMNIVVA 384
Query: 211 LLLLVMKTEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
LL+ M +E AF++L+VL + LV Y+ + G ++Q+VF+ L+ K P
Sbjct: 385 ALLIYM-SEAQAFFLLSVLCDR-LVPGYYSTTMYGTLLDQKVFESLVEKTMP 434
>sp|Q09830|YAD4_SCHPO TBC domain-containing protein C4G8.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G8.04 PE=1 SV=1
Length = 772
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
++L++ G+P + KVW SGA + S YY +L + + + QID D+ R
Sbjct: 497 FRELVKNGVPLCYKAKVWLECSGAYQLHSP---GYYEELLSRTDEVESASVAQIDMDINR 553
Query: 169 TFPGHPWLDTPD-GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLA 227
T + + G LRR+LV YS + +GYCQG+N + A LLL+ +EEDAF+ML
Sbjct: 554 TMAKNVFFGGKGPGIPKLRRILVAYSRHNPHIGYCQGMNVIGAFLLLLYASEEDAFYMLM 613
Query: 228 VLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
++ENVL +T +L +Q V K + + P
Sbjct: 614 SIIENVLPPKYFTPDLMTSRADQLVLKSFVKESLPE 649
>sp|Q6GLZ0|GRTP1_XENLA Growth hormone-regulated TBC protein 1 OS=Xenopus laevis GN=grtp1
PE=2 SV=1
Length = 342
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Query: 101 SSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATK 160
+++ +I +K+ IRKGIP R VW +SGA + + + Y+ + +EG+ P
Sbjct: 57 AAVEKSIKVKRYIRKGIPNEHRSHVWMVVSGA-QAQMGMNTGYFRRMF--IEGEKNPKLL 113
Query: 161 Q-IDHDLPRTFPGHPWL---DTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVM 216
++ DL RTFP + P L VLV Y ++ VGYCQG+N++A L+LV
Sbjct: 114 DLVNTDLNRTFPDNVQFRKNSNPSLQKHLYNVLVAYGQHNTTVGYCQGMNFIAGYLILVT 173
Query: 217 KTEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
K EE AFW++ L+ +L D Y+ ++G +Q V DL+ K+ P
Sbjct: 174 KDEEKAFWLMDALIGRIL-PDYYSPAMTGLKTDQEVLGDLVKKKLP 218
>sp|P53258|GYP2_YEAST GTPase-activating protein GYP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDR1 PE=1 SV=1
Length = 950
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
+KLIR G+P +R ++W SGA + Y L + GK + A +I+ DL R
Sbjct: 237 FRKLIRIGVPNRMRGEIWELCSGAMYMRYANSGEYERILNENA-GKTSQAIDEIEKDLKR 295
Query: 169 TFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAV 228
+ P + T +G LR VL YS+++ DVGYCQ +N V A L+ M +EE AFW L
Sbjct: 296 SLPEYSAYQTEEGIQRLRNVLTAYSWKNPDVGYCQAMNIVVAGFLIFM-SEEQAFWCLCN 354
Query: 229 LLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
L ++ V Y+ + G ++QRVF+ + + P
Sbjct: 355 LC-DIYVPGYYSKTMYGTLLDQRVFESFVEDRMP 387
>sp|Q6PBU5|GRT1A_DANRE Growth hormone-regulated TBC protein 1-A OS=Danio rerio GN=grtp1a
PE=2 SV=1
Length = 356
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 69 WALEASKGANWYLQPQIASISEGIALKSSLKLSSLANA-------ITLKKLIRKGIPPVL 121
+ + S ++ Q+ S + + S++ + L + +K+ +RKG+P
Sbjct: 33 YGFQRSDDFDYETHEQLMSEYLAVLTRRSIRWAKLLQGRRRVDRNLKVKRYVRKGVPNEH 92
Query: 122 RPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRTFPGHPWLDT--- 178
RP VW SGA ++ P Y + L E K+ + I DL RTFP + +
Sbjct: 93 RPLVWMVCSGAQEQMDRNPGYYQSLLDTHHEPKLEES---IRTDLHRTFPDNIYFRKSAE 149
Query: 179 PDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVLLENVLVNDC 238
P L VLV Y + VGYCQG+N++A L+LV K EE +FW++ LL +L D
Sbjct: 150 PCLQQALYNVLVAYGHHNKAVGYCQGMNFIAGYLILVSKDEETSFWLMEALLSRIL-PDY 208
Query: 239 YTNNLSGCHVEQRVFKDLLVKQCP 262
YT + G +Q V +L+ + P
Sbjct: 209 YTPAMLGLKTDQEVLGELVRLKAP 232
>sp|Q6GL87|GRTP1_XENTR Growth hormone-regulated TBC protein 1 OS=Xenopus tropicalis
GN=grtp1 PE=2 SV=1
Length = 342
Score = 95.1 bits (235), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 101 SSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATK 160
+++ + +K+ IRKGIP R VW +SGA + + + Y+ + EG+ P K
Sbjct: 57 AAVEKNMKVKRYIRKGIPNEHRSHVWMVVSGA-QAQMDMNTGYFRRM--FTEGEKNP--K 111
Query: 161 QID---HDLPRTFPGHPWLD---TPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLL 214
+D DL RTFP + P L VLV Y + VGYCQG+N++A L+L
Sbjct: 112 LLDLVITDLNRTFPDNVLFQKNANPSLQKDLYNVLVAYGQHNKTVGYCQGMNFIAGYLIL 171
Query: 215 VMKTEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYE 269
V K EE AFW++ L+ +L D Y+ ++G +Q V DL+ K+ P A + E
Sbjct: 172 VTKDEEKAFWLMDALIGQIL-PDYYSPAMTGLKTDQEVLGDLVKKKIPSVAQLIE 225
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 108 TLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ-IDHDL 166
T+K+ +RKG+P R +VW LSGA + P YY+ L ++G+ P + I DL
Sbjct: 60 TVKRYVRKGVPLEHRARVWMVLSGAQAQMDQNP-GYYHQL---LQGERNPRLEDAIRTDL 115
Query: 167 PRTFPGHPWL---DTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAF 223
RTFP + P TL VL+ Y + VGYCQG+N++A L+L+ EE++F
Sbjct: 116 NRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESF 175
Query: 224 WMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEF 271
W+L L+ +L D Y+ + G +Q V +L+ + P + E
Sbjct: 176 WLLDALVGRIL-PDYYSPAMLGLKTDQEVLGELVRAKLPAVGALMERL 222
>sp|Q9D3N8|GRTP1_MOUSE Growth hormone-regulated TBC protein 1 OS=Mus musculus GN=Grtp1
PE=2 SV=1
Length = 359
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 26/182 (14%)
Query: 105 NAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ-ID 163
++T+K+ +RKGIP R +VW ++SGA + P YY+ L +EG+ + + + I
Sbjct: 63 KSVTVKRYVRKGIPLEHRARVWMAVSGAQARMDQSP-GYYHRL---LEGESSSSLDEAIR 118
Query: 164 HDLPRTFPGHPWLDT---PDGHATLRRVLVGYSFRDSDVGYCQ----------------- 203
DL RTFP + P TL VL+ Y + DVGYCQ
Sbjct: 119 TDLNRTFPDNVMFRKTADPCLQKTLYNVLLAYGLHNPDVGYCQCCAQKPGSSAGLRSSLT 178
Query: 204 GLNYVAALLLLVMKTEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPR 263
G+N++A L+L+ K EE++FW+L L+ +L D Y+ + G +Q V +L+ + P
Sbjct: 179 GMNFIAGYLILITKNEEESFWLLDALVGRIL-PDYYSPAMLGLKTDQEVLAELVRMKLPA 237
Query: 264 YA 265
A
Sbjct: 238 VA 239
>sp|O43048|YH51_SCHPO TBC domain-containing protein C215.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC215.01 PE=3 SV=4
Length = 834
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 102 SLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ 161
SL KL+R +P LR ++W SG+ + + Y + L K G+ + + ++
Sbjct: 206 SLIRVSLFSKLVRIELPNKLRGEIWELTSGSMYFRLENSDEY-DHLLKVYSGQTSFSLEE 264
Query: 162 IDHDLPRTFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEED 221
I+ DL R+ P +P +G LR VLV +S+++ +VGYCQ +N VAA LL+ TEE
Sbjct: 265 IEKDLGRSLPEYPAYQNEEGINALRNVLVAFSWKNQEVGYCQAMNIVAA-ALLIHCTEEQ 323
Query: 222 AFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
F+++ + E+ + Y+ + G ++Q+V++ L+ + P
Sbjct: 324 TFFLMHKICEDY-IPGYYSKTMYGTLIDQQVYESLVQRSMP 363
>sp|A6H6A9|RBG1L_MOUSE Rab GTPase-activating protein 1-like OS=Mus musculus GN=Rabgap1l
PE=1 SV=1
Length = 815
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L++ G+P LR +VW L+G + + D + + K + I D+ R
Sbjct: 531 LFTLVKSGVPEALRAEVWQLLAGCHDNQEML------DKYRILITKDSAQESVITRDIHR 584
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D D+GYCQG +++AA+LLL M EE AF +L
Sbjct: 585 TFPAHDYFKDTGGDGQESLYKICKAYSVFDEDIGYCQGQSFLAAVLLLHM-PEEQAFCVL 643
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDI 274
++ + D Y NN H + + L+ +Q P +Y F D+
Sbjct: 644 VTIMYGYKLRDLYRNNFEDLHCKFYQLEKLMQEQLPD---LYSHFCDL 688
>sp|Q5RCW6|RBG1L_PONAB Rab GTPase-activating protein 1-like OS=Pongo abelii GN=RABGAP1L
PE=2 SV=1
Length = 815
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L++ G+P LR +VW L+G ++ + D + + K + I D+ R
Sbjct: 531 LSTLVKSGVPEALRAEVWQLLAGCHDNQAML------DRYRILITKDSAQESVITRDIHR 584
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D D+GYCQG +++AA+LLL M EE AF +L
Sbjct: 585 TFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHM-PEEQAFCVL 643
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
++ + + D Y NN H + + L+ +Q P
Sbjct: 644 VKIMYDYGLRDLYKNNFEDLHCKFYQLERLMQEQLP 679
>sp|Q09445|GRTP6_CAEEL Growth hormone-regulated TBC protein 6 OS=Caenorhabditis elegans
GN=tbc-6 PE=4 SV=3
Length = 330
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 105 NAITLKKLIRKGIPPVLRPKVWF----SLSGAAKKKSTVPESYYNDLTKAVEGKVTPATK 160
N+ L++ +RKGIP R ++W S + ++ VP+ K
Sbjct: 67 NSHLLQRFVRKGIPHTFRKELWLRSCPSRADGVWQRHEVPDE---------------VIK 111
Query: 161 QIDHDLPRTFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEE 220
QI DLPRTFP + +L T TL R L + VGYCQGLN+VA ++LLV+ E
Sbjct: 112 QIKLDLPRTFPDNKFLKTEGTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVNDES 171
Query: 221 DAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDI 274
A +L L+ + Y N+ G + V LL + CPR + E+ LD+
Sbjct: 172 RAIDLLVHLVSQ--RQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEK-LDV 222
>sp|Q5R372|RBG1L_HUMAN Rab GTPase-activating protein 1-like OS=Homo sapiens GN=RABGAP1L
PE=1 SV=1
Length = 815
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 9/156 (5%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L++ G+P LR +VW L+G ++ + D + + K + I D+ R
Sbjct: 531 LSTLVKSGVPEALRAEVWQLLAGCHDNQAML------DRYRILITKDSAQESVITRDIHR 584
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D D+GYCQG +++AA+LLL M EE AF +L
Sbjct: 585 TFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHM-PEEQAFCVL 643
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
++ + + D Y NN H + + L+ +Q P
Sbjct: 644 VKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLP 679
>sp|Q5ZJ17|RBG1L_CHICK Rab GTPase-activating protein 1-like OS=Gallus gallus GN=RABGAP1L
PE=2 SV=1
Length = 816
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L+++G+P LR +VW L+G ++ + D + + + I D+ R
Sbjct: 532 LSTLVKRGVPEALRAEVWQLLAGCHDNEAML------DKYRILITMDSAQENVITRDIHR 585
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D D+GYCQG +++AA+LLL M EE AF +
Sbjct: 586 TFPAHDYFKDTEGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHM-PEEQAFCVF 644
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDI 274
++ + + D Y NN H + + L+ +Q P +Y F D+
Sbjct: 645 VKIMYDYGLRDLYRNNFEDLHCKFFQLEKLMQEQLPD---LYSHFSDL 689
>sp|Q5RAN1|RBGP1_PONAB Rab GTPase-activating protein 1 OS=Pongo abelii GN=RABGAP1 PE=2
SV=1
Length = 1069
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L+R G+P LR +VW L+G V E Y +TK +P I D+ R
Sbjct: 559 LSSLVRNGVPEALRGEVWQLLAGCHNNDHLV-EKYRILITKE-----SPQDSAITRDINR 612
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D ++GYCQG +++AA+LLL M EE AF +L
Sbjct: 613 TFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHM-PEEQAFSVL 671
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDI 274
++ + + + + N H + + L+ + P +Y FLDI
Sbjct: 672 VKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPD---LYNHFLDI 716
>sp|Q9Y3P9|RBGP1_HUMAN Rab GTPase-activating protein 1 OS=Homo sapiens GN=RABGAP1 PE=1
SV=3
Length = 1069
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L+R G+P LR +VW L+G V E Y +TK +P I D+ R
Sbjct: 559 LSSLVRNGVPEALRGEVWQLLAGCHNNDHLV-EKYRILITKE-----SPQDSAITRDINR 612
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D ++GYCQG +++AA+LLL M EE AF +L
Sbjct: 613 TFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHM-PEEQAFSVL 671
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDI 274
++ + + + + N H + + L+ + P +Y FLDI
Sbjct: 672 VKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPD---LYNHFLDI 716
>sp|A2AWA9|RBGP1_MOUSE Rab GTPase-activating protein 1 OS=Mus musculus GN=Rabgap1 PE=2
SV=1
Length = 1064
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 12/168 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
L L+R G+P LR +VW L+G V E Y +TK +P I D+ R
Sbjct: 554 LSSLVRSGVPEALRGEVWQLLAGCHNNDHLV-EKYRILITKE-----SPQDSAITRDINR 607
Query: 169 TFPGHPWL-DTP-DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
TFP H + DT DG +L ++ YS D ++GYCQG +++AA+LLL M EE AF +L
Sbjct: 608 TFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHM-PEEQAFSVL 666
Query: 227 AVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDI 274
++ + + + + N H + + L+ + P +Y FLDI
Sbjct: 667 VKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPD---LYNHFLDI 711
>sp|Q12317|MSB4_YEAST GTPase-activating protein MSB4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSB4 PE=1 SV=1
Length = 492
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 104 ANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ-I 162
A L K +RKGIP R W+ +G ++ Y + EG V+ + I
Sbjct: 135 ARTDELSKFVRKGIPAEWRGNAWWYFAGGQRQLDANVGVYDRLKSDCREGAVSGKDMEAI 194
Query: 163 DHDLPRTFPGHPWLDT-------PDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLV 215
+ DL RTFP + P +LRRVL+ +S D +GYCQ +N++ LLLL
Sbjct: 195 ERDLYRTFPDNIHFHKESFQNGEPAIIRSLRRVLMAFSVYDKTIGYCQSMNFLVGLLLLF 254
Query: 216 MKTEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRV 252
M+ EE AFWML ++ L Y ++L G +V+Q V
Sbjct: 255 ME-EEKAFWMLVIITGKYLPG-VYESDLEGANVDQGV 289
>sp|O94711|GYP2_SCHPO GTPase-activating protein gyp2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp2 PE=3 SV=1
Length = 720
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
+KL++ GIP LR +W + SG+ + Y ++ + + +++I+ DL R
Sbjct: 209 FQKLVQSGIPNNLRADIWETCSGSLFPRWKSKGFYAKNIDSVINNRC-EYSEEIEKDLTR 267
Query: 169 TFPGHPWLDTPDGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAV 228
+ P +P +P G TLRR+L+ YS + +VGYCQ +N V A LLV TEE A+++ +
Sbjct: 268 SLPDYPAYQSPTGINTLRRILLFYSETNKEVGYCQAMNIVLA-ALLVYCTEEQAYFLFSQ 326
Query: 229 LLE 231
L E
Sbjct: 327 LCE 329
>sp|Q96CN4|EVI5L_HUMAN EVI5-like protein OS=Homo sapiens GN=EVI5L PE=1 SV=1
Length = 794
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVP-ESYYNDLTKAVEGKVTPATKQIDHDLP 167
LK+LIRKGIP R VW L A + +P ++ Y++L K +P K I D+
Sbjct: 108 LKELIRKGIPHHFRAIVWQLLCSA----TDMPVKNQYSELLKMS----SPCEKLIRRDIA 159
Query: 168 RTFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWM 225
RT+P H + D G L V+ YS D +VGYCQG ++ LLL+ M EE+AF +
Sbjct: 160 RTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQM-PEEEAFCV 218
Query: 226 LAVLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCP 262
L++ + + + +++ + F+ +L +Q P
Sbjct: 219 FVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLP 255
>sp|Q8C9V1|TB10C_MOUSE Carabin OS=Mus musculus GN=Tbc1d10c PE=2 SV=1
Length = 444
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 18/169 (10%)
Query: 114 RKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQ----IDHDLPRT 169
RKGIP LR + W L GA + P +Y +L A P Q I DL R
Sbjct: 88 RKGIPSALRARCWPLLCGARMCQKNNPGTY-QELAAA------PGDPQWMETIGRDLHRQ 140
Query: 170 FPGHPWLDTPDGHAT--LRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLA 227
FP H +P GH L +VL Y+ + GYCQ VAA+LL+ + EE AFW L
Sbjct: 141 FPLHEMFVSPQGHGQQGLLQVLKAYTLYRPEQGYCQAQGPVAAVLLMHLPPEE-AFWCLV 199
Query: 228 VLLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEEFLDIYV 276
+ E V + Y ++ ++ VF LL +Q PR VY+ + V
Sbjct: 200 QICE-VYLPGYYGPHMEAVQLDAEVFMALLRRQLPR---VYKHLQQVGV 244
>sp|O60447|EVI5_HUMAN Ecotropic viral integration site 5 protein homolog OS=Homo sapiens
GN=EVI5 PE=1 SV=3
Length = 810
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 109 LKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPR 168
+K+L+ KGIP R VW L A +S + Y++L K +P K I D+ R
Sbjct: 156 VKELVHKGIPHHFRAIVWQLLCSA---QSMPIKDQYSELLKMT----SPCEKLIRRDIAR 208
Query: 169 TFPGHPWLDTPD--GHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWML 226
T+P H + D G L V+ YS D +VGYCQG ++ LLL+ M EE+AF +
Sbjct: 209 TYPEHNFFKEKDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQM-PEEEAFCVF 267
Query: 227 AVLLENVLVNDCYTNNLS 244
L+++ + + + +++
Sbjct: 268 VKLMQDYRLRELFKPSMA 285
>sp|P87234|GYP3_SCHPO GTPase-activating protein gyp3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp3 PE=1 SV=1
Length = 635
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 110 KKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRT 169
++ IRKGIPP R WF SG + P+ Y L + K + I+ DL RT
Sbjct: 294 QRFIRKGIPPEYRGNAWFYYSGGYELLQRNPK-LYETLWRCACIKKPSDSDLIERDLYRT 352
Query: 170 FPGHPWLDTPDGHA--------------------TLRRVLVGYSFRDSDVGYCQGLNYVA 209
FP + H+ LRRVL+ ++ + GYCQ LN++A
Sbjct: 353 FPDNVHFRHKSKHSRNSSDASEHSSEEPDVPMISKLRRVLMTFATYLPENGYCQSLNFLA 412
Query: 210 ALLLLVMKTEEDAFWMLAVLLENVLVNDCYTNNLSGCHVEQRV 252
LL M +EE AFWML + L + NL G +++Q V
Sbjct: 413 GFFLLFM-SEEKAFWMLVITCRKYLPK-MHDANLEGANIDQSV 453
>sp|Q92738|US6NL_HUMAN USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3
Length = 828
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 32 ITVKFQDLYGFTVEGNVDDVNVLNEVREKVREQGRVWWALEASKGANWYLQPQIASISEG 91
+ K D +GF E + D NV E R+K E R L+ KG Y
Sbjct: 40 LVYKVTDRFGFLHEEELPDHNVAVE-RQKHLEIERTTKWLKMLKGWEKY----------- 87
Query: 92 IALKSSLKLSSLANAITLKKLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAV 151
N + I KGIP LR +VW L K K Y+ L
Sbjct: 88 ------------KNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKEET-RDLYSKLKHRA 134
Query: 152 EGKVTPATKQIDHDLPRTFPGHPWLDTPDG--HATLRRVLVGYSFRDSDVGYCQGLNYVA 209
G +P +QID D+ RTF H G +L VL YS +++VGYCQG++ +
Sbjct: 135 RG-CSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQIT 193
Query: 210 ALLLLVMKTEEDAFWMLAVLL 230
ALLL+ M EEDAFW L L
Sbjct: 194 ALLLMYM-NEEDAFWALVKLF 213
>sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2
Length = 1298
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 112 LIRKGIPPVLRPKVW------FSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHD 165
L+++G+P R ++W + L K P+ Y +L K ++T I D
Sbjct: 914 LLKEGVPKSRRGEIWQFLALQYRLRHRLPNKQQPPDISYKELLK----QLTAQQHAILVD 969
Query: 166 LPRTFPGHPWLDTP--DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAF 223
L RTFP HP+ G +L +L YS D +VGYCQG+++VA +LLL M +EE AF
Sbjct: 970 LGRTFPTHPYFSVQLGPGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHM-SEEQAF 1028
Query: 224 WMLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLL 257
ML L+ ++ Y ++ ++ LL
Sbjct: 1029 EMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLL 1062
>sp|Q9VYY9|Y1727_DROME TBC1 domain family member CG11727 OS=Drosophila melanogaster
GN=CG11727 PE=1 SV=3
Length = 807
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 111 KLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDLPRTF 170
+L+R+GIP R VW LSGA S + Y + KA + K I D+ RT+
Sbjct: 111 ELVRRGIPHHFRAIVWQQLSGA----SDGDKKQYAEYIKAT----SACEKVIRRDIARTY 162
Query: 171 PGHPWLDTPDG--HATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAV 228
P + DG L V+ YS D +VGYCQG ++ LLL+ M EE+AF +L
Sbjct: 163 PEVEFFKEKDGPGQEALFNVIKAYSLHDREVGYCQGSGFIVGLLLMQM-PEEEAFAVLVQ 221
Query: 229 LLENVLVNDCYTNNLSGCHVEQRVFKDLLVKQCPRYALVYEE 270
+++ + + ++S + ++L+ +Q P + +++
Sbjct: 222 IMQQHRMRHMFKPSMSELGLCMYQLENLVQEQIPDMHIHFQQ 263
>sp|Q8BYJ6|TBCD4_MOUSE TBC1 domain family member 4 OS=Mus musculus GN=Tbc1d4 PE=1 SV=2
Length = 1307
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 113 IRKGIPPVLRPKVW------FSLSGAAKKKSTVPESYYNDLTKAVEGKVTPATKQIDHDL 166
+++G+P R ++W + L K P++ Y +L K ++T I DL
Sbjct: 924 LKEGVPKSRRGEIWQFLALQYRLRHRLPNKHQPPDTSYKELLK----QLTAQQHAILVDL 979
Query: 167 PRTFPGHPWLDTP--DGHATLRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFW 224
RTFP HP+ G +L +L YS D +VGYCQG+++VA +LLL M +EE AF
Sbjct: 980 GRTFPTHPYFSVQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHM-SEEQAFE 1038
Query: 225 MLAVLLENVLVNDCYTNNLSGCHVEQRVFKDLL 257
ML L+ ++ Y ++ ++ LL
Sbjct: 1039 MLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLL 1071
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,933,608
Number of Sequences: 539616
Number of extensions: 4174262
Number of successful extensions: 9731
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 9438
Number of HSP's gapped (non-prelim): 143
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)