Query 023838
Match_columns 276
No_of_seqs 159 out of 1598
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 13:37:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023838.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023838hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 3.7E-47 1.3E-51 350.6 22.8 251 25-276 13-265 (418)
2 3io1_A Aminobenzoyl-glutamate 100.0 1.6E-45 5.5E-50 342.3 24.0 245 27-276 3-295 (445)
3 1ysj_A Protein YXEP; M20 famil 100.0 1.6E-44 5.5E-49 331.6 26.0 240 36-276 30-271 (404)
4 3pfo_A Putative acetylornithin 100.0 1.7E-42 5.7E-47 320.6 26.8 248 18-276 6-293 (433)
5 3ram_A HMRA protein; two-domai 100.0 1.9E-40 6.5E-45 303.7 21.1 227 25-276 3-236 (394)
6 1cg2_A Carboxypeptidase G2; me 100.0 3E-40 1E-44 302.0 20.0 241 24-276 5-259 (393)
7 3ct9_A Acetylornithine deacety 100.0 8.2E-40 2.8E-44 295.6 22.2 225 33-276 6-243 (356)
8 1vgy_A Succinyl-diaminopimelat 100.0 4.4E-39 1.5E-43 294.3 21.7 235 38-276 6-254 (393)
9 3isz_A Succinyl-diaminopimelat 100.0 1.7E-38 5.9E-43 288.1 23.6 236 37-276 2-251 (377)
10 3dlj_A Beta-Ala-His dipeptidas 100.0 5.8E-38 2E-42 294.4 24.9 249 23-276 10-347 (485)
11 3tx8_A Succinyl-diaminopimelat 100.0 1.5E-38 5.2E-43 288.3 18.3 227 37-276 12-249 (369)
12 3pfe_A Succinyl-diaminopimelat 100.0 1.1E-37 3.9E-42 291.5 21.4 244 27-276 6-334 (472)
13 2pok_A Peptidase, M20/M25/M40 100.0 2E-37 6.9E-42 290.4 20.8 214 27-244 32-266 (481)
14 2rb7_A Peptidase, M20/M25/M40 100.0 2.8E-37 9.5E-42 279.8 19.3 221 37-276 5-245 (364)
15 2f7v_A Aectylcitrulline deacet 100.0 4E-37 1.4E-41 279.2 19.3 222 32-276 3-244 (369)
16 2zog_A Cytosolic non-specific 100.0 2.2E-36 7.6E-41 283.0 24.0 245 26-276 8-340 (479)
17 3rza_A Tripeptidase; phosphory 100.0 1E-36 3.5E-41 278.9 20.2 233 27-276 13-264 (396)
18 3gb0_A Peptidase T; NP_980509. 100.0 7.2E-36 2.5E-40 271.1 22.0 222 37-276 5-244 (373)
19 3khx_A Putative dipeptidase sa 100.0 1E-34 3.5E-39 272.7 23.1 235 24-265 20-361 (492)
20 3ife_A Peptidase T; metallopep 100.0 1.9E-35 6.5E-40 273.7 17.3 222 36-276 25-300 (434)
21 3mru_A Aminoacyl-histidine dip 100.0 4.1E-34 1.4E-38 268.5 19.7 219 37-276 13-266 (490)
22 1fno_A Peptidase T; metallo pe 100.0 1.6E-33 5.5E-38 259.3 18.9 215 38-265 2-269 (417)
23 2qyv_A XAA-His dipeptidase; YP 100.0 1.7E-32 5.6E-37 257.4 23.8 221 37-276 10-265 (487)
24 1z2l_A Allantoate amidohydrola 100.0 4.5E-32 1.5E-36 250.1 22.1 225 31-276 2-283 (423)
25 2v8h_A Beta-alanine synthase; 100.0 4.8E-32 1.6E-36 253.5 18.5 220 36-276 30-314 (474)
26 3n5f_A L-carbamoylase, N-carba 100.0 4.5E-31 1.5E-35 242.4 24.7 218 37-276 4-279 (408)
27 1lfw_A PEPV; hydrolase, dipept 100.0 7.5E-31 2.6E-35 244.9 25.7 209 29-242 5-291 (470)
28 1q7l_A Aminoacylase-1; catalys 100.0 3.5E-28 1.2E-32 202.1 12.4 170 37-211 9-197 (198)
29 4h2k_A Succinyl-diaminopimelat 99.9 5.2E-27 1.8E-31 204.0 16.3 150 37-187 5-167 (269)
30 3t68_A Succinyl-diaminopimelat 99.9 1.1E-26 3.8E-31 201.7 13.2 150 37-187 5-167 (268)
31 2fvg_A Endoglucanase; TM1049, 99.8 9.3E-21 3.2E-25 169.8 8.9 161 43-232 3-245 (340)
32 2gre_A Deblocking aminopeptida 99.8 3.9E-19 1.3E-23 159.7 12.8 142 37-187 5-242 (349)
33 1tkj_A Aminopeptidase, SGAP; d 99.8 1.1E-18 3.9E-23 152.4 10.8 136 37-186 6-160 (284)
34 1vhe_A Aminopeptidase/glucanas 99.8 5E-18 1.7E-22 153.9 14.9 144 38-187 7-240 (373)
35 2wyr_A Cobalt-activated peptid 99.8 4.5E-18 1.5E-22 151.7 13.3 137 40-187 4-229 (332)
36 1rtq_A Bacterial leucyl aminop 99.7 1E-17 3.6E-22 147.3 11.9 153 22-185 6-178 (299)
37 1y0y_A FRV operon protein FRVX 99.7 1E-16 3.5E-21 144.1 12.5 136 40-187 8-236 (353)
38 3tc8_A Leucine aminopeptidase; 99.7 4.1E-15 1.4E-19 131.2 17.4 143 38-186 25-200 (309)
39 1vho_A Endoglucanase; structur 99.7 8.5E-16 2.9E-20 137.7 13.2 144 38-187 5-228 (346)
40 2wzn_A TET3, 354AA long hypoth 99.6 7.4E-19 2.5E-23 154.8 -7.5 185 41-241 12-200 (354)
41 1ylo_A Hypothetical protein SF 99.6 3.8E-15 1.3E-19 133.4 15.3 140 42-187 7-225 (348)
42 3gux_A Putative Zn-dependent e 99.6 1.1E-14 3.9E-19 128.5 15.8 144 37-186 26-203 (314)
43 2afw_A Glutaminyl-peptide cycl 99.6 7.3E-15 2.5E-19 130.9 12.7 127 37-173 30-190 (329)
44 3cpx_A Aminopeptidase, M42 fam 99.5 5.8E-15 2E-19 131.1 7.6 139 37-187 16-219 (321)
45 3kl9_A PEPA, glutamyl aminopep 99.4 1.8E-12 6.1E-17 116.3 15.7 143 39-187 4-238 (355)
46 4fuu_A Leucine aminopeptidase; 99.3 3.6E-11 1.2E-15 106.0 16.3 143 37-185 24-200 (309)
47 2vpu_A TET3, 354AA long hypoth 99.3 8.4E-12 2.9E-16 111.9 11.4 67 39-107 10-77 (354)
48 4fai_A CG5976, isoform B; alph 99.3 6.2E-11 2.1E-15 105.4 15.7 135 38-186 38-204 (330)
49 4f9u_A CG32412; alpha/beta hyd 99.3 4.3E-11 1.5E-15 105.6 14.1 123 40-173 13-163 (312)
50 3pb6_X Glutaminyl-peptide cycl 99.3 1.8E-11 6E-16 108.7 11.5 124 38-173 39-194 (330)
51 3isx_A Endoglucanase; TM1050, 99.2 4.4E-11 1.5E-15 106.6 11.5 66 39-106 12-77 (343)
52 2ek8_A Aminopeptidase; metallo 98.8 1E-08 3.5E-13 94.0 9.2 99 59-173 172-285 (421)
53 3iib_A Peptidase M28; YP_92679 98.8 1.7E-08 5.7E-13 93.2 9.6 102 58-174 203-317 (444)
54 3fed_A Glutamate carboxypeptid 98.3 1.6E-06 5.3E-11 84.0 8.4 77 81-173 312-394 (707)
55 3kas_A Transferrin receptor pr 98.2 2.2E-06 7.4E-11 82.2 8.2 78 81-174 266-350 (640)
56 3k9t_A Putative peptidase; str 91.8 0.7 2.4E-05 41.6 8.7 67 85-173 169-237 (435)
57 2hc9_A Leucine aminopeptidase 88.3 15 0.00051 33.7 14.6 111 38-162 167-307 (491)
58 1y7e_A Probable M18-family ami 85.8 0.61 2.1E-05 42.7 4.0 48 57-106 35-100 (458)
59 3h8g_F Cytosol aminopeptidase; 85.5 22 0.00075 32.7 14.6 116 38-162 180-322 (497)
60 1lam_A Leucine aminopeptidase; 85.2 15 0.0005 33.7 12.8 111 38-162 161-305 (484)
61 3jru_B Probable cytosol aminop 85.1 16 0.00054 33.6 12.9 111 38-162 176-317 (490)
62 3ij3_A Cytosol aminopeptidase; 85.0 17 0.00059 33.1 13.1 118 38-162 167-305 (482)
63 1gyt_A Cytosol aminopeptidase; 84.5 25 0.00085 32.4 14.8 112 37-162 180-325 (503)
64 3fed_A Glutamate carboxypeptid 84.1 2.1 7.4E-05 41.3 7.2 53 23-77 12-67 (707)
65 3kzw_A Cytosol aminopeptidase; 84.0 17 0.00057 33.5 12.6 111 38-162 197-338 (515)
66 4efd_A Aminopeptidase; structu 83.9 20 0.00069 33.0 13.0 111 38-162 204-345 (522)
67 2ijz_A Probable M18-family ami 83.8 0.36 1.2E-05 43.8 1.5 60 46-105 7-85 (428)
68 3pei_A Cytosol aminopeptidase; 83.5 15 0.00052 33.6 12.1 111 38-162 164-306 (486)
69 2glf_A Probable M18-family ami 82.9 2.2 7.4E-05 38.9 6.3 50 56-105 32-96 (450)
70 3kr4_A M17 leucyl aminopeptida 81.2 26 0.0009 32.3 12.8 119 38-162 205-349 (528)
71 2ek8_A Aminopeptidase; metallo 68.7 4 0.00014 36.6 4.0 40 38-77 16-57 (421)
72 3iib_A Peptidase M28; YP_92679 65.8 7.2 0.00025 35.3 5.1 56 21-77 5-65 (444)
73 2glj_A Probable M18-family ami 60.6 1.3 4.5E-05 40.5 -0.9 47 59-105 39-105 (461)
74 3kas_A Transferrin receptor pr 49.7 19 0.00064 34.3 5.1 51 23-75 5-60 (640)
75 2ijz_A Probable M18-family ami 42.4 8.8 0.0003 34.6 1.5 45 121-170 227-274 (428)
76 1y7e_A Probable M18-family ami 41.6 7.7 0.00026 35.4 1.0 41 121-164 247-289 (458)
77 2glj_A Probable M18-family ami 41.3 15 0.00052 33.4 2.9 39 122-164 254-294 (461)
78 2glf_A Probable M18-family ami 34.3 29 0.00098 31.5 3.5 38 122-164 242-281 (450)
79 3v4g_A Arginine repressor; vib 22.6 77 0.0026 24.8 3.6 34 37-75 31-64 (180)
80 3tuf_A Stage III sporulation p 22.3 2.9E+02 0.01 21.8 7.7 35 23-57 82-116 (197)
81 2qsb_A UPF0147 protein TA0600; 21.9 1.6E+02 0.0055 20.1 4.7 39 36-74 11-49 (89)
82 3vat_A Dnpep, aspartyl aminope 20.2 2.4E+02 0.0081 25.8 6.9 51 55-105 50-119 (496)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=3.7e-47 Score=350.62 Aligned_cols=251 Identities=55% Similarity=0.893 Sum_probs=205.4
Q ss_pred HHHHHHHHHHhhH--HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeecc
Q 023838 25 LTNQVMISAQQDK--DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADM 102 (276)
Q Consensus 25 ~~~~i~~~i~~~~--~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~ 102 (276)
+++++.+++++++ +++++++++|++|||+|++|.++++||.++|+++|+++++.+.++|+++++++++.|+|+|++|+
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~ 92 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM 92 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence 5566888899999 99999999999999999999999999999999999999876557899999975422899999999
Q ss_pred ccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccccHHHHHHcCCCCCCcEE
Q 023838 103 DALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAI 182 (276)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~g~~~~~~~~~~~~~d~~ 182 (276)
||||.+++..|+|.+..+|++||||+|+++++++++++.|++.+.+++++|.|+|+++||++.|++++++++.++++|++
T Consensus 93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~ 172 (418)
T 1xmb_A 93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI 172 (418)
T ss_dssp CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence 99999888889998888999999999999999999999999987778999999999999944899999998877668999
Q ss_pred EEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEE
Q 023838 183 FGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVCLSLLL 262 (276)
Q Consensus 183 i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i 262 (276)
+.+|.++++|++.+....+.+++|..+++|+++|+++|+|.|+.|+||+..+++++..|+++..++.++...+++++|.|
T Consensus 173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i 252 (418)
T 1xmb_A 173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV 252 (418)
T ss_dssp EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEE
T ss_pred EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEE
Confidence 99988777788876666677788999999999999999999999999999999999999887544444445679999999
Q ss_pred EeeCCccccCCCCC
Q 023838 263 SIYSETCELLPLKA 276 (276)
Q Consensus 263 ~~g~~~~nvIP~~a 276 (276)
+|| .+.|+||++|
T Consensus 253 ~gG-~~~NvIP~~a 265 (418)
T 1xmb_A 253 NGG-NAFNVIPDSI 265 (418)
T ss_dssp C---------CCEE
T ss_pred Eec-CcCCcCCCeE
Confidence 998 7999999975
No 2
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.6e-45 Score=342.27 Aligned_cols=245 Identities=30% Similarity=0.455 Sum_probs=199.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc---------------------------
Q 023838 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV--------------------------- 79 (276)
Q Consensus 27 ~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~--------------------------- 79 (276)
.++.++++++++++++++++|+++||++++|.++++||.++|+++|+++++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (445)
T 3io1_A 3 LQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAREQ 82 (445)
T ss_dssp CCHHHHHHTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhccc
Confidence 45778899999999999999999999999999999999999999999987632
Q ss_pred ------------CCceEEEEEcCC-CCceEEEeeccccCCCcCCCCCcccc-------ccCCeeecCCccHHHHHHHHHH
Q 023838 80 ------------AKTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWEHKS-------KIDGKMHACGHDVHTTMLLGAA 139 (276)
Q Consensus 80 ------------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~~~~-------~~~g~l~g~G~kg~~a~~l~a~ 139 (276)
+++|++++++++ ++|+|+|++||||||+++..+|+++| ..+|++||||+|++++++++++
T Consensus 83 g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa 162 (445)
T 3io1_A 83 GAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLA 162 (445)
T ss_dssp TCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHH
T ss_pred cccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHH
Confidence 568999999765 57999999999999998888896543 4579999999999999999999
Q ss_pred HHHHhccCCCCceEEEEEecCCCccccHHHHHHcCCCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCC
Q 023838 140 KLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGG 219 (276)
Q Consensus 140 ~~l~~~~~~~~~~v~~~~~~dEE~g~g~~~~~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~ 219 (276)
+.|++.+.+++++|.|+|+++||++.|++.|+++|.++++|+++++|+.++.|.|.+.+..+. ..+..+++|+++|+++
T Consensus 163 ~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g-~~a~~~~~i~v~Gk~~ 241 (445)
T 3io1_A 163 HVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDN-FMATTKFDVQFSGVAA 241 (445)
T ss_dssp HHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCC-BCEEEEEEEEEECCCS
T ss_pred HHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCC-eeEEEEEEEEEEeecC
Confidence 999988778999999999999998799999999998888999999998766677766543221 1245799999999999
Q ss_pred Cc-CCCCCCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 220 HA-AMPHSTIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 220 Hs-~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
|+ +.|+.|+||+..+++++..|+++. ++.+ +.+++++|.|+|| .+.|+||++|
T Consensus 242 HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG-~~~NvIP~~a 295 (445)
T 3io1_A 242 HAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAG-TGRNVVPSSA 295 (445)
T ss_dssp STTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEEC-SCTTSCCCEE
T ss_pred CCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecC-CCCceeCCeE
Confidence 98 599999999999999999999873 2222 3688999999998 7999999975
No 3
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.6e-44 Score=331.64 Aligned_cols=240 Identities=42% Similarity=0.700 Sum_probs=195.2
Q ss_pred hHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-CCceEEEEEcCC-CCceEEEeeccccCCCcCCCCC
Q 023838 36 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-AKTGIVAQIGSG-SRPVVVLRADMDALPLQELVEW 113 (276)
Q Consensus 36 ~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~w 113 (276)
.++++++++++|++|||+|++|.++++||.++|+++|++++.+. +++|+++++++. ++|+|+|++|+||||.+++..+
T Consensus 30 ~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~ 109 (404)
T 1ysj_A 30 FHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNL 109 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCC
Confidence 45789999999999999999999999999999999999886542 467999999654 4699999999999999876666
Q ss_pred ccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccccHHHHHHcCCCCCCcEEEEEeccCCCCc
Q 023838 114 EHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPT 193 (276)
Q Consensus 114 ~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~g~~~~~~~~~~~~~d~~i~~~~~~~~p~ 193 (276)
||.+..+|++||||+|+++++++++++.|++.+..++++|.|+|+++||.+.|++++++++.++++|+++++|.+|+.+.
T Consensus 110 Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~ 189 (404)
T 1ysj_A 110 PFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPV 189 (404)
T ss_dssp TTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCT
T ss_pred CcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCC
Confidence 77777789999999999999999999999987777899999999999999889999999887777899999887776666
Q ss_pred ccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEeeCCccccCC
Q 023838 194 GSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIYSETCELLP 273 (276)
Q Consensus 194 ~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP 273 (276)
+.+....|..++|..+++|+++|+++||+.|+.|+||+..+++++..|+++..+..++...++++++.|+|| .+.|+||
T Consensus 190 g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG-~~~NvIP 268 (404)
T 1ysj_A 190 GTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAG-TSWNVIP 268 (404)
T ss_dssp TEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEEC-SCSSSCC
T ss_pred ceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcC-CCCceec
Confidence 765554454467899999999999999999999999999999999999887555445556789999999997 7999999
Q ss_pred CCC
Q 023838 274 LKA 276 (276)
Q Consensus 274 ~~a 276 (276)
++|
T Consensus 269 ~~a 271 (404)
T 1ysj_A 269 DQA 271 (404)
T ss_dssp SEE
T ss_pred Cce
Confidence 975
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.7e-42 Score=320.64 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=210.2
Q ss_pred ccchhHHHHHHHHHHHHhhHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeec-------------------
Q 023838 18 TTAVDEILTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP------------------- 78 (276)
Q Consensus 18 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~------------------- 78 (276)
|.+.+..+++++.++++++++++++++++|+++||+|++|.++++||.++|+++|+++++.
T Consensus 6 ~~~~~~~~~~~i~~~i~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
T 3pfo_A 6 TLTKSDAITQSLRAAVDRNFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTI 85 (433)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTC
T ss_pred ccccCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccc
Confidence 3445667889999999999999999999999999999999999999999999999988642
Q ss_pred --cCCceEEEEEcCC-CCceEEEeeccccCCCcCCCCCcc---cc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCC
Q 023838 79 --VAKTGIVAQIGSG-SRPVVVLRADMDALPLQELVEWEH---KS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDK 148 (276)
Q Consensus 79 --~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~~---~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~ 148 (276)
++++|++++++++ ++|+|+|++||||||.++...|.. .+ ..+|++||||+ |+++++++++++.|++.+.+
T Consensus 86 ~~~~~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~ 165 (433)
T 3pfo_A 86 DPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYA 165 (433)
T ss_dssp CGGGCEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEE
T ss_pred cCCCCcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCC
Confidence 3568999999754 569999999999999987777864 43 56899999987 89999999999999988777
Q ss_pred CCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCC
Q 023838 149 LKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHST 227 (276)
Q Consensus 149 ~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g 227 (276)
++++|.|+|+++||.+ .|++.+++++. ++|++++.+ |++. ....+++|..+++|+++|+++|+|.|+.|
T Consensus 166 ~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e-----p~~~---~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g 235 (433)
T 3pfo_A 166 PDARVHVQTVTEEESTGNGALSTLMRGY--RADACLIPE-----PTGH---TLTRAQVGAVWFRLRVRGTPVHVAYSETG 235 (433)
T ss_dssp ESSCEEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC-----CCSS---CEEEEECEEEEEEEEEECCCCBGGGGGGS
T ss_pred CCccEEEEEEecCccCChhHHHHHhcCC--CCCEEEEeC-----CCCC---ceEEecceEEEEEEEEEcCCCccCCCCcC
Confidence 8999999999999986 79999998864 589988743 4432 12345789999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhHhhc-----cCC-----CCCceEEEEEEEeeCCccccCCCCC
Q 023838 228 IDPILTASSVILALQQLISRE-----ADP-----LQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 228 ~nAi~~~~~~i~~l~~~~~~~-----~~~-----~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
+||+..+++++..|+++..+. .++ ..++++++|.|+|| .+.|+||++|
T Consensus 236 ~nAi~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG-~~~NvIP~~a 293 (433)
T 3pfo_A 236 TSAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGG-DWASSTAAWC 293 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEEC-SCTTBCCCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECC-CCCcccCcEE
Confidence 999999999999999876532 123 23569999999998 7999999975
No 5
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.9e-40 Score=303.65 Aligned_cols=227 Identities=26% Similarity=0.336 Sum_probs=198.4
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccC--CceEEEEEcCC-CCceEEEeec
Q 023838 25 LTNQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVA--KTGIVAQIGSG-SRPVVVLRAD 101 (276)
Q Consensus 25 ~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nvia~~~~~-~~~~i~l~~H 101 (276)
+++++.++++++++++++++++|+++||+|++|.++++||.++|+++|++++++.. ++|++++++++ ++|+|+|.+|
T Consensus 3 ~~~~i~~~~~~~~~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~ah 82 (394)
T 3ram_A 3 EKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAE 82 (394)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEEe
Confidence 57789999999999999999999999999999999999999999999999877543 57999999765 5699999999
Q ss_pred cccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--ccHH-HHHHcCCCCC
Q 023838 102 MDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAF-HMIKEGALGD 178 (276)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--~g~~-~~~~~~~~~~ 178 (276)
+|||| |++|+||+|...++++++++.|++.+..++++|.|+|+++||++ .|++ .|++.|.+++
T Consensus 83 ~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~~ 148 (394)
T 3ram_A 83 YDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQ 148 (394)
T ss_dssp CCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGGG
T ss_pred cccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCccc
Confidence 99999 56799999999999999999999876678999999999999986 6999 9999998878
Q ss_pred CcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcC-CCCCCCcHHHHHHHHHHHHHHhHhhccCCCCCceE
Q 023838 179 SEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVC 257 (276)
Q Consensus 179 ~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i 257 (276)
+|+++++|++++. ..+..++|..+++|+++|+++|+| .|+.|+||+..+++++..|+.+.... ...+++
T Consensus 149 ~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~---~~~~~~ 218 (394)
T 3ram_A 149 IDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI---KKDQRV 218 (394)
T ss_dssp CSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS---CTTCEE
T ss_pred CCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC---CCCCee
Confidence 9999998875532 234457799999999999999999 99999999999999999999875421 124678
Q ss_pred EEEEEEeeCCccccCCCCC
Q 023838 258 LSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 258 ~~~~i~~g~~~~nvIP~~a 276 (276)
+++.++|| .+.|+||++|
T Consensus 219 ~~~~i~gG-~~~NvIP~~a 236 (394)
T 3ram_A 219 HGVILDGG-KAANIIPDYT 236 (394)
T ss_dssp EEEEEEBC-SCTTBCCSEE
T ss_pred EEEEEECC-CCCceeCCeE
Confidence 88899987 7999999975
No 6
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=3e-40 Score=302.01 Aligned_cols=241 Identities=17% Similarity=0.231 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhCCCCCCcH---HHHHHHHHHHHHhcCCCeeecc-----CCceEEEEEcCCCCce
Q 023838 24 ILTNQVMISAQQDKDWLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV-----AKTGIVAQIGSGSRPV 95 (276)
Q Consensus 24 ~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~~~~ 95 (276)
.+.+++.++++++.+++++++++|++|||+|++| .++++||.++|+++|+++++.+ .++|+++++++..+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~ 84 (393)
T 1cg2_A 5 KRDNVLFQAATDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKN 84 (393)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCC
T ss_pred chhhHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCce
Confidence 3445677788888999999999999999999875 6899999999999999987653 2469999997543589
Q ss_pred EEEeeccccCCCc-CCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHH
Q 023838 96 VVLRADMDALPLQ-ELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHM 170 (276)
Q Consensus 96 i~l~~H~DtVp~~-~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~ 170 (276)
|+|++|+||||+. +...|||. ..+|++||||+ |+++++++++++.|++.+.+++++|.|+|+++||.| .|++.+
T Consensus 85 i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~ 163 (393)
T 1cg2_A 85 LLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDL 163 (393)
T ss_dssp EEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHH
T ss_pred EEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHH
Confidence 9999999999974 34557887 57899999995 799999999999999987777889999999999987 799999
Q ss_pred HHcCCCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcC-CCCCCCcHHHHHHHHHHHHHHhHhhcc
Q 023838 171 IKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREA 249 (276)
Q Consensus 171 ~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~ 249 (276)
++.+. .++|+++++++.. .+.+.+ ..+++|..+++|+++|+++||| .|+.|+||+..+++++..|+.+..
T Consensus 164 ~~~~~-~~~d~~i~~e~~~-~~~~~i----~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~--- 234 (393)
T 1cg2_A 164 IQEEA-KLADYVLSFEPTS-AGDEKL----SLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDD--- 234 (393)
T ss_dssp HHHHH-HHCSEEEECCCEE-TTSCEE----ESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCB---
T ss_pred HHHHh-hcCCEEEEeCCCC-CCCCcE----EEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhC---
Confidence 87642 2588999865321 023322 2356799999999999999997 899999999999999999987642
Q ss_pred CCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 250 DPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 250 ~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
+...++++++.|+|| .+.|+||++|
T Consensus 235 -~~~~~~~~v~~i~gG-~~~NvIP~~a 259 (393)
T 1cg2_A 235 -KAKNLRFNWTIAKAG-NVSNIIPASA 259 (393)
T ss_dssp -TTTTEEEEEEEEEEC-SSTTEECSEE
T ss_pred -cccCceEEEEEEeCC-CCCCEECccc
Confidence 335789999999998 6999999975
No 7
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=8.2e-40 Score=295.60 Aligned_cols=225 Identities=16% Similarity=0.177 Sum_probs=188.9
Q ss_pred HHhhHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcC-C-CCceEEEeeccccCCCcCC
Q 023838 33 AQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS-G-SRPVVVLRADMDALPLQEL 110 (276)
Q Consensus 33 i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~-~~~~i~l~~H~DtVp~~~~ 110 (276)
++++++++++++++|++|||+|++|.++++||.++|+++|++++++ .+|+++++++ . ++|+|+|.+|+||||+++
T Consensus 6 i~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~- 82 (356)
T 3ct9_A 6 IPTMTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN- 82 (356)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC--
T ss_pred HhHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC-
Confidence 4566789999999999999999999999999999999999998875 7899999965 3 468999999999999865
Q ss_pred CCCc---cccc-cCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCc-c-ccHHHHHHcCCCCCCcE
Q 023838 111 VEWE---HKSK-IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEGALGDSEA 181 (276)
Q Consensus 111 ~~w~---~~~~-~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-g-~g~~~~~~~~~~~~~d~ 181 (276)
.|. |.+. .+|++||||+ |+++++++++++.|++.+ ++++|.|+|+++||. | .|++++++++ .++|+
T Consensus 83 -~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~ 157 (356)
T 3ct9_A 83 -GWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSF 157 (356)
T ss_dssp -------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSE
T ss_pred -CCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCE
Confidence 464 5543 5899999998 689999999999999876 889999999999998 7 7999999886 35787
Q ss_pred EEEEeccCCCCc-ccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhccCC-CCCceEEE
Q 023838 182 IFGMHIDVGIPT-GSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP-LQSLVCLS 259 (276)
Q Consensus 182 ~i~~~~~~~~p~-~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~~~~~i~~ 259 (276)
++..+ |+ +.+ ..+++|..+++|+++|+++|++.| .|+||+..+++++.+|+++..+..++ ...+++++
T Consensus 158 ~i~~e-----p~~~~i----~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~v 227 (356)
T 3ct9_A 158 AIVGE-----PTEMQP----AIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSV 227 (356)
T ss_dssp EEECC-----SBTTCC----EEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEE
T ss_pred EEEcC-----CCCceE----EEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEe
Confidence 77643 33 222 235679999999999999999999 99999999999999998865443333 35789999
Q ss_pred EEEEeeCCccccCCCCC
Q 023838 260 LLLSIYSETCELLPLKA 276 (276)
Q Consensus 260 ~~i~~g~~~~nvIP~~a 276 (276)
+.|+|| .+.|+||++|
T Consensus 228 g~i~gG-~~~NviP~~a 243 (356)
T 3ct9_A 228 TVINAG-TQHNVVPDKC 243 (356)
T ss_dssp EEEEEC-SSTTBCCSEE
T ss_pred eEEecC-CcCCcCCCce
Confidence 999998 7999999975
No 8
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=4.4e-39 Score=294.33 Aligned_cols=235 Identities=17% Similarity=0.260 Sum_probs=191.1
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeec--cCCceEEEEEcCCCCceEEEeeccccCCCcCCCCCc-
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE- 114 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~- 114 (276)
+++++++++|+++||+|++|.++++||.++|+++|+++++. +..+|++++++ .++|+|+|++|+||||.++..+|.
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRG-TKAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEEC-CCCCEEEEEcccCCcCCCCcccCCC
Confidence 57899999999999999999999999999999999988763 35689999994 346899999999999998777885
Q ss_pred --ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--ccHHHHHHcCCC--CCCcEEEE
Q 023838 115 --HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGAL--GDSEAIFG 184 (276)
Q Consensus 115 --~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--~g~~~~~~~~~~--~~~d~~i~ 184 (276)
|.+ +.||++||||+ |+++++++.+++.|++.+.+++++|.|+|++|||.+ .|++.+++.... ..+|++++
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 544 46899999998 689999999999998877778999999999999975 699888764221 24788887
Q ss_pred EeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhcc-CCCCCceEEEEEEE
Q 023838 185 MHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA-DPLQSLVCLSLLLS 263 (276)
Q Consensus 185 ~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~-~~~~~~~i~~~~i~ 263 (276)
.++.+..+.+.. + ..+.+|..+++|+++|+++|++.|+.|+||+..+++++..|+.+..+.. +++.+++++++.|+
T Consensus 165 ~e~~~~~~~g~~-i--~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-I--KNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-E--ECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-e--EEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 554322223322 1 2346799999999999999999999999999999999999988542221 23456799999999
Q ss_pred eeCCccccCCCCC
Q 023838 264 IYSETCELLPLKA 276 (276)
Q Consensus 264 ~g~~~~nvIP~~a 276 (276)
+|..+.|+||++|
T Consensus 242 gG~~~~NviP~~a 254 (393)
T 1vgy_A 242 GGTGATNVIPGEL 254 (393)
T ss_dssp ECCSCTTEECSEE
T ss_pred CCCCCCcccCCeE
Confidence 8744899999975
No 9
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=1.7e-38 Score=288.08 Aligned_cols=236 Identities=19% Similarity=0.270 Sum_probs=185.1
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeec--cCCceEEEEEcCCCCceEEEeeccccCCCcCCCCCc
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (276)
++++++++++|+++||+|++|.++++||.++|+++|+++++. ++.+|++++++ .++|+|+|.+||||||.++...|.
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCC
Confidence 367899999999999999999999999999999999998753 35689999984 346999999999999998767786
Q ss_pred cc---cc-cCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--ccHHHHHHcCC--CCCCcEEE
Q 023838 115 HK---SK-IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGA--LGDSEAIF 183 (276)
Q Consensus 115 ~~---~~-~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--~g~~~~~~~~~--~~~~d~~i 183 (276)
.. +. .||++||||+ |+++++++.+++.|++.+.+++++|.|+|+++||.+ .|++.+++... ...+|+++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 44 43 5899999998 689999999999988877778999999999999987 59998876421 12478888
Q ss_pred EEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhc-cCCCCCceEEEEEE
Q 023838 184 GMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISRE-ADPLQSLVCLSLLL 262 (276)
Q Consensus 184 ~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~-~~~~~~~~i~~~~i 262 (276)
+.++.+..+.+.. + ..+.+|..+++++++|+++|+|.|+.|+||+..+++++.+|++...+. ...+..++++++.|
T Consensus 161 ~~e~~~~~~~g~~-i--~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i 237 (377)
T 3isz_A 161 VGEPSSAKNLGDV-V--KNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANI 237 (377)
T ss_dssp ECCCCBSSSTTSE-E--EEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEE
T ss_pred EcCCCCcccCCce-E--EEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEE
Confidence 7554332333332 1 234679999999999999999999999999999999999998753222 12246789999999
Q ss_pred EeeCCccccCCCCC
Q 023838 263 SIYSETCELLPLKA 276 (276)
Q Consensus 263 ~~g~~~~nvIP~~a 276 (276)
++|..+.|+||++|
T Consensus 238 ~gg~~~~nvip~~~ 251 (377)
T 3isz_A 238 HAGTGSNNVIPAEL 251 (377)
T ss_dssp EECCSCSSCCCSEE
T ss_pred ECCCCCCcccCCce
Confidence 99744899999874
No 10
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=294.39 Aligned_cols=249 Identities=16% Similarity=0.117 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhhCCCC--CCc------HHHHHHHHHHHHHhcCCCeeecc--------C-----C
Q 023838 23 EILTNQVMISAQQDKDWLVSVRRQIHENPEL--LFE------EHNTSALIRRELDKLGIPYAYPV--------A-----K 81 (276)
Q Consensus 23 ~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~--s~~------e~~~~~~l~~~l~~~G~~~~~~~--------~-----~ 81 (276)
+...+++.++++++++++++++++|++|||+ |++ |.++++||.++|+++|+++++.+ + .
T Consensus 10 ~~~~~~i~~~i~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~~~ 89 (485)
T 3dlj_A 10 PALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLPIP 89 (485)
T ss_dssp STTHHHHHHHHHHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEECC
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccCCC
Confidence 4556789999999999999999999999999 877 67899999999999999887642 2 2
Q ss_pred ceEEEEEcCC-CCceEEEeeccccCCCcCCCCCc---ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceE
Q 023838 82 TGIVAQIGSG-SRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTV 153 (276)
Q Consensus 82 ~nvia~~~~~-~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v 153 (276)
+|+++.++++ ++|+|+|+|||||||+++...|. |.+ +.+|++||||+ |++++++++|++.|++.+.+++++|
T Consensus 90 ~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 169 (485)
T 3dlj_A 90 PVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPVNI 169 (485)
T ss_dssp CEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEE
T ss_pred cEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCccE
Confidence 5899999754 46999999999999998766785 444 36999999998 6999999999999999888899999
Q ss_pred EEEEecCCCcc-ccHHHHHHcCC---CCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCC--CcCCCCCC
Q 023838 154 RILFQPAEEGG-AGAFHMIKEGA---LGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGG--HAAMPHST 227 (276)
Q Consensus 154 ~~~~~~dEE~g-~g~~~~~~~~~---~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~--Hs~~p~~g 227 (276)
.|+|+++||.| .|++.+++++. ++++|+++++|+....+ +...+ ..+++|..+++|+++|+++ |+|. .|
T Consensus 170 ~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~--~~g~~g~~~~~i~v~G~~~~~H~~~--~g 244 (485)
T 3dlj_A 170 KFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQ-RKPAI--TYGTRGNSYFMVEVKCRDQDFHSGT--FG 244 (485)
T ss_dssp EEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC---CCEE--EEEECEEEEEEEEEESCSSCEETTT--ST
T ss_pred EEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCC-CCeeE--EEeccceEEEEEEEEECCCCCcCCC--CC
Confidence 99999999987 79999998753 55799999876421001 11111 2347799999999999999 9996 35
Q ss_pred CcHHHHHHHHHHHHHHhHhhc-----------cCC-------------C---------------------------CCce
Q 023838 228 IDPILTASSVILALQQLISRE-----------ADP-------------L---------------------------QSLV 256 (276)
Q Consensus 228 ~nAi~~~~~~i~~l~~~~~~~-----------~~~-------------~---------------------------~~~~ 256 (276)
.||+..+.+++..|..+..+. .+| + ..++
T Consensus 245 ~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 324 (485)
T 3dlj_A 245 GILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPS 324 (485)
T ss_dssp TSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCE
T ss_pred ccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCc
Confidence 566666666666555543321 111 1 1588
Q ss_pred EEEEEEEee---CCccccCCCCC
Q 023838 257 CLSLLLSIY---SETCELLPLKA 276 (276)
Q Consensus 257 i~~~~i~~g---~~~~nvIP~~a 276 (276)
++++.|+|| +++.||||++|
T Consensus 325 ~~v~~i~gG~~gp~a~NVIP~~a 347 (485)
T 3dlj_A 325 LSIHGIEGAFDEPGTKTVIPGRV 347 (485)
T ss_dssp EEEEEEESSCCSSSCCCEECSEE
T ss_pred eEEEEEecCCcCCCCCceeCCee
Confidence 999999986 15899999975
No 11
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.5e-38 Score=288.31 Aligned_cols=227 Identities=17% Similarity=0.165 Sum_probs=184.9
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCC-eeeccCCceEEEEEcCCCCceEEEeeccccCCCcCCCCCcc
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEH 115 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~ 115 (276)
++++++++++|+++||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|++|+||||+++ .|++
T Consensus 12 ~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~ 89 (369)
T 3tx8_A 12 LGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPS 89 (369)
T ss_dssp CSCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSC
T ss_pred HHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCC
Confidence 46789999999999999999999999999999999884 44433467999999765569999999999999875 3444
Q ss_pred ccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc---ccHHHHHHcCC-CCCCcEEEEEecc
Q 023838 116 KSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG---AGAFHMIKEGA-LGDSEAIFGMHID 188 (276)
Q Consensus 116 ~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g---~g~~~~~~~~~-~~~~d~~i~~~~~ 188 (276)
. ..+|++||||+ |+++++++++++.|++. ..++++|.|+|+++||.| .|++.+++++. ..+.|+++..+
T Consensus 90 ~-~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~e-- 165 (369)
T 3tx8_A 90 R-VEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGE-- 165 (369)
T ss_dssp E-ECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECC--
T ss_pred e-EECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeC--
Confidence 3 35899999998 59999999999999864 468999999999999987 49999998751 12467777633
Q ss_pred CCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhcc--CCC-CCceEEEEEEEee
Q 023838 189 VGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREA--DPL-QSLVCLSLLLSIY 265 (276)
Q Consensus 189 ~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~--~~~-~~~~i~~~~i~~g 265 (276)
|.. +.+ ..+++|..+++|+++|+++|+|.|+.|+||+..+++++..|+++..+.. ++. ..++++++.|++|
T Consensus 166 p~~--~~i----~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG 239 (369)
T 3tx8_A 166 PTG--GWI----EAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESG 239 (369)
T ss_dssp CCT--TCE----EESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEEC
T ss_pred CCC--Cce----eeecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECC
Confidence 221 222 2357799999999999999999999999999999999999998754322 121 2579999999987
Q ss_pred CCccccCCCCC
Q 023838 266 SETCELLPLKA 276 (276)
Q Consensus 266 ~~~~nvIP~~a 276 (276)
.+.|+||++|
T Consensus 240 -~~~NvIP~~a 249 (369)
T 3tx8_A 240 -VANNVIPDLA 249 (369)
T ss_dssp -SBTTBCCSEE
T ss_pred -CCCccccCcE
Confidence 7999999975
No 12
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.1e-37 Score=291.46 Aligned_cols=244 Identities=13% Similarity=0.089 Sum_probs=191.3
Q ss_pred HHHHHHHHhhH-HHHHHHHHHhhhCCCCCCc----------HHHHHHHHHHHHHhcCCC---eeec--cC-CceEEEEEc
Q 023838 27 NQVMISAQQDK-DWLVSVRRQIHENPELLFE----------EHNTSALIRRELDKLGIP---YAYP--VA-KTGIVAQIG 89 (276)
Q Consensus 27 ~~i~~~i~~~~-~~~~~~~~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~---~~~~--~~-~~nvia~~~ 89 (276)
+++.+++++++ +++++++++|++|||+|.+ |.++++|+.++|+++|++ ++.. .+ ++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~ 85 (472)
T 3pfe_A 6 QGLYDYICQQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIP 85 (472)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEEC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEc
Confidence 45778888888 8999999999999999964 899999999999999995 4332 23 589999997
Q ss_pred CCCCceEEEeeccccCCCcCCCCCc-----ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecC
Q 023838 90 SGSRPVVVLRADMDALPLQELVEWE-----HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPA 160 (276)
Q Consensus 90 ~~~~~~i~l~~H~DtVp~~~~~~w~-----~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~d 160 (276)
+.++|+|+|+|||||||++ +.|. |.+ +++|++||||+ |++++++++|++.|++.+..++ +|.|+|+++
T Consensus 86 g~~~~~i~l~~H~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~~ 162 (472)
T 3pfe_A 86 GQIDDTVLLYGHLDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEAC 162 (472)
T ss_dssp CSEEEEEEEEEECCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEESC
T ss_pred CCCCCeEEEEccccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEeC
Confidence 6446999999999999985 3564 555 46999999998 6999999999999998876666 999999999
Q ss_pred CCcc-ccHHHHHHcC--CCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEE--EEEEccCCCcCCCCCC-CcHHHHH
Q 023838 161 EEGG-AGAFHMIKEG--ALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFN--VKVEGRGGHAAMPHST-IDPILTA 234 (276)
Q Consensus 161 EE~g-~g~~~~~~~~--~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~--i~~~G~~~Hs~~p~~g-~nAi~~~ 234 (276)
||.| .|++.+++++ .++++|+++++|.....+ +...+. .+++|..+++ |+++|+++|||.|..+ .||+..+
T Consensus 163 EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~i~--~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~ 239 (472)
T 3pfe_A 163 EESGSYDLPFYIELLKERIGKPSLVICLDSGAGNY-EQLWMT--TSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVA 239 (472)
T ss_dssp GGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCSCS-SSCEEE--EEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHH
T ss_pred CCCCChhHHHHHHHhHhhccCCCEEEEeCCCcCCC-CCeeEE--EeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHH
Confidence 9988 7999999875 244689999987532222 222222 3456777766 5558999999988754 4999999
Q ss_pred HHHHHHHHHhHhh---------c-----------------------------cCCCC------------CceEEEEEEEe
Q 023838 235 SSVILALQQLISR---------E-----------------------------ADPLQ------------SLVCLSLLLSI 264 (276)
Q Consensus 235 ~~~i~~l~~~~~~---------~-----------------------------~~~~~------------~~~i~~~~i~~ 264 (276)
++++.+|+++... . .+++. .++++++.|+|
T Consensus 240 ~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~g 319 (472)
T 3pfe_A 240 RQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADG 319 (472)
T ss_dssp HHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEES
T ss_pred HHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeec
Confidence 9999999886210 0 00110 57999999998
Q ss_pred e---CCccccCCCCC
Q 023838 265 Y---SETCELLPLKA 276 (276)
Q Consensus 265 g---~~~~nvIP~~a 276 (276)
| +++.|+||++|
T Consensus 320 G~~~g~a~NvIP~~a 334 (472)
T 3pfe_A 320 FPAIADAGNVMRPVT 334 (472)
T ss_dssp CCCTTTCCSCBCSEE
T ss_pred CcCCCCCCCEeCCcc
Confidence 6 36999999975
No 13
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=2e-37 Score=290.39 Aligned_cols=214 Identities=13% Similarity=0.142 Sum_probs=178.8
Q ss_pred HHHHHHHHhhHH-HHHHHHHHhhhCCCCCCcH---HHHHHHHHHHHHhcCCCeeecc--CCceEEEEEcCC--CCceEEE
Q 023838 27 NQVMISAQQDKD-WLVSVRRQIHENPELLFEE---HNTSALIRRELDKLGIPYAYPV--AKTGIVAQIGSG--SRPVVVL 98 (276)
Q Consensus 27 ~~i~~~i~~~~~-~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~--~~~nvia~~~~~--~~~~i~l 98 (276)
+++.++++++++ ++++++++|++|||+|++| .++++||.++|+++|+++++.+ +++|++++++++ ++|+|+|
T Consensus 32 ~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~l 111 (481)
T 2pok_A 32 EQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLIF 111 (481)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEEE
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEEE
Confidence 678999999999 9999999999999999876 8999999999999999887653 468999999653 4699999
Q ss_pred eeccccCCCcCCCCCc---ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHH
Q 023838 99 RADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHM 170 (276)
Q Consensus 99 ~~H~DtVp~~~~~~w~---~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~ 170 (276)
+||+||||+++...|. |.+ ..||++||||+ |++++++++|++.|++.+..++++|.|+|+++||.| .|++.+
T Consensus 112 ~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~~~ 191 (481)
T 2pok_A 112 YNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKY 191 (481)
T ss_dssp EEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTHHHH
T ss_pred EEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhHHHH
Confidence 9999999998766784 554 45899999996 899999999999999885578999999999999988 688888
Q ss_pred HHcC--CCCCCcEEEEEeccCCCCc-ccEEeeccceeeeEEEEEEEEEccC--CCcCCCCCCCcHHHHHHHHHHHHHHh
Q 023838 171 IKEG--ALGDSEAIFGMHIDVGIPT-GSIASISGPHLAATSVFNVKVEGRG--GHAAMPHSTIDPILTASSVILALQQL 244 (276)
Q Consensus 171 ~~~~--~~~~~d~~i~~~~~~~~p~-~~~~~~~~~~~~G~~~~~i~~~G~~--~Hs~~p~~g~nAi~~~~~~i~~l~~~ 244 (276)
++++ .++++|+++..++ +.+. +.. ....+++|..+++|+++|++ +||+.|+.|.||+..+++++..|++.
T Consensus 192 ~~~~~~~~~~~d~~i~~~~--~~~~~~~~--~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~ 266 (481)
T 2pok_A 192 LEKHADKLRGADLLVWEQG--TKNALEQL--EISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAA 266 (481)
T ss_dssp HHHHHHHHTTCSEEECSCC--BBCTTSCE--EEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCT
T ss_pred HHHhHhhccCCCEEEECCC--CccCCCCe--eEEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCC
Confidence 8764 1333788887432 2111 112 22346789999999999999 89999999999999999999998764
No 14
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=2.8e-37 Score=279.81 Aligned_cols=221 Identities=13% Similarity=0.103 Sum_probs=185.5
Q ss_pred HHHHHHHHHHhhhCCCCC---CcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcC---CCCceEEEeeccccCCCcCC
Q 023838 37 KDWLVSVRRQIHENPELL---FEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS---GSRPVVVLRADMDALPLQEL 110 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~---~~~~~i~l~~H~DtVp~~~~ 110 (276)
++++++++++|++|||+| ++|.++++||.++|+++|+++++. ..|+++.+.+ .++|+|+|.+|+||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~--- 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA--- 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---
Confidence 468899999999999999 889999999999999999998764 3678888752 34589999999999985
Q ss_pred CCCccccc-cCCeeecCCc---cHHHHHHHHHHHHHHhccCCC---Cce--EEEEEecCCCc-c-ccHHHHHHcCCCCCC
Q 023838 111 VEWEHKSK-IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKL---KGT--VRILFQPAEEG-G-AGAFHMIKEGALGDS 179 (276)
Q Consensus 111 ~~w~~~~~-~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~---~~~--v~~~~~~dEE~-g-~g~~~~~~~~~~~~~ 179 (276)
...||.+. .+|++||||+ |+++++++++++.|++.+.++ +++ |.|+|+++||. | .|++++++++ ++
T Consensus 80 ~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~ 156 (364)
T 2rb7_A 80 EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RA 156 (364)
T ss_dssp CGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EE
T ss_pred CCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CC
Confidence 35677764 4899999998 679999999999999876555 568 99999999997 4 7999999875 46
Q ss_pred cEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhhccCC-C--CCce
Q 023838 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISREADP-L--QSLV 256 (276)
Q Consensus 180 d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~-~--~~~~ 256 (276)
|+++. .++++|++ +. .+.+|..+++|+++|+++|++.|+.|+||+..+++++..|+++.. ++ . ..++
T Consensus 157 d~~i~--~d~~~p~~-i~----~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~ 226 (364)
T 2rb7_A 157 DYVVA--LDGGNPQQ-VI----TKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENEDHWHRT 226 (364)
T ss_dssp EEEEE--CSSSBTTE-EE----EEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCTTCCSCE
T ss_pred CEEEE--ccCCcccc-eE----EEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhhcCCCce
Confidence 66554 45677877 32 346799999999999999999999999999999999999988632 22 2 4689
Q ss_pred EEEEEEEeeCCccccCCCCC
Q 023838 257 CLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 257 i~~~~i~~g~~~~nvIP~~a 276 (276)
++++.|+|| .+.|+||++|
T Consensus 227 ~~vg~i~gG-~~~NviP~~a 245 (364)
T 2rb7_A 227 VNLGRIRAG-ESTNKVPDVA 245 (364)
T ss_dssp EEEEEEEEC-SCTTEECSEE
T ss_pred EEEEEEecC-CcCcccCcce
Confidence 999999997 7999999975
No 15
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=4e-37 Score=279.18 Aligned_cols=222 Identities=15% Similarity=0.100 Sum_probs=175.5
Q ss_pred HHHhhHHHHHHHHHHhhhCCCCC--C---cHHHHHHHHHHHHHhcCCCeeecc---CCceEEEEEcCCCCceEEEeeccc
Q 023838 32 SAQQDKDWLVSVRRQIHENPELL--F---EEHNTSALIRRELDKLGIPYAYPV---AKTGIVAQIGSGSRPVVVLRADMD 103 (276)
Q Consensus 32 ~i~~~~~~~~~~~~~l~~ips~s--~---~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~~~~~i~l~~H~D 103 (276)
+++.+++++++++++|++|||+| + +|.++++||.++|+ |+++++.. +++|+++ +++. |+|+|.+|+|
T Consensus 3 ~~~~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D 77 (369)
T 2f7v_A 3 HMTDLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLD 77 (369)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECC
T ss_pred hhhhhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeec
Confidence 34566788999999999999998 8 89999999999999 99887643 4689999 8654 8899999999
Q ss_pred cCCCcC-CCCCcccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCc-c-ccHHHHHHcCCC
Q 023838 104 ALPLQE-LVEWEHKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-G-AGAFHMIKEGAL 176 (276)
Q Consensus 104 tVp~~~-~~~w~~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-g-~g~~~~~~~~~~ 176 (276)
|||.++ +...||.+ ..||++||||+ |+++++++.+++. ++++|.|+|++|||. | .|++++++++.
T Consensus 78 ~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~~~~- 149 (369)
T 2f7v_A 78 TVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLARGL- 149 (369)
T ss_dssp BCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHTTCC-
T ss_pred ccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHhcCC-
Confidence 999875 22234554 46899999998 7888888888764 789999999999998 6 79999998865
Q ss_pred CCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCC-CCCcHHHHHHHHHHHHHHhHhhcc----CC
Q 023838 177 GDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPH-STIDPILTASSVILALQQLISREA----DP 251 (276)
Q Consensus 177 ~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~-~g~nAi~~~~~~i~~l~~~~~~~~----~~ 251 (276)
++|++++.+ |++. ....+++|..+++|+++|+++|+|.|+ .|+||+..+++++..|+++..+.. ++
T Consensus 150 -~~d~~i~~e-----~~~~---~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 220 (369)
T 2f7v_A 150 -PYDAVLVAE-----PTMS---EAVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGG 220 (369)
T ss_dssp -CCSEEEECC-----CSTT---CBBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETT
T ss_pred -CCCEEEECC-----CCCC---cceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCc
Confidence 689988743 3221 123457799999999999999999999 899999999999999988765421 22
Q ss_pred CCCceEEEEEEEeeCCccccCCCCC
Q 023838 252 LQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 252 ~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
...++++++.|++| .+.|+||++|
T Consensus 221 ~~~~~~~vg~i~gG-~~~NviP~~a 244 (369)
T 2f7v_A 221 LTGLRFNIGRVDGG-IKANMIAPAA 244 (369)
T ss_dssp EESCEEEEEEEEEC-SSTTSCCSEE
T ss_pred ccCCceEEEEeecC-CCCCcCCCce
Confidence 11279999999997 7999999975
No 16
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=2.2e-36 Score=282.99 Aligned_cols=245 Identities=13% Similarity=0.108 Sum_probs=198.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhhhCCCCCCcH------HHHHHHHHHHHHhcCCCeeecc--------CC-----ceEEE
Q 023838 26 TNQVMISAQQDKDWLVSVRRQIHENPELLFEE------HNTSALIRRELDKLGIPYAYPV--------AK-----TGIVA 86 (276)
Q Consensus 26 ~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~nvia 86 (276)
.+++.++++.+++++++++++|++|||+|++| .++++||+++|+++|+++++.. ++ +|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a 87 (479)
T 2zog_A 8 LKAVFQYIDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLG 87 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEE
Confidence 46688999999999999999999999999876 7899999999999999887643 22 89999
Q ss_pred EEcCC-CCceEEEeeccccCCCcCCCCCc---ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEe
Q 023838 87 QIGSG-SRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQ 158 (276)
Q Consensus 87 ~~~~~-~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~ 158 (276)
+++++ ++|+|+|+||+||||.++...|. |.+ ..||++||||+ |+++++++++++.|++.+.+++++|.|+|+
T Consensus 88 ~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~ 167 (479)
T 2zog_A 88 KLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLE 167 (479)
T ss_dssp EECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEE
T ss_pred EecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEe
Confidence 99754 46999999999999987666785 444 36899999995 699999999999999988788999999999
Q ss_pred cCCCcc-ccHHHHHHcC---CCCCCcEEEEEeccCCCC-cccEEeeccceeeeEEEEEEEEEccC--CCcCCCCCCCcHH
Q 023838 159 PAEEGG-AGAFHMIKEG---ALGDSEAIFGMHIDVGIP-TGSIASISGPHLAATSVFNVKVEGRG--GHAAMPHSTIDPI 231 (276)
Q Consensus 159 ~dEE~g-~g~~~~~~~~---~~~~~d~~i~~~~~~~~p-~~~~~~~~~~~~~G~~~~~i~~~G~~--~Hs~~p~~g~nAi 231 (276)
++||.| .|++.+++++ ++.++|++++.++....+ .+.+ ..+++|..+++|+++|++ +|||.| |.||+
T Consensus 168 ~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i----~~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~ai 241 (479)
T 2zog_A 168 GMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCI----TYGLRGICYFFIEVECSDKDLHSGVY--GGSVH 241 (479)
T ss_dssp SCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEE----EEEECEEEEEEEEEECCSSCEEHHHH--TTTSC
T ss_pred cccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEE----EEecceEEEEEEEEEeCCCCCccCCC--CCCcc
Confidence 999987 7999999875 445689988865421111 2222 235789999999999999 999985 78999
Q ss_pred HHHHHHHHHHHHhHhhc-----------cC-------------CC---------------------------CCceEEEE
Q 023838 232 LTASSVILALQQLISRE-----------AD-------------PL---------------------------QSLVCLSL 260 (276)
Q Consensus 232 ~~~~~~i~~l~~~~~~~-----------~~-------------~~---------------------------~~~~i~~~ 260 (276)
..+++++..|+++..+. .. ++ ..++++++
T Consensus 242 ~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~ 321 (479)
T 2zog_A 242 EAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLH 321 (479)
T ss_dssp CHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEE
T ss_pred CHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEe
Confidence 99999999987654321 00 00 14789999
Q ss_pred EEEee---CCccccCCCCC
Q 023838 261 LLSIY---SETCELLPLKA 276 (276)
Q Consensus 261 ~i~~g---~~~~nvIP~~a 276 (276)
.|+|| +.+.|+||++|
T Consensus 322 ~i~gg~~g~~~~NvIP~~a 340 (479)
T 2zog_A 322 GIEGAFSGSGAKTVIPRKV 340 (479)
T ss_dssp EEESSCCSSSCCCEECSEE
T ss_pred eeecCCcCCCCccccCCce
Confidence 99986 26899999975
No 17
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-36 Score=278.93 Aligned_cols=233 Identities=15% Similarity=0.194 Sum_probs=187.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-------CCceEEEEEcCC----CCce
Q 023838 27 NQVMISAQQDKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTGIVAQIGSG----SRPV 95 (276)
Q Consensus 27 ~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~----~~~~ 95 (276)
+....+++.+++++++++++|++|||+|++|.++++||.++|+++|++++++. +.+|++++++++ ++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~ 92 (396)
T 3rza_A 13 ENLYFQGMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPK 92 (396)
T ss_dssp ------CCSCHHHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCC
T ss_pred cceeEEEeecHHHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCe
Confidence 44566778888999999999999999999999999999999999999987653 268999999763 4699
Q ss_pred EEEeeccccCCCcCCCCCccccccCCeeecCCc-------cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccH
Q 023838 96 VVLRADMDALPLQELVEWEHKSKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGA 167 (276)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~-------kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~ 167 (276)
|+|.|||||||+++ .|+...+.+|++||||+ |+++++++++++.|++.+. ++++|.|+|+++||.| .|+
T Consensus 93 i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga 169 (396)
T 3rza_A 93 LYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGA 169 (396)
T ss_dssp EEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-CCCCEEEEEESCGGGTSHHH
T ss_pred EEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEcccccccHhH
Confidence 99999999999864 34221223499999997 4999999999999988764 6899999999999987 689
Q ss_pred HHHHHcCCCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHHHhHhh
Q 023838 168 FHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILALQQLISR 247 (276)
Q Consensus 168 ~~~~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~ 247 (276)
+.+..++. +.|+.+..++ ..+.+.+.+ +.+|..+++|+++|+++|+|.|+.|+||+..+++++..|+..
T Consensus 170 ~~~~~~~~--~~~~~~~~~~--~~~~g~i~~----~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~--- 238 (396)
T 3rza_A 170 KELNSELL--DADFGYAIDA--SADVGTTVV----GAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG--- 238 (396)
T ss_dssp HHCCGGGC--CCSEEEEEEE--SSCTTCEEE----EECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE---
T ss_pred hhhchhhc--ccceEEEEec--CCCcceEEE----cCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC---
Confidence 88876543 3567776543 445555433 356899999999999999999999999999999999998752
Q ss_pred ccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 248 EADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 248 ~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
+.+ ..+++++|.|++| .+.|+||++|
T Consensus 239 ~~~--~~~~~~vg~i~gG-~~~NvIP~~a 264 (396)
T 3rza_A 239 QVD--EITTANIGKFHGG-SATNIVADEV 264 (396)
T ss_dssp EEE--TTEEEEEEEEEEC-SCTTBCCCEE
T ss_pred CCC--CCceeeeeEEecC-CCCcccCceE
Confidence 222 3578999999998 7999999975
No 18
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=7.2e-36 Score=271.07 Aligned_cols=222 Identities=14% Similarity=0.176 Sum_probs=183.8
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-------CCceEEEEEcCC--CCceEEEeeccccCCC
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTGIVAQIGSG--SRPVVVLRADMDALPL 107 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~--~~~~i~l~~H~DtVp~ 107 (276)
++++++++++|+++||+|++|.++++||.++|+++|++++++. +++|+++++++. ++|+|+|.+|+||||+
T Consensus 5 ~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~ 84 (373)
T 3gb0_A 5 QERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVP 84 (373)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSS
T ss_pred HHHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCC
Confidence 4789999999999999999999999999999999999987753 258999999764 4699999999999998
Q ss_pred cCCCCCccccccCCeeecCCc-------cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCC
Q 023838 108 QELVEWEHKSKIDGKMHACGH-------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDS 179 (276)
Q Consensus 108 ~~~~~w~~~~~~~g~l~g~G~-------kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~ 179 (276)
++ .|+ +..++|++||||+ |+++++++++++.|++.+. ++++|.|+|+++||.| .|++.+..++. +.
T Consensus 85 ~~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~ 158 (373)
T 3gb0_A 85 GN--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TA 158 (373)
T ss_dssp CS--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CC
T ss_pred CC--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CC
Confidence 64 342 1356899999996 4899999999999998764 7899999999999987 78988865542 46
Q ss_pred cEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcC-CCCCCCcHHHHHHHHHHHHHHhHhhccCCCCCceEE
Q 023838 180 EAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MPHSTIDPILTASSVILALQQLISREADPLQSLVCL 258 (276)
Q Consensus 180 d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~-~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~ 258 (276)
|+++..++ ..+.+.+.. +.+|..+++|+++|+++|++ .|+.|+||+..+++++..|+.. +.+ ..++++
T Consensus 159 ~~~~~~~~--~~~~g~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~--~~~~~~ 227 (373)
T 3gb0_A 159 KYGYALDS--DGKVGEIVV----AAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID--SETTAN 227 (373)
T ss_dssp SEEEEEEE--CSCTTEEEE----EECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE--TTEEEE
T ss_pred CEEEEEcC--CCCCCeEEE----cCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC--Cccccc
Confidence 77776543 444454433 35689999999999999999 8999999999999999988652 222 357899
Q ss_pred EEEEEeeCCccccCCCCC
Q 023838 259 SLLLSIYSETCELLPLKA 276 (276)
Q Consensus 259 ~~~i~~g~~~~nvIP~~a 276 (276)
+|.|++| .+.|+||++|
T Consensus 228 vg~i~gG-~~~Nvip~~~ 244 (373)
T 3gb0_A 228 IGRFEGG-TQTNIVCDHV 244 (373)
T ss_dssp EEEEEEC-SCTTBCCCEE
T ss_pred eeEEecC-cccccccceE
Confidence 9999998 7999999975
No 19
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=1e-34 Score=272.74 Aligned_cols=235 Identities=14% Similarity=0.175 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhCCCCCCcH------------HHHHHHHHHHHHhcCCCeeeccCCceEEEEEc-C
Q 023838 24 ILTNQVMISAQQDKDWLVSVRRQIHENPELLFEE------------HNTSALIRRELDKLGIPYAYPVAKTGIVAQIG-S 90 (276)
Q Consensus 24 ~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~-~ 90 (276)
.|++++.++++++++++++++++|++|||+|++| .++++||.++|+++|+++++.+ |+++.+. +
T Consensus 20 ~m~~~i~~~i~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~g 96 (492)
T 3khx_A 20 HMASMWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAG 96 (492)
T ss_dssp ---CTTHHHHHTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEEE
T ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEeC
Confidence 3566788999999999999999999999999876 5899999999999999987653 4444432 2
Q ss_pred CCCceEEEeeccccCCCcCCCCCc---ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCc
Q 023838 91 GSRPVVVLRADMDALPLQELVEWE---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG 163 (276)
Q Consensus 91 ~~~~~i~l~~H~DtVp~~~~~~w~---~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~ 163 (276)
.++|+|+|+||+||||+++ .|. |.+ ++||++||||+ |++++++++|++.|++.+.+++++|.|+|++|||+
T Consensus 97 ~~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 174 (492)
T 3khx_A 97 KGNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEES 174 (492)
T ss_dssp CSSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTC
T ss_pred CCCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccC
Confidence 2358999999999999965 574 554 56899999987 79999999999999998888899999999999999
Q ss_pred c-ccHHHHHHcCCCCCCcEEEEEeccC-----------------------------------C-----CCccc--EEeec
Q 023838 164 G-AGAFHMIKEGALGDSEAIFGMHIDV-----------------------------------G-----IPTGS--IASIS 200 (276)
Q Consensus 164 g-~g~~~~~~~~~~~~~d~~i~~~~~~-----------------------------------~-----~p~~~--~~~~~ 200 (276)
| .|+++++++.. ++|+.+..+.+. + .|..- +...+
T Consensus 175 g~~g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ep 252 (492)
T 3khx_A 175 DWKCTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVK 252 (492)
T ss_dssp CCCTTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEEC
T ss_pred CCcCHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecc
Confidence 8 89999998743 244444321100 0 01000 11110
Q ss_pred ---------------cceeeeEE-----EEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHH------HhHh---hc---
Q 023838 201 ---------------GPHLAATS-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ------QLIS---RE--- 248 (276)
Q Consensus 201 ---------------~~~~~G~~-----~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~------~~~~---~~--- 248 (276)
..+.+|.. +++|+++|+++|+|.|+.|+|||..+++++.+|+ ++.. +.
T Consensus 253 t~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~ 332 (492)
T 3khx_A 253 ENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFN 332 (492)
T ss_dssp SCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTT
T ss_pred cchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCC
Confidence 12347888 9999999999999999999999999999999886 2211 00
Q ss_pred -----------cCC-CCCceEEEEEEEee
Q 023838 249 -----------ADP-LQSLVCLSLLLSIY 265 (276)
Q Consensus 249 -----------~~~-~~~~~i~~~~i~~g 265 (276)
.++ .+.+++|+|.|++|
T Consensus 333 ~~~~~~l~i~~~d~~~G~~t~n~g~i~~g 361 (492)
T 3khx_A 333 SDFGEKMGMKFHTDVMGDVTTNIGVITYD 361 (492)
T ss_dssp CTTSGGGTCC-------CCEEEEEEEEEE
T ss_pred CCCccccCCccccCCcCccEEeeeEEEEe
Confidence 111 35789999999987
No 20
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=1.9e-35 Score=273.65 Aligned_cols=222 Identities=15% Similarity=0.122 Sum_probs=180.0
Q ss_pred hHHHHHHHHHHhhhCCCCCC----------cHHHHHHHHHHHHHhcCCC-eeeccCCceEEEEEcCC---CCceEEEeec
Q 023838 36 DKDWLVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG---SRPVVVLRAD 101 (276)
Q Consensus 36 ~~~~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~i~l~~H 101 (276)
.++++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ..+|+++++++. +.|+|+|+||
T Consensus 25 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~H 103 (434)
T 3ife_A 25 MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLAH 103 (434)
T ss_dssp HHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEEE
T ss_pred HHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEEE
Confidence 35789999999999999998 5789999999999999997 7664 578999999753 2589999999
Q ss_pred cccCCCcCCCCCccccc----cC----------------------------CeeecCCc-------cHHHHHHHHHHHHH
Q 023838 102 MDALPLQELVEWEHKSK----ID----------------------------GKMHACGH-------DVHTTMLLGAAKLI 142 (276)
Q Consensus 102 ~DtVp~~~~~~w~~~~~----~~----------------------------g~l~g~G~-------kg~~a~~l~a~~~l 142 (276)
+||||.. ..|+++|. .| |++||||+ |++++++++|++.|
T Consensus 104 ~DtVp~~--~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L 181 (434)
T 3ife_A 104 LDTATDF--TGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYL 181 (434)
T ss_dssp CCBCTTS--CCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCC--CCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHH
Confidence 9999964 36766542 12 58999996 89999999999999
Q ss_pred HhccCCCCceEEEEEecCCCccccHHHHHHcCCCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcC
Q 023838 143 HQRKDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA 222 (276)
Q Consensus 143 ~~~~~~~~~~v~~~~~~dEE~g~g~~~~~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~ 222 (276)
++.+..++++|.|+|++|||+|.|++.+.... + ++|+++++|+ .+.+.+. .+.+|..+++|+++|+++|||
T Consensus 182 ~~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~---~~~g~i~----~~~~G~~~~~i~v~G~~~Hag 252 (434)
T 3ife_A 182 IHNPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDG---GPLGGLE----YESFNAAGAKLTFNGTNTHPG 252 (434)
T ss_dssp HTCTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCC---CSTTEEE----CCBCEEEEEEEEEECBCCCGG
T ss_pred HhCCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecC---CCCCcee----ecCCCeEEEEEEEEEEecCCC
Confidence 99887889999999999999998888875432 3 5899998763 2345443 346799999999999999998
Q ss_pred -CCCCCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 223 -MPHSTIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 223 -~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
.|+.|+||+..+++++..|+++... ..++.++|.|++| .+|+||++|
T Consensus 253 ~~P~~g~nAi~~aa~~i~~l~~~~~~-----~~~~~~~g~i~~g--~~n~iP~~a 300 (434)
T 3ife_A 253 TAKNKMRNATKLAMEFNGHLPVEEAP-----EYTEGYEGFYHLL--SLNGDVEQS 300 (434)
T ss_dssp GCTTTCBCHHHHHHHHHHTSCTTCSG-----GGCCTTCCEEEEE--EEEECSSEE
T ss_pred CCcccchhHHHHHHHHHHhcccccCC-----CcceeeeEEEEee--eEeEecCeE
Confidence 8999999999999999999875211 1234456677765 589999875
No 21
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=4.1e-34 Score=268.47 Aligned_cols=219 Identities=16% Similarity=0.165 Sum_probs=175.2
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC----CCceEEEeeccccCCCcCCC-
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG----SRPVVVLRADMDALPLQELV- 111 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~~~i~l~~H~DtVp~~~~~- 111 (276)
.+++++++++|++|||+|++|.++++||.++|+++|++++++ ..+|+++++++. ++|+|+|.||+||||+.+..
T Consensus 13 ~~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~-~~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~ 91 (490)
T 3mru_A 13 PAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRD-PTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDT 91 (490)
T ss_dssp SHHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTS
T ss_pred HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEc-CCCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCc
Confidence 478999999999999999999999999999999999998774 467999999642 46999999999999997643
Q ss_pred --CCcccc----ccCCeeecCCc------cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCC
Q 023838 112 --EWEHKS----KIDGKMHACGH------DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGD 178 (276)
Q Consensus 112 --~w~~~~----~~~g~l~g~G~------kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~ 178 (276)
+|..+| ..+|++||||+ |+++|++++++ + ....++++|.|+|++|||.| .|++.+++.. + +
T Consensus 92 ~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~-~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~ 165 (490)
T 3mru_A 92 DHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---A-SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L-K 165 (490)
T ss_dssp CCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---H-CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-C
T ss_pred ccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---H-hCCCCCCCEEEEEEcccccccHhHHHhhhcc-c-C
Confidence 686544 46899999998 35666666554 2 33456899999999999998 8999988653 3 4
Q ss_pred CcEEEEEeccCCCCcccEEe--e------------ccceeeeEEEEEEEEEc-cCCCcC-CCCCCC-cHHHHHHHHHHHH
Q 023838 179 SEAIFGMHIDVGIPTGSIAS--I------------SGPHLAATSVFNVKVEG-RGGHAA-MPHSTI-DPILTASSVILAL 241 (276)
Q Consensus 179 ~d~~i~~~~~~~~p~~~~~~--~------------~~~~~~G~~~~~i~~~G-~~~Hs~-~p~~g~-nAi~~~~~~i~~l 241 (276)
.|+++.++.. +.|.+.. . ....++|..+++|+++| +++||| .|+.|+ ||+..+++++..|
T Consensus 166 ~~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l 242 (490)
T 3mru_A 166 GDILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGH 242 (490)
T ss_dssp SSEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHH
T ss_pred CCEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHH
Confidence 7888876532 2222100 0 02345689999999999 899999 699999 9999999999998
Q ss_pred HHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 242 QQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 242 ~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
++. .+++++.|+|| .+.|+||++|
T Consensus 243 ~~~----------~~~~v~~i~gG-~~~NvIP~~a 266 (490)
T 3mru_A 243 AQE----------LDLRLVEFRGG-SLRNAIPREA 266 (490)
T ss_dssp TTT----------TTCEEEEEEEC-SCTTEECCCE
T ss_pred Hhc----------CcEEEEEEECC-CCCcccCCcc
Confidence 761 35899999997 7999999975
No 22
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.6e-33 Score=259.34 Aligned_cols=215 Identities=13% Similarity=0.129 Sum_probs=175.8
Q ss_pred HHHHHHHHHhhhCCCCCC----------cHHHHHHHHHHHHHhcCCC-eeeccCCceEEEEEcCC---CCceEEEeeccc
Q 023838 38 DWLVSVRRQIHENPELLF----------EEHNTSALIRRELDKLGIP-YAYPVAKTGIVAQIGSG---SRPVVVLRADMD 103 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~i~l~~H~D 103 (276)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ..+|+++++++. ++|+|+|.||+|
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 357889999999999998 7899999999999999998 6654 578999999653 358999999999
Q ss_pred cCCCcCCCCCcccc--------c-----------------------cCCeeecCC-----c--cHHHHHHHHHHHHHHhc
Q 023838 104 ALPLQELVEWEHKS--------K-----------------------IDGKMHACG-----H--DVHTTMLLGAAKLIHQR 145 (276)
Q Consensus 104 tVp~~~~~~w~~~~--------~-----------------------~~g~l~g~G-----~--kg~~a~~l~a~~~l~~~ 145 (276)
|||..+ .|.++| . .||++|||| + |+++++++++++.|++.
T Consensus 81 ~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~ 158 (417)
T 1fno_A 81 TSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN 158 (417)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC
Confidence 999865 464432 1 246899999 4 59999999999999988
Q ss_pred cCCCCceEEEEEecCCCccccHHHHHHcCCCCCCcEEEEEeccCCCCcccEEeeccceeeeEEEEEEEEEccCCCcC-CC
Q 023838 146 KDKLKGTVRILFQPAEEGGAGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASISGPHLAATSVFNVKVEGRGGHAA-MP 224 (276)
Q Consensus 146 ~~~~~~~v~~~~~~dEE~g~g~~~~~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~i~~~G~~~Hs~-~p 224 (276)
+ .++++|.|+|+++||.|.|++.++++++ ++|+++.++. .|.+.+. .+.+|..+++|+++|+++|+| .|
T Consensus 159 ~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~---~~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p 228 (417)
T 1fno_A 159 P-IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDG---GGVGELE----FENFNAASVNIKIVGNNVHPGTAK 228 (417)
T ss_dssp S-CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCC---CSTTBEE----CCBCEEEEEEEEEECBCCCGGGCT
T ss_pred C-CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCC---CCcCeeE----EecCCceeEEEEEEeeccCCCCCc
Confidence 7 7889999999999998888888775543 4788887653 2556543 346799999999999999999 79
Q ss_pred CCCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEee
Q 023838 225 HSTIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIY 265 (276)
Q Consensus 225 ~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g 265 (276)
+.|+||+..+++++..|+++..+...+...++++++.|++|
T Consensus 229 ~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG 269 (417)
T 1fno_A 229 GVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT 269 (417)
T ss_dssp TTCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC
T ss_pred cccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec
Confidence 99999999999999999886543333344678999999987
No 23
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=1.7e-32 Score=257.42 Aligned_cols=221 Identities=19% Similarity=0.210 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcC----CCCceEEEeeccccCCCcCCC-
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGS----GSRPVVVLRADMDALPLQELV- 111 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~----~~~~~i~l~~H~DtVp~~~~~- 111 (276)
.+++++++++|++|||+|++|.++++||.++|+++|++++.+ ..+|+++++++ .++|+|+|.||+||||.++..
T Consensus 10 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~ 88 (487)
T 2qyv_A 10 PKLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERD-EVGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGT 88 (487)
T ss_dssp SHHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEEC-TTCCEEEEECCCTTCTTBCCEEEEEESCBCCC-----
T ss_pred HHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCC
Confidence 478999999999999999999999999999999999998764 45799999965 235899999999999987653
Q ss_pred --CCcc---cc-ccCCeeecCCcc------HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCC
Q 023838 112 --EWEH---KS-KIDGKMHACGHD------VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGD 178 (276)
Q Consensus 112 --~w~~---~~-~~~g~l~g~G~k------g~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~ 178 (276)
+|.. .+ ..||++||||+. +++++++.+++ +.+ .++++|.|+|+++||.| .|++.+++++ + +
T Consensus 89 ~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~ 162 (487)
T 2qyv_A 89 NHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-R 162 (487)
T ss_dssp -----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-C
T ss_pred ccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-C
Confidence 6754 43 368999999983 66777777664 223 37899999999999987 7999988765 4 4
Q ss_pred CcEEEEEeccCCCCcccEEe--ecc------------ceeeeEEEEEEEEEc-cCCCcCCC-CCC-CcHHHHHHHHHHHH
Q 023838 179 SEAIFGMHIDVGIPTGSIAS--ISG------------PHLAATSVFNVKVEG-RGGHAAMP-HST-IDPILTASSVILAL 241 (276)
Q Consensus 179 ~d~~i~~~~~~~~p~~~~~~--~~~------------~~~~G~~~~~i~~~G-~~~Hs~~p-~~g-~nAi~~~~~~i~~l 241 (276)
+|+++..+++ +.+.+.. +.+ ...+| .+++|+++| +++|||.| +.| .||+..+++++..|
T Consensus 163 ~d~~~~~d~~---~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l 238 (487)
T 2qyv_A 163 SEILINTDTE---ENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAEL 238 (487)
T ss_dssp CSEEEECCCC---CTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEccC---CCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHH
Confidence 7888875432 2233321 111 12344 789999999 89999976 776 69999999999999
Q ss_pred HHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 242 QQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 242 ~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
+.+. ...+++++.|+|| ...|+||++|
T Consensus 239 ~~~~-------~~~~~~v~~i~gG-~~~NvIP~~a 265 (487)
T 2qyv_A 239 QQNQ-------PHFDFTLANIRGG-SIRNAIPRES 265 (487)
T ss_dssp HHHC-------TTCCEEEEEEEEE-SCTTBCCCCE
T ss_pred hhcc-------CCCcEEEEEEeCC-CcCcccCCce
Confidence 8762 2468999999998 7999999975
No 24
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=4.5e-32 Score=250.06 Aligned_cols=225 Identities=15% Similarity=0.149 Sum_probs=180.5
Q ss_pred HHHHhhHHHHHHHHHHhhhCCCCC----------CcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC-C-CceEEE
Q 023838 31 ISAQQDKDWLVSVRRQIHENPELL----------FEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVL 98 (276)
Q Consensus 31 ~~i~~~~~~~~~~~~~l~~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l 98 (276)
++++.+.+++++++++|++|||++ ++|.++++||.++|+++|++++++ ..+|+++++++. + +|+|+|
T Consensus 2 ~~~~~~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~-~~gnv~a~~~g~~~~~~~i~l 80 (423)
T 1z2l_A 2 SLITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD-EVGNLYGRLNGTEYPQEVVLS 80 (423)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC-TTSCEEEEECCSSEEEEEEEE
T ss_pred CcccccHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe-cCCcEEEEEcCCCCCCCEEEE
Confidence 356667789999999999999988 678999999999999999998764 346999999654 3 389999
Q ss_pred eeccccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc------ccHHHHHH
Q 023838 99 RADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMIK 172 (276)
Q Consensus 99 ~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g------~g~~~~~~ 172 (276)
.+|+||||.+. | .+.|+++++++++++.|++.+.+++++|.|+|+++||++ .|++.+..
T Consensus 81 ~~H~D~Vp~~g---~------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 81 GSHIDTVVNGG---N------------LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFG 145 (423)
T ss_dssp EEECCCCTTBC---S------------STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTT
T ss_pred EEecCCCCCCC---c------------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHc
Confidence 99999999641 2 255788999999999999988789999999999999984 38888875
Q ss_pred ----c--------------------CCC---------CCCcEEEEEeccCCC---Cccc-EEeeccceeeeEEEEEEEEE
Q 023838 173 ----E--------------------GAL---------GDSEAIFGMHIDVGI---PTGS-IASISGPHLAATSVFNVKVE 215 (276)
Q Consensus 173 ----~--------------------~~~---------~~~d~~i~~~~~~~~---p~~~-~~~~~~~~~~G~~~~~i~~~ 215 (276)
+ |+. +++|+++.+|.+++. |++. ..+ ..+++|..+++|+++
T Consensus 146 ~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~--~~~~~g~~~~~i~v~ 223 (423)
T 1z2l_A 146 LANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGV--VNAIVGQRRYTVTLN 223 (423)
T ss_dssp CCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEE--EEEECEEEEEEEEEE
T ss_pred CCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEE--EeeEecceEEEEEEE
Confidence 2 221 146788888876641 2221 111 234679999999999
Q ss_pred ccCCCcC-CCC-CCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 216 GRGGHAA-MPH-STIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 216 G~~~Hs~-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
|+++||| .|+ .|+||+..+++++..|+++..+ .++ .++++++.|++|+.+.|+||++|
T Consensus 224 G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~~--~~~~~vg~i~gg~~~~NvIP~~a 283 (423)
T 1z2l_A 224 GESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MGD--PLVLTFGKVEPRPNTVNVVPGKT 283 (423)
T ss_dssp CCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HCT--TCEEECCCEEEESCCTTEECCEE
T ss_pred eEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cCC--CceEEEEEEeecCCcceeECCEE
Confidence 9999999 796 8999999999999999987654 232 67999999999757999999975
No 25
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=4.8e-32 Score=253.50 Aligned_cols=220 Identities=15% Similarity=0.121 Sum_probs=177.9
Q ss_pred hHHHHHHHHHHh-hhCCCC-----------------CCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC-CCceE
Q 023838 36 DKDWLVSVRRQI-HENPEL-----------------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVV 96 (276)
Q Consensus 36 ~~~~~~~~~~~l-~~ips~-----------------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i 96 (276)
+.+++++++++| ++|||+ +++|.++++||.++|+++|++++.+ ..+|+++++++. ++|+|
T Consensus 30 ~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i 108 (474)
T 2v8h_A 30 ASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPT 108 (474)
T ss_dssp CTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCE
T ss_pred CHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeE
Confidence 457899999999 999987 3578999999999999999988764 456899999654 45799
Q ss_pred EEeeccccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCc-----c-ccHHHH
Q 023838 97 VLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEG-----G-AGAFHM 170 (276)
Q Consensus 97 ~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~-----g-~g~~~~ 170 (276)
+|+||+||||++. | .++|++++++|++++.|++.+.+++++|.|+|++|||+ | .|++.+
T Consensus 109 ~l~~H~DtVp~~g---~------------~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l 173 (474)
T 2v8h_A 109 ATGSHLDTQPEAG---K------------YDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVW 173 (474)
T ss_dssp EEEECCCCCSSBC---S------------STTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHH
T ss_pred EEEEecccCCCCC---C------------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHH
Confidence 9999999999752 3 16788999999999999998888899999999999998 3 488887
Q ss_pred HH---------------------------cCCC---------CCCcEEEEEeccCCCCccc--EEeeccceeeeEEEEEE
Q 023838 171 IK---------------------------EGAL---------GDSEAIFGMHIDVGIPTGS--IASISGPHLAATSVFNV 212 (276)
Q Consensus 171 ~~---------------------------~~~~---------~~~d~~i~~~~~~~~p~~~--~~~~~~~~~~G~~~~~i 212 (276)
.. .|+. +++|+.+.+|.+++.+.+. .......+.+|..+++|
T Consensus 174 ~~~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i 253 (474)
T 2v8h_A 174 SHDLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKV 253 (474)
T ss_dssp TTSSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEE
T ss_pred HhccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEE
Confidence 53 1221 3578888888766532111 00111234579999999
Q ss_pred EEEccCCCcC-CCC-CCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 213 KVEGRGGHAA-MPH-STIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 213 ~~~G~~~Hs~-~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
+++|+++||| .|+ .++||+..+++++..|+++..+. .+++++|.|++|+.+.|+||++|
T Consensus 254 ~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a 314 (474)
T 2v8h_A 254 TVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEV 314 (474)
T ss_dssp EEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEE
T ss_pred EEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEE
Confidence 9999999999 697 79999999999999998876542 67999999999757999999975
No 26
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=4.5e-31 Score=242.37 Aligned_cols=218 Identities=18% Similarity=0.248 Sum_probs=176.9
Q ss_pred HHHHHHHHHHhhhCCCC----------CCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC-C-CceEEEeecccc
Q 023838 37 KDWLVSVRRQIHENPEL----------LFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-S-RPVVVLRADMDA 104 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~~~i~l~~H~Dt 104 (276)
.+++++++++|++|||+ |++|.++++||.++|+++|++++++ ..+|+++++++. + +|+|+|.+|+||
T Consensus 4 ~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnv~a~~~g~~~~~~~i~l~aH~D~ 82 (408)
T 3n5f_A 4 GERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYED-AAGNLIGRKEGTNPDATVVLVGSHLDS 82 (408)
T ss_dssp HHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEEC-TTCCEEEEECCSSTTSCEEEEEEESCC
T ss_pred HHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCCEEEEecCCCCCCCEEEEEecCCC
Confidence 47889999999999993 6889999999999999999998874 456999999764 3 699999999999
Q ss_pred CCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc------ccHHHHHH------
Q 023838 105 LPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG------AGAFHMIK------ 172 (276)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g------~g~~~~~~------ 172 (276)
||.+ | ..++|+++++++++++.|++.+.+++++|.|+|+++||.+ .|++.++.
T Consensus 83 v~~~------------g---~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~ 147 (408)
T 3n5f_A 83 VYNG------------G---CFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEA 147 (408)
T ss_dssp CTTB------------C---SSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGG
T ss_pred CCCC------------C---ccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHH
Confidence 9963 1 1256788999999999999988789999999999999963 48888872
Q ss_pred -----------------cCC----C-----C--CCcEEEEEeccCCC---Ccc-cEEeeccceeeeEEEEEEEEEccCCC
Q 023838 173 -----------------EGA----L-----G--DSEAIFGMHIDVGI---PTG-SIASISGPHLAATSVFNVKVEGRGGH 220 (276)
Q Consensus 173 -----------------~~~----~-----~--~~d~~i~~~~~~~~---p~~-~~~~~~~~~~~G~~~~~i~~~G~~~H 220 (276)
.|+ + + ++|+++.+|++++. +.+ .+.+ ..+++|..+++|+++|+++|
T Consensus 148 ~~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi--~~~~~g~~~~~i~v~G~~~H 225 (408)
T 3n5f_A 148 LECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGI--VTGIAGLIWVKFTIEGKAEH 225 (408)
T ss_dssp GSCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEE--EEEECEEEEEEEEEECCCEE
T ss_pred hhccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEE--EEEeccceEEEEEEEEEcCc
Confidence 222 1 2 57888999987641 111 1211 12477999999999999999
Q ss_pred c-CCCC-CCCcHHHHHHHHHHHHHHhHhhccCCCCCceEEEEEEEeeCCccccCCCCC
Q 023838 221 A-AMPH-STIDPILTASSVILALQQLISREADPLQSLVCLSLLLSIYSETCELLPLKA 276 (276)
Q Consensus 221 s-~~p~-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~~~i~~g~~~~nvIP~~a 276 (276)
+ +.|+ .|+||+..+++++..|+++.. +.+ ++++++|.|++|+.+.|+||++|
T Consensus 226 ags~P~~~g~nAi~~aa~~i~~l~~~~~-~~~---~~~~~vg~i~gG~~~~NvIP~~a 279 (408)
T 3n5f_A 226 AGATPMSLRRDPMAAAAQIIIVIEEEAR-RTG---TTVGTVGQLHVYPGGINVIPERV 279 (408)
T ss_dssp TTTSCTTTCCCHHHHHHHHHHHHHHHHH-HHS---SCEEEEEEEEEESCCTTEECSEE
T ss_pred CCCCccccccCHHHHHHHHHHHHHHHHH-hcC---CcEEEEEEEEecCCCCcCcCCeE
Confidence 9 5895 899999999999999998763 332 78999999999757999999975
No 27
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.98 E-value=7.5e-31 Score=244.94 Aligned_cols=209 Identities=16% Similarity=0.141 Sum_probs=162.4
Q ss_pred HHHHHHhhHHHHHHHHHHhhhCCCCCCcH------------HHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceE
Q 023838 29 VMISAQQDKDWLVSVRRQIHENPELLFEE------------HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVV 96 (276)
Q Consensus 29 i~~~i~~~~~~~~~~~~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i 96 (276)
+.++++++++++++++++|++|||+|++| .++++||.++|+++|++++.. +..++++.++ .++|+|
T Consensus 5 ~~~~~~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g-~~~~~i 82 (470)
T 1lfw_A 5 FKELAEAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFG-AGDKRL 82 (470)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEEC-CCSSEE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeC-CCCCeE
Confidence 56778889999999999999999999876 789999999999999988764 4567888874 335899
Q ss_pred EEeeccccCCCcCCCCC---ccccc--cCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccH
Q 023838 97 VLRADMDALPLQELVEW---EHKSK--IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGA 167 (276)
Q Consensus 97 ~l~~H~DtVp~~~~~~w---~~~~~--~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~ 167 (276)
+|++|+||||+++ .| ||.+. .||++||||+ |+++++++++++.|++.+.+++++|.|+|+++||+| .|+
T Consensus 83 ~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~G~ 160 (470)
T 1lfw_A 83 GIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWVGI 160 (470)
T ss_dssp EEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCHHH
T ss_pred EEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCccH
Confidence 9999999999865 56 56654 6999999995 799999999999999988888999999999999987 799
Q ss_pred HHHHHcCCCCC----CcE----EEE--------EeccCCCC-ccc---EEeeccc-------------------------
Q 023838 168 FHMIKEGALGD----SEA----IFG--------MHIDVGIP-TGS---IASISGP------------------------- 202 (276)
Q Consensus 168 ~~~~~~~~~~~----~d~----~i~--------~~~~~~~p-~~~---~~~~~~~------------------------- 202 (276)
+.+++++...+ .|. ++. ++..+ .+ .+. .....|.
T Consensus 161 ~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~-~~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 239 (470)
T 1lfw_A 161 DYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKN-DDTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKLAY 239 (470)
T ss_dssp HHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECC-CCCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHHHH
T ss_pred HHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEcc-CCcCCCcceeeeecCCcCCcccccceEEecccchHHHHHHH
Confidence 99998753311 222 111 11100 00 000 0000000
Q ss_pred -------eeeeEE-----EEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHHH
Q 023838 203 -------HLAATS-----VFNVKVEGRGGHAAMPHSTIDPILTASSVILALQ 242 (276)
Q Consensus 203 -------~~~G~~-----~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l~ 242 (276)
+.+|.. +++|+++|+++|++.|+.|+||+..+++++..|+
T Consensus 240 ~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~ 291 (470)
T 1lfw_A 240 ESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYA 291 (470)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSC
T ss_pred HHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCC
Confidence 124654 8999999999999999999999999999998875
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.95 E-value=3.5e-28 Score=202.06 Aligned_cols=170 Identities=15% Similarity=0.157 Sum_probs=134.2
Q ss_pred HHHHHHHHHHhhhCCCCCC--cHHHHHHHHHHHHHhcCCCeeecc---CCceEEEEEcCC-C-CceEEEeeccccCCCcC
Q 023838 37 KDWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYPV---AKTGIVAQIGSG-S-RPVVVLRADMDALPLQE 109 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~-~-~~~i~l~~H~DtVp~~~ 109 (276)
.+++++++++|++|||+|+ +|.++++||+++|+++|+++++.. +++|+++++++. + .|+|+|.||+||||+++
T Consensus 9 ~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~ 88 (198)
T 1q7l_A 9 EHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK 88 (198)
T ss_dssp CCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG
T ss_pred HHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc
Confidence 3578999999999999998 689999999999999999887642 567999999653 3 48999999999999864
Q ss_pred CCCCc---cccc--cCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--ccHHHHHHcCCC--C
Q 023838 110 LVEWE---HKSK--IDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--AGAFHMIKEGAL--G 177 (276)
Q Consensus 110 ~~~w~---~~~~--~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--~g~~~~~~~~~~--~ 177 (276)
..|. |.+. .+|++||||+ |+++++++.+++.|++.+.+++++|.|+|+++||.| .|++++++++.+ .
T Consensus 89 -~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~ 167 (198)
T 1q7l_A 89 -EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHAL 167 (198)
T ss_dssp -GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTT
T ss_pred -ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccC
Confidence 3574 5443 4899999995 799999999999999988778999999999999986 699999876432 1
Q ss_pred CCcEEEEEeccCCCCcccEEeeccceeeeEEEEE
Q 023838 178 DSEAIFGMHIDVGIPTGSIASISGPHLAATSVFN 211 (276)
Q Consensus 178 ~~d~~i~~~~~~~~p~~~~~~~~~~~~~G~~~~~ 211 (276)
++|+++ +...++|++...+ ..+++|..+++
T Consensus 168 ~~~~~i--d~g~~ept~~~~v--~~~~kG~~~~~ 197 (198)
T 1q7l_A 168 RAGFAL--DEGIANPTDAFTV--FYSERSPWWVR 197 (198)
T ss_dssp CEEEEE--ECCCCCSSSSEEE--EECCSSCGGGC
T ss_pred CcCEEE--ecCccCCCCCceE--EEEccEEEEEE
Confidence 345555 3334678774333 23567776654
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.95 E-value=5.2e-27 Score=203.96 Aligned_cols=150 Identities=21% Similarity=0.327 Sum_probs=126.9
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeec--cCCceEEEEEcCCCCceEEEeeccccCCCcCCCCCc
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (276)
.+++++++++|++|||+|++|.++++||.++|+++|+++++. .+++|++++++ .++|+|+|+||+||||+++...|.
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEEC-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeC-CCCCEEEEEeeecccCCCCccccc
Confidence 468999999999999999999999999999999999988764 25689999984 346899999999999998777785
Q ss_pred ---ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc--cHHHHHHcC--CCCCCcEEE
Q 023838 115 ---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGA--GAFHMIKEG--ALGDSEAIF 183 (276)
Q Consensus 115 ---~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~--g~~~~~~~~--~~~~~d~~i 183 (276)
|.+ +.+|++||||+ |+++++++.+++.|++.+.+++++|.|+|+++||.|. |++.+++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 443 46899999997 6999999999999998777789999999999999884 999988631 123588999
Q ss_pred EEec
Q 023838 184 GMHI 187 (276)
Q Consensus 184 ~~~~ 187 (276)
+.++
T Consensus 164 ~~Ep 167 (269)
T 4h2k_A 164 VGEP 167 (269)
T ss_dssp ECCC
T ss_pred EECC
Confidence 8554
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.94 E-value=1.1e-26 Score=201.71 Aligned_cols=150 Identities=17% Similarity=0.254 Sum_probs=125.8
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeec--cCCceEEEEEcCCCCceEEEeeccccCCCcCCCCCc
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYP--VAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWE 114 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~ 114 (276)
.+++++++++|++|||+|++|.++++||.++|+++|+++++. .+++|++++++ .++|+|+|+||+||||+++...|.
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g-~~~~~i~l~~H~D~vp~~~~~~w~ 83 (268)
T 3t68_A 5 DSPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRG-TQSPLFVFAGHTDVVPAGPLSQWH 83 (268)
T ss_dssp CCHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEEC-SSSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeC-CCCCeEEEEccccccCCCCcccCC
Confidence 367899999999999999999999999999999999987653 35689999984 346899999999999998877885
Q ss_pred ---ccc-ccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCccc--cHHHHHHcC--CCCCCcEEE
Q 023838 115 ---HKS-KIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGGA--GAFHMIKEG--ALGDSEAIF 183 (276)
Q Consensus 115 ---~~~-~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~--g~~~~~~~~--~~~~~d~~i 183 (276)
|.+ +.+|++||||+ |+++++++.+++.|++.+.+++++|.|+|+++||.|. |++++++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (268)
T 3t68_A 84 TPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCI 163 (268)
T ss_dssp SCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 443 56899999987 7999999999999988877789999999999999884 999988642 123588999
Q ss_pred EEec
Q 023838 184 GMHI 187 (276)
Q Consensus 184 ~~~~ 187 (276)
+.++
T Consensus 164 ~~ep 167 (268)
T 3t68_A 164 VGEP 167 (268)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 8543
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=9.3e-21 Score=169.78 Aligned_cols=161 Identities=12% Similarity=0.115 Sum_probs=120.1
Q ss_pred HHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC-CCceEEEeeccccCCCc-------------
Q 023838 43 VRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALPLQ------------- 108 (276)
Q Consensus 43 ~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~~------------- 108 (276)
++++|+++||+|++|.+++++|+++|+++|++++.+ ..+|+++.+++. +.|+|+|.||+|+||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD-VLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-CCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 588999999999999999999999999999988774 457999998654 34899999999999930
Q ss_pred CCCCCccc---c------------------------------------------------cc-C-------------Cee
Q 023838 109 ELVEWEHK---S------------------------------------------------KI-D-------------GKM 123 (276)
Q Consensus 109 ~~~~w~~~---~------------------------------------------------~~-~-------------g~l 123 (276)
...+|... . +. + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 01245322 1 11 4 899
Q ss_pred ecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEeccCCCCcccEEeec
Q 023838 124 HACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHIDVGIPTGSIASIS 200 (276)
Q Consensus 124 ~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~~~~~p~~~~~~~~ 200 (276)
|||.. |+++++++.+++.|+ +++++|.|+|+++||.| .|++++.+. . +.|+++++++.. .
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~~~-----~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ--L-KPTCAIVVETTT-----A----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH--H-CCSEEEEEEEEE-----E-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc--c-CCCEEEEEeccc-----C-----
Confidence 99833 799999999998876 47899999999999998 788888764 2 467888754210 0
Q ss_pred cceeeeEEEEEEEEEccCCCcCCCCCCCcHHH
Q 023838 201 GPHLAATSVFNVKVEGRGGHAAMPHSTIDPIL 232 (276)
Q Consensus 201 ~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~ 232 (276)
+ ++.|+++|++.|+.|.|++.
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i 245 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAI 245 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEE
T ss_pred -----C------CCCCCccccCCcccCCCcEE
Confidence 0 45788889888888777643
No 32
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.79 E-value=3.9e-19 Score=159.74 Aligned_cols=142 Identities=14% Similarity=0.184 Sum_probs=112.4
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC-CCceEEEeeccccCC---------
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALP--------- 106 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp--------- 106 (276)
++++++++++|+++||+|++|.++++|+.++|+++|++++++ ..+|+++++++. +.|+|+|.||+|||+
T Consensus 5 ~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~ 83 (349)
T 2gre_A 5 TKETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPD 83 (349)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCC
Confidence 467899999999999999999999999999999999998775 567999999654 358999999999993
Q ss_pred -------CcCCCCCcccc--------------------------------------------------------------
Q 023838 107 -------LQELVEWEHKS-------------------------------------------------------------- 117 (276)
Q Consensus 107 -------~~~~~~w~~~~-------------------------------------------------------------- 117 (276)
.+ +|...+
T Consensus 84 G~l~~~~~G---g~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi 160 (349)
T 2gre_A 84 GRLSLSMIG---GFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGI 160 (349)
T ss_dssp SCEEEEEES---SCCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTC
T ss_pred CeEEEEecC---CCccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCC
Confidence 32 232110
Q ss_pred --------------ccCCeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCc
Q 023838 118 --------------KIDGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSE 180 (276)
Q Consensus 118 --------------~~~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d 180 (276)
..+|++|||+. |+++++++.+++.|++.+.+++++|.|+|+++||.| .|++.+ . .++|
T Consensus 161 ~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~--~---~~~~ 235 (349)
T 2gre_A 161 EVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI--P---EETV 235 (349)
T ss_dssp CTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC--C---TTEE
T ss_pred CCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc--c---cCCC
Confidence 02478888754 799999999999998877778899999999999988 677765 1 2478
Q ss_pred EEEEEec
Q 023838 181 AIFGMHI 187 (276)
Q Consensus 181 ~~i~~~~ 187 (276)
++++++.
T Consensus 236 ~~i~~D~ 242 (349)
T 2gre_A 236 EYLAVDM 242 (349)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 8888654
No 33
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.77 E-value=1.1e-18 Score=152.44 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=110.8
Q ss_pred HHHHHHHHHHhhhCCCCCC--------cHHHHHHHHHHHHHhcCCCeeeccC------CceEEEEEcCC-CCceEEEeec
Q 023838 37 KDWLVSVRRQIHENPELLF--------EEHNTSALIRRELDKLGIPYAYPVA------KTGIVAQIGSG-SRPVVVLRAD 101 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~--------~e~~~~~~l~~~l~~~G~~~~~~~~------~~nvia~~~~~-~~~~i~l~~H 101 (276)
.+++++++++|++|||+++ .|.++++||.++|+++|++++.+.. .+|+++++++. ++++|+|.+|
T Consensus 6 ~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH 85 (284)
T 1tkj_A 6 LANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAH 85 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEee
Confidence 4678999999999998886 6889999999999999998876421 46999999764 4589999999
Q ss_pred cccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCC---CC
Q 023838 102 MDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGA---LG 177 (276)
Q Consensus 102 ~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~---~~ 177 (276)
+|+||.+. -..++|++++++|.+++.|++.+.+++++|.|+|+++||.| .|+++++++.. ..
T Consensus 86 ~D~v~~g~--------------Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~ 151 (284)
T 1tkj_A 86 LDSVSSGA--------------GINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSADRS 151 (284)
T ss_dssp CCCCTTSC--------------CTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHHHT
T ss_pred cCCCCCCC--------------CCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccchhh
Confidence 99999621 02355799999999999999887778999999999999998 79999987632 12
Q ss_pred CCcEEEEEe
Q 023838 178 DSEAIFGMH 186 (276)
Q Consensus 178 ~~d~~i~~~ 186 (276)
++++++.++
T Consensus 152 ~~~~~i~~D 160 (284)
T 1tkj_A 152 KLAGYLNFD 160 (284)
T ss_dssp TEEEEEEEC
T ss_pred cEEEEEEec
Confidence 456666654
No 34
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.77 E-value=5e-18 Score=153.85 Aligned_cols=144 Identities=10% Similarity=0.154 Sum_probs=114.3
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC-CCceEEEeeccccCCC---------
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG-SRPVVVLRADMDALPL--------- 107 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~i~l~~H~DtVp~--------- 107 (276)
+++++++++|+++||+|++|.+++++|+++|+++|++++.+ ..+|+++.+++. ..|+|+|.||+||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 46889999999999999999999999999999999998764 567999988654 4589999999999992
Q ss_pred ------------------------cCC--C---CCc----ccc----------------------------c--------
Q 023838 108 ------------------------QEL--V---EWE----HKS----------------------------K-------- 118 (276)
Q Consensus 108 ------------------------~~~--~---~w~----~~~----------------------------~-------- 118 (276)
.+. . .|. +.+ .
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 110 0 021 100 0
Q ss_pred --------cCCeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEec
Q 023838 119 --------IDGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (276)
Q Consensus 119 --------~~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~ 187 (276)
.+|++|||+. |+++++++.+++.|++.+ ++++|.|+|+++||.| .|++.+... + +.|+++++++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~--~-~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT--I-QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc--c-CCCEEEEEec
Confidence 1689999865 799999999999998754 6799999999999998 788887543 2 4688888764
No 35
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.76 E-value=4.5e-18 Score=151.75 Aligned_cols=137 Identities=19% Similarity=0.263 Sum_probs=111.7
Q ss_pred HHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCC-------------
Q 023838 40 LVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP------------- 106 (276)
Q Consensus 40 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp------------- 106 (276)
+++++++|+++||+|++|.+++++|+++|+++|+ ++. +..+|+++.++++ .|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6789999999999999999999999999999999 665 4678999998663 58999999999995
Q ss_pred ---CcCCCCCc---------------------------------------------------------------------
Q 023838 107 ---LQELVEWE--------------------------------------------------------------------- 114 (276)
Q Consensus 107 ---~~~~~~w~--------------------------------------------------------------------- 114 (276)
.+. |.
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 332 21
Q ss_pred -cccccCCeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEec
Q 023838 115 -HKSKIDGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (276)
Q Consensus 115 -~~~~~~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~ 187 (276)
|....+|++|||.. |+++++++.+++.|++.+ ++++|.|+|+++||.| .|++++... + +.|+++++++
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~ 229 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDS 229 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECC
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEec
Confidence 11124689999833 799999999999988754 6799999999999998 788888642 2 4788888754
No 36
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.74 E-value=1e-17 Score=147.34 Aligned_cols=153 Identities=11% Similarity=0.115 Sum_probs=115.8
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHhhhCCC---CCCcHHHHHHHHHHHHHhcCC--C-eeecc------CCceEEEEEc
Q 023838 22 DEILTNQVMISAQQDKDWLVSVRRQIHENPE---LLFEEHNTSALIRRELDKLGI--P-YAYPV------AKTGIVAQIG 89 (276)
Q Consensus 22 ~~~~~~~i~~~i~~~~~~~~~~~~~l~~ips---~s~~e~~~~~~l~~~l~~~G~--~-~~~~~------~~~nvia~~~ 89 (276)
.+...+++...++ .+++++++++|+++|+ .|..|.++++||.++|+++|+ + ++.+. ..+|++++++
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~ 83 (299)
T 1rtq_A 6 QQATVTAWLPQVD--ASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTIT 83 (299)
T ss_dssp CHHHHHHHGGGCC--HHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEEC
T ss_pred chHHHHHHHHhcC--HHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEE
Confidence 3344444444443 4789999999999985 356788999999999999874 3 33221 2479999997
Q ss_pred CC--CCceEEEeeccccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc
Q 023838 90 SG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (276)
Q Consensus 90 ~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 164 (276)
+. +.++|+|.||+||||. .|.. +++||+|+ |+++++++.+++.|++.+.+++++|.|+|+++||.|
T Consensus 84 g~~~~~~~v~l~aH~D~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g 154 (299)
T 1rtq_A 84 GSEAPDEWIVIGGHLDSTIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVG 154 (299)
T ss_dssp CSSEEEEEEEEEEECCCCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred CCCCCCCEEEEEeccccCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCC
Confidence 64 3588999999999983 4643 56788887 799999999999999887778999999999999998
Q ss_pred -ccHHHHHHcCC--CCCCcEEEEE
Q 023838 165 -AGAFHMIKEGA--LGDSEAIFGM 185 (276)
Q Consensus 165 -~g~~~~~~~~~--~~~~d~~i~~ 185 (276)
.|+++++++.. ..++++++.+
T Consensus 155 ~~Gs~~~~~~~~~~~~~~~~~i~~ 178 (299)
T 1rtq_A 155 LRGSQDLANQYKSEGKNVVSALQL 178 (299)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred chhHHHHHHhhhhccccEEEEEEe
Confidence 79998876421 2234555554
No 37
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.70 E-value=1e-16 Score=144.12 Aligned_cols=136 Identities=16% Similarity=0.172 Sum_probs=108.7
Q ss_pred HHHHHHHhhhCCCCCCcH-HHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCC------------
Q 023838 40 LVSVRRQIHENPELLFEE-HNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP------------ 106 (276)
Q Consensus 40 ~~~~~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp------------ 106 (276)
+++++++|+++||+|++| .+++++|+++|+++|++++.+ ...|+++.+++. .|+|+|.||+|||+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 578999999999999999 999999999999999998764 578999998655 58999999999995
Q ss_pred ----CcCCCCCccc------------------------------------------------------------------
Q 023838 107 ----LQELVEWEHK------------------------------------------------------------------ 116 (276)
Q Consensus 107 ----~~~~~~w~~~------------------------------------------------------------------ 116 (276)
.+. |.+.
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 321 1100
Q ss_pred -------cccCCeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEe
Q 023838 117 -------SKIDGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMH 186 (276)
Q Consensus 117 -------~~~~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~ 186 (276)
...++++|||.. |+++++++.+++.|++ +++++.|+|+++||.| .|++.+... + +.|++++++
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~--~-~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG--I-EPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc--c-CCCEEEEEe
Confidence 001457888733 7999999999988764 6789999999999998 788888643 2 468888876
Q ss_pred c
Q 023838 187 I 187 (276)
Q Consensus 187 ~ 187 (276)
+
T Consensus 236 ~ 236 (353)
T 1y0y_A 236 V 236 (353)
T ss_dssp E
T ss_pred c
Confidence 5
No 38
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.65 E-value=4.1e-15 Score=131.20 Aligned_cols=143 Identities=17% Similarity=0.099 Sum_probs=108.8
Q ss_pred HHHHHHHHHhhhCCC---CCCcHHHHHHHHHHHHHhcCCCeeecc-------C----CceEEEEEcCCCCceEEEeeccc
Q 023838 38 DWLVSVRRQIHENPE---LLFEEHNTSALIRRELDKLGIPYAYPV-------A----KTGIVAQIGSGSRPVVVLRADMD 103 (276)
Q Consensus 38 ~~~~~~~~~l~~ips---~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nvia~~~~~~~~~i~l~~H~D 103 (276)
+++++.+++|+++.+ .|..+.++++||.++|+++|++++.+. + ..||++++++.+.+.|++.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 567777777776633 345678999999999999999886531 1 37999999876568999999999
Q ss_pred cCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc--------------cc
Q 023838 104 ALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--------------AG 166 (276)
Q Consensus 104 tVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--------------~g 166 (276)
+||.++.. ++. ..+|++| +|+ ++++|++|++++.|++.+ ++++|.|+|..+||.| .|
T Consensus 105 sv~~~~~~--p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDHD--PDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTTC--SSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCCC--ccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 99976422 332 3456666 565 689999999999998874 7899999999999986 58
Q ss_pred HHHHHHcCCC--CCCcEEEEEe
Q 023838 167 AFHMIKEGAL--GDSEAIFGMH 186 (276)
Q Consensus 167 ~~~~~~~~~~--~~~d~~i~~~ 186 (276)
++++.++... .++.+++.++
T Consensus 179 S~~~~~~~~~~~~~~~~~inlD 200 (309)
T 3tc8_A 179 TQFWAKNPHVPNYTAEYGILLD 200 (309)
T ss_dssp HHHHHHSCSSTTCCCSEEEEEE
T ss_pred HHHHHhCCCccccceEEEEEec
Confidence 9999876432 2355555543
No 39
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.65 E-value=8.5e-16 Score=137.66 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=107.6
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCCCc---------
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQ--------- 108 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~--------- 108 (276)
.++++++++|+++||+|++|.+++++|+++|+++|++++.+ ..+|+++.+++.+.|.|+|.||+|||+..
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 35788999999999999999999999999999999998764 56799999865435899999999999520
Q ss_pred ---CCCCCcccc-----------------------------------------------------------------ccC
Q 023838 109 ---ELVEWEHKS-----------------------------------------------------------------KID 120 (276)
Q Consensus 109 ---~~~~w~~~~-----------------------------------------------------------------~~~ 120 (276)
....|.+.. ..+
T Consensus 84 ~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g 163 (346)
T 1vho_A 84 RLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETN 163 (346)
T ss_dssp EEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEET
T ss_pred EEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchhhhc
Confidence 011232110 002
Q ss_pred CeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEec
Q 023838 121 GKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (276)
Q Consensus 121 g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~ 187 (276)
|+++|++. +.++++++.+++.+++.+ +++++.++|+.+||.| .|+..... . . ..|++++++.
T Consensus 164 ~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~-~-i-~~~~~i~~D~ 228 (346)
T 1vho_A 164 GKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY-E-I-NPDAAIVMDV 228 (346)
T ss_dssp TEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC-C-C-CCSEEEEEEE
T ss_pred CeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc-c-c-CCCEEEEeec
Confidence 56777766 588899999998887643 6689999999999998 67765432 1 2 4678887664
No 40
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.65 E-value=7.4e-19 Score=154.78 Aligned_cols=185 Identities=13% Similarity=0.069 Sum_probs=107.0
Q ss_pred HHHHHHhhhCCCCCCcHH-HHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCCCcCCCCCcccccc
Q 023838 41 VSVRRQIHENPELLFEEH-NTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPLQELVEWEHKSKI 119 (276)
Q Consensus 41 ~~~~~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~ 119 (276)
+++|++|+++||+|++|. ++++||+++|+++|++++++ ..+|++++++++ +|+|+|.||+||||...... ..
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~-----~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHI-----DK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEEE-----CT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCee-----ec
Confidence 478999999999999875 69999999999999998874 567999999765 58999999999999643211 23
Q ss_pred CCeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEeccCCCCcccE
Q 023838 120 DGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHIDVGIPTGSI 196 (276)
Q Consensus 120 ~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~~~~~p~~~~ 196 (276)
+|.+++++. +.+.++...++..+.+. ..+...+.++++.+||.+ .+.+.+.......+..+... ++....
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~------~~~~~~ 157 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEK-GERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSK------EEAEEM 157 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETT-EEEEEEECCCCGGGC---------CCGGGCCEECSCSSH------HHHHHT
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhcc-CCccceEEEeeeeeEecccccccchhhhhhhhhhcccch------hhhhcc
Confidence 566655432 22222222122112222 235677888889999987 55555443322211111110 000000
Q ss_pred EeeccceeeeEEEEEEEEEccCCCcCCCCCCCcHHHHHHHHHHHH
Q 023838 197 ASISGPHLAATSVFNVKVEGRGGHAAMPHSTIDPILTASSVILAL 241 (276)
Q Consensus 197 ~~~~~~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~i~~l 241 (276)
.. .....+......++.+...|++.+..+.+++..+..++.+|
T Consensus 158 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (354)
T 2wzn_A 158 GF--RVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQL 200 (354)
T ss_dssp TC--CTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHC
T ss_pred cc--ccceeeeeeeeeEeecccccccccccccchhhhHHHHHHHH
Confidence 00 11233555666777788888877765555555544444443
No 41
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.63 E-value=3.8e-15 Score=133.44 Aligned_cols=140 Identities=13% Similarity=0.225 Sum_probs=107.3
Q ss_pred HHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCCC--------c-----
Q 023838 42 SVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL--------Q----- 108 (276)
Q Consensus 42 ~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~--------~----- 108 (276)
+++++|+++||+|++|.++++||.++|+++|++++.+ ..+|+++.+++.+.|+|+|.||+|||+. +
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 7899999999999999999999999999999998764 5679999986544589999999999961 0
Q ss_pred CCCCCcc---------------------------------------------------------------ccccCCeeec
Q 023838 109 ELVEWEH---------------------------------------------------------------KSKIDGKMHA 125 (276)
Q Consensus 109 ~~~~w~~---------------------------------------------------------------~~~~~g~l~g 125 (276)
....|.+ ....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0001210 0014578888
Q ss_pred CCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEec
Q 023838 126 CGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMHI 187 (276)
Q Consensus 126 ~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~~ 187 (276)
++. +.++++++.+++.+++.. +++++.++|+++||.| .|+...... + ..|++++++.
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~--i-~~~~~i~~D~ 225 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA--V-SPDVAIVLDT 225 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH--H-CCSEEEEECC
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc--c-CCCEEEEEec
Confidence 866 689999999998887543 6789999999999988 677665442 2 3678888764
No 42
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.61 E-value=1.1e-14 Score=128.51 Aligned_cols=144 Identities=15% Similarity=0.117 Sum_probs=101.0
Q ss_pred HHHHHHHHHHhhhCCCC---CCcHHHHHHHHHHHHHhcCCCeeecc-------C----CceEEEEEcCCCCceEEEeecc
Q 023838 37 KDWLVSVRRQIHENPEL---LFEEHNTSALIRRELDKLGIPYAYPV-------A----KTGIVAQIGSGSRPVVVLRADM 102 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~---s~~e~~~~~~l~~~l~~~G~~~~~~~-------~----~~nvia~~~~~~~~~i~l~~H~ 102 (276)
.+++++.+++|+++++. |..+.++++||.++|+++|++++.+. + ..||++++++.+.+.|+|.+|+
T Consensus 26 ~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~ 105 (314)
T 3gux_A 26 ADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHW 105 (314)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEccc
Confidence 36788889999988642 34678999999999999999876531 1 3799999987656899999999
Q ss_pred ccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc---------------
Q 023838 103 DALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--------------- 164 (276)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--------------- 164 (276)
|+||.++.. ++. ..++. +.+|+ ++++|++|.+++.|++.+ ++++|.|++..+||.|
T Consensus 106 Dsv~~~~~~--p~~-~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~ 179 (314)
T 3gux_A 106 DSRPYADND--PDP-KNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWC 179 (314)
T ss_dssp CCCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSC
T ss_pred cCCCcCCCC--ccc-ccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccc
Confidence 999975421 221 22233 34565 689999999999998874 7899999999999986
Q ss_pred ccHHHHHHcCCC--CCCcEEEEEe
Q 023838 165 AGAFHMIKEGAL--GDSEAIFGMH 186 (276)
Q Consensus 165 ~g~~~~~~~~~~--~~~d~~i~~~ 186 (276)
.|++++.++... .++.+++.++
T Consensus 180 ~GS~~~~~~~~~~~~~~~~~inlD 203 (314)
T 3gux_A 180 LGSQYWARTPHVQNYNARYGILLD 203 (314)
T ss_dssp HHHHHHHHSCSSTTCCCSEEEEEE
T ss_pred hhHHHHHhCCcccccceeEEEEEe
Confidence 589999876332 2355555543
No 43
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.59 E-value=7.3e-15 Score=130.85 Aligned_cols=127 Identities=13% Similarity=0.214 Sum_probs=99.0
Q ss_pred HHHH-HHHHHHhhhCCCC-CCcHHHHHHHHHHHHHh--cCCCeeecc----------CCceEEEEEcCCCCceEEEeecc
Q 023838 37 KDWL-VSVRRQIHENPEL-LFEEHNTSALIRRELDK--LGIPYAYPV----------AKTGIVAQIGSGSRPVVVLRADM 102 (276)
Q Consensus 37 ~~~~-~~~~~~l~~ips~-s~~e~~~~~~l~~~l~~--~G~~~~~~~----------~~~nvia~~~~~~~~~i~l~~H~ 102 (276)
.+++ .+++++|+..+.+ +..+.++++||.++|++ .|++++.+. ...||++++++.+.+.|++.||+
T Consensus 30 ~~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~ 109 (329)
T 2afw_A 30 ISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHY 109 (329)
T ss_dssp HHHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEec
Confidence 4678 8888898755443 33456899999999999 999876532 14799999977556899999999
Q ss_pred ccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhc--------cCCCCceEEEEEecCCCc--------
Q 023838 103 DALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQR--------KDKLKGTVRILFQPAEEG-------- 163 (276)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~--------~~~~~~~v~~~~~~dEE~-------- 163 (276)
|+||.+ .|. |++ ++|+ ++++|++|++++.|++. +..++++|.|+|..+||.
T Consensus 110 Dsv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~ 179 (329)
T 2afw_A 110 DSKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQD 179 (329)
T ss_dssp CCCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSS
T ss_pred cCCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCc
Confidence 999975 342 443 5666 69999999999999875 246889999999999997
Q ss_pred c-ccHHHHHHc
Q 023838 164 G-AGAFHMIKE 173 (276)
Q Consensus 164 g-~g~~~~~~~ 173 (276)
| .|++++.++
T Consensus 180 gl~Gs~~~~~~ 190 (329)
T 2afw_A 180 SLYGSRHLAAK 190 (329)
T ss_dssp SCHHHHHHHHH
T ss_pred cchhHHHHHHH
Confidence 6 699988865
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.55 E-value=5.8e-15 Score=131.06 Aligned_cols=139 Identities=14% Similarity=0.024 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc------CCceEEEEEcCCCCceEEEeeccccCC----
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV------AKTGIVAQIGSGSRPVVVLRADMDALP---- 106 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~~~~~i~l~~H~DtVp---- 106 (276)
.+++++++++|+++||+|++|.+++++|+++|+++|++++++. +.+|+++.+++ + |+|+|.||+|||+
T Consensus 16 ~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v~ 93 (321)
T 3cpx_A 16 YFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTVS 93 (321)
T ss_dssp GCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEec
Confidence 3578999999999999999999999999999999999876542 15799998865 4 8899999999994
Q ss_pred -------CcCCCCCc-----cc---c----------------------------------ccCCeeecCCc--cHHHHHH
Q 023838 107 -------LQELVEWE-----HK---S----------------------------------KIDGKMHACGH--DVHTTML 135 (276)
Q Consensus 107 -------~~~~~~w~-----~~---~----------------------------------~~~g~l~g~G~--kg~~a~~ 135 (276)
.+....|. .. . ..+|+++|++. |++++++
T Consensus 94 ~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa~ 173 (321)
T 3cpx_A 94 YNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWTA 173 (321)
T ss_dssp STTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHHH
T ss_pred ccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHHH
Confidence 32211221 00 0 00266777765 6888888
Q ss_pred HHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHH---HcCCCCCCcEEEEEec
Q 023838 136 LGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMI---KEGALGDSEAIFGMHI 187 (276)
Q Consensus 136 l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~---~~~~~~~~d~~i~~~~ 187 (276)
+.+++.++ . +.++|+++||.| .|+.... .+. + +.|+++++++
T Consensus 174 l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~-~-~~~~~i~~D~ 219 (321)
T 3cpx_A 174 LELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYET-F-HVKQSLICDI 219 (321)
T ss_dssp HHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHH-H-CCCEEEECCC
T ss_pred HHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccc-c-CCCEEEEEeC
Confidence 88876543 2 999999999998 6777532 221 2 3678887654
No 45
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.45 E-value=1.8e-12 Score=116.34 Aligned_cols=143 Identities=18% Similarity=0.176 Sum_probs=105.5
Q ss_pred HHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCC--CCceEEEeeccccCCCc-----CC-
Q 023838 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSG--SRPVVVLRADMDALPLQ-----EL- 110 (276)
Q Consensus 39 ~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~-----~~- 110 (276)
++++++++|+++||+|++|.++++|++++|+++|++++++ ..+|+++++++. ++|+|+|.||+|+|+.- +.
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~G 82 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDG 82 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCCC
Confidence 5789999999999999999999999999999999988774 678999999764 36999999999999631 10
Q ss_pred -------CCCc------------------cc-------------------c-----------------------------
Q 023838 111 -------VEWE------------------HK-------------------S----------------------------- 117 (276)
Q Consensus 111 -------~~w~------------------~~-------------------~----------------------------- 117 (276)
.+|. +. +
T Consensus 83 ~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~ 162 (355)
T 3kl9_A 83 TFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIV 162 (355)
T ss_dssp CEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEEE
T ss_pred EEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEE
Confidence 1221 00 0
Q ss_pred -------cc-CCeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcCCCCCCcEEEEEe
Q 023838 118 -------KI-DGKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEGALGDSEAIFGMH 186 (276)
Q Consensus 118 -------~~-~g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~~~~~~d~~i~~~ 186 (276)
.. ++.+.++.- +.++++++.+++.+++. .++.+++++|+..||.| .|+...... + .+|.+|+++
T Consensus 163 ~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~--~-~pd~~i~~D 237 (355)
T 3kl9_A 163 PDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK--F-DPEVFLAVD 237 (355)
T ss_dssp ECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH--H-CCSEEEEEE
T ss_pred eccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc--c-CCCEEEEec
Confidence 00 013444433 47788888888887643 47899999999999999 566555433 2 367788776
Q ss_pred c
Q 023838 187 I 187 (276)
Q Consensus 187 ~ 187 (276)
.
T Consensus 238 ~ 238 (355)
T 3kl9_A 238 C 238 (355)
T ss_dssp E
T ss_pred C
Confidence 4
No 46
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=3.6e-11 Score=106.00 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhhhC-CCCCC--cHHHHHHHHHHHHHhcCCCeeec-------c----CCceEEEEEcCCCCceEEEeecc
Q 023838 37 KDWLVSVRRQIHEN-PELLF--EEHNTSALIRRELDKLGIPYAYP-------V----AKTGIVAQIGSGSRPVVVLRADM 102 (276)
Q Consensus 37 ~~~~~~~~~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~~~~~~-------~----~~~nvia~~~~~~~~~i~l~~H~ 102 (276)
.++..+.+++++++ |.+.+ ...++++||.+.|+++|++++.. . ...|||+++++...+.|++.+|+
T Consensus 24 ~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~ 103 (309)
T 4fuu_A 24 ADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHW 103 (309)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeec
Confidence 36778888888876 44433 45789999999999999987642 1 12599999987656899999999
Q ss_pred ccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc---------------
Q 023838 103 DALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG--------------- 164 (276)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g--------------- 164 (276)
|++|..+...... . +.....|+ -.++|++|++++.|.+. +++.+|.|+|...||.|
T Consensus 104 Ds~~~~~~~~~~~---~-~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l 177 (309)
T 4fuu_A 104 DTRPWADNDADEK---N-HHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWC 177 (309)
T ss_dssp CCCSCCTTCSSGG---G-TTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSC
T ss_pred CCCCCCCCccccc---c-ccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhh
Confidence 9999654221111 1 11122344 37899999999999875 47899999999999987
Q ss_pred ccHHHHHHcCCC--CCCcEEEEE
Q 023838 165 AGAFHMIKEGAL--GDSEAIFGM 185 (276)
Q Consensus 165 ~g~~~~~~~~~~--~~~d~~i~~ 185 (276)
.|++++.++... .++.+++.+
T Consensus 178 ~GS~~~~~~~~~~~~~i~~~inl 200 (309)
T 4fuu_A 178 LGSQYWSRNPHVQGYNARFGILL 200 (309)
T ss_dssp HHHHHHHHSCSSTTCCCSEEEEE
T ss_pred cchhHHHhcccccCcceEEEEee
Confidence 488888876332 235555544
No 47
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.32 E-value=8.4e-12 Score=111.87 Aligned_cols=67 Identities=18% Similarity=0.222 Sum_probs=60.2
Q ss_pred HHHHHHHHhhhCCCCCCcHH-HHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCCC
Q 023838 39 WLVSVRRQIHENPELLFEEH-NTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALPL 107 (276)
Q Consensus 39 ~~~~~~~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp~ 107 (276)
.+++++++|+++||+|+.|. ++++|++++|+++|++++.+ ..+|+++++++.+ |+|+|.||+|+|+.
T Consensus 10 ~~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~~-~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGSS-PRIMVAAHMDKIGV 77 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCSS-SEEEEECCCCBCEE
T ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCCC-CEEEEEecccccce
Confidence 46889999999999999999 99999999999999988774 6789999997654 99999999999973
No 48
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.29 E-value=6.2e-11 Score=105.40 Aligned_cols=135 Identities=21% Similarity=0.242 Sum_probs=99.8
Q ss_pred HHHHHHHHHhhhCCCCCC--cHHHHHHHHHHHHHhcCCCeeecc-----------CCceEEEEEcCCCCceEEEeecccc
Q 023838 38 DWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYPV-----------AKTGIVAQIGSGSRPVVVLRADMDA 104 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~i~l~~H~Dt 104 (276)
..+.+++..|+ +|.+.| ...++++||.++|+++|++++... ...|||+++++...+.|++.+|+|+
T Consensus 38 ~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs 116 (330)
T 4fai_A 38 LHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDS 116 (330)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCC
T ss_pred HHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeecc
Confidence 45566677664 676665 457899999999999999876421 1259999998765688999999999
Q ss_pred CCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhc---cCCCCceEEEEEecCCCcc---------ccHHH
Q 023838 105 LPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQR---KDKLKGTVRILFQPAEEGG---------AGAFH 169 (276)
Q Consensus 105 Vp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~---~~~~~~~v~~~~~~dEE~g---------~g~~~ 169 (276)
++..+. + ..|+ -.|+|++|++++.|.+. +.+++.+|.|+|..+||.| .|+++
T Consensus 117 ~~~~~~----------~---~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl~~~~~~~llGS~~ 183 (330)
T 4fai_A 117 KYMPGV----------E---FLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFEEWGPKDSIYGARH 183 (330)
T ss_dssp CCCTTS----------C---CCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSSSCBTTBSCHHHHH
T ss_pred cccccC----------C---CCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccccccccchhhhhHH
Confidence 985321 1 1243 37899999999998753 3468899999999999987 38999
Q ss_pred HHHc----CCCCCCcEEEEEe
Q 023838 170 MIKE----GALGDSEAIFGMH 186 (276)
Q Consensus 170 ~~~~----~~~~~~d~~i~~~ 186 (276)
+.++ +..+++.+++.++
T Consensus 184 ~a~~~~~~~~~~~i~~~inlD 204 (330)
T 4fai_A 184 LAKKWHHEGKLDRIDMLVLLD 204 (330)
T ss_dssp HHHHHHHTTCSTTEEEEEEEC
T ss_pred HHhcchhccchhceeEEEEec
Confidence 8864 3344566666554
No 49
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.29 E-value=4.3e-11 Score=105.57 Aligned_cols=123 Identities=16% Similarity=0.224 Sum_probs=90.7
Q ss_pred HHHHHHHhhhCCCCCC--cHHHHHHHHHHHHHhcCCCeeecc-----------CCceEEEEEcCCCCceEEEeeccccCC
Q 023838 40 LVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAYPV-----------AKTGIVAQIGSGSRPVVVLRADMDALP 106 (276)
Q Consensus 40 ~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~i~l~~H~DtVp 106 (276)
+-++|..++ +|.+++ ...++++||.++|+++|++++... ...|||+++++...+.|++.+|+|+.+
T Consensus 13 ~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~~ 91 (312)
T 4f9u_A 13 FNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKY 91 (312)
T ss_dssp HHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCCC
T ss_pred HHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecCC
Confidence 344455554 576655 357899999999999999886421 125999999876668999999999997
Q ss_pred CcCCCCCccccccCCeeecC-CccHHHHHHHHHHHHHHhc-----cCCCCceEEEEEecCCCcc---------ccHHHHH
Q 023838 107 LQELVEWEHKSKIDGKMHAC-GHDVHTTMLLGAAKLIHQR-----KDKLKGTVRILFQPAEEGG---------AGAFHMI 171 (276)
Q Consensus 107 ~~~~~~w~~~~~~~g~l~g~-G~kg~~a~~l~a~~~l~~~-----~~~~~~~v~~~~~~dEE~g---------~g~~~~~ 171 (276)
..+.. + ..|. +.-.|+|++|++++.|.+. +.+++++|.|+|..+||.| .|++++.
T Consensus 92 ~~~~~---------~-~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS~~~a 161 (312)
T 4f9u_A 92 FPNDP---------G-FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGSKHLA 161 (312)
T ss_dssp CTTCT---------T-CCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHHHHHH
T ss_pred CCCCC---------C-CCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccChHHHH
Confidence 53211 1 1122 2247899999999998753 4468899999999999976 4898888
Q ss_pred Hc
Q 023838 172 KE 173 (276)
Q Consensus 172 ~~ 173 (276)
++
T Consensus 162 ~~ 163 (312)
T 4f9u_A 162 AK 163 (312)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 50
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.28 E-value=1.8e-11 Score=108.66 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=91.6
Q ss_pred HHHHH-HHHHhhhCCCC--CCcHHHHHHHHHHHHHhc--CCCeeecc----------CCceEEEEEcCCCCceEEEeecc
Q 023838 38 DWLVS-VRRQIHENPEL--LFEEHNTSALIRRELDKL--GIPYAYPV----------AKTGIVAQIGSGSRPVVVLRADM 102 (276)
Q Consensus 38 ~~~~~-~~~~l~~ips~--s~~e~~~~~~l~~~l~~~--G~~~~~~~----------~~~nvia~~~~~~~~~i~l~~H~ 102 (276)
+++.+ .++.+ -+|.+ |..+.++++||.++|+++ |++++.+. ...||++++++...+.|++.+|+
T Consensus 39 ~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~ 117 (330)
T 3pb6_X 39 QRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHY 117 (330)
T ss_dssp HHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEecc
Confidence 45544 45555 33433 345678999999999999 78776532 12699999987656899999999
Q ss_pred ccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhc-----cCCCCceEEEEEecCCCc--------c-c
Q 023838 103 DALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQR-----KDKLKGTVRILFQPAEEG--------G-A 165 (276)
Q Consensus 103 DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~-----~~~~~~~v~~~~~~dEE~--------g-~ 165 (276)
|+||..+. +. ...|+ ..++|++|++++.|.+. +..++.+|.|+|..+||. | .
T Consensus 118 Dsv~~~~g----------~~-~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~ 186 (330)
T 3pb6_X 118 DSKLFPPG----------ST-PFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLY 186 (330)
T ss_dssp CCCCCCTT----------SC-CCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCH
T ss_pred CCCCCCCC----------Cc-CcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCc
Confidence 99984211 11 22344 47899999999999873 356899999999999998 7 7
Q ss_pred cHHHHHHc
Q 023838 166 GAFHMIKE 173 (276)
Q Consensus 166 g~~~~~~~ 173 (276)
|++++.++
T Consensus 187 GS~~~a~~ 194 (330)
T 3pb6_X 187 GSRHLAQL 194 (330)
T ss_dssp HHHHHHHH
T ss_pred cHHHHHHH
Confidence 99998764
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.24 E-value=4.4e-11 Score=106.59 Aligned_cols=66 Identities=18% Similarity=0.152 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeeccCCceEEEEEcCCCCceEEEeeccccCC
Q 023838 39 WLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPVAKTGIVAQIGSGSRPVVVLRADMDALP 106 (276)
Q Consensus 39 ~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~i~l~~H~DtVp 106 (276)
.+.++|++|+++|++|+.|.+++++++++|+++|.+++.+ ..+|+++++++ ++|+|+|.||+|+|.
T Consensus 12 ~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDevG 77 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEIG 77 (343)
T ss_dssp CCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBCE
T ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEecccccc
Confidence 4678999999999999999999999999999999888764 67899999853 469999999999995
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.82 E-value=1e-08 Score=94.01 Aligned_cols=99 Identities=15% Similarity=0.208 Sum_probs=72.9
Q ss_pred HHHHHHHHHHH---h--cCCCeeecc----CCceEEEEEcCC-----CCceEEEeeccccCCCcCCCCCccccccCCeee
Q 023838 59 NTSALIRRELD---K--LGIPYAYPV----AKTGIVAQIGSG-----SRPVVVLRADMDALPLQELVEWEHKSKIDGKMH 124 (276)
Q Consensus 59 ~~~~~l~~~l~---~--~G~~~~~~~----~~~nvia~~~~~-----~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~ 124 (276)
+.+++|.++++ + .++.+..+. ...||++++++. +.+.|++.+|+|+|+.+. -
T Consensus 172 ~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~--------------G 237 (421)
T 2ek8_A 172 QEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAP--------------G 237 (421)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCC--------------C
T ss_pred HHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCC--------------C
Confidence 35677888873 2 122222111 147999999763 458999999999999521 1
Q ss_pred cCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHc
Q 023838 125 ACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKE 173 (276)
Q Consensus 125 g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~ 173 (276)
+.+.++++++++++++.|++. .++++|.|+++.+||.| .|+++++++
T Consensus 238 a~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 238 ANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp TTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred CCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 224468999999999999874 46899999999999998 799999875
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.79 E-value=1.7e-08 Score=93.20 Aligned_cols=102 Identities=22% Similarity=0.296 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHhcC--CCeee--------ccCCceEEEEEcCC--CCceEEEeeccccCCCcCCCCCccccccCCeeec
Q 023838 58 HNTSALIRRELDKLG--IPYAY--------PVAKTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHA 125 (276)
Q Consensus 58 ~~~~~~l~~~l~~~G--~~~~~--------~~~~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g 125 (276)
.+.++.|.+.|+. | +.++. .....||++++++. +.+.|++.+|+|+++.+. -+
T Consensus 203 ~~da~~L~~~l~~-g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~--------------Ga 267 (444)
T 3iib_A 203 NPDADLINAMLKR-DKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEGT--------------GA 267 (444)
T ss_dssp HHHHHHHHHHHTT-TCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSSC--------------CT
T ss_pred HHHHHHHHHHHhC-CCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCCC--------------CC
Confidence 3556777777764 3 22211 11246999999875 358899999999998521 12
Q ss_pred CCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHHHHcC
Q 023838 126 CGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHMIKEG 174 (276)
Q Consensus 126 ~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~~~~~ 174 (276)
.+.+++++++|++++.|++.+..++++|.|+|..+||.| .|+++++++.
T Consensus 268 ~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~ 317 (444)
T 3iib_A 268 IDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEH 317 (444)
T ss_dssp TTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhh
Confidence 344689999999999999887788999999999999999 7999998764
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.28 E-value=1.6e-06 Score=84.03 Aligned_cols=77 Identities=19% Similarity=0.164 Sum_probs=63.5
Q ss_pred CceEEEEEcCC--CCceEEEeeccccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHh---ccCCCCceEEE
Q 023838 81 KTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQ---RKDKLKGTVRI 155 (276)
Q Consensus 81 ~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~---~~~~~~~~v~~ 155 (276)
..||++++++. +.+.|++.+|+|+++.| +.+...+++++|++++.|.+ .+.+++++|+|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFG----------------AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSC----------------TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCC----------------CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 36999999875 35899999999999741 33445789999999999876 35578999999
Q ss_pred EEecCCCcc-ccHHHHHHc
Q 023838 156 LFQPAEEGG-AGAFHMIKE 173 (276)
Q Consensus 156 ~~~~dEE~g-~g~~~~~~~ 173 (276)
++..+||.| .|+.+++++
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp EEESCGGGTSHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHh
Confidence 999999998 799998864
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.23 E-value=2.2e-06 Score=82.19 Aligned_cols=78 Identities=22% Similarity=0.129 Sum_probs=63.9
Q ss_pred CceEEEEEcCC--CCceEEEeeccccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhc----cCCCCceEE
Q 023838 81 KTGIVAQIGSG--SRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQR----KDKLKGTVR 154 (276)
Q Consensus 81 ~~nvia~~~~~--~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~----~~~~~~~v~ 154 (276)
..||++++++. +.+.|++.+|+|++.+| +.+...|++++|++++.|.+. +.+++++|+
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPG----------------AAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCC----------------TTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCC----------------CCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 36999999875 35889999999999532 123356899999999999864 567899999
Q ss_pred EEEecCCCcc-ccHHHHHHcC
Q 023838 155 ILFQPAEEGG-AGAFHMIKEG 174 (276)
Q Consensus 155 ~~~~~dEE~g-~g~~~~~~~~ 174 (276)
|++..+||.| .|+.+++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 9999999999 7999998764
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=91.79 E-value=0.7 Score=41.65 Aligned_cols=67 Identities=18% Similarity=0.196 Sum_probs=47.7
Q ss_pred EEEE--cCCCCceEEEeeccccCCCcCCCCCccccccCCeeecCCccHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 85 VAQI--GSGSRPVVVLRADMDALPLQELVEWEHKSKIDGKMHACGHDVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 85 ia~~--~~~~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
++.+ +|...+.|++.+|+|+ |.. +-+.-+|+|+++++++.|++. +++.++.|+|.+ |.
T Consensus 169 y~e~~ipG~t~~~IllsaH~cH-P~~----------------ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~p-g~ 228 (435)
T 3k9t_A 169 YGEYYIRGELEEEILLTTYTCH-PSM----------------CNDNLSGVALITFIAKALSKL--KTKYSYRFLFAP-ET 228 (435)
T ss_dssp EEEEEECCSSSCEEEEEEECCC-CSC----------------TTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEEC-TT
T ss_pred EEEEEecCCCCCEEEEEEEcCC-CCC----------------CCccchHHHHHHHHHHHHhcC--CCCceEEEEEcC-cc
Confidence 3444 6655699999999997 310 222236799999999998864 478999999998 22
Q ss_pred ccccHHHHHHc
Q 023838 163 GGAGAFHMIKE 173 (276)
Q Consensus 163 ~g~g~~~~~~~ 173 (276)
.|+.+++.+
T Consensus 229 --iGS~~yl~~ 237 (435)
T 3k9t_A 229 --IGSITWLSR 237 (435)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHh
Confidence 467777754
No 57
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=88.33 E-value=15 Score=33.66 Aligned_cols=111 Identities=11% Similarity=0.016 Sum_probs=68.8
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-------CCce--------------EEEEEcCC-CCce
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AKTG--------------IVAQIGSG-SRPV 95 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~n--------------via~~~~~-~~~~ 95 (276)
.+-+.+.|+|++-|.---.....+++.++.+++.|++++..+ +.+. +..+|.+. +.++
T Consensus 167 a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~~~~ 246 (491)
T 2hc9_A 167 SESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTEH 246 (491)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTCSCE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCCCCc
Confidence 466788999999887555667889999999999999887531 1111 22233221 1234
Q ss_pred EEEeeccccCCCcCCCCCccccccCCe-ee-c---CCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 96 VVLRADMDALPLQELVEWEHKSKIDGK-MH-A---CGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 96 i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-g---~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
|+|.|- +-.|++ +|. |- + .+| .+|.|+.+++++++.+.+ ++-+|..++..-|-
T Consensus 247 i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 247 IALVGK----------GVVYDT--GGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHG--FSQTLHACLCIVEN 307 (491)
T ss_dssp EEEEEE----------EEEEEC--CTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTT--CCSEEEEEEEEEEE
T ss_pred EEEEcC----------ceEecC--CCccCCCCcChhhccccccHHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 444332 111221 110 00 1 233 489999999999998764 67888888777765
No 58
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=85.80 E-value=0.61 Score=42.71 Aligned_cols=48 Identities=19% Similarity=0.140 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhcCCC-------------eeeccCCceEEEEEc-CC----CCceEEEeeccccCC
Q 023838 57 EHNTSALIRRELDKLGIP-------------YAYPVAKTGIVAQIG-SG----SRPVVVLRADMDALP 106 (276)
Q Consensus 57 e~~~~~~l~~~l~~~G~~-------------~~~~~~~~nvia~~~-~~----~~~~i~l~~H~DtVp 106 (276)
+..+.+++.++|++.||. +.. +...|.++.+. +. .+++ ++.+|+|...
T Consensus 35 ~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~-~r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 35 EREVTAYALDKAKKLGFINAEEKKNLMPGDKIFY-TCREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp HHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEEC-BCSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred HHHHHHHHHHHHHHcCCcccccccccCCCCeEEE-ECCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 568999999999999985 222 23355555543 32 2345 8999999983
No 59
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=85.54 E-value=22 Score=32.66 Aligned_cols=116 Identities=12% Similarity=0.004 Sum_probs=70.8
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhc-CCCeeecc-------C-------------Cc-eEEEEEcC-C-CC
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPV-------A-------------KT-GIVAQIGS-G-SR 93 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~-nvia~~~~-~-~~ 93 (276)
.+-+.+.|+|++-|.---.....+++.++.++++ |++++..+ + .+ -+..+|.+ + ..
T Consensus 180 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 259 (497)
T 3h8g_F 180 ATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKAD 259 (497)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 5678899999999976666778899999999998 88886521 1 11 23334432 2 23
Q ss_pred ceEEEeeccccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 94 PVVVLRADMDALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 94 ~~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
++|+|.|-==|.- ..+.+.+| .+.+ .+| .+|.|+.+++++++.+.+ ++-+|+.+...-|-
T Consensus 260 ~~i~LVGKGiTFD---sGG~slKp--~~~M--~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 260 KPFVLVGKGITFD---TGGISLKP--GAGM--DEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp CCEEEEEEEEEEE---CCTTSCCC--STTG--GGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CcEEEEcCceEec---cCCccCCC--ccch--hhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 5555554310000 00111111 0111 123 489999999999998875 66888888877765
No 60
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=85.17 E-value=15 Score=33.74 Aligned_cols=111 Identities=13% Similarity=0.045 Sum_probs=68.3
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcC--CCeeecc-------CCc--------------eEEEEEcC-C--
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLG--IPYAYPV-------AKT--------------GIVAQIGS-G-- 91 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~~--------------nvia~~~~-~-- 91 (276)
.+-+.+.|+|++-|.---.....+++.++.++++| ++++..+ +.+ -+.-+|.+ +
T Consensus 161 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 240 (484)
T 1lam_A 161 ASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNA 240 (484)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSST
T ss_pred HHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCCC
Confidence 56678999999999765666788899999999999 8776521 111 12233321 1
Q ss_pred CCceEEEeeccccCCCcCCCCCccccccCCe-e-ecCC---c---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 92 SRPVVVLRADMDALPLQELVEWEHKSKIDGK-M-HACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 92 ~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~g~G---~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
..++|+|.|- +-.|++ +|. | -+.+ | .+|.|+.+++++++.+.+ ++-+|+.+...-|-
T Consensus 241 ~~~~i~LVGK----------GITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 241 SEPPLVFVGK----------GITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp TSCCEEEEEC----------EEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCcEEEEec----------ceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1123444332 112221 110 1 0222 3 389999999999998875 67888887776665
No 61
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=85.12 E-value=16 Score=33.56 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=69.9
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhc-CCCeeecc-------C-------------Cc-eEEEEEcCC-CCc
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPV-------A-------------KT-GIVAQIGSG-SRP 94 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~-nvia~~~~~-~~~ 94 (276)
.+-+.+.|+|++-|.---.....+++.++.+++. |++++..+ + .+ -+..+|.+. ..+
T Consensus 176 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 255 (490)
T 3jru_B 176 AEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGDAR 255 (490)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTTSC
T ss_pred HHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCCCC
Confidence 4678899999999976566778889999988887 88876521 1 11 233334322 234
Q ss_pred eEEEeeccccCCCcCCCCCccccccCCe-e-ecC---Cc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 95 VVVLRADMDALPLQELVEWEHKSKIDGK-M-HAC---GH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~g~---G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
+|+|.|- +-.|++ +|. | -+. +| .+|.|+.+++++++.+.+ ++-+|+.+...-|-
T Consensus 256 ~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 256 PYVLVGK----------GITFDT--GGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp CEEEEEC----------EEEEEC--CTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred cEEEEcC----------eeEecC--CCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 5555442 112221 110 0 011 23 489999999999998875 67888888777765
No 62
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=85.05 E-value=17 Score=33.10 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=67.8
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc------CCceEEEEEcCC-CCceEEEeeccccCCCcCC
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV------AKTGIVAQIGSG-SRPVVVLRADMDALPLQEL 110 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~-~~~~i~l~~H~DtVp~~~~ 110 (276)
.+-+.+.|+|++.|.---.....+++.++.+++.|++++..+ +.+.+++.=.+. ..|.++-..+ . |..+.
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y--~-~~~~~ 243 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW--G-DIKAP 243 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE--S-CTTSC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe--C-CCCCC
Confidence 456788999999987555667888899999999999886521 111111111111 1233333322 1 11100
Q ss_pred ------CCCccccccCCe-e----ecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 111 ------VEWEHKSKIDGK-M----HACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 111 ------~~w~~~~~~~g~-l----~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
.+-.|+ .+|. | .=.+| .+|.|+.+++++++.+.+ ++.+|+.+...-|-
T Consensus 244 ~i~LVGKGITFD--sGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 244 KVTLVGKGVCFD--SGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQ--LPVRLRLLIPAVEN 305 (482)
T ss_dssp EEEEEECEEEEE--CCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred eEEEEccceEee--cCCccCcCccchhhccccchHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 011122 1110 0 01234 389999999999998875 67888888777766
No 63
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=84.53 E-value=25 Score=32.40 Aligned_cols=112 Identities=12% Similarity=0.081 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcC--CCeeecc-------CC--------------ceEEEEEcC-C-
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLG--IPYAYPV-------AK--------------TGIVAQIGS-G- 91 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~--------------~nvia~~~~-~- 91 (276)
..+-+.+.|+|++-|.---.....+++.++.++++| ++++..+ +. .-++-+|.+ +
T Consensus 180 ~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~ 259 (503)
T 1gyt_A 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNAS 259 (503)
T ss_dssp HHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCC
Confidence 356678999999999765566788899999999999 8876521 11 123334422 1
Q ss_pred -CCceEEEeeccccCCCcCCCCCccccccCCe-e-ecCC---c---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 92 -SRPVVVLRADMDALPLQELVEWEHKSKIDGK-M-HACG---H---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 92 -~~~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~g~G---~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
..++|+|.|- +-.|++ +|. | -+.| | .+|.|+.+++++++.+.+ ++-+|+.+...-|-
T Consensus 260 ~~~~~i~LVGK----------GITFDs--GGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~EN 325 (503)
T 1gyt_A 260 EDARPIVLVGK----------GLTFDS--GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCEN 325 (503)
T ss_dssp TTCCCEEEEEE----------EEEEEC--CTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCCcEEEEcC----------ceEecC--CCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 1244555432 112221 110 1 0222 3 489999999999998875 67888888877765
No 64
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=84.12 E-value=2.1 Score=41.29 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhhCCCCCC--cHHHHHHHHHHHHHhcCCC-eee
Q 023838 23 EILTNQVMISAQQDKDWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIP-YAY 77 (276)
Q Consensus 23 ~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~-~~~ 77 (276)
+.+.+.+.+.++. +++.+.++.|.++|-..| ++.+.++|+++.|+++|++ ++.
T Consensus 12 ~~l~~~~~~~~~~--~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 12 QSIRWKLVSEMKA--ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp -CHHHHHHHHCCH--HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCH--HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 4566777777766 689999999999998887 4678999999999999998 544
No 65
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=84.00 E-value=17 Score=33.53 Aligned_cols=111 Identities=10% Similarity=0.079 Sum_probs=70.5
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-------C-------------Cc-eEEEEEcC-C-CCc
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------A-------------KT-GIVAQIGS-G-SRP 94 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~-------------~~-nvia~~~~-~-~~~ 94 (276)
.+-+.+.|+|++-|.---.....+++.++.+++.|++++..+ + .+ -+..+|.+ + ..+
T Consensus 197 a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~~ 276 (515)
T 3kzw_A 197 GQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEA 276 (515)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSCC
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCCC
Confidence 466789999999997666677888999999999999886521 1 11 23333422 1 134
Q ss_pred eEEEeeccccCCCcCCCCCccccccCCe-e----ecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 95 VVVLRADMDALPLQELVEWEHKSKIDGK-M----HACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l----~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
+|+|.|- +-.|++ +|. | .=.+| .+|.|+.+++++++.+.+ ++-+|+.+...-|-
T Consensus 277 ~i~LVGK----------GiTFDs--GG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 277 PIALVGK----------GITYDS--GGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CEEEEEE----------EEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred cEEEecC----------ceEEec--CCcCCCCccChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 5555442 111221 110 0 01234 389999999999998875 67888888777765
No 66
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=83.92 E-value=20 Score=33.00 Aligned_cols=111 Identities=9% Similarity=-0.041 Sum_probs=70.3
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-------CC-------------c-eEEEEEcCC--CCc
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------AK-------------T-GIVAQIGSG--SRP 94 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~-nvia~~~~~--~~~ 94 (276)
.+-+.+.|+|++.|.---.....+++.++.++++|++++..+ +. + -+..+|.+. +.+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 356788999999997666677889999999999999886531 11 1 233344332 135
Q ss_pred eEEEeeccccCCCcCCCCCccccccCCe-ee-c---CCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 95 VVVLRADMDALPLQELVEWEHKSKIDGK-MH-A---CGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-g---~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
+|+|.|-= -.|+. +|. |- + .+| .+|.|+.+++++++.+.+ ++-+|..++..-|-
T Consensus 284 ~iaLVGKG----------ITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~--lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGKG----------IVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQ--QPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEEE----------EETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHT--CSEEEEEEEEEEEC
T ss_pred cEEEecCc----------eEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHcC--CCceEEEEEEEecc
Confidence 55555431 11211 110 00 1 123 388999999999998765 67888888877776
No 67
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=83.83 E-value=0.36 Score=43.84 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=40.0
Q ss_pred HhhhCCCCCCcHHHHHHHHHHHHHhcCCC---------------eeeccCCceEEEEEcCC----CCceEEEeeccccC
Q 023838 46 QIHENPELLFEEHNTSALIRRELDKLGIP---------------YAYPVAKTGIVAQIGSG----SRPVVVLRADMDAL 105 (276)
Q Consensus 46 ~l~~ips~s~~e~~~~~~l~~~l~~~G~~---------------~~~~~~~~nvia~~~~~----~~~~i~l~~H~DtV 105 (276)
+++++=.-|..+..+.+++.++|++.||. +..+....|+++...+. ..+.+++.+|+|.+
T Consensus 7 ~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 7 GLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp -CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 44444444556788888889999988881 22221226899986442 24789999999998
No 68
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=83.46 E-value=15 Score=33.60 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=69.3
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhc-CCCeeecc-------C-------------Cc-eEEEEEcC-C-CC
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKL-GIPYAYPV-------A-------------KT-GIVAQIGS-G-SR 93 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~-nvia~~~~-~-~~ 93 (276)
.+-+.+.|+|++-|.---.....+++.++.++++ |++++..+ + .+ -+..+|.+ + ..
T Consensus 164 a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 243 (486)
T 3pei_A 164 ACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEGD 243 (486)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTTS
T ss_pred HHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCCC
Confidence 4668899999999976566778899999999988 88876521 1 11 23333422 1 23
Q ss_pred ceEEEeeccccCCCcCCCCCccccccCCe-ee-c---CCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 94 PVVVLRADMDALPLQELVEWEHKSKIDGK-MH-A---CGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 94 ~~i~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-g---~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
++|+|.|- +-.|++ +|. |- + .+| .+|.|+.+++++++.+.+ ++-+|+.+...-|-
T Consensus 244 ~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 244 APIVLVGK----------GLVFDN--GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp CCEEEEEE----------EEETEE--CC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred CcEEEEcc----------ceEEec--CCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 45555442 112221 110 00 1 223 389999999999998875 67888888877776
No 69
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=82.94 E-value=2.2 Score=38.94 Aligned_cols=50 Identities=26% Similarity=0.255 Sum_probs=36.6
Q ss_pred cHHHHHHHHHHHHHhcCCCe--ee----------ccC-CceEEEEEcCCC--CceEEEeeccccC
Q 023838 56 EEHNTSALIRRELDKLGIPY--AY----------PVA-KTGIVAQIGSGS--RPVVVLRADMDAL 105 (276)
Q Consensus 56 ~e~~~~~~l~~~l~~~G~~~--~~----------~~~-~~nvia~~~~~~--~~~i~l~~H~DtV 105 (276)
.+..+.+++.+.|++.||.- +. .+. ..|+++...+.+ .+.+++.+|+|-+
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 36789999999999999953 11 011 258998765432 3789999999987
No 70
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=81.24 E-value=26 Score=32.28 Aligned_cols=119 Identities=13% Similarity=0.004 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCeeecc-------C-------------Cc-eEEEEEcCC--CCc
Q 023838 38 DWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPYAYPV-------A-------------KT-GIVAQIGSG--SRP 94 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~-------------~~-nvia~~~~~--~~~ 94 (276)
.+-+.+.|+|++.|.---.....++..++.++++|++++..+ + .+ -+..+|.+. ..+
T Consensus 205 a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~ 284 (528)
T 3kr4_A 205 YFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKK 284 (528)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCE
T ss_pred HHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCC
Confidence 456889999999997656667788888888888899886521 1 11 233344332 235
Q ss_pred eEEEeeccccCCCcCCCCCccccccCCeeecCCc---cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 023838 95 VVVLRADMDALPLQELVEWEHKSKIDGKMHACGH---DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEE 162 (276)
Q Consensus 95 ~i~l~~H~DtVp~~~~~~w~~~~~~~g~l~g~G~---kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE 162 (276)
+|+|.|-==|.- ..+.+.+|-.+..+ .+| .+|.|+.+++++++.+.+ ..+-+|..+...-|-
T Consensus 285 ~iaLVGKGITFD---sGG~slKp~~g~~M--~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 285 KIALVGKGITFD---SGGYNLKAAPGSMI--DLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp EEEEEEEEEEEE---CCTTSCSCSTTCCG--GGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred cEEEecCceEee---cCCcccCCCCCcCH--HHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 666655311110 01111111100011 123 388999999999988765 225678777776665
No 71
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=68.73 E-value=4 Score=36.61 Aligned_cols=40 Identities=13% Similarity=0.198 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhhCCCCCC--cHHHHHHHHHHHHHhcCCCeee
Q 023838 38 DWLVSVRRQIHENPELLF--EEHNTSALIRRELDKLGIPYAY 77 (276)
Q Consensus 38 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~ 77 (276)
+++.+.++.|.+.|..+| .+.++++|+.+.|+++|+++..
T Consensus 16 ~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~ 57 (421)
T 2ek8_A 16 ENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEV 57 (421)
T ss_dssp HHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEE
Confidence 677888888888777666 4688999999999999997643
No 72
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=65.81 E-value=7.2 Score=35.26 Aligned_cols=56 Identities=16% Similarity=0.187 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHHHHHhh-hC-CCC--CCcHHHHHHHHHHHHHhcCC-Ceee
Q 023838 21 VDEILTNQVMISAQQDKDWLVSVRRQIH-EN-PEL--LFEEHNTSALIRRELDKLGI-PYAY 77 (276)
Q Consensus 21 ~~~~~~~~i~~~i~~~~~~~~~~~~~l~-~i-ps~--s~~e~~~~~~l~~~l~~~G~-~~~~ 77 (276)
+++...++|.+..-. .+++.+.+++|. .+ |.. |..+.++++|+.+.|+++|+ ++..
T Consensus 5 ~~~~~~~~i~~~~~~-~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~ 65 (444)
T 3iib_A 5 INQKVAEQLAQKAQS-SSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYK 65 (444)
T ss_dssp HHHHHHHHHHHHHHH-CCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred chHHHHHHHHHHHhc-ccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEe
Confidence 344444444432221 256788888887 34 333 44688999999999999999 4543
No 73
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=60.60 E-value=1.3 Score=40.53 Aligned_cols=47 Identities=11% Similarity=0.106 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhcCCCe--ee--c------------cCCce-EEEEEcCCC---CceEEEeeccccC
Q 023838 59 NTSALIRRELDKLGIPY--AY--P------------VAKTG-IVAQIGSGS---RPVVVLRADMDAL 105 (276)
Q Consensus 59 ~~~~~l~~~l~~~G~~~--~~--~------------~~~~n-via~~~~~~---~~~i~l~~H~DtV 105 (276)
.+.+++.++|++.||+- +. . +...| +++...+.. .+.+++.+|+|.+
T Consensus 39 hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 39 ECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp STHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 67888999999999871 00 0 01234 777654431 2459999999998
No 74
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=49.69 E-value=19 Score=34.29 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhhC---CCCCC--cHHHHHHHHHHHHHhcCCCe
Q 023838 23 EILTNQVMISAQQDKDWLVSVRRQIHEN---PELLF--EEHNTSALIRRELDKLGIPY 75 (276)
Q Consensus 23 ~~~~~~i~~~i~~~~~~~~~~~~~l~~i---ps~s~--~e~~~~~~l~~~l~~~G~~~ 75 (276)
..+++++.+.++. +++.+.++.|.+. |-.+| .+.++++||.+.|+++|++.
T Consensus 5 ~~l~~~l~~~i~~--~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 5 DDLKRKLSEKLDS--TDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHHHHT--CCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHhCCH--HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 4566777777776 5788888988873 54444 56889999999999999974
No 75
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=42.42 E-value=8.8 Score=34.63 Aligned_cols=45 Identities=11% Similarity=-0.080 Sum_probs=29.7
Q ss_pred CeeecCCc--cHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc-ccHHHH
Q 023838 121 GKMHACGH--DVHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG-AGAFHM 170 (276)
Q Consensus 121 g~l~g~G~--kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g-~g~~~~ 170 (276)
+.+.+++. +.++.+++.+++.++ ..+.++.++| ..||.| .|+.-+
T Consensus 227 ~~I~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA 274 (428)
T 2ijz_A 227 EFIAGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGA 274 (428)
T ss_dssp SSSSCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHH
T ss_pred CeEEeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhh
Confidence 44544443 466777777776553 3567888888 999998 455443
No 76
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=41.58 E-value=7.7 Score=35.38 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=25.6
Q ss_pred CeeecCCcc--HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc
Q 023838 121 GKMHACGHD--VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (276)
Q Consensus 121 g~l~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 164 (276)
+.+.+++.+ .++.+++.+++.++ ..++.++.++|+..||.|
T Consensus 247 ~~I~s~~lDdr~~~~~~l~al~~~~---~~~~~~~~~~~~d~EEVG 289 (458)
T 1y7e_A 247 ALIGAYGQDDKICVFTSLESIFDLE---ETPNKTAICFLVDKEEIG 289 (458)
T ss_dssp CEEEESSHHHHHHHHHHHHHHSSSS---CCCSSCEECCCBCSTTC-
T ss_pred CeEEEecCccHHHHHHHHHHHHhhh---ccCCceEEEEEEcccccC
Confidence 455555443 45555555544332 146789999999999988
No 77
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=41.34 E-value=15 Score=33.44 Aligned_cols=39 Identities=23% Similarity=0.233 Sum_probs=24.6
Q ss_pred eeecCCcc--HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc
Q 023838 122 KMHACGHD--VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (276)
Q Consensus 122 ~l~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 164 (276)
.+.+++.+ .++.+++.+++ +.. .++.++.++++..||.|
T Consensus 254 ~I~s~~lDdr~~~~~~l~al~---~~~-~~~~~~~~~~~d~EEVG 294 (461)
T 2glj_A 254 MVMGYGQDDRICAYTSFEAML---EMK-NAKKTCITILVDKEEVG 294 (461)
T ss_dssp EEEETTHHHHHHHHHHHHHHH---TCC-SCSSCEEEEEECCGGGT
T ss_pred EEEEecchhHHHHHHHHHHHH---hhc-cCCCeEEEEEEccCCCC
Confidence 34444432 44455555444 332 46789999999999987
No 78
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=34.30 E-value=29 Score=31.49 Aligned_cols=38 Identities=24% Similarity=0.306 Sum_probs=23.5
Q ss_pred eeecCCcc--HHHHHHHHHHHHHHhccCCCCceEEEEEecCCCcc
Q 023838 122 KMHACGHD--VHTTMLLGAAKLIHQRKDKLKGTVRILFQPAEEGG 164 (276)
Q Consensus 122 ~l~g~G~k--g~~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 164 (276)
.+.|.+.+ .++.+++.++ .+. ..+..+.++++..||.|
T Consensus 242 ~i~~~~lDnr~~~~~~l~al---~~~--~~~~~~~~~~~d~EEVG 281 (450)
T 2glf_A 242 LIGAYGQDDRICAYTALRAL---LSA--NPEKSIGVIFFDKEEIG 281 (450)
T ss_dssp EEEETTHHHHHHHHHHHHHH---HHC--CCSSCEEEEEESCGGGT
T ss_pred EEEEecchhhHHHHHHHHHH---Hhc--CCCceEEEEEEcccccC
Confidence 34444433 3444444444 333 35789999999999987
No 79
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=22.59 E-value=77 Score=24.81 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCCe
Q 023838 37 KDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIPY 75 (276)
Q Consensus 37 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~ 75 (276)
+++.++.+++|++-..++-+ +-|.+.|++.||++
T Consensus 31 ~~~r~~~I~eiI~~~~I~TQ-----eEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 31 QDNLVRAFKALLKEERFGSQ-----GEIVEALKQEGFEN 64 (180)
T ss_dssp HHHHHHHHHHHHHHTCCCSH-----HHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHhhCCcCCH-----HHHHHHHHHCCCcc
Confidence 46677777778776666554 44777788888876
No 80
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=22.31 E-value=2.9e+02 Score=21.82 Aligned_cols=35 Identities=9% Similarity=-0.007 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHhhhCCCCCCcH
Q 023838 23 EILTNQVMISAQQDKDWLVSVRRQIHENPELLFEE 57 (276)
Q Consensus 23 ~~~~~~i~~~i~~~~~~~~~~~~~l~~ips~s~~e 57 (276)
...-.++.-.-++.+.+.++.|+.+++.+..+.++
T Consensus 82 ~~yFae~RL~REq~Rsk~~E~L~eII~n~n~S~ee 116 (197)
T 3tuf_A 82 DDLFTTYRLDLEDARSKEREELNAIVSSDDATAKE 116 (197)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 33444555556667788999999999999877654
No 81
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=21.91 E-value=1.6e+02 Score=20.07 Aligned_cols=39 Identities=3% Similarity=-0.055 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhhhCCCCCCcHHHHHHHHHHHHHhcCCC
Q 023838 36 DKDWLVSVRRQIHENPELLFEEHNTSALIRRELDKLGIP 74 (276)
Q Consensus 36 ~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~ 74 (276)
..++++++|.++++-.+++.+-+++++-..+.|.+-+..
T Consensus 11 ~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~ 49 (89)
T 2qsb_A 11 LFNEVMYLLDELSQDITVPKNVRKVAQDSKAKLSQENES 49 (89)
T ss_dssp HHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHTCTTSC
T ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHhCCCcc
Confidence 345677789999999999999888998888888765543
No 82
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=20.25 E-value=2.4e+02 Score=25.79 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=32.1
Q ss_pred CcHHHHHHHHHHHHHhcCCCee--ec-----cC--------CceEEEE-EcCC--C-CceEEEeeccccC
Q 023838 55 FEEHNTSALIRRELDKLGIPYA--YP-----VA--------KTGIVAQ-IGSG--S-RPVVVLRADMDAL 105 (276)
Q Consensus 55 ~~e~~~~~~l~~~l~~~G~~~~--~~-----~~--------~~nvia~-~~~~--~-~~~i~l~~H~DtV 105 (276)
.-+..+.+++.++|++.||.-- .. ++ ...++|- +++. + ..--++.+|.|.-
T Consensus 50 pT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivgaHtDSP 119 (496)
T 3vat_A 50 PSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIGAHTDSP 119 (496)
T ss_dssp SSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEEEeccCC
Confidence 3467899999999999999531 10 11 1245554 3432 1 2445788999975
Done!