Query 023832
Match_columns 276
No_of_seqs 170 out of 1588
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 13:31:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.1E-79 3.7E-84 528.4 13.4 194 76-269 1-194 (194)
2 3osx_A 60 kDa chaperonin; alph 100.0 2.3E-77 7.9E-82 515.2 16.0 191 78-268 10-200 (201)
3 1kp8_A Groel protein; chaperon 100.0 9.2E-72 3.2E-76 551.6 28.0 275 1-275 110-384 (547)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 1.2E-71 4.1E-76 550.3 27.3 274 1-275 110-383 (546)
5 1iok_A Chaperonin 60; chaperon 100.0 6.3E-71 2.2E-75 545.6 22.9 275 1-275 111-385 (545)
6 1we3_A CPN60(groel); chaperoni 100.0 8.6E-70 2.9E-74 537.5 29.5 274 1-275 110-383 (543)
7 1srv_A Protein (groel (HSP60 c 100.0 1.2E-60 4.2E-65 393.2 13.6 145 82-226 1-145 (145)
8 3p9d_C T-complex protein 1 sub 100.0 3.2E-47 1.1E-51 379.1 14.3 245 1-275 116-441 (590)
9 1q3q_A Thermosome alpha subuni 100.0 1.8E-40 6.2E-45 328.5 21.6 203 1-227 119-367 (548)
10 1a6d_A Thermosome (alpha subun 100.0 1.8E-40 6E-45 328.4 21.5 200 1-225 118-362 (545)
11 3aq1_B Thermosome subunit; gro 100.0 1.6E-40 5.4E-45 325.8 20.3 203 1-227 69-318 (500)
12 3p9d_A T-complex protein 1 sub 100.0 2.6E-41 9E-46 335.1 12.9 209 1-228 120-379 (559)
13 1a6d_B Thermosome (beta subuni 100.0 5.5E-40 1.9E-44 324.7 21.4 221 1-245 117-395 (543)
14 3iyg_H T-complex protein 1 sub 100.0 2.1E-39 7.3E-44 318.7 22.6 204 1-225 107-354 (515)
15 3iyg_B T-complex protein 1 sub 100.0 1.7E-38 5.7E-43 312.2 23.7 219 1-245 108-383 (513)
16 3ruv_A Chaperonin, CPN; double 100.0 2.7E-39 9.2E-44 319.8 17.2 204 1-228 115-361 (543)
17 3ko1_A Chaperonin; 9-fold symm 100.0 3.8E-39 1.3E-43 319.3 18.3 203 1-227 126-374 (553)
18 3p9d_D T-complex protein 1 sub 100.0 1.5E-39 5.2E-44 320.6 14.8 193 1-216 115-353 (528)
19 3iyg_E T-complex protein 1 sub 100.0 5E-38 1.7E-42 309.0 19.5 211 1-228 106-357 (515)
20 3iyg_D T-complex protein 1 sub 100.0 1.8E-37 6E-42 305.3 21.5 200 1-225 107-357 (518)
21 3iyg_A T-complex protein 1 sub 100.0 4.2E-37 1.4E-41 303.3 22.0 209 1-228 106-363 (529)
22 3p9d_B T-complex protein 1 sub 100.0 1.5E-38 5E-43 313.6 9.1 200 1-225 115-358 (527)
23 3p9d_G T-complex protein 1 sub 100.0 5.1E-38 1.7E-42 311.1 10.8 222 1-245 120-399 (550)
24 3iyg_Q T-complex protein 1 sub 100.0 2.2E-36 7.4E-41 297.2 20.8 198 1-217 107-338 (512)
25 3p9d_E T-complex protein 1 sub 100.0 2.1E-36 7E-41 300.2 17.3 209 1-227 141-399 (562)
26 3iyg_Z T-complex protein 1 sub 100.0 1E-35 3.5E-40 292.7 18.6 203 1-230 106-362 (517)
27 3iyg_G T-complex protein 1 sub 100.0 1.9E-34 6.5E-39 283.5 19.2 190 1-216 105-341 (515)
28 3p9d_H T-complex protein 1 sub 100.0 7.5E-35 2.6E-39 289.3 14.3 200 1-226 122-374 (568)
29 3p9d_F T-complex protein 1 sub 100.0 5.8E-36 2E-40 296.2 3.0 220 1-244 113-400 (546)
30 1gml_A T-complex protein 1 sub 99.8 3.7E-19 1.3E-23 152.5 13.2 129 76-227 3-172 (178)
31 1ass_A Thermosome; chaperonin, 99.8 3.4E-18 1.1E-22 144.1 11.1 126 80-228 1-153 (159)
32 1g6h_A High-affinity branched- 45.2 19 0.00065 31.0 4.1 41 106-146 170-215 (257)
33 3ggz_E Vacuolar protein-sortin 43.9 14 0.00047 21.7 2.0 18 247-264 12-29 (29)
34 1ji0_A ABC transporter; ATP bi 43.5 23 0.00079 30.1 4.4 40 106-145 156-200 (240)
35 1b0u_A Histidine permease; ABC 42.5 22 0.00075 30.8 4.1 41 105-145 169-214 (262)
36 3tif_A Uncharacterized ABC tra 40.7 21 0.00072 30.3 3.6 41 105-145 161-207 (235)
37 2pcj_A ABC transporter, lipopr 39.6 23 0.00078 29.8 3.6 41 105-145 156-201 (224)
38 3twe_A Alpha4H; unknown functi 39.0 18 0.00062 20.2 1.9 13 251-263 9-21 (27)
39 1sgw_A Putative ABC transporte 38.9 24 0.00082 29.7 3.6 41 105-145 149-194 (214)
40 1vpl_A ABC transporter, ATP-bi 37.4 27 0.00093 30.2 3.8 41 105-145 162-207 (256)
41 2olj_A Amino acid ABC transpor 36.7 26 0.0009 30.5 3.7 41 105-145 175-220 (263)
42 3gfo_A Cobalt import ATP-bindi 36.6 35 0.0012 29.9 4.5 40 106-145 160-205 (275)
43 2yz2_A Putative ABC transporte 36.4 32 0.0011 29.8 4.1 40 106-145 155-199 (266)
44 3ibs_A Conserved hypothetical 36.0 31 0.0011 28.0 3.8 21 173-193 175-195 (218)
45 2ihy_A ABC transporter, ATP-bi 35.4 40 0.0014 29.5 4.6 41 105-145 177-224 (279)
46 3rlf_A Maltose/maltodextrin im 35.0 37 0.0013 31.4 4.6 40 106-145 150-195 (381)
47 3dmp_A Uracil phosphoribosyltr 33.8 87 0.003 26.6 6.4 65 101-166 124-191 (217)
48 2nq2_C Hypothetical ABC transp 33.6 34 0.0012 29.4 3.9 41 105-145 144-190 (253)
49 2d2e_A SUFC protein; ABC-ATPas 33.4 25 0.00087 30.1 3.0 40 106-145 160-204 (250)
50 3swy_A Cyclic nucleotide-gated 32.9 43 0.0015 21.7 3.3 12 252-263 32-43 (46)
51 3n70_A Transport activator; si 32.7 1.6E+02 0.0054 22.2 7.4 73 120-194 10-84 (145)
52 3rag_A Uncharacterized protein 32.3 89 0.0031 27.2 6.3 21 173-193 54-74 (242)
53 1rq8_A Conserved hypothetical 31.6 42 0.0014 25.5 3.5 65 127-193 10-76 (104)
54 3tui_C Methionine import ATP-b 30.9 40 0.0014 31.1 4.0 40 106-145 180-225 (366)
55 2xze_Q Charged multivesicular 30.3 34 0.0012 21.6 2.3 15 250-264 26-40 (40)
56 1vm6_A DHPR, dihydrodipicolina 29.8 81 0.0028 27.2 5.5 114 107-228 53-185 (228)
57 3d31_A Sulfate/molybdate ABC t 28.9 43 0.0015 30.5 3.8 41 105-145 143-189 (348)
58 3v7e_A Ribosome-associated pro 28.4 58 0.002 23.1 3.8 35 132-166 25-59 (82)
59 1oxx_K GLCV, glucose, ABC tran 28.3 46 0.0016 30.3 3.9 40 106-145 157-202 (353)
60 3swf_A CGMP-gated cation chann 27.7 53 0.0018 23.5 3.3 13 252-264 34-46 (74)
61 1f2t_B RAD50 ABC-ATPase; DNA d 27.3 53 0.0018 25.9 3.7 39 106-144 80-123 (148)
62 4a5z_A MITD1, MIT domain-conta 27.2 21 0.00074 29.4 1.3 46 82-134 20-65 (163)
63 1v43_A Sugar-binding transport 26.9 50 0.0017 30.4 3.9 40 106-145 158-203 (372)
64 1jo0_A Hypothetical protein HI 26.9 63 0.0021 24.1 3.8 65 127-193 11-77 (98)
65 1z47_A CYSA, putative ABC-tran 26.9 47 0.0016 30.4 3.7 41 105-145 161-207 (355)
66 1g29_1 MALK, maltose transport 26.6 51 0.0017 30.3 3.9 40 106-145 156-201 (372)
67 2yyz_A Sugar ABC transporter, 26.6 52 0.0018 30.1 3.9 41 105-145 149-195 (359)
68 2onk_A Molybdate/tungstate ABC 26.2 41 0.0014 28.7 3.0 41 105-145 142-188 (240)
69 2zu0_C Probable ATP-dependent 26.1 27 0.00094 30.3 1.9 40 106-145 181-225 (267)
70 2ff7_A Alpha-hemolysin translo 25.9 60 0.002 27.7 4.0 40 105-145 161-205 (247)
71 2it1_A 362AA long hypothetical 25.2 49 0.0017 30.3 3.5 41 105-145 149-195 (362)
72 2ymb_A MITD1, MIT domain-conta 24.7 23 0.0008 31.2 1.2 46 82-134 108-153 (257)
73 1p9l_A Dihydrodipicolinate red 24.6 87 0.003 27.0 4.9 60 111-173 48-107 (245)
74 3fvq_A Fe(3+) IONS import ATP- 24.2 76 0.0026 29.0 4.6 45 105-150 154-204 (359)
75 3o85_A Ribosomal protein L7AE; 23.9 73 0.0025 24.5 3.8 23 220-245 98-120 (122)
76 3czq_A Putative polyphosphate 23.9 1.1E+02 0.0036 27.6 5.4 64 123-186 73-140 (304)
77 4g1u_C Hemin import ATP-bindin 23.7 72 0.0025 27.6 4.2 39 107-145 165-209 (266)
78 2ghi_A Transport protein; mult 23.4 60 0.0021 27.9 3.6 39 106-145 172-215 (260)
79 2lnd_A De novo designed protei 22.5 1.1E+02 0.0038 22.4 4.2 33 118-150 35-67 (112)
80 1shu_X Anthrax toxin receptor 21.3 1.1E+02 0.0039 23.6 4.6 31 160-193 134-164 (182)
No 1
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-79 Score=528.35 Aligned_cols=194 Identities=51% Similarity=0.856 Sum_probs=191.9
Q ss_pred eEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHh
Q 023832 76 ELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILN 155 (276)
Q Consensus 76 ~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n 155 (276)
+++++|||+|||||+||||+||+++|+++|+|||||++|+||+++++|+|+||++.++|+|||||||||++|||++|+.|
T Consensus 1 elevvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvN 80 (194)
T 3m6c_A 1 ELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVN 80 (194)
T ss_dssp CCCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHH
T ss_pred CeEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhh
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCCCCHHHHHHH
Q 023832 156 KLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEER 235 (276)
Q Consensus 156 ~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~g~~~~i~~r 235 (276)
|+||+++|||||||||||+||++|+|||++|||+||++++|++|+++++++||+|++|+|+||+|+|++|+|++++|++|
T Consensus 81 klrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~R 160 (194)
T 3m6c_A 81 AIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANR 160 (194)
T ss_dssp HHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHH
T ss_pred hccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCChhHHHHHHHHHHhhcCCeEEE
Q 023832 236 CEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVL 269 (276)
Q Consensus 236 ~~~l~~~~~~~~s~~~~~~L~eRla~L~ggvavi 269 (276)
|+|||+|++.++|+||||||+||||||+||||||
T Consensus 161 v~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 161 AKHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 9999999999999999999999999999999986
No 2
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=2.3e-77 Score=515.17 Aligned_cols=191 Identities=55% Similarity=0.891 Sum_probs=187.5
Q ss_pred EEEEeEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcc
Q 023832 78 EVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKL 157 (276)
Q Consensus 78 ~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~ 157 (276)
+=.+||+|||||+||||+||+++|+++|+|||||++|+||+++++|+|+||++.++++|||||||||++|||++|+.|++
T Consensus 10 ~~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNkl 89 (201)
T 3osx_A 10 HGSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNM 89 (201)
T ss_dssp --CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHH
T ss_pred cCccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhc
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCCCCHHHHHHHHH
Q 023832 158 RAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCE 237 (276)
Q Consensus 158 ~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~g~~~~i~~r~~ 237 (276)
||+++|||||||||||+||++|+|||++|||+||++++|++|+++++++||+|++|+|+||+|+|++|+|++++|++||+
T Consensus 90 rg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~ 169 (201)
T 3osx_A 90 RGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVT 169 (201)
T ss_dssp HTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHH
T ss_pred cceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHhhcCCeEE
Q 023832 238 QIRSAIENSTSDYDKEKLQERLAKLSGGVAV 268 (276)
Q Consensus 238 ~l~~~~~~~~s~~~~~~L~eRla~L~ggvav 268 (276)
|||+|++.++|+||||||+||||||+|||||
T Consensus 170 qIr~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 170 QIRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 9999999999999999999999999999996
No 3
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=9.2e-72 Score=551.63 Aligned_cols=275 Identities=58% Similarity=0.891 Sum_probs=271.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCChHHHHHHhhhcCCCchhHHHHHHHHHHhcccCccEEEecCCcceeeEEEE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~~~~i~~VA~iSa~~d~~ig~lia~Av~~vg~~G~I~ie~g~~~~~~l~v~ 80 (276)
+||+.|++||++|++.+++.|+++|+|++++++|.+||++|+++++.+|+|+++||.+||++|+|+|++|++++++++++
T Consensus 110 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lv 189 (547)
T 1kp8_A 110 MNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVV 189 (547)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEE
Confidence 59999999999999999999999999999999999999999988999999999999999999999999999999888999
Q ss_pred EeEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhccccc
Q 023832 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (276)
Q Consensus 81 eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~ 160 (276)
+||+|||||+||||+|++++|+++++|||||++|++|+++++|+|+||++.++|+||||++++|+++||++|+.|++||+
T Consensus 190 eG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~ 269 (547)
T 1kp8_A 190 EGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGI 269 (547)
T ss_dssp SCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTS
T ss_pred ecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCCCCHHHHHHHHHHHH
Q 023832 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (276)
Q Consensus 161 ~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~g~~~~i~~r~~~l~ 240 (276)
++|||||+|+||++|+++|+|||++|||+++++++|++++++++++||+|++|+++++.|+++.|.+++++|++|++||+
T Consensus 270 ~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 349 (547)
T 1kp8_A 270 VKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIR 349 (547)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHH
T ss_pred eeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhHHHHHHHHHHhhcCCeEEEEeCccc
Q 023832 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKVCCGF 275 (276)
Q Consensus 241 ~~~~~~~s~~~~~~L~eRla~L~ggvavi~vGg~~ 275 (276)
.+++.++|+||||||+||||||+||+|+|.|||+|
T Consensus 350 ~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~t 384 (547)
T 1kp8_A 350 QQIEEATSDYDREKLQERVAKLAGGVAVIKVGAAT 384 (547)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSS
T ss_pred HHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCc
Confidence 99999999999999999999999999999999987
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.2e-71 Score=550.32 Aligned_cols=274 Identities=51% Similarity=0.829 Sum_probs=270.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCChHHHHHHhhhcCCCchhHHHHHHHHHHhcccCccEEEecCCcceeeEEEE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~~~~i~~VA~iSa~~d~~ig~lia~Av~~vg~~G~I~ie~g~~~~~~l~v~ 80 (276)
.||+.|++||++|++.+++.|+++|+|++++++|.+||++|++ |+.+|+|+++||.+||.+|+|+|++++++.++++++
T Consensus 110 ihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lv 188 (546)
T 3rtk_A 110 ANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELT 188 (546)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEe
Confidence 5999999999999999999999999999999999999999998 999999999999999999999999998888899999
Q ss_pred EeEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhccccc
Q 023832 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (276)
Q Consensus 81 eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~ 160 (276)
+||+|||||+||||+|++++|+++++|||||++|++|+++++|+|+|+++.++|+||||++++|+++||++|+.|+++|.
T Consensus 189 eGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~ 268 (546)
T 3rtk_A 189 EGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGT 268 (546)
T ss_dssp CEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSS
T ss_pred eeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCCCCHHHHHHHHHHHH
Q 023832 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (276)
Q Consensus 161 ~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~g~~~~i~~r~~~l~ 240 (276)
++|+|||+|+||++|+++|+|||++|||+++++++|++++++++++||+|++|+++++.|+++.|.+++++++.|++||+
T Consensus 269 ~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~ 348 (546)
T 3rtk_A 269 FKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIR 348 (546)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHH
T ss_pred eEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhHHHHHHHHHHhhcCCeEEEEeCccc
Q 023832 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKVCCGF 275 (276)
Q Consensus 241 ~~~~~~~s~~~~~~L~eRla~L~ggvavi~vGg~~ 275 (276)
++++.++|+||||||+||||||+||+|+|.|||+|
T Consensus 349 ~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~t 383 (546)
T 3rtk_A 349 QEIENSDSDYDREKLQERLAKLAGGVAVIKAGAAT 383 (546)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCS
T ss_pred HHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 99999999999999999999999999999999987
No 5
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=6.3e-71 Score=545.64 Aligned_cols=275 Identities=61% Similarity=0.935 Sum_probs=228.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCChHHHHHHhhhcCCCchhHHHHHHHHHHhcccCccEEEecCCcceeeEEEE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~~~~i~~VA~iSa~~d~~ig~lia~Av~~vg~~G~I~ie~g~~~~~~l~v~ 80 (276)
+||+.|++||++|++.+++.|+++|+|++++++|.+||++|+++++.+|+|+++||.+|+++|+|+|++|++++|+++++
T Consensus 111 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv 190 (545)
T 1iok_A 111 MNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVV 190 (545)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEE
Confidence 59999999999999999999999999999999999999999988999999999999999999999999999999888999
Q ss_pred EeEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhccccc
Q 023832 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (276)
Q Consensus 81 eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~ 160 (276)
+||+|||||+||||+|++++|+++++|||||++|++|+++++|+|+||++.++|+||||++++|+++||++|+.|++||+
T Consensus 191 eG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~ 270 (545)
T 1iok_A 191 EGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGG 270 (545)
T ss_dssp CCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC---------------
T ss_pred ecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCCCCHHHHHHHHHHHH
Q 023832 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (276)
Q Consensus 161 ~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~g~~~~i~~r~~~l~ 240 (276)
++|||||+|+||++|+++|+|||++|||+++++++|++++++++++||+|++|++++++|+++.|.+++++|++|++||+
T Consensus 271 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 350 (545)
T 1iok_A 271 LKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIR 350 (545)
T ss_dssp --CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHH
T ss_pred ceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhHHHHHHHHHHhhcCCeEEEEeCccc
Q 023832 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKVCCGF 275 (276)
Q Consensus 241 ~~~~~~~s~~~~~~L~eRla~L~ggvavi~vGg~~ 275 (276)
.|++.++|+||||||+||||||+||+|+|.|||+|
T Consensus 351 ~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~t 385 (545)
T 1iok_A 351 QQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMT 385 (545)
T ss_dssp HHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSS
T ss_pred HHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCC
Confidence 99999999999999999999999999999999987
No 6
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=8.6e-70 Score=537.47 Aligned_cols=274 Identities=51% Similarity=0.828 Sum_probs=270.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCChHHHHHHhhhcCCCchhHHHHHHHHHHhcccCccEEEecCCcceeeEEEE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDGKTLYNELEVV 80 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~~~~i~~VA~iSa~~d~~ig~lia~Av~~vg~~G~I~ie~g~~~~~~l~v~ 80 (276)
.||+.|++||++|++.+++.|+++|+|++++++|.+||++|++ ++.+|+|++|||.+||++|+|+|++|++++|+++++
T Consensus 110 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv 188 (543)
T 1we3_A 110 ANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFV 188 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEE
Confidence 5999999999999999999999999999999999999999998 999999999999999999999999999999888999
Q ss_pred EeEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhccccc
Q 023832 81 EGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAG 160 (276)
Q Consensus 81 eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~ 160 (276)
+||+|||||+||||+|++++|+++++|||||++|++|+++++|+|+||++.++|+||||++++|+++||++|+.|+++|+
T Consensus 189 ~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~ 268 (543)
T 1we3_A 189 EGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGT 268 (543)
T ss_dssp CSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTS
T ss_pred cCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCCCCHHHHHHHHHHHH
Q 023832 161 IKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGAGDKKSIEERCEQIR 240 (276)
Q Consensus 161 ~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~g~~~~i~~r~~~l~ 240 (276)
++|||||+|+||++|+++|+|||++|||+++++++|++++++++++||+|++|+++++.|+++.|.++++++++|++||+
T Consensus 269 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~ 348 (543)
T 1we3_A 269 LSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIK 348 (543)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHH
T ss_pred eeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhHHHHHHHHHHhhcCCeEEEEeCccc
Q 023832 241 SAIENSTSDYDKEKLQERLAKLSGGVAVLKVCCGF 275 (276)
Q Consensus 241 ~~~~~~~s~~~~~~L~eRla~L~ggvavi~vGg~~ 275 (276)
.+++.++|+||||+|+||||||+|++|+|.|||+|
T Consensus 349 ~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~t 383 (543)
T 1we3_A 349 KELETTDSEYAREKLQERLAKLAGGVAVIRVGAAT 383 (543)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred HHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCC
Confidence 99999999999999999999999999999999987
No 7
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1.2e-60 Score=393.19 Aligned_cols=145 Identities=52% Similarity=0.891 Sum_probs=143.5
Q ss_pred eEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccc
Q 023832 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGI 161 (276)
Q Consensus 82 G~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~ 161 (276)
||+|||||+||||+||+++|+++|+|||||++|+|||++++++|+||++.++|+|||||||||++|||++|+.||+||++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEEEeCCcEEEEcCC
Q 023832 162 KVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVTISKDDTVILDGA 226 (276)
Q Consensus 162 ~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~v~~~~T~i~~g~ 226 (276)
+|||||||||||+||++|+|||++|||+||++++|++|+++++++||+|++|+|+||+|+|++|+
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G~ 145 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGK 145 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEEC
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999873
No 8
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3.2e-47 Score=379.11 Aligned_cols=245 Identities=18% Similarity=0.272 Sum_probs=189.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC--hHHHHHHhhhcC------CCchhHHHHHHHHHHhcccCccE-------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST--SEEIAQVGTISA------NGEREIGELIAKAMEKVGKEGVI------- 65 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~--~~~i~~VA~iSa------~~d~~ig~lia~Av~~vg~~G~I------- 65 (276)
.||+.|++||++|++.+++.|+++|+|++. +++|.+||++|. ++++.||+|+++||.+|+++|.+
T Consensus 116 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~ 195 (590)
T 3p9d_C 116 IHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPN 195 (590)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC---------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccc
Confidence 599999999999999999999999999984 689999998773 35789999999999999988754
Q ss_pred ---------EEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc-------------CCcHH
Q 023832 66 ---------TIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLT 121 (276)
Q Consensus 66 ---------~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~-------------i~~~~ 121 (276)
+|+ .|++++ ++++++||+||+|+.+| +|+++++|||||++|++ |++++
T Consensus 196 ~~vDl~~~I~I~ki~Ggs~~-ds~lv~Gmvfdk~~~~~-------~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~ 267 (590)
T 3p9d_C 196 FEIDIKRYVRVEKIPGGDVL-DSRVLKGVLLNKDVVHP-------KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEE 267 (590)
T ss_dssp --CCCSSSSCEEEESSCCGG-GCBCCSSEEECCCCSCT-------TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTT
T ss_pred cccchhhceEEEEecCCCcc-cceeeeEEEEecccCCC-------CCcceeeeeEEEEEcccccccccccCceEEeCCHH
Confidence 443 488887 48999999999997776 58899999999999993 56777
Q ss_pred HHHHHH-----------HHHHHhCCCeEEEecC-ccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCe
Q 023832 122 AVVRVL-----------ELALKRQRPLLIVAED-VESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGD 189 (276)
Q Consensus 122 ~i~p~l-----------e~i~~~~~pLlIiae~-i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~ 189 (276)
++.|++ +++.+.| |+|||+++ |+++|+++|+.|++ ++||++|+++|+|||++|||+
T Consensus 268 ~l~~il~~E~~~l~~~vekI~~~g-~~vII~e~~I~d~Al~~L~k~~I-----------~av~~~~k~~le~ia~~TGa~ 335 (590)
T 3p9d_C 268 DWNRILQIEEEQVQLMCEQILAVR-PTLVITEKGVSDLAQHYLLKGGC-----------SVLRRVKKSDNNRIARVTGAT 335 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC-CSEECCSSCCCTHHHHHHHHTTC-----------CCCCCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcEEEecCCcCHHHHHHHHhccc-----------eeeccCCHHHHHHHHHHhCCc
Confidence 888776 6888887 99999996 99999999999843 567999999999999999999
Q ss_pred EEecCCCccccccCcccCce-eeEEE---EeCCcEEEEcCCCCHHH--------------------------HHHHHHHH
Q 023832 190 LITEELGMDLEKVNLDMLGT-CKKVT---ISKDDTVILDGAGDKKS--------------------------IEERCEQI 239 (276)
Q Consensus 190 vi~~~~g~~l~~~~~~~LG~-a~~v~---v~~~~T~i~~g~g~~~~--------------------------i~~r~~~l 239 (276)
++++ ++++++++||+ |++|+ ++++.|+++.|.++++. |++|++||
T Consensus 336 iis~-----l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i 410 (590)
T 3p9d_C 336 IVNR-----VEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKI 410 (590)
T ss_dssp CCSC-----STTCCTTSCBCCCSEEECCEETTEECEEECC----------------------------------------
T ss_pred eeec-----ccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHH
Confidence 9998 99999999999 99997 68999999999988888 99999999
Q ss_pred HHHHHhcCChhHHHHHHHHHHhhcCCeEEEEeCccc
Q 023832 240 RSAIENSTSDYDKEKLQERLAKLSGGVAVLKVCCGF 275 (276)
Q Consensus 240 ~~~~~~~~s~~~~~~L~eRla~L~ggvavi~vGg~~ 275 (276)
+.+++.++|+||++ ++||+||||+|.|||+|
T Consensus 411 ~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~t 441 (590)
T 3p9d_C 411 SSSGALGSGHHHHH-----HHHGSGKACTIMLRGGS 441 (590)
T ss_dssp ----------------------CCCSCCCEEEECSS
T ss_pred HHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCC
Confidence 99999999999976 48999999999999987
No 9
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.8e-40 Score=328.50 Aligned_cols=203 Identities=18% Similarity=0.325 Sum_probs=184.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC--hHHHHHHhhhc------CCCchhHHHHHHHHHHhcccC--c-------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST--SEEIAQVGTIS------ANGEREIGELIAKAMEKVGKE--G------- 63 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~--~~~i~~VA~iS------a~~d~~ig~lia~Av~~vg~~--G------- 63 (276)
.||+.|++||++|++.+++.|+++|+|++. +++|.+||++| +++++.|++|+++||.+|+++ |
T Consensus 119 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~ 198 (548)
T 1q3q_A 119 IHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLD 198 (548)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCC
Confidence 599999999999999999999999999974 79999999955 457899999999999999986 5
Q ss_pred cEEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc-------------CCcHHHH-----
Q 023832 64 VITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV----- 123 (276)
Q Consensus 64 ~I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~-------------i~~~~~i----- 123 (276)
+|+|+ +|++++ ++++++||.||+||.|||| +.+++|||||++|++ |++++++
T Consensus 199 ~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 270 (548)
T 1q3q_A 199 NIKFEKKAGEGVE-ESELVRGVVIDKEVVHPRM-------PKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLE 270 (548)
T ss_dssp GEEEEEEEBSCGG-GCEEESSEEESCCCSSTTS-------CSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHH
T ss_pred eEEEEEecCCCcc-ceEEEeeEEEeccCCCCCC-------cceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHH
Confidence 89998 899998 4799999999999999997 357999999999999 8888886
Q ss_pred ------HHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCc
Q 023832 124 ------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (276)
Q Consensus 124 ------~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~ 197 (276)
.|+|+++.++|+||||++++|+++||++|+.|+ ++|| +++|+++|+|||.+|||+++++
T Consensus 271 ~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~ii~~---- 335 (548)
T 1q3q_A 271 QEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAV-----RRVKKSDMEKLAKATGAKIVTN---- 335 (548)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBSS----
T ss_pred HHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEE-----ccCCHHHHHHHHHHhCCeEecc----
Confidence 999999999999999999999999999999995 5688 7999999999999999999998
Q ss_pred cccccCcccCceeeEEEEe---CCcEEEEcCCC
Q 023832 198 DLEKVNLDMLGTCKKVTIS---KDDTVILDGAG 227 (276)
Q Consensus 198 ~l~~~~~~~LG~a~~v~v~---~~~T~i~~g~g 227 (276)
++++++++||+|++|++. +++++++.|.+
T Consensus 336 -l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 367 (548)
T 1q3q_A 336 -VKDLTPEDLGYAEVVEERKLAGENMIFVEGCK 367 (548)
T ss_dssp -GGGCCGGGCEEESEEEEEEETTEEEEEEECCS
T ss_pred -cccCCHHHCCCceEEEEEEecCceEEEEecCC
Confidence 999999999999999976 66666666544
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.8e-40 Score=328.41 Aligned_cols=200 Identities=17% Similarity=0.316 Sum_probs=182.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC-ChHHHHHHhhhc------CCCchhHHHHHHHHHHhcccC---------cc
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-TSEEIAQVGTIS------ANGEREIGELIAKAMEKVGKE---------GV 64 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~-~~~~i~~VA~iS------a~~d~~ig~lia~Av~~vg~~---------G~ 64 (276)
.||+.|++||++|++.+++.|+++|+| + ++++|.+||++| +++++.||+|++|||.+|+++ ++
T Consensus 118 ihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~ 196 (545)
T 1a6d_A 118 VHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTAN 196 (545)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccce
Confidence 599999999999999999999999999 8 789999999955 567899999999999999976 48
Q ss_pred EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc-------------CCcHHHH------
Q 023832 65 ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV------ 123 (276)
Q Consensus 65 I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~-------------i~~~~~i------ 123 (276)
|+|+ +|++++ ++++++||+|||||.|||| +.+++|||||++|++ |++++++
T Consensus 197 I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~ 268 (545)
T 1a6d_A 197 IKVDKKNGGSVN-DTQFISGIVIDKEKVHSKM-------PDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQ 268 (545)
T ss_dssp EEEEECCCSCST-TCEEESEEEESCCCSCTTS-------CSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHH
T ss_pred EEEEEecCCCce-eeEEEeeEEEeccCCCCCC-------cceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHH
Confidence 9998 899998 4899999999999999997 457899999999999 7888775
Q ss_pred -----HHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCcc
Q 023832 124 -----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD 198 (276)
Q Consensus 124 -----~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~ 198 (276)
.|+|+++.++|+||||++++|+++||++|+.|+ ++|| +++|+++|+|||++|||+++++
T Consensus 269 E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~iis~----- 332 (545)
T 1a6d_A 269 ETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAV-----RRVKKSDMEKLAKATGAKIVTD----- 332 (545)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEE-----CSCCHHHHHHHHHHHCCCEESS-----
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEe-----ccCCHHHHHHHHHHhCCeeecc-----
Confidence 999999999999999999999999999999995 5688 7999999999999999999998
Q ss_pred ccccCcccCceeeEEEEe---CCcEEEEcC
Q 023832 199 LEKVNLDMLGTCKKVTIS---KDDTVILDG 225 (276)
Q Consensus 199 l~~~~~~~LG~a~~v~v~---~~~T~i~~g 225 (276)
++++++++||+|++|++. +++++++.|
T Consensus 333 l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 362 (545)
T 1a6d_A 333 LDDLTPSVLGEAETVEERKIGDDRMTFVMG 362 (545)
T ss_dssp GGGCCGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred cccCCHHHCCCceEEEEEEecCceEEEEec
Confidence 999999999999999975 455555554
No 11
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.6e-40 Score=325.75 Aligned_cols=203 Identities=16% Similarity=0.277 Sum_probs=178.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC--hHHHHHHhhhc------CCCchhHHHHHHHHHHhcccC--cc------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST--SEEIAQVGTIS------ANGEREIGELIAKAMEKVGKE--GV------ 64 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~--~~~i~~VA~iS------a~~d~~ig~lia~Av~~vg~~--G~------ 64 (276)
.||+.|++||++|++.+++.|+++|+|++. +++|.+||++| +++++.+|+|+++||.+|+++ |.
T Consensus 69 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~ 148 (500)
T 3aq1_B 69 VHSTIISEGYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVL 148 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCcccccc
Confidence 599999999999999999999999999974 79999999966 557899999999999999976 64
Q ss_pred --EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc-------------CCcHHHH----
Q 023832 65 --ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV---- 123 (276)
Q Consensus 65 --I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~-------------i~~~~~i---- 123 (276)
|+|+ +|++++ ++++++||.|||||.|||| +.+++|||||++|++ |++++++
T Consensus 149 ~~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~ 220 (500)
T 3aq1_B 149 ENIKIEKRAGGSID-DSELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFL 220 (500)
T ss_dssp HHEEEEEEESSCGG-GCEEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC---------------------
T ss_pred ccEEEEEecCCCcc-ceEEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHH
Confidence 7887 899997 6999999999999999986 568999999999999 7788775
Q ss_pred -------HHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCC
Q 023832 124 -------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELG 196 (276)
Q Consensus 124 -------~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g 196 (276)
.|+|+++.++|+||||++++|+++||++|+.|+ ++|| +++|+++|+|||.+|||+++++
T Consensus 221 ~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~iis~--- 286 (500)
T 3aq1_B 221 DQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAV-----RRVKKSDLKRLSKVTGATIIQD--- 286 (500)
T ss_dssp ----CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBSC---
T ss_pred HHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEE-----EeCCHHHHHHHHHHhCCeEecc---
Confidence 999999999999999999999999999999996 5688 7999999999999999999998
Q ss_pred ccccccCcccCceeeEEEEe---CCcEEEEcCCC
Q 023832 197 MDLEKVNLDMLGTCKKVTIS---KDDTVILDGAG 227 (276)
Q Consensus 197 ~~l~~~~~~~LG~a~~v~v~---~~~T~i~~g~g 227 (276)
++++++++||+|++|++. +++++++.|.+
T Consensus 287 --l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~ 318 (500)
T 3aq1_B 287 --LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQ 318 (500)
T ss_dssp --TTCCCSTTCEEEEEEEEEECSSSEEEEEEEET
T ss_pred --cccCCHhHCCCceEEEEEEecCeEEEEEECCC
Confidence 999999999999999976 66666666533
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.6e-41 Score=335.14 Aligned_cols=209 Identities=15% Similarity=0.299 Sum_probs=185.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHh-cCcccCC--hHHHHHHhhhcCCC------chhHHHHHHHHHHhccc-----Ccc--
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKS-RARMIST--SEEIAQVGTISANG------EREIGELIAKAMEKVGK-----EGV-- 64 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~-~s~~v~~--~~~i~~VA~iSa~~------d~~ig~lia~Av~~vg~-----~G~-- 64 (276)
.||+.|++||++|++.+++.|++ +|+|++. +++|.+||++|+++ ++.||+|+++||.+|++ +|+
T Consensus 120 ihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~ 199 (559)
T 3p9d_A 120 IHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYP 199 (559)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccc
Confidence 59999999999999999999999 9999985 78999999999864 78999999999999994 366
Q ss_pred ---EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeec--CceEEEecccC-------------CcHHH--
Q 023832 65 ---ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELE--DPLILVHEKKI-------------SNLTA-- 122 (276)
Q Consensus 65 ---I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~--~p~Ill~d~~i-------------~~~~~-- 122 (276)
|+|+ .|++++ ++++++||+||+||.|||| +.+++ |||||++|++| +++++
T Consensus 200 l~~I~I~k~~Ggs~~-ds~lv~G~v~dk~~~~~~m-------~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~ 271 (559)
T 3p9d_A 200 VKAVNVLKAHGKSAT-ESLLVPGYALNCTVASQAM-------PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLE 271 (559)
T ss_dssp TTCCCEEEEESSCSS-CCBCCSEECCCCCCSSTTS-------CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHH
T ss_pred hhHeEEEEecCCCcc-ceeEeccEEEeecccCCCc-------ceeeccCCceEEEEeccccccccccCceEEeCCHHHHH
Confidence 4554 399998 4999999999999999985 46788 99999999987 45544
Q ss_pred ---------HHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEec
Q 023832 123 ---------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 123 ---------i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~ 193 (276)
+.|+|+++.++|+||||++++|+++||++|+.|++ +|| ++.|+.+|+|||.+|||+++++
T Consensus 272 ~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------~av-----~~~~k~~le~ia~~TGa~iis~ 340 (559)
T 3p9d_A 272 QIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------MGV-----RRCKKEDLRRIARATGATLVSS 340 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------EEE-----SSCCHHHHHHHHHHSSCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------ceE-----ccCCHHHHHHHHHHhCCEEEec
Confidence 89999999999999999999999999999999965 466 7999999999999999999999
Q ss_pred CCCccc-cccCcccCceeeEEE---EeCCcEEEEcCCCC
Q 023832 194 ELGMDL-EKVNLDMLGTCKKVT---ISKDDTVILDGAGD 228 (276)
Q Consensus 194 ~~g~~l-~~~~~~~LG~a~~v~---v~~~~T~i~~g~g~ 228 (276)
..|+++ +++++++||+|++|+ ++++.++++.|.++
T Consensus 341 ~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~ 379 (559)
T 3p9d_A 341 MSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK 379 (559)
T ss_dssp SCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS
T ss_pred cccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC
Confidence 888887 899999999999999 57777777766443
No 13
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=5.5e-40 Score=324.72 Aligned_cols=221 Identities=16% Similarity=0.292 Sum_probs=191.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC--hHHHHHHhhhc------CCCchhHHHHHHHHHHhcccC--cc------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST--SEEIAQVGTIS------ANGEREIGELIAKAMEKVGKE--GV------ 64 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~--~~~i~~VA~iS------a~~d~~ig~lia~Av~~vg~~--G~------ 64 (276)
.||+.|++||++|++.+++.|+++|+|++. +++|.+||++| +++++.+|+|+++||.+|+++ |.
T Consensus 117 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~ 196 (543)
T 1a6d_B 117 VHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFD 196 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccc
Confidence 599999999999999999999999999985 79999999955 567899999999999999987 74
Q ss_pred -EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc-------------CCcHHHH-----
Q 023832 65 -ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAV----- 123 (276)
Q Consensus 65 -I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~-------------i~~~~~i----- 123 (276)
|+|+ +|++++ ++++++||.|||||.|||| +.+++|||||++|++ |++++++
T Consensus 197 ~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~ 268 (543)
T 1a6d_B 197 NIQVVKKQGGAID-DTQLINGIIVDKEKVHPGM-------PDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLA 268 (543)
T ss_dssp GEEEEEEESSCGG-GCEEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHH
T ss_pred eEEEEEecCCCcc-ceeEEccEEEecCCCCCCC-------cceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHH
Confidence 9998 899998 4899999999999999996 457899999999999 8888875
Q ss_pred ------HHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCc
Q 023832 124 ------VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (276)
Q Consensus 124 ------~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~ 197 (276)
.|+|+++.++|+||||++++|+++||++|+.|+ ++|| ++.|+++|+|||.+|||+++++
T Consensus 269 ~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~v~k~~le~ia~~tGa~iis~---- 333 (543)
T 1a6d_B 269 QEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAV-----RRVKKSDMDKLAKATGASIVST---- 333 (543)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHTCCEESC----
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEe-----ccCCHHHHHHHHHHhCCceecc----
Confidence 999999999999999999999999999999995 5688 7999999999999999999998
Q ss_pred cccccCcccCceeeEEEEe---CCcEEEEcCC------------CCHHHHHHHHHHHHHHHHh
Q 023832 198 DLEKVNLDMLGTCKKVTIS---KDDTVILDGA------------GDKKSIEERCEQIRSAIEN 245 (276)
Q Consensus 198 ~l~~~~~~~LG~a~~v~v~---~~~T~i~~g~------------g~~~~i~~r~~~l~~~~~~ 245 (276)
++++++++||+|++|++. +++++++.|. ++...++++-+.+...+..
T Consensus 334 -l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~ 395 (543)
T 1a6d_B 334 -IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHV 395 (543)
T ss_dssp -GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred -cccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 4455554442 2344555555555554433
No 14
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-39 Score=318.71 Aligned_cols=204 Identities=14% Similarity=0.240 Sum_probs=179.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC--C----hHHHHHHhhhcC------CCchhHHHHHHHHHHhcccC---ccE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--T----SEEIAQVGTISA------NGEREIGELIAKAMEKVGKE---GVI 65 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~--~----~~~i~~VA~iSa------~~d~~ig~lia~Av~~vg~~---G~I 65 (276)
.||+.|++||++|++.+++.|+++|+|++ + ++.|.+||++|. ++++.||+|+++||.+|+.+ |+|
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I 186 (515)
T 3iyg_H 107 LHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMI 186 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceE
Confidence 59999999999999999999999999995 6 567799999874 36789999999999999987 899
Q ss_pred EEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecc-------------cCCcHHHH-------
Q 023832 66 TIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTAV------- 123 (276)
Q Consensus 66 ~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~-------------~i~~~~~i------- 123 (276)
+|+ .|++++ ++++++||+|||||.||||+++|+ +++|||||++|+ +|++++++
T Consensus 187 ~V~k~~Gg~~~-ds~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E 261 (515)
T 3iyg_H 187 GIKKVQGGALE-ESQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAE 261 (515)
T ss_pred EEEecCCCCcc-ceEEEeeeEEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHH
Confidence 997 476666 699999999999999999997766 799999999999 57888776
Q ss_pred ----HHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccc
Q 023832 124 ----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (276)
Q Consensus 124 ----~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l 199 (276)
.|+|+++.+.|+||||++++|++.|+++|..+++ ..+++.++++|+|||.+|||+++++ +
T Consensus 262 ~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI-----------~~v~~~~k~~leria~~tGa~ii~~-----l 325 (515)
T 3iyg_H 262 WNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDM-----------FCAGRVPEEDLKRTMMACGGSIQTS-----V 325 (515)
T ss_pred HHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCC-----------cccccccHHHHHHHHHHhCCEEeec-----c
Confidence 7779999999999999999999999999976644 2448999999999999999999998 9
Q ss_pred cccCcccCceeeEEEEe---CCcEEEEcC
Q 023832 200 EKVNLDMLGTCKKVTIS---KDDTVILDG 225 (276)
Q Consensus 200 ~~~~~~~LG~a~~v~v~---~~~T~i~~g 225 (276)
+++++++||+|++|++. +++++++.|
T Consensus 326 ~~~~~~~LG~a~~v~~~~ig~~~~~~i~g 354 (515)
T 3iyg_H 326 NALSSDVLGRCQVFEETQIGGERYNFFTG 354 (515)
T ss_pred ccCCHHHCCcccEEEEEEEcCeEEEEEec
Confidence 99999999999999966 355555544
No 15
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.7e-38 Score=312.24 Aligned_cols=219 Identities=20% Similarity=0.289 Sum_probs=185.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC-----ChHHHHHHhhhcC------CCchhHHHHHHHHHHhcccC---ccEE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-----TSEEIAQVGTISA------NGEREIGELIAKAMEKVGKE---GVIT 66 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~-----~~~~i~~VA~iSa------~~d~~ig~lia~Av~~vg~~---G~I~ 66 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|. ++++.||+|+++||.+|+++ ++|+
T Consensus 108 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~ 187 (513)
T 3iyg_B 108 IHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIH 187 (513)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEE
Confidence 59999999999999999999999999997 5789999998663 36789999999999999998 9999
Q ss_pred Ee--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecc--------------cCCcHHHHHH-----
Q 023832 67 IH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK--------------KISNLTAVVR----- 125 (276)
Q Consensus 67 ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~--------------~i~~~~~i~p----- 125 (276)
|+ .|++++ ++++++||+||+||.|| |+.+++|||||++|+ +|++++++.|
T Consensus 188 V~ki~gg~~~-ds~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E 258 (513)
T 3iyg_B 188 VIKKLGGSLA-DSYLDEGFLLDKKIGVN--------QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAE 258 (513)
T ss_pred EEEeCCCCcc-ceeEEeeEEEeccccCC--------CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHH
Confidence 97 477776 58999999999999987 778999999999999 5788888766
Q ss_pred ------HHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccc
Q 023832 126 ------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (276)
Q Consensus 126 ------~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l 199 (276)
+|+++.++|+||||++++|+++|+++|..+ +++|||.|+| .+|+|||.+|||+++++ +
T Consensus 259 ~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l 322 (513)
T 3iyg_B 259 KEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHADF-----VGVERLALVTGGEIAST-----F 322 (513)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecCCH-----HHHHHHHHHhCCEEecc-----c
Confidence 799999999999999999999999999986 5679988885 57999999999999998 9
Q ss_pred cccCcccCceeeEEE---EeCCc-------------EEEEcCCCCHHHHHHHHHHHHHHHHh
Q 023832 200 EKVNLDMLGTCKKVT---ISKDD-------------TVILDGAGDKKSIEERCEQIRSAIEN 245 (276)
Q Consensus 200 ~~~~~~~LG~a~~v~---v~~~~-------------T~i~~g~g~~~~i~~r~~~l~~~~~~ 245 (276)
+++++++||+|++|+ +++++ |++++| +++..++++-+.+...+..
T Consensus 323 ~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG-~t~~~l~E~kr~l~DAl~~ 383 (513)
T 3iyg_B 323 DHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRG-ATQQILDEAERSLHDALCV 383 (513)
T ss_pred ccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecC-CCHHHHHHHHHHHHHHHHH
Confidence 999999999999998 44444 444444 3344455555555554433
No 16
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.7e-39 Score=319.81 Aligned_cols=204 Identities=18% Similarity=0.289 Sum_probs=182.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC--ChHHHHHHhhhcCC------CchhHHHHHHHHHHhcccC-cc-----EE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISAN------GEREIGELIAKAMEKVGKE-GV-----IT 66 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~--~~~~i~~VA~iSa~------~d~~ig~lia~Av~~vg~~-G~-----I~ 66 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|++ +++.||+|+++||.+|+++ |. |+
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~ 194 (543)
T 3ruv_A 115 VHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEE
Confidence 59999999999999999999999999998 78999999999975 4789999999999999998 86 99
Q ss_pred Ee--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecc-------------cCCcHHH---------
Q 023832 67 IH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTA--------- 122 (276)
Q Consensus 67 ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~-------------~i~~~~~--------- 122 (276)
|+ .|++++ ++++++||+|||||+|||| +.+++|||||++|+ +|+++++
T Consensus 195 V~k~~Gg~~~-ds~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~ 266 (543)
T 3ruv_A 195 IEKKSGASID-DTELIKGVLVDKERVSAQM-------PKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEE 266 (543)
T ss_dssp EEEEECSCGG-GCEEESSEEESCCCSCTTS-------CSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHH
T ss_pred EEEcCCCCcc-cceeecceEEeccccCccc-------cccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHH
Confidence 97 677776 6999999999999999985 67899999999999 4677776
Q ss_pred --HHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCcccc
Q 023832 123 --VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLE 200 (276)
Q Consensus 123 --i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~ 200 (276)
+.|+++++.++|+||||++++|+++|+++|+.+++ ++| ++.|+++|+|||.+|||+++++ ++
T Consensus 267 ~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI------~~v-----~~v~k~~le~ia~~tGa~iis~-----l~ 330 (543)
T 3ruv_A 267 KMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGI------VAA-----RRVKKSDMEKLAKATGANVIAA-----IA 330 (543)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTC------EEE-----CSCCHHHHHHHHHHHCCCEESC-----GG
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCc------EEE-----eeCCHHHHHHHHHHhCCceecc-----cc
Confidence 77889999999999999999999999999997643 466 5789999999999999999998 99
Q ss_pred ccCcccCceeeEEEEe---CCcEEEEcCCCC
Q 023832 201 KVNLDMLGTCKKVTIS---KDDTVILDGAGD 228 (276)
Q Consensus 201 ~~~~~~LG~a~~v~v~---~~~T~i~~g~g~ 228 (276)
++++++||+|++|++. ++.++++.|.++
T Consensus 331 ~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~ 361 (543)
T 3ruv_A 331 ALSAQDLGDAGLVEERKISGDSMIFVEECKH 361 (543)
T ss_dssp GCCGGGCEEEEEEEEEEETTEEEEEEECCSS
T ss_pred cCCHHHCCcccEEEEEEeCCceEEEEECCCC
Confidence 9999999999999976 666666666443
No 17
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3.8e-39 Score=319.28 Aligned_cols=203 Identities=19% Similarity=0.347 Sum_probs=181.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC--ChHHHHHHhhhcCCC------chhHHHHHHHHHHhcccC--cc------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE--GV------ 64 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~--~~~~i~~VA~iSa~~------d~~ig~lia~Av~~vg~~--G~------ 64 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|+++ ++.||+|++|||.+|+++ |+
T Consensus 126 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~ 205 (553)
T 3ko1_A 126 VHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLD 205 (553)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGG
T ss_pred CCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEech
Confidence 59999999999999999999999999998 789999999999753 789999999999999986 87
Q ss_pred -EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecc-------------cCCcHHH------
Q 023832 65 -ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTA------ 122 (276)
Q Consensus 65 -I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~-------------~i~~~~~------ 122 (276)
|+|+ .|+++. ++++++||+|||||.|||| +.+++|||||++|+ +|+++++
T Consensus 206 ~I~I~k~~Gg~~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~ 277 (553)
T 3ko1_A 206 NIQIVKKAGGSIN-DTQLVYGIVVDKEVVHPGM-------PKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLD 277 (553)
T ss_dssp GEEEEECCCSCGG-GCEEESEEEECSCBSCTTS-------CSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHH
T ss_pred hHHHHHHhCCccc-cceeeEEEEecccccCCCC-------ccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHH
Confidence 9997 577776 6999999999999999985 56899999999999 5788877
Q ss_pred -----HHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCc
Q 023832 123 -----VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGM 197 (276)
Q Consensus 123 -----i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~ 197 (276)
+.|+|+++.++|+||||++++|+++|+++|+.+++ .+| ++.++++|+|||.+|||+++++
T Consensus 278 ~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI------~~v-----~~v~k~~leria~~tGa~ivs~---- 342 (553)
T 3ko1_A 278 EEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGV------LAV-----RRAKKSDLEKLARATGGRVVSN---- 342 (553)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTC------EEE-----CCCCHHHHHHHHTTTTCCEESC----
T ss_pred HHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcch------hhh-----hhhhhhhHHHHHHhhCCeeecc----
Confidence 67889999999999999999999999999997754 366 5789999999999999999998
Q ss_pred cccccCcccCceeeEEEEe---CCcEEEEcCCC
Q 023832 198 DLEKVNLDMLGTCKKVTIS---KDDTVILDGAG 227 (276)
Q Consensus 198 ~l~~~~~~~LG~a~~v~v~---~~~T~i~~g~g 227 (276)
++++++++||+|++|++. ++.++++.|.+
T Consensus 343 -l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~ 374 (553)
T 3ko1_A 343 -IDEISEQDLGYASLIEERKVGEDKMVFVEGAK 374 (553)
T ss_dssp -GGGCCSSSSEECSEEECCCCSSSCCEEEESCS
T ss_pred -cccCChhhcchHHHHHHhhcCcceEEEeccCC
Confidence 999999999999999975 55555555543
No 18
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.5e-39 Score=320.62 Aligned_cols=193 Identities=16% Similarity=0.198 Sum_probs=176.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC--ChHHHHHHhhhcCCC------chhHHHHHHHHHHhccc--CccEEEec-
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANG------EREIGELIAKAMEKVGK--EGVITIHD- 69 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~--~~~~i~~VA~iSa~~------d~~ig~lia~Av~~vg~--~G~I~ie~- 69 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|+++ ++.||+|++|||.+||+ +|+|+++.
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I 194 (528)
T 3p9d_D 115 IHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDI 194 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGS
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEE
Confidence 59999999999999999999999999998 789999999999763 68999999999999998 57776654
Q ss_pred ------CCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccCC-------------cHH---------
Q 023832 70 ------GKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLT--------- 121 (276)
Q Consensus 70 ------g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~-------------~~~--------- 121 (276)
|++++ ++++++||.||+||.|||| |+.+++||+||++|++|+ +++
T Consensus 195 ~I~k~~Gg~~~-ds~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E 267 (528)
T 3p9d_D 195 RLVKKVGGTID-DTEMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEE 267 (528)
T ss_dssp BCCCCCSSCSC-CCEEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHH
T ss_pred EEEEecCCCcc-ceEEEeeeEEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHH
Confidence 99998 5899999999999999997 788999999999999886 444
Q ss_pred --HHHHHHHHHHHhCCCeEEEecCc-----cchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecC
Q 023832 122 --AVVRVLELALKRQRPLLIVAEDV-----ESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEE 194 (276)
Q Consensus 122 --~i~p~le~i~~~~~pLlIiae~i-----~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~ 194 (276)
.+.|+|+++.+.|+||||++++| +++|+++|+.|+ ++|| ++.++++|+|||.+|||+++++
T Consensus 268 ~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~ii~~- 335 (528)
T 3p9d_D 268 RAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVV-----KDIEREEIEFLSKGLGCKPIAD- 335 (528)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEE-----ECCCTHHHHHHHHHHTCCCCSC-
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEE-----EeCCHHHHHHHHHHHCCEEecc-
Confidence 48999999999999999999999 999999999985 4588 5889999999999999999999
Q ss_pred CCccccccCcccCceeeEEEEe
Q 023832 195 LGMDLEKVNLDMLGTCKKVTIS 216 (276)
Q Consensus 195 ~g~~l~~~~~~~LG~a~~v~v~ 216 (276)
++++++++||+|++|++.
T Consensus 336 ----~~~l~~~~LG~a~~v~~~ 353 (528)
T 3p9d_D 336 ----IELFTEDRLDSADLVEEI 353 (528)
T ss_dssp ----STTCCSSSEEEESCEECC
T ss_pred ----cccCCHHHCCcccEEEEE
Confidence 799999999999999865
No 19
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5e-38 Score=308.97 Aligned_cols=211 Identities=16% Similarity=0.299 Sum_probs=178.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC----hHHHHHHhhhcCCC------chhHHHHHHHHHHhccc-------Cc
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST----SEEIAQVGTISANG------EREIGELIAKAMEKVGK-------EG 63 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~----~~~i~~VA~iSa~~------d~~ig~lia~Av~~vg~-------~G 63 (276)
.||+.|++||++|++.+++.|+++|+|++. +++|.+||++|+++ .+.+++++.||+..|.. .+
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~ 185 (515)
T 3iyg_E 106 IHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFE 185 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcc
Confidence 599999999999999999999999999864 68999999999863 24566677777776653 14
Q ss_pred cEEEe--cCCcceeeEEEEEeEEEeeeccCccccccccc-ceeeecCceEEE-----ecccCCcHHHH-----------H
Q 023832 64 VITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKN-QKCELEDPLILV-----HEKKISNLTAV-----------V 124 (276)
Q Consensus 64 ~I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~-~~~~l~~p~Ill-----~d~~i~~~~~i-----------~ 124 (276)
.|+|+ .|++++ ++++++||+|||||.||||+++.++ +.+.|+.|+.+. ++.+|++++++ .
T Consensus 186 ~I~I~k~~Ggs~~-ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~ 264 (515)
T 3iyg_E 186 LIKVEGKVGGRLE-DTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFE 264 (515)
T ss_pred cEEEEEecCCCcc-cceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHH
Confidence 56665 588887 5999999999999999999988764 666777777776 56678888886 7
Q ss_pred HHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCc
Q 023832 125 RVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNL 204 (276)
Q Consensus 125 p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~ 204 (276)
|+|+++.++|+||||++++|+++||++|+.|+++ ||+ +..+++|+|||.+|||+++++ ++++++
T Consensus 265 ~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~------~v~-----~v~k~~le~ia~~tGa~ii~~-----l~~l~~ 328 (515)
T 3iyg_E 265 EMIRQIKETGANLAVCQWGFDDEANHLLLQNDLP------AVR-----WVGGPEIELIAIATGGRIVPR-----FSELTA 328 (515)
T ss_pred HHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCE------EEe-----ccCHHHHHHHHHHhCCEEecc-----cccCCH
Confidence 8999999999999999999999999999999887 664 556999999999999999998 999999
Q ss_pred ccCceeeEEEE-----eCCcEEEEcCCCC
Q 023832 205 DMLGTCKKVTI-----SKDDTVILDGAGD 228 (276)
Q Consensus 205 ~~LG~a~~v~v-----~~~~T~i~~g~g~ 228 (276)
++||+|++|++ +++.++++.|.++
T Consensus 329 ~~LG~a~~v~~~~ig~~k~~~~~~~g~~~ 357 (515)
T 3iyg_E 329 EKLGFAGLVKEISFGTTKDKMLVIEQCKN 357 (515)
T ss_pred HHCCcceEEEEEEeccccceEEEEEcCCC
Confidence 99999999998 6677777766444
No 20
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-37 Score=305.29 Aligned_cols=200 Identities=17% Similarity=0.217 Sum_probs=170.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC--ChHHHHHHhhhcCCCc------hhHHHHHHHHHHhccc---Ccc-----
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS--TSEEIAQVGTISANGE------REIGELIAKAMEKVGK---EGV----- 64 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~--~~~~i~~VA~iSa~~d------~~ig~lia~Av~~vg~---~G~----- 64 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|++++ +.+|+|++|||.+|++ +|+
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~ 186 (518)
T 3iyg_D 107 IHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRD 186 (518)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccce
Confidence 59999999999999999999999999998 7899999999998754 7899999999999996 665
Q ss_pred EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccC-------------CcHH--------
Q 023832 65 ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKI-------------SNLT-------- 121 (276)
Q Consensus 65 I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i-------------~~~~-------- 121 (276)
|+|+ .|++.. ++++++||+||+||.| + |+..++||+|+++++++ ++++
T Consensus 187 I~V~k~~Gg~~~-ds~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~ 257 (518)
T 3iyg_D 187 IKIVKKLGGTID-DCELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLRE 257 (518)
T ss_pred EEEEEcCCCChh-hheEeccEEEeccccc-C-------CCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHH
Confidence 8886 577776 6999999999999998 1 22345667777666654 5554
Q ss_pred ---HHHHHHHHHHHhCCCeEEE-----ecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEec
Q 023832 122 ---AVVRVLELALKRQRPLLIV-----AEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 122 ---~i~p~le~i~~~~~pLlIi-----ae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~ 193 (276)
++.|+|+++.+.|+||||+ +++|+++||++|+.| +|+|||.|++ .+|+|||.+|||+++++
T Consensus 258 E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~-----~~le~ia~~tGa~ii~~ 326 (518)
T 3iyg_D 258 ERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVKDIER-----EDIEFICKTIGTKPVAH 326 (518)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEecCCH-----HHHHHHHHHhCCEEecc
Confidence 5899999999999999999 899999999999998 4679988875 57999999999999999
Q ss_pred CCCccccccCcccCceeeEEEEeC----CcEEEEcC
Q 023832 194 ELGMDLEKVNLDMLGTCKKVTISK----DDTVILDG 225 (276)
Q Consensus 194 ~~g~~l~~~~~~~LG~a~~v~v~~----~~T~i~~g 225 (276)
++++++++||+|++|++.+ +..+++.|
T Consensus 327 -----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g 357 (518)
T 3iyg_D 327 -----VDQFTADMLGSAELAEEVSLNGSGKLIKITG 357 (518)
T ss_pred -----cccCCHHHCCcCcEEEEEEeCCCceEEEEEC
Confidence 9999999999999998653 23455655
No 21
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.2e-37 Score=303.27 Aligned_cols=209 Identities=13% Similarity=0.211 Sum_probs=180.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHh-cCcccC--ChHHHHHHhhhcC------CCchhHHHHHHHHHHhcc---cCc-----
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKS-RARMIS--TSEEIAQVGTISA------NGEREIGELIAKAMEKVG---KEG----- 63 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~-~s~~v~--~~~~i~~VA~iSa------~~d~~ig~lia~Av~~vg---~~G----- 63 (276)
.||+.|++||++|++.+++.|++ +|+|++ ++++|.+||++|. ++++.+|+|++|||.+|+ ++|
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~d 185 (529)
T 3iyg_A 106 IHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYP 185 (529)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccc
Confidence 59999999999999999999999 999998 6899999999995 357899999999999998 455
Q ss_pred c--EEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccCC-------------cHH-----
Q 023832 64 V--ITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLT----- 121 (276)
Q Consensus 64 ~--I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~-------------~~~----- 121 (276)
+ |+|+ .|++++ ++++++||.||+||.||||+ ..++||+|+++|+++. +++
T Consensus 186 v~~I~I~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~-------~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i 257 (529)
T 3iyg_A 186 VNSINVLKAHGRSQM-ESMLINGYALNCVVGSQGMP-------KRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQI 257 (529)
T ss_pred cceEEEEEecCCCcc-ceEEEeeeEEecCcccccCC-------cccCCceEEEecCCcccccccCCceEEeCCHHHHHHH
Confidence 3 8885 688877 59999999999999999864 4789999999999652 222
Q ss_pred ------HHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCC
Q 023832 122 ------AVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEEL 195 (276)
Q Consensus 122 ------~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~ 195 (276)
.+.++++++.+.|+||||++++|+++|+++|+.|+ ++|| ++.++++|+|||.+|||+++++..
T Consensus 258 ~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av-----~~v~k~~leria~~tGa~iv~~~~ 326 (529)
T 3iyg_A 258 RQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAV-----RRVLKRDLKRIAKASGATVLSTLA 326 (529)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Ccee-----ccCCHHHHHHHHHHhCCeeecchh
Confidence 38889999999999999999999999999999995 4577 689999999999999999999977
Q ss_pred Ccc-ccccCcccCceeeEEE---EeCCcEEEEcCCCC
Q 023832 196 GMD-LEKVNLDMLGTCKKVT---ISKDDTVILDGAGD 228 (276)
Q Consensus 196 g~~-l~~~~~~~LG~a~~v~---v~~~~T~i~~g~g~ 228 (276)
+++ ++++++++||+|++|+ ++++.++++.|.++
T Consensus 327 ~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~ 363 (529)
T 3iyg_A 327 NLEGEETFEASMLGQAEEVVQERICDDELILIKNTKA 363 (529)
T ss_pred cccchhccChhhCccceEEEEEEeCCceEEEEEcCCC
Confidence 776 4678899999999998 77666666666443
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.5e-38 Score=313.58 Aligned_cols=200 Identities=17% Similarity=0.239 Sum_probs=175.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC-----hHHHHHHhhhcCCC------chhHHHHHHHHHHhcccCc---cEE
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST-----SEEIAQVGTISANG------EREIGELIAKAMEKVGKEG---VIT 66 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~-----~~~i~~VA~iSa~~------d~~ig~lia~Av~~vg~~G---~I~ 66 (276)
+||+.|++||++|++.+++.|+++|+|+++ +++|.+||++|+++ ++.||+|++|||.+||++| +|+
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~ 194 (527)
T 3p9d_B 115 IHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQ 194 (527)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEE
Confidence 599999999999999999999999999986 79999999999864 6899999999999999998 899
Q ss_pred Ee--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc--------------CCcHHHH-------
Q 023832 67 IH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK--------------ISNLTAV------- 123 (276)
Q Consensus 67 ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~--------------i~~~~~i------- 123 (276)
|+ .|++++ ++++++||+|||||.||| |+ .++||+||+++++ |++++++
T Consensus 195 V~k~~gg~~~-ds~lv~G~~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E 265 (527)
T 3p9d_B 195 IIKILGGKLS-DSFLDEGFILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAE 265 (527)
T ss_dssp CCBCCCSSSS-CCCEESSCCCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHH
T ss_pred EEEcCCCCcc-ccEEEEeEEEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHH
Confidence 97 477776 589999999999999998 33 4589999998885 4555554
Q ss_pred ----HHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccc
Q 023832 124 ----VRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDL 199 (276)
Q Consensus 124 ----~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l 199 (276)
+|.|+++.++|+||||++++|+++|+++|..|+ ++||+.|+ +.+|+|||.+|||+++++ +
T Consensus 266 ~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~~-----~~dle~ia~~tGa~iv~~-----~ 329 (527)
T 3p9d_B 266 REKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHAD-----FEGVERLALVTGGEVVST-----F 329 (527)
T ss_dssp HHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCCH-----HHHHHHHHHHTCCCCCST-----T
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecCC-----HHHHHHHHHHhCCEEecc-----h
Confidence 789999999999999999999999999999995 56887655 456999999999999999 8
Q ss_pred cccCcccCceeeEEE---EeCCcEEEEcC
Q 023832 200 EKVNLDMLGTCKKVT---ISKDDTVILDG 225 (276)
Q Consensus 200 ~~~~~~~LG~a~~v~---v~~~~T~i~~g 225 (276)
+++++++||+|++|+ +++++++++.|
T Consensus 330 ~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 358 (527)
T 3p9d_B 330 DEPSKCKLGECDVIEEIMLGEQPFLKFSG 358 (527)
T ss_dssp SCCTTSCEECSBCCBCCCSSSCCBCCBCS
T ss_pred hhCCHHHCCCCcEEEEEEecceEEEEEEC
Confidence 999999999999998 55555555555
No 23
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.1e-38 Score=311.06 Aligned_cols=222 Identities=16% Similarity=0.256 Sum_probs=186.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC-----hHHHHHHhhhcC------CCchhHHHHHHHHHHhcc-cC------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST-----SEEIAQVGTISA------NGEREIGELIAKAMEKVG-KE------ 62 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~-----~~~i~~VA~iSa------~~d~~ig~lia~Av~~vg-~~------ 62 (276)
.||+.|++||++|++.+++.|+++|+|++. +++|.+||++|. .+++.||+|++|||.+|+ .+
T Consensus 120 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I 199 (550)
T 3p9d_G 120 ISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLI 199 (550)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchhe
Confidence 599999999999999999999999999974 678999999984 357899999999999999 45
Q ss_pred ccEEEecCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEeccc-------------CCcHHHHHH----
Q 023832 63 GVITIHDGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKK-------------ISNLTAVVR---- 125 (276)
Q Consensus 63 G~I~ie~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~-------------i~~~~~i~p---- 125 (276)
|+++++ |++++| +++++||+|||||+||||++++++ ++|||||++|++ |++++++.|
T Consensus 200 ~Vikv~-Gg~~~d-s~lv~G~~~dk~~~s~yf~~~~~~----~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~ 273 (550)
T 3p9d_G 200 GIKKIP-GGAMEE-SLFINGVAFKKTFSYAGFEQQPKK----FNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDA 273 (550)
T ss_dssp CCCBCC-SSCGGG-CCCCSSEEECCCSSCTTCSCSCSC----CSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHH
T ss_pred eEEEec-CCCccc-eeEEeeEEEeccccccccccCccc----ccCceEEEeccccccccccccceeeeCCHHHHHHHHHH
Confidence 777876 888886 599999999999999999976664 999999999998 567777666
Q ss_pred -------HHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCcc
Q 023832 126 -------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMD 198 (276)
Q Consensus 126 -------~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~ 198 (276)
+|+++.++|.++||++++|++.|+++|..+++. ++ ++.++.+|+|||.+|||+++++
T Consensus 274 E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~------~v-----~~v~k~~lerIa~~tGa~iis~----- 337 (550)
T 3p9d_G 274 EWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIF------CA-----GRVSADDMNRVIQAVGGSIQST----- 337 (550)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCE------EE-----ECCCTTHHHHHHHHTCCCCBSS-----
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCc------cc-----cCcCHHHHHHHHHHhCCceecc-----
Confidence 678899999999999999999999999877442 44 8999999999999999999998
Q ss_pred ccccCcccCceeeEEEE---eCCc-------------EEEEcCCCCHHHHHHHHHHHHHHHHh
Q 023832 199 LEKVNLDMLGTCKKVTI---SKDD-------------TVILDGAGDKKSIEERCEQIRSAIEN 245 (276)
Q Consensus 199 l~~~~~~~LG~a~~v~v---~~~~-------------T~i~~g~g~~~~i~~r~~~l~~~~~~ 245 (276)
++++++++||+|++|++ .+++ |++++| ++...++++-+.+...+..
T Consensus 338 l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG-~te~~l~E~kr~l~DAl~~ 399 (550)
T 3p9d_G 338 TSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRG-GAEQVIAEVERSLHDAIMI 399 (550)
T ss_dssp GGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCS-SSHHHHHHHHHHHHHHHHH
T ss_pred hhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeC-CcHHHHHHHHHHHHhHHHH
Confidence 99999999999999986 3444 444444 3456667666666666544
No 24
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.2e-36 Score=297.16 Aligned_cols=198 Identities=17% Similarity=0.248 Sum_probs=173.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhc----CcccCChHHHHHHhhhcCCC-----chhHHHHHHHHHHhcccC-ccEEEec-
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSR----ARMISTSEEIAQVGTISANG-----EREIGELIAKAMEKVGKE-GVITIHD- 69 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~----s~~v~~~~~i~~VA~iSa~~-----d~~ig~lia~Av~~vg~~-G~I~ie~- 69 (276)
.||+.|++||++|++.+++.|+++ ++|++++++|.+||++|+++ ++.+|+|+++||.+||++ |+|++++
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I 186 (512)
T 3iyg_Q 107 LSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNI 186 (512)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHe
Confidence 599999999999999999999999 67888999999999999865 788999999999999987 6777654
Q ss_pred ------CCcceeeEEEEEeEEEeeeccCcccccccc-cceeeecCce-EEEeccc----CCcHHHHHHH-------HH--
Q 023832 70 ------GKTLYNELEVVEGMKLDRGYISPYFITNQK-NQKCELEDPL-ILVHEKK----ISNLTAVVRV-------LE-- 128 (276)
Q Consensus 70 ------g~~~~~~l~v~eG~~fd~gy~spyfvt~~~-~~~~~l~~p~-Ill~d~~----i~~~~~i~p~-------le-- 128 (276)
|+++. ++++++||+|||||.| |+++.+ .+...|+.|+ ++.++.+ |++++++.|+ |+
T Consensus 187 ~i~k~~Ggs~~-ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~ 263 (512)
T 3iyg_Q 187 RVCKILGSGVH-SSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQ 263 (512)
T ss_pred eEeeccCCCcc-cceEEeeEEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHH
Confidence 88885 7999999999999986 777665 4455567777 6677767 8999999998 66
Q ss_pred --HHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCccc
Q 023832 129 --LALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDM 206 (276)
Q Consensus 129 --~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~ 206 (276)
++.++|+||||++++|++.++++|..+ +|+|||.|++ .+|+|||.+|||+++++ ++++++++
T Consensus 264 v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~~-----~dle~ia~~tGa~iis~-----l~~~~~~~ 327 (512)
T 3iyg_Q 264 VKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNSK-----WDLRRLCKTVGATALPR-----LNPPVLEE 327 (512)
T ss_pred HHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCCH-----HHHHHHHHHhCCEEecc-----cccCCHHH
Confidence 899999999999999999999999764 6789998885 45999999999999998 99999999
Q ss_pred CceeeEEEEeC
Q 023832 207 LGTCKKVTISK 217 (276)
Q Consensus 207 LG~a~~v~v~~ 217 (276)
||+|++|++.+
T Consensus 328 LG~a~~v~~~~ 338 (512)
T 3iyg_Q 328 MGHCDSVYLSE 338 (512)
T ss_pred CCcccEEEEEE
Confidence 99999999764
No 25
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.1e-36 Score=300.24 Aligned_cols=209 Identities=18% Similarity=0.316 Sum_probs=174.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCCh------HHHHHHhhhcCC------CchhHHHHHHHHHHhcccC------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMISTS------EEIAQVGTISAN------GEREIGELIAKAMEKVGKE------ 62 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~~------~~i~~VA~iSa~------~d~~ig~lia~Av~~vg~~------ 62 (276)
.||+.|++||++|++.+++.|+++|+|+++. ++|.+||++|++ ..+.+++++.||+..|...
T Consensus 141 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d 220 (562)
T 3p9d_E 141 IHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVD 220 (562)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCC
Confidence 5999999999999999999999999999743 689999999975 2356899999999988652
Q ss_pred -ccEEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecc-------------cCCcHHH----
Q 023832 63 -GVITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTA---- 122 (276)
Q Consensus 63 -G~I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~-------------~i~~~~~---- 122 (276)
+.|+|+ .|+++++ +++++||+|||||.||||+++.+ .+..++||+|+++++ +|+++++
T Consensus 221 ~~~I~I~k~~Ggs~~d-s~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~ 298 (562)
T 3p9d_E 221 FDLIKMQGRVGGSISD-SKLINGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKL 298 (562)
T ss_dssp CCCCEEEEESSSCGGG-CEEESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHH
T ss_pred cccEEEEEecCCChhh-hceeeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHH
Confidence 578886 5999885 79999999999999999998762 122235566665555 5677766
Q ss_pred -------HHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCC
Q 023832 123 -------VVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEEL 195 (276)
Q Consensus 123 -------i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~ 195 (276)
+.|+|+++.++|+||||++++|+++||++|+.|+++ ||+ +.++++|+|||.+|||+++++
T Consensus 299 ~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~------~v~-----~v~k~~le~ia~~TGa~iis~-- 365 (562)
T 3p9d_E 299 QTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLP------AVR-----WVGGQELEHIAISTNGRIVPR-- 365 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCC------CEE-----CCCTTTHHHHHHHHCCCEEES--
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCE------EEe-----ccCHHHHHHHHHHhCCEEEec--
Confidence 789999999999999999999999999999999887 564 557999999999999999998
Q ss_pred CccccccCcccCceeeEEEE-----eCCcEEEEcCCC
Q 023832 196 GMDLEKVNLDMLGTCKKVTI-----SKDDTVILDGAG 227 (276)
Q Consensus 196 g~~l~~~~~~~LG~a~~v~v-----~~~~T~i~~g~g 227 (276)
++++++++||+|++|++ +++.++++.|.+
T Consensus 366 ---l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~ 399 (562)
T 3p9d_E 366 ---FQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSK 399 (562)
T ss_dssp ---SSCCCTTSCEECSCEEEECCSSSSCCEEEECCCS
T ss_pred ---cccCCHHHCCcceEEEEEEeccCCceEEEEecCC
Confidence 99999999999999998 456666666543
No 26
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-35 Score=292.69 Aligned_cols=203 Identities=17% Similarity=0.334 Sum_probs=169.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC-ChHHHHHHhhhcCCCchhHHHHHHHHHHhcccCccEEEecC---------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS-TSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIHDG--------- 70 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~-~~~~i~~VA~iSa~~d~~ig~lia~Av~~vg~~G~I~ie~g--------- 70 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|+++ +++..++++|.+++.|++++|+++
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~s--Ki~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I 183 (517)
T 3iyg_Z 106 LHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRT--KVHAELADVLTEAVVDSILAIKKQDEPIDLFMV 183 (517)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHhheeccCCCcCChhHh
Confidence 59999999999999999999999999998 889999999999863 366677777777777777777654
Q ss_pred -------CcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccCC-------------------------
Q 023832 71 -------KTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS------------------------- 118 (276)
Q Consensus 71 -------~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~------------------------- 118 (276)
++. +++++++||+||+||.||| |+.+++|||||++|++|+
T Consensus 184 ~I~k~~Gg~~-~ds~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E 255 (517)
T 3iyg_Z 184 EIMEMKHKSE-TDTSLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAE 255 (517)
T ss_pred eeeeecCCCc-cccceEeeEEEeccCCCCC-------ccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHH
Confidence 344 4799999999999999997 678999999999999873
Q ss_pred ------cHHHHHHHHHHHH-HhCCCeEEEe-cCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeE
Q 023832 119 ------NLTAVVRVLELAL-KRQRPLLIVA-EDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDL 190 (276)
Q Consensus 119 ------~~~~i~p~le~i~-~~~~pLlIia-e~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~v 190 (276)
.+++|+|+.+.+. +.++|+|||+ ++|+++|+++|..+++ +||+ +.++.+|+|||.+|||++
T Consensus 256 ~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI------~~v~-----~v~~~~leria~~tGa~i 324 (517)
T 3iyg_Z 256 RKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGI------IALR-----RAKRRNMERLTLACGGIA 324 (517)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCC------EEEE-----ecCHHHHHHHHHHhCCEE
Confidence 2345666665544 3578999998 6999999999999843 4663 567899999999999999
Q ss_pred EecCCCccccccCccc-CceeeEE---EEeCCcEEEEcCCCCHH
Q 023832 191 ITEELGMDLEKVNLDM-LGTCKKV---TISKDDTVILDGAGDKK 230 (276)
Q Consensus 191 i~~~~g~~l~~~~~~~-LG~a~~v---~v~~~~T~i~~g~g~~~ 230 (276)
+++ ++++++++ ||+|+ | +++++.++++.|.+++.
T Consensus 325 v~~-----l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~ 362 (517)
T 3iyg_Z 325 LNS-----LDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR 362 (517)
T ss_pred ecc-----hhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch
Confidence 998 99999999 99999 9 67788888887766544
No 27
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-34 Score=283.53 Aligned_cols=190 Identities=18% Similarity=0.295 Sum_probs=166.2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccCC--hHHHHHHhhhcCCCchh-------HHHHHHHHHHhcccC--c------
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIST--SEEIAQVGTISANGERE-------IGELIAKAMEKVGKE--G------ 63 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~~--~~~i~~VA~iSa~~d~~-------ig~lia~Av~~vg~~--G------ 63 (276)
.||+.|++||++|++.+++.|+++|.|++. ++.|.++|++|.+ ++. +.+++.+|+..|..+ |
T Consensus 105 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~-sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl 183 (515)
T 3iyg_G 105 MHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSIT-TKVISRWSSLACNIALDAVKTVQFEENGRKEIDI 183 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhc-CCchhhHHHHHHHHHHHHHHhcccccCCCcccch
Confidence 599999999999999999999999999984 6899999999975 443 456788888887622 3
Q ss_pred --cEEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecc-------------cCCcHHHHHHH
Q 023832 64 --VITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEK-------------KISNLTAVVRV 126 (276)
Q Consensus 64 --~I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~-------------~i~~~~~i~p~ 126 (276)
+|.|+ .|++++ ++++++||+|||||.||+ |+.+++|||||++|+ +|++++++.|+
T Consensus 184 ~~~I~I~ki~Ggs~~-ds~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~ 255 (515)
T 3iyg_G 184 KKYARVEKIPGGIIE-DSCVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRI 255 (515)
T ss_pred hheeEEEEecCCCcc-cceEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHH
Confidence 26775 688887 699999999999999994 788999999999999 78999999999
Q ss_pred HH-----------HHHHhCCCeEEEec-CccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecC
Q 023832 127 LE-----------LALKRQRPLLIVAE-DVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEE 194 (276)
Q Consensus 127 le-----------~i~~~~~pLlIiae-~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~ 194 (276)
++ ++.+.| |+|||++ +|++.|+++|..+++ +|| ++.++++|+|||.+|||+++++
T Consensus 256 l~~E~~~l~~~v~kI~~~g-~~vIi~~~~I~~~al~~L~~~~I------~av-----~~~~k~~leria~~tGa~ii~~- 322 (515)
T 3iyg_G 256 LQMEEEYIQQLCEDIIQLK-PDVVITEKGISDLAQHYLMRANI------TAI-----RRVRKTDNNRIARACGARIVSR- 322 (515)
T ss_pred HHHHHHHHHHHHHHHHhCC-CCEEEECCccCHHHHHHHHHCCc------eee-----ccCCHHHHHHHHHHhCCeeecc-
Confidence 88 888876 7778887 799999999998744 465 8999999999999999999999
Q ss_pred CCccccccCcccCce-eeEEEEe
Q 023832 195 LGMDLEKVNLDMLGT-CKKVTIS 216 (276)
Q Consensus 195 ~g~~l~~~~~~~LG~-a~~v~v~ 216 (276)
++++++++||+ |+.|++.
T Consensus 323 ----l~~l~~~~LG~~a~~v~~~ 341 (515)
T 3iyg_G 323 ----PEELREEDVGTGAGLLEIK 341 (515)
T ss_pred ----ccccChhhcCCcccEEEEE
Confidence 99999999999 9999865
No 28
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=7.5e-35 Score=289.33 Aligned_cols=200 Identities=18% Similarity=0.233 Sum_probs=174.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCccc----CChHHHHHHhhhcC-----CCchhHHHHHHHHHHhcccC-----c---
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMI----STSEEIAQVGTISA-----NGEREIGELIAKAMEKVGKE-----G--- 63 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v----~~~~~i~~VA~iSa-----~~d~~ig~lia~Av~~vg~~-----G--- 63 (276)
.||+.|++||++|++.+++.|+++|.|+ +++++|.+||++|. ++++.||+|+++||.+|+++ |
T Consensus 122 ihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~ 201 (568)
T 3p9d_H 122 LSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPY 201 (568)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------C
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcc
Confidence 5999999999999999999999999987 67899999999984 34689999999999999985 4
Q ss_pred ----cEEEec--CCcceeeEEEEEeEEEeeeccCcccccccccceeeec---CceEEEeccc-------------CCcHH
Q 023832 64 ----VITIHD--GKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELE---DPLILVHEKK-------------ISNLT 121 (276)
Q Consensus 64 ----~I~ie~--g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~---~p~Ill~d~~-------------i~~~~ 121 (276)
+|+|+. |+++++ +++++||.||++|. +|+.+++ ||+||++|++ |++++
T Consensus 202 ~dl~~I~I~k~~Ggs~~d-S~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~ 271 (568)
T 3p9d_H 202 FNVDSIRVVKIMGGSLSN-STVIKGMVFNREPE---------GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQ 271 (568)
T ss_dssp CCGGGCEEEEEESSCGGG-CEEESSCCBSSCBS---------SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHH
T ss_pred cccceEEEEEccCCCcch-heeeccEEEeeccc---------CCcEEEecCCcceEEEEccCccccccccCceEEeCCHH
Confidence 789974 999985 79999999999983 4778888 9999999998 77788
Q ss_pred HHHH-----------HHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeE
Q 023832 122 AVVR-----------VLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDL 190 (276)
Q Consensus 122 ~i~p-----------~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~v 190 (276)
++.| +++++.+.|+||||++++|+++|+++|+.|+ |+|||.|+ +.+|+|||.+|||++
T Consensus 272 ~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~av~~v~-----~~~leria~~tGa~i 340 (568)
T 3p9d_H 272 EMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG------ILVLKVPS-----KFELRRLCRVCGATP 340 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT------CEEECCCC-----HHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC------eEEEecCC-----HHHHHHHHHHhCCEE
Confidence 8776 7899999999999999999999999999984 67997665 778999999999999
Q ss_pred EecCCCccccccCcccCceeeEEEEeC---CcEEEEcCC
Q 023832 191 ITEELGMDLEKVNLDMLGTCKKVTISK---DDTVILDGA 226 (276)
Q Consensus 191 i~~~~g~~l~~~~~~~LG~a~~v~v~~---~~T~i~~g~ 226 (276)
+++ ++++++++||+|++|++.+ ++++++.|.
T Consensus 341 vs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~ 374 (568)
T 3p9d_H 341 LPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFKQE 374 (568)
T ss_dssp CSS-----SSCCCGGGCEECSCCCCCEETTEECBCCCCC
T ss_pred Eec-----cccCCHHHCCcceEEEEEEecCceEEEEecC
Confidence 999 9999999999999998654 556666553
No 29
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5.8e-36 Score=296.16 Aligned_cols=220 Identities=15% Similarity=0.260 Sum_probs=167.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCcccC----ChHHHHHHhhhcCCC------chhHHHHHHHHHHhcccC-------c
Q 023832 1 MNAMDLRRGITMAVDAVVTNLKSRARMIS----TSEEIAQVGTISANG------EREIGELIAKAMEKVGKE-------G 63 (276)
Q Consensus 1 ~~P~~i~rGi~~A~~~v~~~L~~~s~~v~----~~~~i~~VA~iSa~~------d~~ig~lia~Av~~vg~~-------G 63 (276)
.||+.|++||++|++.+++.|+++|+|++ ++++|.+||++|++. .+.+++++.||+..|... .
T Consensus 113 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~ 192 (546)
T 3p9d_F 113 VHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLH 192 (546)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGG
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccch
Confidence 49999999999999999999999999994 689999999999862 345777777777766521 2
Q ss_pred cEEEe--cCCcceeeEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccCCc----------------------
Q 023832 64 VITIH--DGKTLYNELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISN---------------------- 119 (276)
Q Consensus 64 ~I~ie--~g~~~~~~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~---------------------- 119 (276)
.|.|. .|++.. ++++++||.||+||.||+ |+.+++|||||++|++++.
T Consensus 193 ~I~i~ki~Gg~~~-ds~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~ 264 (546)
T 3p9d_F 193 MVEIMQMQHLSPK-DTTFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAA 264 (546)
T ss_dssp GEEEECCCCSCTT-TCCCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHH
T ss_pred heEEEEecCCCcc-ccEEEeeEEEeccccccc-------CcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHH
Confidence 56664 576766 599999999999999994 7889999999999987632
Q ss_pred ---------HHHHHHHHHHHHH--hCCCeEEEec-CccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhC
Q 023832 120 ---------LTAVVRVLELALK--RQRPLLIVAE-DVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTG 187 (276)
Q Consensus 120 ---------~~~i~p~le~i~~--~~~pLlIiae-~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TG 187 (276)
+++|+|+++++.+ +|+|+|||++ +|+++||++|+.|++ +|| ++.++.+|+|||.+||
T Consensus 265 ~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI------~~v-----r~v~~~~leria~~tG 333 (546)
T 3p9d_F 265 SERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNI------LAL-----RRAKRRNMERLQLVTG 333 (546)
T ss_dssp HHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTC------EEE-----CCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCC------eeE-----ecCCHHHHHHHHHHhC
Confidence 2344454545444 6789999997 999999999999976 477 5678899999999999
Q ss_pred CeEEecCCCccccccCcccCceeeEE---EEeCCcEEEEcCCC------------CHHHHHHHHHHHHHHHH
Q 023832 188 GDLITEELGMDLEKVNLDMLGTCKKV---TISKDDTVILDGAG------------DKKSIEERCEQIRSAIE 244 (276)
Q Consensus 188 g~vi~~~~g~~l~~~~~~~LG~a~~v---~v~~~~T~i~~g~g------------~~~~i~~r~~~l~~~~~ 244 (276)
|+++++ ++++++++||+|++| .++++.++++.|.+ ++..++++-+.+...+.
T Consensus 334 a~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~ 400 (546)
T 3p9d_F 334 GEAQNS-----VEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLR 400 (546)
T ss_dssp BCCCCC-----CSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred CEEecc-----hhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 999998 999999999999999 46666555555533 34445555555554443
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.80 E-value=3.7e-19 Score=152.47 Aligned_cols=129 Identities=19% Similarity=0.319 Sum_probs=109.7
Q ss_pred eEEEEEeEEEeeeccCcccccccccceeeecCceEEEecccCCc-------------H-----------HHHHHHHHHHH
Q 023832 76 ELEVVEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISN-------------L-----------TAVVRVLELAL 131 (276)
Q Consensus 76 ~l~v~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~-------------~-----------~~i~p~le~i~ 131 (276)
++++++|+.|++++.+| +|+..++||+|+++++.++. + +.+...++++.
T Consensus 3 dS~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~ 75 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDII 75 (178)
T ss_dssp CCSEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58899999999999887 57888999999999996642 2 22566689999
Q ss_pred HhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCce-e
Q 023832 132 KRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGT-C 210 (276)
Q Consensus 132 ~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~-a 210 (276)
+.|.++++...+|++.|+++|..+++. || ++.++.+|++||.+|||+++++ ++++++++||+ |
T Consensus 76 ~~g~nVVl~~k~I~d~a~~~l~k~gI~------~v-----r~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~ 139 (178)
T 1gml_A 76 QLKPDVVITEKGISDLAQHYLMRANVT------AI-----RRVRKTDNNRIARACGARIVSR-----PEELREDDVGTGA 139 (178)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHTTCE------EE-----CCCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCE
T ss_pred hcCCcEEEECCcccHHHHHHHHHCCCE------EE-----ecCCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcc
Confidence 999888877789999999999999765 77 7999999999999999999999 99999999999 9
Q ss_pred eEEEEe----------------CCcEEEEcCCC
Q 023832 211 KKVTIS----------------KDDTVILDGAG 227 (276)
Q Consensus 211 ~~v~v~----------------~~~T~i~~g~g 227 (276)
+.|+.. +.+|+++||+.
T Consensus 140 ~~v~~~~ig~~~~~~~~gc~~~~~~TIllRG~~ 172 (178)
T 1gml_A 140 GLLEIKKIGDEYFTFITDCKDPKACTILLRGAS 172 (178)
T ss_dssp EEEEEEEETTEEEEEEEEESSTTSCEEEEEC--
T ss_pred cEEEEEEECCeEEEEEECCCCCCEEEEEEECCC
Confidence 998832 67788888854
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.76 E-value=3.4e-18 Score=144.06 Aligned_cols=126 Identities=17% Similarity=0.332 Sum_probs=108.5
Q ss_pred EEeEEEeeeccCcccccccccceeeecCceEEEecccCC-------------cHHH-----------HHHHHHHHHHhCC
Q 023832 80 VEGMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKIS-------------NLTA-----------VVRVLELALKRQR 135 (276)
Q Consensus 80 ~eG~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~-------------~~~~-----------i~p~le~i~~~~~ 135 (276)
++|+.|++++.+| +|+..++||+|+++|+.++ ++++ +...++++.++|.
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999999887 5788999999999999764 3333 5666999999998
Q ss_pred CeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEecCCCccccccCcccCceeeEEE-
Q 023832 136 PLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEELGMDLEKVNLDMLGTCKKVT- 214 (276)
Q Consensus 136 pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~~g~~l~~~~~~~LG~a~~v~- 214 (276)
++++...+|++.|+++|..+++. || ++.++.+|++||.+|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~gI~------~v-----~~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEGIY------AV-----RRVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCE------EE-----CSCCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCCCE------EE-----ccCCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 88777789999999999999664 77 7999999999999999999999 9999999999999998
Q ss_pred --EeCCcEEEEcCCCC
Q 023832 215 --ISKDDTVILDGAGD 228 (276)
Q Consensus 215 --v~~~~T~i~~g~g~ 228 (276)
+..+..+++.|..+
T Consensus 138 ~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEETTEEEEEEESCC-
T ss_pred EEECCeEEEEEECCCC
Confidence 45788999988543
No 32
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=45.24 E-value=19 Score=31.03 Aligned_cols=41 Identities=12% Similarity=0.280 Sum_probs=32.2
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCccc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVES 146 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~~ 146 (276)
.+|.+|++|.+.+.. +.+..+|....+.|..++++..|.+.
T Consensus 170 ~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~~ 215 (257)
T 1g6h_A 170 TNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDI 215 (257)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHH
Confidence 899999999988764 45778888877668788888777653
No 33
>3ggz_E Vacuolar protein-sorting-associated protein 46; novel MIM binding mode, phosphoprotein, coiled coil, endosome, membrane; 3.80A {Saccharomyces cerevisiae}
Probab=43.94 E-value=14 Score=21.72 Aligned_cols=18 Identities=39% Similarity=0.625 Sum_probs=14.6
Q ss_pred CChhHHHHHHHHHHhhcC
Q 023832 247 TSDYDKEKLQERLAKLSG 264 (276)
Q Consensus 247 ~s~~~~~~L~eRla~L~g 264 (276)
-+++.-+||-|||-.|.|
T Consensus 12 ~~eekEDkLAqRLRALR~ 29 (29)
T 3ggz_E 12 VDDEKEDKLAQRLRALRG 29 (29)
T ss_pred ccchhhHHHHHHHHHHcC
Confidence 466778999999998874
No 34
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=43.48 E-value=23 Score=30.13 Aligned_cols=40 Identities=18% Similarity=0.324 Sum_probs=31.3
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +.+..+|....+.|+.++++..|.+
T Consensus 156 ~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tvi~vtHd~~ 200 (240)
T 1ji0_A 156 SRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNAL 200 (240)
T ss_dssp TCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH
Confidence 789999999988764 4577777777666788888887764
No 35
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=42.50 E-value=22 Score=30.80 Aligned_cols=41 Identities=17% Similarity=0.423 Sum_probs=32.0
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +.+..+|..+.+.|..++++..|.+
T Consensus 169 ~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 214 (262)
T 1b0u_A 169 AMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG 214 (262)
T ss_dssp HTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3899999999988764 4577778777666888888877765
No 36
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=40.69 E-value=21 Score=30.33 Aligned_cols=41 Identities=15% Similarity=0.391 Sum_probs=32.5
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHh-CCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKR-QRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~-~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. ..++.+|..+.+. |+.++++..|++
T Consensus 161 ~~~p~llllDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHd~~ 207 (235)
T 3tif_A 161 ANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN 207 (235)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSCHH
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 3799999999998764 4577888877654 888888888875
No 37
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=39.56 E-value=23 Score=29.85 Aligned_cols=41 Identities=17% Similarity=0.372 Sum_probs=31.8
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
+.+|.++++|.+.+.. +.+..+|....+.|+.++++..|.+
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 201 (224)
T 2pcj_A 156 ANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERE 201 (224)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3899999999998764 4577778777666878888877754
No 38
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=38.99 E-value=18 Score=20.25 Aligned_cols=13 Identities=62% Similarity=0.772 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhc
Q 023832 251 DKEKLQERLAKLS 263 (276)
Q Consensus 251 ~~~~L~eRla~L~ 263 (276)
|-|-|+|||.+|.
T Consensus 9 eledlqerlrklr 21 (27)
T 3twe_A 9 ELEDLQERLRKLR 21 (27)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3467888887764
No 39
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=38.93 E-value=24 Score=29.73 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=31.9
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
+.+|.++++|.+.+.. +.+..+|....+.|+.++++..|.+
T Consensus 149 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~ 194 (214)
T 1sgw_A 149 LVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREEL 194 (214)
T ss_dssp TSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCC
T ss_pred HhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 3889999999987654 5688888887766778888877765
No 40
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=37.39 E-value=27 Score=30.21 Aligned_cols=41 Identities=17% Similarity=0.340 Sum_probs=30.9
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +.+..+|....+.|+.++++..|.+
T Consensus 162 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~ 207 (256)
T 1vpl_A 162 MVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNML 207 (256)
T ss_dssp TTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred HcCCCEEEEeCCccccCHHHHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 3889999999988764 4577777777666777777776754
No 41
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=36.73 E-value=26 Score=30.47 Aligned_cols=41 Identities=17% Similarity=0.356 Sum_probs=31.3
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +.+..+|....+.|..++++.-|.+
T Consensus 175 ~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 220 (263)
T 2olj_A 175 AMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMG 220 (263)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 3789999999988764 4577778777666777887777765
No 42
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=36.57 E-value=35 Score=29.86 Aligned_cols=40 Identities=15% Similarity=0.395 Sum_probs=31.8
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHH-HhCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELAL-KRQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~-~~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +.++.+|..+. +.|..++++.-|.+
T Consensus 160 ~~P~lLlLDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHdl~ 205 (275)
T 3gfo_A 160 MEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDID 205 (275)
T ss_dssp TCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHHHCCEEEEEESCCS
T ss_pred cCCCEEEEECccccCCHHHHHHHHHHHHHHHhhCCCEEEEEecCHH
Confidence 799999999988764 45778888776 55888888887775
No 43
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=36.39 E-value=32 Score=29.78 Aligned_cols=40 Identities=23% Similarity=0.498 Sum_probs=30.5
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +.+..+|....+.|+.++++..|.+
T Consensus 155 ~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tii~vtHd~~ 199 (266)
T 2yz2_A 155 HEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIE 199 (266)
T ss_dssp TCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCT
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 889999999988764 4577777777666777777777765
No 44
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=35.96 E-value=31 Score=27.96 Aligned_cols=21 Identities=14% Similarity=0.047 Sum_probs=16.5
Q ss_pred cCccchHHhHHhHhCCeEEec
Q 023832 173 ENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 173 ~~rk~~LedIA~~TGg~vi~~ 193 (276)
+.....|+.||..|||+.+.-
T Consensus 175 ~~~~~~L~~iA~~~gG~~~~~ 195 (218)
T 3ibs_A 175 RLNEGMCQEIAKDGKGIYVRV 195 (218)
T ss_dssp CCCHHHHHHHHHHTEEEEEEE
T ss_pred cCCHHHHHHHHHhcCCEEEEC
Confidence 345678999999999987644
No 45
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=35.38 E-value=40 Score=29.52 Aligned_cols=41 Identities=17% Similarity=0.363 Sum_probs=32.5
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCe--EEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPL--LIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pL--lIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +.+..+|....+.|+.+ +++.-|.+
T Consensus 177 ~~~p~lLlLDEPts~LD~~~~~~l~~~l~~l~~~g~tv~~iivtHd~~ 224 (279)
T 2ihy_A 177 MGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIE 224 (279)
T ss_dssp HTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHHCTTCEEEEEESCGG
T ss_pred hCCCCEEEEeCCccccCHHHHHHHHHHHHHHHHCCCEEEEEEEecCHH
Confidence 3899999999988764 45777887776668888 88888865
No 46
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=35.01 E-value=37 Score=31.44 Aligned_cols=40 Identities=20% Similarity=0.314 Sum_probs=32.1
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +++...|..+.+ .|..++++.-|.+
T Consensus 150 ~~P~lLLLDEPts~LD~~~~~~l~~~l~~l~~~~g~tii~vTHd~~ 195 (381)
T 3rlf_A 150 AEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV 195 (381)
T ss_dssp HCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSCHH
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 799999999999875 357777877754 4888988888775
No 47
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=33.79 E-value=87 Score=26.62 Aligned_cols=65 Identities=14% Similarity=0.258 Sum_probs=47.8
Q ss_pred ceeeecCceEEEecccCCcHHHHHHHHHHHHHhCCC---eEEEecCccchHHHHHHHhcccccceeeEE
Q 023832 101 QKCELEDPLILVHEKKISNLTAVVRVLELALKRQRP---LLIVAEDVESEALATLILNKLRAGIKVCAI 166 (276)
Q Consensus 101 ~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~~p---LlIiae~i~~~aL~~Lv~n~~~g~~~v~aV 166 (276)
.+ .+++-.+++.|--|.+-..+..+++.+.+.|.| +.+++-=.+++.+..|....-.-.+-+++|
T Consensus 124 lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~~~~P~v~i~ta~i 191 (217)
T 3dmp_A 124 LP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVASL 191 (217)
T ss_dssp CC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEECHHHHHHHHHHCTTCEEEESEE
T ss_pred CC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHHHHCCCCEEEEEEe
Confidence 44 577789999999999999999999999999986 344333336889998887754433444444
No 48
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=33.62 E-value=34 Score=29.39 Aligned_cols=41 Identities=10% Similarity=0.144 Sum_probs=31.8
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHh-CCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKR-QRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~-~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +.+..+|....+. |+.++++..|.+
T Consensus 144 ~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~ 190 (253)
T 2nq2_C 144 ASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPN 190 (253)
T ss_dssp HTTCSEEEESSSSTTSCHHHHHHHHHHHHHHHHTSCCEEEEEESCHH
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH
Confidence 3899999999998764 4577778777665 777888877765
No 49
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=33.43 E-value=25 Score=30.07 Aligned_cols=40 Identities=18% Similarity=0.138 Sum_probs=28.1
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +.+..+|....+.|+.++++..|.+
T Consensus 160 ~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~ 204 (250)
T 2d2e_A 160 LEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHYQR 204 (250)
T ss_dssp HCCSEEEEECGGGTTCHHHHHHHHHHHHHHCSTTCEEEEECSSSG
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhcCCEEEEEecCHH
Confidence 789999999987764 3466666666555667777766654
No 50
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=32.93 E-value=43 Score=21.70 Aligned_cols=12 Identities=33% Similarity=0.672 Sum_probs=9.8
Q ss_pred HHHHHHHHHhhc
Q 023832 252 KEKLQERLAKLS 263 (276)
Q Consensus 252 ~~~L~eRla~L~ 263 (276)
..||+.||.+|.
T Consensus 32 q~KlKqRit~lE 43 (46)
T 3swy_A 32 QMKMKQRLSQLE 43 (46)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 688999998874
No 51
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=32.69 E-value=1.6e+02 Score=22.24 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHhCCCeEEEec-CccchHHHHHHHhcc-cccceeeEEeCCCCccCccchHHhHHhHhCCeEEecC
Q 023832 120 LTAVVRVLELALKRQRPLLIVAE-DVESEALATLILNKL-RAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITEE 194 (276)
Q Consensus 120 ~~~i~p~le~i~~~~~pLlIiae-~i~~~aL~~Lv~n~~-~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~~ 194 (276)
.+++...++.+...+.|++|..+ +.....++..+.+.. +....++ |.+..+.+. ......+..+-|++++-++
T Consensus 10 ~~~~~~~~~~~a~~~~~vll~G~~GtGKt~lA~~i~~~~~~~~~~~v-~~~~~~~~~-~~~~~~~~~a~~g~l~lde 84 (145)
T 3n70_A 10 INQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFV-YRELTPDNA-PQLNDFIALAQGGTLVLSH 84 (145)
T ss_dssp HHHHHHHHHHHTTCCSCEEEESSTTSSHHHHHHHHHHSSTTTTSCCE-EEECCTTTS-SCHHHHHHHHTTSCEEEEC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHHHhCCccCCCEE-EECCCCCcc-hhhhcHHHHcCCcEEEEcC
Confidence 34566666666778899999998 788888877666643 2234445 666555433 2333445556788887665
No 52
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=32.26 E-value=89 Score=27.17 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=16.6
Q ss_pred cCccchHHhHHhHhCCeEEec
Q 023832 173 ENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 173 ~~rk~~LedIA~~TGg~vi~~ 193 (276)
+...+.|+.||.+|||+.+.-
T Consensus 54 ~~~~~~L~~IA~~tGG~yf~a 74 (242)
T 3rag_A 54 EQGYQEAHSIADAGGGMCRIV 74 (242)
T ss_dssp TCCCHHHHHHHHHTTSCEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEe
Confidence 334578999999999998763
No 53
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=31.61 E-value=42 Score=25.48 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=44.6
Q ss_pred HHHHHHhCCCeEEEec-CccchHHHHHH-HhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEec
Q 023832 127 LELALKRQRPLLIVAE-DVESEALATLI-LNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 127 le~i~~~~~pLlIiae-~i~~~aL~~Lv-~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~ 193 (276)
|......=.|.+.|.. ++++..+.-+- .-+-+..++|=..+. .++.+++..+.||-.|||.+|..
T Consensus 10 LR~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELIKVkvl~~--~~~d~~e~a~~la~~t~a~vVq~ 76 (104)
T 1rq8_A 10 LRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQN--NFDDKKELAETLSEATRSELVQV 76 (104)
T ss_dssp HHHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEEEEECCC--CHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEEEEEeCC--CHHHHHHHHHHHHHHhCCEEEEE
Confidence 3433333469999988 88888877554 233445556645432 36778999999999999998855
No 54
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=30.88 E-value=40 Score=31.09 Aligned_cols=40 Identities=18% Similarity=0.459 Sum_probs=32.5
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHh-CCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKR-QRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~-~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. .+++.+|..+.+. |..+|++.-|.+
T Consensus 180 ~~P~lLLlDEPTs~LD~~~~~~i~~lL~~l~~~~g~Tii~vTHdl~ 225 (366)
T 3tui_C 180 SNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMD 225 (366)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHSCCEEEEEESCHH
T ss_pred cCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH
Confidence 799999999998764 4688888887654 888898888875
No 55
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=30.27 E-value=34 Score=21.60 Aligned_cols=15 Identities=40% Similarity=0.428 Sum_probs=11.9
Q ss_pred hHHHHHHHHHHhhcC
Q 023832 250 YDKEKLQERLAKLSG 264 (276)
Q Consensus 250 ~~~~~L~eRla~L~g 264 (276)
.+-+.+++||+.|.+
T Consensus 26 edi~~MqsRLaALRS 40 (40)
T 2xze_Q 26 EALEAMQSRLATLRS 40 (40)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcC
Confidence 457889999999853
No 56
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=29.81 E-value=81 Score=27.22 Aligned_cols=114 Identities=16% Similarity=0.207 Sum_probs=67.6
Q ss_pred CceEEEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCccC---ccchHHhHH
Q 023832 107 DPLILVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGEN---RKANMQDLA 183 (276)
Q Consensus 107 ~p~Ill~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~~---rk~~LedIA 183 (276)
+|- .+.|+ +.++.....++.+.+.|.|+||=..+++++-+..|..-.- ++.+|.+|-|.-- =...++..|
T Consensus 53 ~~D-VvIDF--T~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~----~~~vv~apNfSlGvnll~~l~~~aA 125 (228)
T 1vm6_A 53 SPD-VVIDF--SSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSK----EVPVVQAYNFSIGINVLKRFLSELV 125 (228)
T ss_dssp CCS-EEEEC--SCGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTT----TSEEEECSCCCHHHHHHHHHHHHHH
T ss_pred CCC-EEEEC--CCHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHh----hCCEEEeccccHHHHHHHHHHHHHH
Confidence 444 33453 5678899999999999999999888999887776655321 1567889988631 122455556
Q ss_pred hHhC---CeEEecCCCccccccC----------cccCceeeEEE---EeCCcEEEEcCCCC
Q 023832 184 VLTG---GDLITEELGMDLEKVN----------LDMLGTCKKVT---ISKDDTVILDGAGD 228 (276)
Q Consensus 184 ~~TG---g~vi~~~~g~~l~~~~----------~~~LG~a~~v~---v~~~~T~i~~g~g~ 228 (276)
.... -.++-.....++|-++ .+.+|- ..+. +-.++|+++.|.|+
T Consensus 126 ~~l~~ydiEIiE~HH~~K~DAPSGTAl~lae~i~~~I~i-~svR~g~ivg~H~V~F~~~gE 185 (228)
T 1vm6_A 126 KVLEDWDVEIVETHHRFKKDAPSGTAILLESALGKSVPI-HSLRVGGVPGDHVVVFGNIGE 185 (228)
T ss_dssp HHTTTSEEEEEEEECTTCCCSSCHHHHHHHHHTTSCCCE-EEEECTTCCCEEEEEEECSSE
T ss_pred HhcCCCCEEEEEcCCCCCCCCCCHHHHHHHHhcccCCCE-EEEECCCCcEEEEEEEeCCCc
Confidence 5552 2333333333444433 222221 1111 33667777777664
No 57
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=28.85 E-value=43 Score=30.51 Aligned_cols=41 Identities=22% Similarity=0.372 Sum_probs=32.5
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +++...|..+.+ .|..++++..|.+
T Consensus 143 ~~~P~lLLLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tii~vTHd~~ 189 (348)
T 3d31_A 143 VTNPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQT 189 (348)
T ss_dssp TSCCSEEEEESSSTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred HcCCCEEEEECccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 3899999999999875 457777877765 4788888888875
No 58
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=28.44 E-value=58 Score=23.07 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=21.5
Q ss_pred HhCCCeEEEecCccchHHHHHHHhcccccceeeEE
Q 023832 132 KRQRPLLIVAEDVESEALATLILNKLRAGIKVCAI 166 (276)
Q Consensus 132 ~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aV 166 (276)
+...-|+|||+|++++....|..-=....++++-+
T Consensus 25 ~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 25 RGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp TTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34468999999999876655543222233455555
No 59
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=28.33 E-value=46 Score=30.29 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=32.3
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +++...|..+.+ .|..++++..|.+
T Consensus 157 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~ 202 (353)
T 1oxx_K 157 KDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPA 202 (353)
T ss_dssp TCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHH
T ss_pred hCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 899999999998775 457787877754 4888998888875
No 60
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=27.71 E-value=53 Score=23.47 Aligned_cols=13 Identities=38% Similarity=0.693 Sum_probs=10.1
Q ss_pred HHHHHHHHHhhcC
Q 023832 252 KEKLQERLAKLSG 264 (276)
Q Consensus 252 ~~~L~eRla~L~g 264 (276)
..||+.||.+|-.
T Consensus 34 Q~KLKqRit~LE~ 46 (74)
T 3swf_A 34 QQKLKQRLTKVEK 46 (74)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5889999888753
No 61
>1f2t_B RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_B* 1us8_B*
Probab=27.28 E-value=53 Score=25.90 Aligned_cols=39 Identities=18% Similarity=0.361 Sum_probs=28.4
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDV 144 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i 144 (276)
.+|.++++|.+.+.. +.+..++....+.|+.++++..+.
T Consensus 80 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~ 123 (148)
T 1f2t_B 80 GEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDE 123 (148)
T ss_dssp SSCSEEEEESCSCTTCHHHHHHHHHHHHHTGGGSSEEEEEESCG
T ss_pred CCCCEEEEECCCccCCHHHHHHHHHHHHHHHccCCEEEEEEChH
Confidence 689999999988765 346666666655566777777775
No 62
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=27.23 E-value=21 Score=29.37 Aligned_cols=46 Identities=24% Similarity=0.424 Sum_probs=27.6
Q ss_pred eEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhC
Q 023832 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQ 134 (276)
Q Consensus 82 G~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~ 134 (276)
|+.+++ ...||+- ..-.++.+++|||= .-..+..++.+||.+++.-
T Consensus 20 G~SYe~-LFg~YL~--~~~~~I~IeDPYIR----~~hQi~NfvrF~Ellvk~~ 65 (163)
T 4a5z_A 20 GFSYES-LFREYLN--ETVTEVWIEDPYIR----HTHQLYNFLRFCEMLIKRP 65 (163)
T ss_dssp CCCHHH-HHGGGCC--TTCCEEEEECSCCC----SHHHHHHHHHHHHHHHC--
T ss_pred cccHHH-HHHHHHh--CCceEEEEECCccc----cHHHHHHHHHHHHHHHhcC
Confidence 444554 3478873 12346777888863 2234566888899988763
No 63
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=26.93 E-value=50 Score=30.39 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=31.9
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHh-CCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKR-QRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~-~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +++...|..+.+. |..++++..|.+
T Consensus 158 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~ 203 (372)
T 1v43_A 158 VEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQV 203 (372)
T ss_dssp TCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 899999999999875 3577777777554 888888888865
No 64
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=26.92 E-value=63 Score=24.10 Aligned_cols=65 Identities=14% Similarity=0.112 Sum_probs=43.6
Q ss_pred HHHHHHhCCCeEEEec-CccchHHHHHH-HhcccccceeeEEeCCCCccCccchHHhHHhHhCCeEEec
Q 023832 127 LELALKRQRPLLIVAE-DVESEALATLI-LNKLRAGIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 127 le~i~~~~~pLlIiae-~i~~~aL~~Lv-~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~ 193 (276)
|......=.|.+-|.. ++++..+.-+- .-.-+..++|=+-+ ...+.+++..+.||-.|||.+|..
T Consensus 11 Lr~~ah~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~--~~~~~~~e~a~~la~~t~a~~Vq~ 77 (98)
T 1jo0_A 11 LKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAG--ADRETKQLIINAIVRETKAAQVQT 77 (98)
T ss_dssp HHHHHTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETT--CCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCeEEEEEeC--CCHHHHHHHHHHHHHHhCCEEEEE
Confidence 4444444469999988 88888777543 22333445554432 235678899999999999998865
No 65
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=26.90 E-value=47 Score=30.38 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=31.9
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +++...|..+.+ .|..++++.-|.+
T Consensus 161 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~ 207 (355)
T 1z47_A 161 APRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQE 207 (355)
T ss_dssp TTCCSEEEEESTTCCSSHHHHHHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEECCCHH
Confidence 3899999999999875 357777777654 4888888877765
No 66
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=26.62 E-value=51 Score=30.27 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=31.7
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +++...|..+.+ .|..++++..|.+
T Consensus 156 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~ 201 (372)
T 1g29_1 156 RKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQV 201 (372)
T ss_dssp TCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred cCCCEEEECCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEECCCHH
Confidence 899999999999875 347777777654 4888888888865
No 67
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=26.56 E-value=52 Score=30.12 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=32.2
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
+.+|.+|++|.+.+.. +++...|..+.+ .|..++++..|.+
T Consensus 149 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~ 195 (359)
T 2yyz_A 149 VKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQA 195 (359)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHH
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH
Confidence 3899999999999875 357777777654 4888888888865
No 68
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=26.23 E-value=41 Score=28.67 Aligned_cols=41 Identities=20% Similarity=0.379 Sum_probs=31.2
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
+.+|.++++|.+.+.. +.+..+|....+ .|+.++++..|.+
T Consensus 142 ~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~~g~tvi~vtHd~~ 188 (240)
T 2onk_A 142 VIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLI 188 (240)
T ss_dssp TTCCSSBEEESTTSSCCHHHHHHHHHHHHHHHHHHTCCEEEEESCHH
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 3889999999988764 357777777654 4788888887765
No 69
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=26.13 E-value=27 Score=30.25 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=27.3
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +.+..+|....+.|+.++++.-|.+
T Consensus 181 ~~p~lLlLDEPts~LD~~~~~~l~~~l~~l~~~g~tviivtHd~~ 225 (267)
T 2zu0_C 181 LEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQR 225 (267)
T ss_dssp HCCSEEEEESTTTTCCHHHHHHHHHHHHTTCCSSCEEEEECSSGG
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeeCHH
Confidence 789999999987764 3455556555444666777766764
No 70
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=25.95 E-value=60 Score=27.69 Aligned_cols=40 Identities=23% Similarity=0.490 Sum_probs=29.6
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
+.+|.++++|.+.+.. +.+..+|.... .|+.+++++-|.+
T Consensus 161 ~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~-~g~tviivtH~~~ 205 (247)
T 2ff7_A 161 VNNPKILIFDEATSALDYESEHVIMRNMHKIC-KGRTVIIIAHRLS 205 (247)
T ss_dssp TTCCSEEEECCCCSCCCHHHHHHHHHHHHHHH-TTSEEEEECSSGG
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH
Confidence 3789999999988765 34777777763 4777777777765
No 71
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=25.17 E-value=49 Score=30.31 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=32.1
Q ss_pred ecCceEEEecccCCcH-----HHHHHHHHHHHH-hCCCeEEEecCcc
Q 023832 105 LEDPLILVHEKKISNL-----TAVVRVLELALK-RQRPLLIVAEDVE 145 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~-----~~i~p~le~i~~-~~~pLlIiae~i~ 145 (276)
..+|.+|++|.+.+.. +++...|..+.+ .|..++++..|.+
T Consensus 149 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tvi~vTHd~~ 195 (362)
T 2it1_A 149 VKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQA 195 (362)
T ss_dssp TTCCSEEEEESGGGGSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHH
T ss_pred HcCCCEEEEECccccCCHHHHHHHHHHHHHHHHhCCCEEEEECCCHH
Confidence 3899999999998875 457777877754 4888888888864
No 72
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=24.74 E-value=23 Score=31.23 Aligned_cols=46 Identities=24% Similarity=0.424 Sum_probs=26.7
Q ss_pred eEEEeeeccCcccccccccceeeecCceEEEecccCCcHHHHHHHHHHHHHhC
Q 023832 82 GMKLDRGYISPYFITNQKNQKCELEDPLILVHEKKISNLTAVVRVLELALKRQ 134 (276)
Q Consensus 82 G~~fd~gy~spyfvt~~~~~~~~l~~p~Ill~d~~i~~~~~i~p~le~i~~~~ 134 (276)
|+.+++ ...||+- ..-..+.+++|||= .-..+..++.+||.+++.-
T Consensus 108 G~sY~~-lFg~yl~--~~~~~i~i~DPYir----~~hQ~~Nl~~f~E~~vk~~ 153 (257)
T 2ymb_A 108 GFSYES-LFREYLN--ETVTEVWIEDPYIR----HTHQLYNFLRFCEMLIKRP 153 (257)
T ss_dssp SCCHHH-HSSTTCS--TTCCEEEEECSCCC----SHHHHHHHHHHHHHHTC--
T ss_pred cccHHH-HHHHHHh--cCCeEEEEeCceec----chHHHHHHHHHHHHHhhcc
Confidence 444553 4478872 22245777888864 2233556888888887643
No 73
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=24.64 E-value=87 Score=26.95 Aligned_cols=60 Identities=13% Similarity=0.136 Sum_probs=38.9
Q ss_pred EEecccCCcHHHHHHHHHHHHHhCCCeEEEecCccchHHHHHHHhcccccceeeEEeCCCCcc
Q 023832 111 LVHEKKISNLTAVVRVLELALKRQRPLLIVAEDVESEALATLILNKLRAGIKVCAIKAPGFGE 173 (276)
Q Consensus 111 ll~d~~i~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~~Lv~n~~~g~~~v~aVkaP~~g~ 173 (276)
++.|+. +++...+.++.+.+.|.|++|-+.+++++-+..|...--+. -.+-.+.+|.|+.
T Consensus 48 vvIDfT--~p~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~-~~~~vv~a~N~si 107 (245)
T 1p9l_A 48 VVIDFT--HPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAK-PNTSVLIAPNFAI 107 (245)
T ss_dssp EEEECS--CTTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTS-TTCEEEECSCCCH
T ss_pred EEEEcc--ChHHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhC-CCCCEEEECCccH
Confidence 445543 56678888999999999999888788887665554321100 0123567888764
No 74
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=24.17 E-value=76 Score=29.04 Aligned_cols=45 Identities=24% Similarity=0.339 Sum_probs=32.0
Q ss_pred ecCceEEEecccCCcHH-----HHHHHHHHH-HHhCCCeEEEecCccchHHH
Q 023832 105 LEDPLILVHEKKISNLT-----AVVRVLELA-LKRQRPLLIVAEDVESEALA 150 (276)
Q Consensus 105 l~~p~Ill~d~~i~~~~-----~i~p~le~i-~~~~~pLlIiae~i~~~aL~ 150 (276)
..+|.+|++|.+.+..+ ++...+... .+.|..++++.-|.+ +|+.
T Consensus 154 ~~~P~lLLLDEPts~LD~~~r~~l~~~l~~~~~~~g~tvi~vTHd~~-ea~~ 204 (359)
T 3fvq_A 154 APDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDRE-EALQ 204 (359)
T ss_dssp TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHTTCEEEEECCCHH-HHHH
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHH
Confidence 37999999999998753 465544443 456888888888876 4443
No 75
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=23.94 E-value=73 Score=24.48 Aligned_cols=23 Identities=9% Similarity=0.149 Sum_probs=14.6
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHh
Q 023832 220 TVILDGAGDKKSIEERCEQIRSAIEN 245 (276)
Q Consensus 220 T~i~~g~g~~~~i~~r~~~l~~~~~~ 245 (276)
++-+-..|+ .++.++.++..+++
T Consensus 98 ~vaI~d~~~---~~~~~~~~~~~i~~ 120 (122)
T 3o85_A 98 VASIGKHDA---LGNVVAEIVGKVEA 120 (122)
T ss_dssp EEEECCCTT---THHHHHHHHHHHHT
T ss_pred EEEEEcccc---hHHHHHHHHHHHHh
Confidence 344444454 67777888877764
No 76
>3czq_A Putative polyphosphate kinase 2; structural genomics, APC6299, PSI-2, structure initiative; HET: MSE GOL; 2.23A {Sinorhizobium meliloti}
Probab=23.90 E-value=1.1e+02 Score=27.58 Aligned_cols=64 Identities=17% Similarity=0.134 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCeEEEecCccch----HHHHHHHhcccccceeeEEeCCCCccCccchHHhHHhHh
Q 023832 123 VVRVLELALKRQRPLLIVAEDVESE----ALATLILNKLRAGIKVCAIKAPGFGENRKANMQDLAVLT 186 (276)
Q Consensus 123 i~p~le~i~~~~~pLlIiae~i~~~----aL~~Lv~n~~~g~~~v~aVkaP~~g~~rk~~LedIA~~T 186 (276)
+..+-..+.+.|+|++|+=|++++- ....|..+=-.-.++|++.+.|+-.+.+..+++++....
T Consensus 73 L~~lQ~~~~~~~~~vlIvfEG~DgAGKgt~Ik~L~e~Ldprg~~V~~~~~Pt~eE~~~~yl~R~~~~L 140 (304)
T 3czq_A 73 LVKVQFWMQATGKRVMAVFEGRDAAGKGGAIHATTANMNPRSARVVALTKPTETERGQWYFQRYVATF 140 (304)
T ss_dssp HHHHHHHHHHHCCCEEEEEEESTTSSHHHHHHHHHTTSCTTTEEEEECCSCCHHHHTSCTTHHHHTTC
T ss_pred HHHHHHHHHHcCCCeEEEEeCCCCCCHHHHHHHHHHHhcccCCeEEEeCCcChHHHhchHHHHHHHhc
Confidence 5555555667899999999977543 333333332234678999999998888888888876654
No 77
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=23.72 E-value=72 Score=27.57 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=30.3
Q ss_pred CceEEEecccCCcH-----HHHHHHHHHHHHhC-CCeEEEecCcc
Q 023832 107 DPLILVHEKKISNL-----TAVVRVLELALKRQ-RPLLIVAEDVE 145 (276)
Q Consensus 107 ~p~Ill~d~~i~~~-----~~i~p~le~i~~~~-~pLlIiae~i~ 145 (276)
+|.+|++|.+.+.. .+++.+|..+.+.+ ..++++..|.+
T Consensus 165 ~p~lLllDEPts~LD~~~~~~i~~~l~~l~~~~~~tvi~vtHdl~ 209 (266)
T 4g1u_C 165 TPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLN 209 (266)
T ss_dssp CCEEEEECCCCSSCCHHHHHHHHHHHHHHHHHSSEEEEEECSCHH
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCCEEEEEEcCHH
Confidence 89999999998764 45788888776664 57778777875
No 78
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=23.40 E-value=60 Score=27.89 Aligned_cols=39 Identities=28% Similarity=0.459 Sum_probs=20.2
Q ss_pred cCceEEEecccCCcH-----HHHHHHHHHHHHhCCCeEEEecCcc
Q 023832 106 EDPLILVHEKKISNL-----TAVVRVLELALKRQRPLLIVAEDVE 145 (276)
Q Consensus 106 ~~p~Ill~d~~i~~~-----~~i~p~le~i~~~~~pLlIiae~i~ 145 (276)
.+|.+|++|.+.+.. +.+..+|....+ ++.+++++.|.+
T Consensus 172 ~~p~lllLDEPts~LD~~~~~~i~~~l~~l~~-~~tviivtH~~~ 215 (260)
T 2ghi_A 172 KDPKIVIFDEATSSLDSKTEYLFQKAVEDLRK-NRTLIIIAHRLS 215 (260)
T ss_dssp HCCSEEEEECCCCTTCHHHHHHHHHHHHHHTT-TSEEEEECSSGG
T ss_pred cCCCEEEEECccccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH
Confidence 566677777666554 234444444432 445555544443
No 79
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.49 E-value=1.1e+02 Score=22.36 Aligned_cols=33 Identities=6% Similarity=0.262 Sum_probs=25.4
Q ss_pred CcHHHHHHHHHHHHHhCCCeEEEecCccchHHH
Q 023832 118 SNLTAVVRVLELALKRQRPLLIVAEDVESEALA 150 (276)
Q Consensus 118 ~~~~~i~p~le~i~~~~~pLlIiae~i~~~aL~ 150 (276)
.+.++|-.+++.....|+||+++-.+-+..-..
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvn 67 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVN 67 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHH
Confidence 456788888999999999999987766544333
No 80
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=21.32 E-value=1.1e+02 Score=23.57 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=23.5
Q ss_pred cceeeEEeCCCCccCccchHHhHHhHhCCeEEec
Q 023832 160 GIKVCAIKAPGFGENRKANMQDLAVLTGGDLITE 193 (276)
Q Consensus 160 ~~~v~aVkaP~~g~~rk~~LedIA~~TGg~vi~~ 193 (276)
.+.+.+| |+|+.....|+.||-.+|+.....
T Consensus 134 ~i~i~~i---gvg~~~~~~L~~ia~~~~~~~~~~ 164 (182)
T 1shu_X 134 GASVYCV---GVLDFEQAQLERIADSKEQVFPVK 164 (182)
T ss_dssp TCEEEEE---ECSSCCHHHHHHHSSSGGGEEESS
T ss_pred CCEEEEE---eCCcCCHHHHHHHhCCCCceEEcc
Confidence 4566666 567888899999999998876544
Done!