Query 023840
Match_columns 276
No_of_seqs 185 out of 1143
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 13:39:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ty2_A 5'-nucleotidase SURE; s 100.0 9.2E-72 3.1E-76 509.9 18.5 220 11-245 8-228 (261)
2 2phj_A 5'-nucleotidase SURE; S 100.0 2.6E-71 8.8E-76 505.0 21.0 217 15-245 2-220 (251)
3 1j9j_A Stationary phase surviV 100.0 3.8E-71 1.3E-75 503.2 20.1 215 15-243 1-216 (247)
4 2wqk_A 5'-nucleotidase SURE; S 100.0 1.7E-70 6E-75 499.8 22.1 217 15-244 2-219 (251)
5 2v4n_A Multifunctional protein 100.0 2.6E-70 8.9E-75 499.4 19.8 212 15-243 2-215 (254)
6 2e6c_A 5'-nucleotidase SURE; S 100.0 1.2E-69 4.1E-74 492.6 20.1 210 15-243 1-214 (244)
7 1l5x_A SurviVal protein E; str 100.0 3E-69 1E-73 498.4 18.0 217 15-243 1-223 (280)
8 3oti_A CALG3; calicheamicin, T 94.8 0.015 5E-07 53.3 3.2 38 12-50 18-56 (398)
9 4fzr_A SSFS6; structural genom 94.0 0.1 3.4E-06 47.5 6.9 41 11-52 12-53 (398)
10 3tsa_A SPNG, NDP-rhamnosyltran 92.9 0.28 9.4E-06 44.3 7.9 37 14-51 1-38 (391)
11 4amg_A Snogd; transferase, pol 92.9 0.69 2.3E-05 41.6 10.5 38 12-53 20-61 (400)
12 3otg_A CALG1; calicheamicin, T 92.7 0.19 6.6E-06 45.5 6.6 39 12-51 18-57 (412)
13 2iyf_A OLED, oleandomycin glyc 92.1 0.43 1.5E-05 43.7 8.1 37 13-53 6-46 (430)
14 3ia7_A CALG4; glycosysltransfe 91.5 0.38 1.3E-05 43.1 6.9 36 15-51 5-41 (402)
15 2iya_A OLEI, oleandomycin glyc 91.1 0.75 2.6E-05 42.1 8.6 38 13-54 11-52 (424)
16 3rsc_A CALG2; TDP, enediyne, s 90.4 0.43 1.5E-05 43.4 6.2 40 12-52 18-58 (415)
17 3fro_A GLGA glycogen synthase; 84.2 1.8 6E-05 38.8 6.3 42 13-55 1-48 (439)
18 2r60_A Glycosyl transferase, g 77.6 3 0.0001 38.9 5.6 41 12-53 5-61 (499)
19 2gek_A Phosphatidylinositol ma 73.7 4 0.00014 36.2 5.2 46 9-55 15-65 (406)
20 2iuy_A Avigt4, glycosyltransfe 70.4 2.6 9E-05 36.9 3.1 40 14-54 3-59 (342)
21 3c48_A Predicted glycosyltrans 68.5 7.6 0.00026 35.0 5.8 41 12-53 18-70 (438)
22 3s2u_A UDP-N-acetylglucosamine 65.9 7.7 0.00026 35.2 5.3 32 14-49 2-37 (365)
23 3n7t_A Macrophage binding prot 65.8 4.9 0.00017 35.4 3.9 41 13-54 10-60 (247)
24 1wd5_A Hypothetical protein TT 64.1 8.3 0.00029 32.5 4.9 41 13-54 119-160 (208)
25 3kkl_A Probable chaperone prot 58.8 5 0.00017 35.2 2.6 40 14-54 5-54 (244)
26 2iw1_A Lipopolysaccharide core 57.9 7.3 0.00025 34.0 3.5 37 15-52 1-41 (374)
27 1rzu_A Glycogen synthase 1; gl 56.7 5.7 0.0002 36.6 2.7 37 15-52 1-44 (485)
28 2yjn_A ERYCIII, glycosyltransf 55.1 9.7 0.00033 35.0 4.0 37 12-52 18-58 (441)
29 2qzs_A Glycogen synthase; glyc 54.8 6.6 0.00022 36.2 2.8 37 15-52 1-44 (485)
30 4e08_A DJ-1 beta; flavodoxin-l 51.5 18 0.00061 29.6 4.7 36 16-52 7-42 (190)
31 3cwc_A Putative glycerate kina 50.9 40 0.0014 32.0 7.5 42 102-145 287-328 (383)
32 3h4t_A Glycosyltransferase GTF 50.4 5.3 0.00018 36.5 1.4 37 15-52 1-38 (404)
33 2x6q_A Trehalose-synthase TRET 50.0 25 0.00085 31.4 5.8 40 12-53 38-81 (416)
34 4b4o_A Epimerase family protei 47.7 19 0.00066 30.9 4.6 29 15-49 1-31 (298)
35 1rrv_A Glycosyltransferase GTF 46.2 13 0.00044 33.8 3.3 35 15-53 1-39 (416)
36 1iir_A Glycosyltransferase GTF 45.5 19 0.00064 32.7 4.3 35 15-53 1-39 (415)
37 1f0k_A MURG, UDP-N-acetylgluco 43.0 19 0.00065 31.4 3.8 34 15-52 7-44 (364)
38 3u27_C Microcompartments prote 42.8 9.4 0.00032 33.7 1.7 106 27-137 48-207 (220)
39 1oi4_A Hypothetical protein YH 41.3 47 0.0016 27.3 5.8 40 14-54 23-62 (193)
40 3dqp_A Oxidoreductase YLBE; al 41.2 1.4E+02 0.0047 24.0 10.7 104 15-144 1-106 (219)
41 3grc_A Sensor protein, kinase; 40.5 19 0.00065 26.7 2.9 30 9-41 1-30 (140)
42 1u9c_A APC35852; structural ge 40.3 53 0.0018 27.3 6.1 39 15-54 8-54 (224)
43 4g41_A MTA/SAH nucleosidase; m 40.2 1.1E+02 0.0036 25.7 8.0 48 125-172 180-232 (236)
44 3l18_A Intracellular protease 39.7 22 0.00077 28.2 3.4 38 14-52 2-39 (168)
45 2cve_A Hypothetical protein TT 39.0 21 0.00072 30.7 3.3 30 19-49 59-90 (191)
46 1vi7_A Hypothetical protein YI 38.6 24 0.00083 30.9 3.7 30 19-49 71-102 (217)
47 2p6p_A Glycosyl transferase; X 38.2 16 0.00053 32.5 2.4 37 15-52 1-38 (384)
48 3lte_A Response regulator; str 37.6 21 0.00071 26.1 2.7 30 9-41 1-30 (132)
49 3ot1_A 4-methyl-5(B-hydroxyeth 37.6 32 0.0011 28.8 4.2 37 15-52 10-46 (208)
50 3ono_A Ribose/galactose isomer 37.3 22 0.00074 31.2 3.1 36 13-49 2-40 (214)
51 2vrn_A Protease I, DR1199; cys 36.9 31 0.001 28.0 3.9 40 13-53 8-47 (190)
52 2iuf_A Catalase; oxidoreductas 36.0 12 0.00042 38.1 1.6 37 15-52 532-568 (688)
53 3gfh_A Ethanolamine utilizatio 35.3 4.9 0.00017 35.6 -1.3 51 82-134 151-202 (225)
54 4gi5_A Quinone reductase; prot 34.7 19 0.00064 32.4 2.4 43 5-48 10-59 (280)
55 3to5_A CHEY homolog; alpha(5)b 34.5 31 0.0011 27.1 3.5 39 101-145 56-96 (134)
56 2lpm_A Two-component response 34.5 26 0.00087 27.3 2.9 83 12-145 6-88 (123)
57 2geb_A Hypoxanthine-guanine ph 34.3 20 0.0007 29.5 2.4 43 13-56 97-140 (185)
58 2x0d_A WSAF; GT4 family, trans 34.3 23 0.0008 32.7 3.1 41 11-52 43-89 (413)
59 3gpi_A NAD-dependent epimerase 32.9 60 0.0021 27.5 5.3 32 14-52 3-36 (286)
60 1z7g_A HGPRT, HGPRTASE, hypoxa 32.9 32 0.0011 29.3 3.5 42 13-55 125-167 (217)
61 1tc1_A Protein (hypoxanthine p 32.2 27 0.00092 30.0 2.9 43 13-56 102-145 (220)
62 2jbh_A Phosphoribosyltransfera 32.0 30 0.001 29.6 3.2 42 13-55 133-175 (225)
63 1hgx_A HGXPRTASE, hypoxanthine 31.9 31 0.0011 28.2 3.2 42 13-55 94-136 (183)
64 1pzm_A HGPRT, hypoxanthine-gua 31.8 31 0.0011 29.3 3.2 43 13-56 117-160 (211)
65 3dp9_A MTA/SAH nucleosidase; v 31.6 45 0.0015 28.0 4.2 48 125-172 176-228 (231)
66 1yfz_A Hypoxanthine-guanine ph 31.4 24 0.00082 29.6 2.4 43 13-56 117-160 (205)
67 2hy7_A Glucuronosyltransferase 31.0 41 0.0014 30.7 4.1 38 9-48 9-49 (406)
68 3eei_A 5-methylthioadenosine n 30.3 64 0.0022 27.1 5.0 48 125-172 179-231 (233)
69 1to6_A Glycerate kinase; glyce 29.8 90 0.0031 29.4 6.3 42 101-145 277-318 (371)
70 3o4v_A MTA/SAH nucleosidase; m 29.5 91 0.0031 26.1 5.8 51 125-175 177-232 (234)
71 3okp_A GDP-mannose-dependent a 29.3 13 0.00044 32.6 0.3 40 12-54 2-46 (394)
72 2vyo_A ECU11_0510, chitooligos 28.8 35 0.0012 29.6 3.1 34 13-47 24-57 (254)
73 3kto_A Response regulator rece 28.7 38 0.0013 25.0 2.9 30 9-41 1-30 (136)
74 3eod_A Protein HNR; response r 28.5 44 0.0015 24.2 3.2 40 100-145 49-88 (130)
75 3bsf_A AT4G34840, nucleosidase 28.0 1.8E+02 0.006 24.9 7.5 53 125-177 190-249 (254)
76 1fsg_A HGPRTASE, hypoxanthine- 28.0 39 0.0013 29.2 3.2 43 13-56 141-184 (233)
77 2r85_A PURP protein PF1517; AT 27.9 59 0.002 28.2 4.4 34 14-53 2-35 (334)
78 3uk7_A Class I glutamine amido 27.9 23 0.00079 32.5 1.8 62 1-67 3-82 (396)
79 1rw7_A YDR533CP; alpha-beta sa 27.6 34 0.0012 29.3 2.7 30 23-53 24-53 (243)
80 2vch_A Hydroquinone glucosyltr 27.0 56 0.0019 30.9 4.4 41 9-53 1-46 (480)
81 1vdm_A Purine phosphoribosyltr 26.7 36 0.0012 26.7 2.6 32 13-45 82-114 (153)
82 3l3b_A ES1 family protein; ssg 26.2 61 0.0021 28.2 4.2 31 23-54 37-67 (242)
83 3ius_A Uncharacterized conserv 26.2 71 0.0024 26.9 4.5 29 15-50 6-36 (286)
84 3cg4_A Response regulator rece 25.8 61 0.0021 23.7 3.6 40 101-145 50-90 (142)
85 3gt7_A Sensor protein; structu 25.3 55 0.0019 24.8 3.4 41 100-145 49-90 (154)
86 2fex_A Conserved hypothetical 25.3 1.4E+02 0.0047 24.1 6.0 37 16-53 3-40 (188)
87 1vb5_A Translation initiation 25.1 77 0.0026 28.2 4.7 44 102-145 177-220 (276)
88 2lw6_A Avrpiz-T protein; plant 24.9 11 0.00036 27.3 -0.9 34 81-127 44-79 (80)
89 2pd4_A Enoyl-[acyl-carrier-pro 24.7 1.1E+02 0.0038 25.9 5.6 35 13-51 5-41 (275)
90 1dku_A Protein (phosphoribosyl 24.7 60 0.0021 29.5 4.0 36 13-49 216-252 (317)
91 1a3c_A PYRR, pyrimidine operon 24.7 47 0.0016 26.9 3.0 39 13-52 97-137 (181)
92 3hdv_A Response regulator; PSI 24.7 62 0.0021 23.6 3.4 27 12-41 5-31 (136)
93 1vch_A Phosphoribosyltransfera 24.4 47 0.0016 26.7 2.9 34 13-47 119-153 (175)
94 2rjn_A Response regulator rece 24.1 70 0.0024 24.0 3.7 39 101-145 50-88 (154)
95 1w2w_B 5-methylthioribose-1-ph 24.0 54 0.0019 27.8 3.3 42 103-144 52-93 (191)
96 3vue_A GBSS-I, granule-bound s 24.0 53 0.0018 31.6 3.6 40 13-53 8-54 (536)
97 4hcj_A THIJ/PFPI domain protei 23.7 29 0.001 28.7 1.5 36 17-53 11-46 (177)
98 2xd7_A Core histone macro-H2A. 23.1 1.8E+02 0.0063 24.2 6.5 67 104-172 95-163 (193)
99 1ny1_A Probable polysaccharide 22.9 58 0.002 27.9 3.3 31 12-42 40-70 (240)
100 3ej6_A Catalase-3; heme, hydro 22.8 71 0.0024 32.6 4.4 38 15-53 538-576 (688)
101 4fay_A Microcompartments prote 22.6 33 0.0011 30.9 1.7 52 82-133 177-231 (258)
102 1y0b_A Xanthine phosphoribosyl 22.5 56 0.0019 26.9 3.1 39 13-52 119-158 (197)
103 3ecs_A Translation initiation 22.3 73 0.0025 29.2 4.0 43 102-144 189-231 (315)
104 2ab0_A YAJL; DJ-1/THIJ superfa 22.3 84 0.0029 25.9 4.2 37 16-53 4-40 (205)
105 2zay_A Response regulator rece 22.3 63 0.0021 23.9 3.1 27 12-41 6-32 (147)
106 2cc0_A Acetyl-xylan esterase; 22.1 57 0.0019 26.8 3.0 28 14-42 4-31 (195)
107 3efe_A THIJ/PFPI family protei 22.1 2E+02 0.007 23.7 6.6 37 16-53 7-51 (212)
108 2h7i_A Enoyl-[acyl-carrier-pro 22.1 1.3E+02 0.0045 25.4 5.5 35 12-50 5-41 (269)
109 1vhq_A Enhancing lycopene bios 21.7 82 0.0028 26.6 4.0 31 23-54 20-50 (232)
110 1zn8_A APRT, adenine phosphori 21.6 58 0.002 26.4 2.9 41 13-54 119-160 (180)
111 1dhr_A Dihydropteridine reduct 21.5 1.2E+02 0.0041 25.1 5.0 36 12-52 5-41 (241)
112 2p91_A Enoyl-[acyl-carrier-pro 21.5 1.3E+02 0.0044 25.6 5.4 34 13-50 20-55 (285)
113 1ao0_A Glutamine phosphoribosy 21.2 91 0.0031 29.5 4.6 36 13-49 337-373 (459)
114 3s28_A Sucrose synthase 1; gly 20.5 5.2E+02 0.018 26.5 10.4 32 100-142 405-436 (816)
115 1qsg_A Enoyl-[acyl-carrier-pro 20.2 1.5E+02 0.0051 24.9 5.4 34 13-50 8-43 (265)
116 2wzn_A TET3, 354AA long hypoth 20.0 1.4E+02 0.0047 24.8 5.1 51 123-175 295-348 (354)
No 1
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=100.00 E-value=9.2e-72 Score=509.90 Aligned_cols=220 Identities=31% Similarity=0.469 Sum_probs=194.7
Q ss_pred CCCCCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHH
Q 023840 11 SDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCA 90 (276)
Q Consensus 11 ~~~~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV 90 (276)
..++|||||||||||+||||++|+++|++ + |+|+||||++||||+||++|+++||++++++ ...|+|+|||+|||
T Consensus 8 ~~~~m~ILlTNDDGi~apGi~aL~~~l~~-~-~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~---~~~~~v~GTPaDCV 82 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGVYAKGLAILAKTLAD-L-GEVDVVAPDRNRSGASNSLTLNAPLHIKNLE---NGMISVEGTPTDCV 82 (261)
T ss_dssp ---CCEEEEECSSCTTCHHHHHHHHHHTT-T-SEEEEEEESSCCTTCTTCCCCSSCEEEEECT---TSCEEESSCHHHHH
T ss_pred cCCCCeEEEEcCCCCCCHHHHHHHHHHHh-c-CCEEEEecCCCCcCcccceecCCCeEEEEec---CCeEEECCCHHHHH
Confidence 45679999999999999999999999998 3 6999999999999999999999999999875 23599999999999
Q ss_pred HHhhhcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHH
Q 023840 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAI 170 (276)
Q Consensus 91 ~~al~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l 170 (276)
++||++ +++.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.++++++
T Consensus 83 ~lal~~-l~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l 157 (261)
T 3ty2_A 83 HLAITG-VLPEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLGGE----LFRYYETAAKVVYQLIQRI 157 (261)
T ss_dssp HHHTTT-TSSSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEECSS----SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHH-hcCCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHH
Confidence 999997 56778999999999999999999999999999999999999999999742 3458999999999998887
Q ss_pred HHHHHhCCCCCCcEEEecCCCCC-CCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCCCC
Q 023840 171 LAEIRNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTST 245 (276)
Q Consensus 171 ~~~~~~~~~p~~~~LNVN~P~~~-~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~~~ 245 (276)
+ +..+|++++||||||..+ .+.+|+|+||||++.|.+.++++ .+|+|++|||.+..+.+.+..++||++-
T Consensus 158 ~----~~~lp~~~~lNVN~P~~~~~~~kGi~vtr~g~r~~~~~~~~~-~dprG~~yyW~~g~~~~~~~~~gTD~~a 228 (261)
T 3ty2_A 158 E----KDPLPPSTILNINVPDLPYEELKGFEVTRLGTRHRAEPTIRQ-IDPRGHPIYWVGAAGPEQDSGPGTDFFA 228 (261)
T ss_dssp H----HSCCCTTCEEEEEECSSCGGGCCEEEECBCCCBCSCCCCEEE-ECTTSCEEEECCCCCCBSSCSTTBHHHH
T ss_pred H----hcCCCCCeEEEecCCCCCcccCCceEEEECcccccccceEEE-ECCCCCeEEEEcCCcccccCCCCChHHH
Confidence 6 346899999999999976 56899999999999999999887 6999999999987766667777887643
No 2
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=100.00 E-value=2.6e-71 Score=505.00 Aligned_cols=217 Identities=34% Similarity=0.516 Sum_probs=194.1
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHHHhh
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (276)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++. +.. |+|+|||+|||++||
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~-~~~-~~v~GTPaDCV~lal 77 (251)
T 2phj_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT-DFY-TVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET-TEE-EETTCCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHhcC--CEEEEecCCCccCCccceecCCCeEEEEecC-CCe-EEECCCHHHHHHHHH
Confidence 899999999999999999999999977 9999999999999999999999999999863 222 999999999999999
Q ss_pred hcccCC-CCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 023840 95 SQALFP-SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (276)
Q Consensus 95 ~~~l~~-~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (276)
++ +++ ++|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.++++++++
T Consensus 78 ~~-l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~~- 151 (251)
T 2phj_A 78 RV-ILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN- 151 (251)
T ss_dssp HT-TTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH-
T ss_pred HH-hcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcCCC----CccCHHHHHHHHHHHHHHHHh-
Confidence 97 555 68999999999999999999999999999999999999999999742 234799999999999988874
Q ss_pred HHhCCCCCCcEEEecCCCCC-CCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCCCC
Q 023840 174 IRNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTST 245 (276)
Q Consensus 174 ~~~~~~p~~~~LNVN~P~~~-~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~~~ 245 (276)
..+|++++||||||..+ .+.||+|+||||++.|.+.++++ .+|+|++|||.+....+.+..++||++-
T Consensus 152 ---~~lp~~~~lNVN~P~~~~~~~kgi~~tr~g~~~~~~~~~~~-~dp~G~~yyWl~g~~~~~~~~~gTD~~a 220 (251)
T 2phj_A 152 ---EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKRAYKERVFKY-IDPYGKPFYWIAAEEFGWHAEEGTDYWA 220 (251)
T ss_dssp ---HCCCTTEEEEEEEESSCGGGCCEEEECBCCCCSSEEEEEEE-ECTTSCEEEEEEEESTTTTCCTTBHHHH
T ss_pred ---cCCCCCEEEEecCCCCCccccCCEEEEECcccccccceEEE-ECCCCCEEEEeCCCcccCcCCCCCHHHH
Confidence 45899999999999976 57899999999999999999887 5999999999976665656667777643
No 3
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=100.00 E-value=3.8e-71 Score=503.20 Aligned_cols=215 Identities=32% Similarity=0.443 Sum_probs=189.0
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCC-CCeeEEecCChHHHHHHh
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD-GVTAYAVSGTPADCASLG 93 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~-g~~~~~v~GTPaDcV~~a 93 (276)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||++|
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGIQSKGIIVLAELLSEEH--EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 699999999999999999999999876 99999999999999999999999999998643 335799999999999999
Q ss_pred hhcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 023840 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (276)
Q Consensus 94 l~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (276)
|++ +++.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... ...+|+.|++++.+++++++
T Consensus 79 l~~-l~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~----~~~~~~~aa~~~~~lv~~l~-- 151 (247)
T 1j9j_A 79 YNV-VMDKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSANY----ESPDFEGAARFLIDFLKEFD-- 151 (247)
T ss_dssp HHT-TSTTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEESCS----SSCCHHHHHHHHHHHHHHCC--
T ss_pred HHh-hccCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecCCC----CCCCHHHHHHHHHHHHHHHH--
Confidence 997 56779999999999999999999999999999999999999999999642 23489999999999888765
Q ss_pred HHhCCCCCCcEEEecCCCCCCCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCC
Q 023840 174 IRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDT 243 (276)
Q Consensus 174 ~~~~~~p~~~~LNVN~P~~~~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~ 243 (276)
+..+|++++|||||| ..+.+|+|+||||++.|.+.+.++ .+|+|++|||.+....+.+..++||+
T Consensus 152 --~~~lp~~~~lNVN~P--~~~~~g~~~tr~~~~~~~~~~~~~-~dp~g~~~yw~~g~~~~~~~~~~tD~ 216 (247)
T 1j9j_A 152 --FSLLDPFTMLNINVP--AGEIKGWRFTRQSRRRWNDYFEER-VSPFGEKYYWMMGEVIEDDDRDDVDY 216 (247)
T ss_dssp --GGGSCTTCEEEEEEC--SSCCCEEEECBCCCCEEEEEEEEE-ECTTSCEEEEEEEEEECCCCCSSBHH
T ss_pred --HcCCCcccEEEecCC--ccccCceEEEECCCcccccceEEE-ECCCCCeEEEeCCcccCCCCCCCCHH
Confidence 446899999999999 556899999999999998887776 69999999999743333334566665
No 4
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=100.00 E-value=1.7e-70 Score=499.76 Aligned_cols=217 Identities=35% Similarity=0.498 Sum_probs=194.8
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHHHhh
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (276)
|+|||||||||+||||++|+++|++.| +|+||||++||||+|||+|+++|+++++++. ...|+|+|||||||++||
T Consensus 2 p~ILlTNDDGi~apGi~~L~~~l~~~g--~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~--~~~~~v~GTPaDCV~lal 77 (251)
T 2wqk_A 2 PTFLLVNDDGYFSPGINALREALKSLG--RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDT--DFYTVIDGTPADCVHLGY 77 (251)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTSCCSCCCSSCEEEEEEET--TEEEETTCCHHHHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHhCC--CEEEEeeCCCCcccccCcCCCCCceeEEeec--cceeecCCChHHHHhhhh
Confidence 799999999999999999999999987 8999999999999999999999999998752 346889999999999999
Q ss_pred hcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 023840 95 SQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAEI 174 (276)
Q Consensus 95 ~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~~ 174 (276)
++++.+.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... +..+|+.|++++.++++++++
T Consensus 78 ~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~~~----~~~~~~~a~~~~~~ii~~ll~-- 151 (251)
T 2wqk_A 78 RVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAFGR----ENIMFEEIAKVCVDIVKKVLN-- 151 (251)
T ss_dssp HTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEECS----SSCCHHHHHHHHHHHHHHHHH--
T ss_pred hhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcccC----CCcchHHHHHHHHHHHHHHHH--
Confidence 97555568999999999999999999999999999999999999999999742 346899999999999888774
Q ss_pred HhCCCCCCcEEEecCCCCC-CCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCCC
Q 023840 175 RNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDTS 244 (276)
Q Consensus 175 ~~~~~p~~~~LNVN~P~~~-~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~~ 244 (276)
..+|++++||||||..+ .+.+|+|+||||++.|.+.++++ .+|+|++|||.+....+.+..++||++
T Consensus 152 --~~~~~~~~lNVN~P~~~~~~~~g~~~t~~g~~~~~~~~~~~-~dp~g~~~yw~~~~~~~~~~~~gtD~~ 219 (251)
T 2wqk_A 152 --EGIPEDTYLNVNIPNLRYEEIKGIKVTRQGKRAYKERVFKY-IDPYGKPFYWIAAEEFGWHAEEGTDYW 219 (251)
T ss_dssp --HCCCTTEEEEEEEESSCGGGCCEEEECBCCCCSSEEEEEEE-ECTTSCEEEEEEEESTTTTCCTTBHHH
T ss_pred --hCCccccccccccCCCCccccCceEeeeccccccccceeee-eCCCCCeEEEeccCccCCCCCCCCHHH
Confidence 46899999999999976 67899999999999999988887 599999999998766666666777754
No 5
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=100.00 E-value=2.6e-70 Score=499.42 Aligned_cols=212 Identities=32% Similarity=0.473 Sum_probs=190.4
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEec-CChHHHHHHh
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVS-GTPADCASLG 93 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~-GTPaDcV~~a 93 (276)
|||||||||||+||||++|+++|++.| +|+||||++||||+|||+|+++||++++++ ...|+|+ |||+|||++|
T Consensus 2 M~ILlTNDDGi~apGi~aL~~~L~~~g--~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~---~~~~~v~~GTPaDCV~la 76 (254)
T 2v4n_A 2 MRILLSNDDGVHAPGIQTLAKALREFA--DVQVVAPDRNRSGASNSLTLESSLRTFTFD---NGDIAVQMGTPTDCVYLG 76 (254)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEESSCCTTCTTCCCCSSCCEEEECT---TSCEEEETCCHHHHHHHH
T ss_pred CeEEEEcCCCCCCHHHHHHHHHHHhCC--cEEEEeeCCCCcCccCCcCCCCCeEEEEeC---CCCeEECCCCHHHHHHHH
Confidence 799999999999999999999999865 999999999999999999999999999874 3469999 9999999999
Q ss_pred hhcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 023840 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILAE 173 (276)
Q Consensus 94 l~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~~ 173 (276)
|++ +++.+|||||||||+|.|+|.+++||||||||+||+++||||||||+... .+|+.|++++.+++++++
T Consensus 77 l~~-ll~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~------~~~~~aa~~~~~li~~l~-- 147 (254)
T 2v4n_A 77 VNA-LMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGY------QHYDTAAAVTCALLRGLS-- 147 (254)
T ss_dssp HHT-TSSSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEESSS------SCHHHHHHHHHHHHHHHH--
T ss_pred Hhh-ccCCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecCcc------cCHHHHHHHHHHHHHHHH--
Confidence 997 56779999999999999999999999999999999999999999999631 389999999999988876
Q ss_pred HHhCCCCCCcEEEecCCCCC-CCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCC
Q 023840 174 IRNQTYPERCFLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDT 243 (276)
Q Consensus 174 ~~~~~~p~~~~LNVN~P~~~-~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~ 243 (276)
+..+|++++||||||..+ .+.+|+|+||||++.|.+.+.++ .+|||++|||.+....+.+..++||+
T Consensus 148 --~~~lp~~~~lNVN~P~~~~~~~kg~~~tr~g~~~~~~~~~~~-~dp~g~~~yw~~~~~~~~~~~~gtD~ 215 (254)
T 2v4n_A 148 --REPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQ-EDPRGNTLYWIGPPGDKYDAGPDTDF 215 (254)
T ss_dssp --HSCCCSCSEEEEEECSSCGGGCCCEEECBCCEESCCCCEEEE-ECTTSCEEEEECCCCCEEECSTTBHH
T ss_pred --HcCCCccceEEecCCCCCcccCCceEEEECCccccccceeEe-ECCCCCeEEEeCCCccCCCCCCCCHH
Confidence 456899999999999976 57999999999999998888776 59999999999854444444667776
No 6
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=100.00 E-value=1.2e-69 Score=492.56 Aligned_cols=210 Identities=35% Similarity=0.495 Sum_probs=184.3
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCC----CCeeEEecCChHHHH
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFD----GVTAYAVSGTPADCA 90 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~----g~~~~~v~GTPaDcV 90 (276)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+++||++++++.. +...|+|+|||+|||
T Consensus 1 M~ILlTNDDGi~apGi~aL~~~l~~~g--~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGIYSPGLWALAEAASQFG--EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHTTTS--EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 699999999999999999999999877 99999999999999999999999999998642 335799999999999
Q ss_pred HHhhhcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHH
Q 023840 91 SLGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAI 170 (276)
Q Consensus 91 ~~al~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l 170 (276)
++||+ | +.+|||||||||+|.|+|.+++||||||||+||+++||||||||+.... ...+|+.|++++.++++++
T Consensus 79 ~lal~--l-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~~~~---~~~~~~~aa~~~~~li~~l 152 (244)
T 2e6c_A 79 ALGLH--L-FGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVPLNG---EVPDFAGLRPWLLRTLETL 152 (244)
T ss_dssp HHHHH--H-SCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEECCSS---SCCCHHHHHHHHHHHHHHH
T ss_pred HHHHc--C-CCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEeccCCC---CCCCHHHHHHHHHHHHHHH
Confidence 99998 4 6789999999999999999999999999999999999999999996321 1248999999999998887
Q ss_pred HHHHHhCCCCCCcEEEecCCCCCCCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCC
Q 023840 171 LAEIRNQTYPERCFLNIDLPTDIPNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDT 243 (276)
Q Consensus 171 ~~~~~~~~~p~~~~LNVN~P~~~~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~ 243 (276)
++ . |++++|||||| .+.+|+|+||||++.|.+.+.++ .+|+|++|||.+....+.+ .++||+
T Consensus 153 ~~----~--p~~~~lNVN~P---~~~~g~~~tr~g~~~~~~~~~~~-~dp~g~~~yw~~g~~~~~~-~~~tD~ 214 (244)
T 2e6c_A 153 LR----L--ERPFLVNVNLP---LRPKGFLWTRQSVRAYEGVVIPG-EDPMGRPFYWFAPRPLKEA-EEGTDR 214 (244)
T ss_dssp TT----S--CSSCEEEEECC---SSCCEEEECBCCCCCEECCEEEE-ECTTSCEEEEECCEESSCC-CTTBHH
T ss_pred Hh----C--CcCcEEEeeCC---CccCCeEEEECCCCccccceEEE-ECCCCCeEEEeCCCcCCCC-CCCcHH
Confidence 63 3 88999999999 45899999999999998888776 6999999999974222333 556665
No 7
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=100.00 E-value=3e-69 Score=498.41 Aligned_cols=217 Identities=29% Similarity=0.394 Sum_probs=189.2
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHHHhh
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCASLGV 94 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~~al 94 (276)
|||||||||||+||||++|+++|++.| +|+||||++||||+||++|+.+||++++++..+...|+|+|||+|||++||
T Consensus 1 M~ILlTNDDGi~ApGi~aL~~aL~~~g--~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~lal 78 (280)
T 1l5x_A 1 MKILVTNDDGVHSPGLRLLYQFALSLG--DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLAT 78 (280)
T ss_dssp CEEEEECSSCTTCHHHHHHHHHHGGGS--EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCcHhHHHHHHHHHhCC--CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHHH
Confidence 699999999999999999999999987 999999999999999999999999999986544467999999999999999
Q ss_pred hcccCCCCCcEEEecCCCCCCCccc-cccchhHHHHHHHHHcCCCEEEEeeecCCCCCC---CcccHHHHHHHHHHHHHH
Q 023840 95 SQALFPSVPDLVISGINMGSNCGYH-VVYSGTVAGAREAFFHGVPSVSISYDWVGGKSN---VNDYTLAAEACLPIINAI 170 (276)
Q Consensus 95 ~~~l~~~~PDLVVSGIN~G~N~G~~-v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~---~~~~~~aa~~~~~li~~l 170 (276)
++ + +.+|||||||||+|.|+|.+ ++||||||||+||+++||||||||+........ ..+|+.|++++.++++++
T Consensus 79 ~~-l-~~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~~~~~~~~~~~~~~~~~aa~~~~~lv~~l 156 (280)
T 1l5x_A 79 FG-L-GRKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAYLENWNELLNNKEAVEIMGAVVSSTASYV 156 (280)
T ss_dssp HH-H-TSCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEECCSCHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hc-C-CCCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEccccCCCcccccccCHHHHHHHHHHHHHHH
Confidence 97 5 77999999999999999999 999999999999999999999999963211100 137999999999999888
Q ss_pred HHHHHhCCCCCCc-EEEecCCCCC-CCCCCEEEEecccccccceEEEeeecCCCceeeeeccCCCCCcccccCCC
Q 023840 171 LAEIRNQTYPERC-FLNIDLPTDI-PNNKGYKLTKQGTSIFKMGWRRVTSEMQGGKMLSTMTMDTDSAVTIETDT 243 (276)
Q Consensus 171 ~~~~~~~~~p~~~-~LNVN~P~~~-~~~~g~~~tr~g~~~~~~~~~~~~~~~~G~~~yw~~t~~~~~~~~~~~~~ 243 (276)
++ ..+|+++ +||||||..+ .+.| +++||||++.|.+.++++ .+|+|++|||.+.... +..++||+
T Consensus 157 ~~----~~lp~~~d~LNVN~P~~~~~~~k-~~~tr~g~~~~~~~~~~~-~dprg~~~yw~~g~~~--~~~~~tD~ 223 (280)
T 1l5x_A 157 LK----NGMPQGVDVISVNFPRRLGRGVR-AKLVKAAKLRYAQQVVER-VDPRGVRYYWLYGRDL--APEPETDV 223 (280)
T ss_dssp HH----HCSCTTCSEEEEEECSCCCTTCC-EEECBCCSCSBCSCCEEE-ECTTSCEEEECSCSBC--CCCTTBHH
T ss_pred Hh----cCCCCCCceEEecCCCCCCCCce-EEEEECCCcccccceEEE-ECCCCCeEEEeCCCcC--CCCCCChH
Confidence 74 3589999 9999999986 5688 999999999998888876 5999999999974222 22566766
No 8
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=94.81 E-value=0.015 Score=53.28 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=28.5
Q ss_pred CCCCeEEEecCCCCC-CcCHHHHHHHHHhcCCccEEEEee
Q 023840 12 DHKPTIMVTNDDGID-APGLRSLVRVLVSTNRYTVQVCAP 50 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~-spGi~aL~~aL~~~g~~~V~VVAP 50 (276)
...||||++...|.. --....|+++|++.| |+|.|++|
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~ 56 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAG-HDVLIAVA 56 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEES
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCC-CEEEEecc
Confidence 456999999764321 123578999999999 89999998
No 9
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=93.99 E-value=0.1 Score=47.52 Aligned_cols=41 Identities=20% Similarity=0.092 Sum_probs=28.0
Q ss_pred CCCCCeEEEecCCCC-CCcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 11 SDHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 11 ~~~~~~ILlTNDDGi-~spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
+..+||||++..-+. +.-.+..|+++|++.| |+|.|+++..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~G-heV~v~~~~~ 53 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAG-HEVLVAASEN 53 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEEEGG
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCC-CEEEEEcCHH
Confidence 345799998865321 1123568999999999 8999999743
No 10
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=92.94 E-value=0.28 Score=44.27 Aligned_cols=37 Identities=16% Similarity=0.128 Sum_probs=26.6
Q ss_pred CCeEEEecCCCC-CCcCHHHHHHHHHhcCCccEEEEeeC
Q 023840 14 KPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (276)
Q Consensus 14 ~~~ILlTNDDGi-~spGi~aL~~aL~~~g~~~V~VVAP~ 51 (276)
+||||++..-+. +--....|+++|++.| |+|.|+++.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~G-heV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASG-HEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTT-CEEEEEECH
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCC-CEEEEecCh
Confidence 479988765321 1123467999999999 899999864
No 11
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=92.94 E-value=0.69 Score=41.57 Aligned_cols=38 Identities=8% Similarity=-0.031 Sum_probs=28.4
Q ss_pred CCCCeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
-+.||||++. +.+.| ..+|+++|++.| |+|+++.+...
T Consensus 20 ~~~MRIL~~~---~p~~GHv~P~l~LA~~L~~rG-h~Vt~~t~~~~ 61 (400)
T 4amg_A 20 FQSMRALFIT---SPGLSHILPTVPLAQALRALG-HEVRYATGGDI 61 (400)
T ss_dssp -CCCEEEEEC---CSSHHHHGGGHHHHHHHHHTT-CEEEEEECSST
T ss_pred CCCCeEEEEC---CCchhHHHHHHHHHHHHHHCC-CEEEEEeCcch
Confidence 3679999985 22322 457999999999 89999987643
No 12
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=92.74 E-value=0.19 Score=45.46 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=27.8
Q ss_pred CCCCeEEEecCCCC-CCcCHHHHHHHHHhcCCccEEEEeeC
Q 023840 12 DHKPTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (276)
Q Consensus 12 ~~~~~ILlTNDDGi-~spGi~aL~~aL~~~g~~~V~VVAP~ 51 (276)
..+||||++.-.+. +.-...+|+++|++.| |+|.|+++.
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~G-heV~v~~~~ 57 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAG-HEVTFATGE 57 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTT-CEEEEEECG
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCC-CEEEEEccH
Confidence 45799998872211 1112457999999999 899999875
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=92.07 E-value=0.43 Score=43.67 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=27.0
Q ss_pred CCCeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 13 HKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
..||||+..- .+.| +..|+++|++.| |+|+++.+...
T Consensus 6 ~m~kIl~~~~---~~~Gh~~p~~~la~~L~~~G-~~V~~~~~~~~ 46 (430)
T 2iyf_A 6 TPAHIAMFSI---AAHGHVNPSLEVIRELVARG-HRVTYAIPPVF 46 (430)
T ss_dssp --CEEEEECC---SCHHHHGGGHHHHHHHHHTT-CEEEEEECGGG
T ss_pred ccceEEEEeC---CCCccccchHHHHHHHHHCC-CeEEEEeCHHH
Confidence 3479998753 2233 567999999999 89999998754
No 14
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=91.53 E-value=0.38 Score=43.13 Aligned_cols=36 Identities=17% Similarity=0.126 Sum_probs=26.1
Q ss_pred CeEEEecCCCC-CCcCHHHHHHHHHhcCCccEEEEeeC
Q 023840 15 PTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPD 51 (276)
Q Consensus 15 ~~ILlTNDDGi-~spGi~aL~~aL~~~g~~~V~VVAP~ 51 (276)
+|||++.--|. +.--...|+++|++.| |+|+++++.
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~G-heV~v~~~~ 41 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRG-HRITYVTTP 41 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCC-CEEEEEcCH
Confidence 48998864321 1122567999999999 899999974
No 15
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=91.06 E-value=0.75 Score=42.12 Aligned_cols=38 Identities=24% Similarity=0.200 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 13 HKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
..|+||+.. ..+.| ..+|+++|++.| |+|+++++...+
T Consensus 11 ~~~~Il~~~---~~~~GHv~p~l~la~~L~~~G-h~V~~~~~~~~~ 52 (424)
T 2iya_A 11 TPRHISFFN---IPGHGHVNPSLGIVQELVARG-HRVSYAITDEFA 52 (424)
T ss_dssp CCCEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGGH
T ss_pred ccceEEEEe---CCCCcccchHHHHHHHHHHCC-CeEEEEeCHHHH
Confidence 357999983 33444 467999999999 899999987653
No 16
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=90.36 E-value=0.43 Score=43.38 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=27.7
Q ss_pred CCCCeEEEecCCCCC-CcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 12 DHKPTIMVTNDDGID-APGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~-spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
.+.||||++.--|.. .--..+|+++|++.| |+|+++++..
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~G-h~V~v~~~~~ 58 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRG-HRVSYVTAGG 58 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTT-CEEEEEECGG
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCC-CEEEEEeCHH
Confidence 345899998742210 112567999999999 8999999644
No 17
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=84.19 E-value=1.8 Score=38.82 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=31.8
Q ss_pred CCCeEEEecCCCCC--CcC----HHHHHHHHHhcCCccEEEEeeCCCCC
Q 023840 13 HKPTIMVTNDDGID--APG----LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (276)
Q Consensus 13 ~~~~ILlTNDDGi~--spG----i~aL~~aL~~~g~~~V~VVAP~~~qS 55 (276)
++||||+..+.-.. .-| +..|+++|.+.| |+|.|++|.....
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G-~~V~v~~~~~~~~ 48 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTPSHGRF 48 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTT-CEEEEEEECTTCS
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCC-CeEEEEecCCCCc
Confidence 36899998866433 223 677999999999 8999999886543
No 18
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=77.60 E-value=3 Score=38.89 Aligned_cols=41 Identities=12% Similarity=0.151 Sum_probs=30.6
Q ss_pred CCCCeEEEecCCCCCC------------cC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 12 DHKPTIMVTNDDGIDA------------PG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~s------------pG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
+++||||+.++..+.. -| +..|+++|.+.| |+|.|+++...
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 61 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG-VQVDIITRRIK 61 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcC-CeEEEEeCCCC
Confidence 3469999999876432 22 567899999999 89999998654
No 19
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=73.72 E-value=4 Score=36.16 Aligned_cols=46 Identities=24% Similarity=0.187 Sum_probs=30.2
Q ss_pred cCCCCCCeEEEecCCCCCC-c----CHHHHHHHHHhcCCccEEEEeeCCCCC
Q 023840 9 VNSDHKPTIMVTNDDGIDA-P----GLRSLVRVLVSTNRYTVQVCAPDSEKS 55 (276)
Q Consensus 9 m~~~~~~~ILlTNDDGi~s-p----Gi~aL~~aL~~~g~~~V~VVAP~~~qS 55 (276)
|...+.||||+..+.-... - -+..|+++|++.| |+|.|+++.....
T Consensus 15 ~~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~ 65 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAG-HEVSVLAPASPHV 65 (406)
T ss_dssp ------CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTT-CEEEEEESCCTTS
T ss_pred ccCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCC-CeEEEEecCCccc
Confidence 4456779999998653332 2 3567999999998 7999999876543
No 20
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=70.45 E-value=2.6 Score=36.88 Aligned_cols=40 Identities=13% Similarity=0.055 Sum_probs=29.4
Q ss_pred CCeEEEecCC---------------CCC--CcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 14 KPTIMVTNDD---------------GID--APGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 14 ~~~ILlTNDD---------------Gi~--spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
.||||+.++. ... ..-+..|+++|++.| |+|.|+.+....
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~~~~ 59 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAPGSP 59 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCTTSC
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecCCCC
Confidence 4899998876 111 123567899999998 899999987644
No 21
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=68.46 E-value=7.6 Score=35.00 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=30.6
Q ss_pred CCCCeEEEecCCCCC--------CcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 12 DHKPTIMVTNDDGID--------APG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~--------spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
++.||||+.+++-.. .-| +..|+++|.+.| |+|.|+++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G-~~V~v~~~~~~ 70 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQG-IEVDIYTRATR 70 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcC-CEEEEEecCCC
Confidence 467899999986543 123 567899999999 89999998753
No 22
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=65.92 E-value=7.7 Score=35.25 Aligned_cols=32 Identities=16% Similarity=0.276 Sum_probs=22.0
Q ss_pred CCeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEe
Q 023840 14 KPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 14 ~~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVA 49 (276)
+.||||+-= -+-| -.+|+++|++.| |+|..+.
T Consensus 2 ~~~i~i~~G---GTgGHi~palala~~L~~~g-~~V~~vg 37 (365)
T 3s2u_A 2 KGNVLIMAG---GTGGHVFPALACAREFQARG-YAVHWLG 37 (365)
T ss_dssp -CEEEEECC---SSHHHHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CCcEEEEcC---CCHHHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 357999831 1223 357999999999 8998764
No 23
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=65.77 E-value=4.9 Score=35.43 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=29.6
Q ss_pred CCCeEEEecC------C----CCCCcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 13 HKPTIMVTND------D----GIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 13 ~~~~ILlTND------D----Gi~spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
++.-|+|||- | |+.-.=+..-+++|+++| ++|.++.|...+
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~~aSp~g~~ 60 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAG-FEVDVASETGTF 60 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCc
Confidence 3444667882 2 455555667789999999 799999997654
No 24
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=64.13 E-value=8.3 Score=32.54 Aligned_cols=41 Identities=17% Similarity=0.345 Sum_probs=32.3
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
+..+|||. ||++++-+ +.++.+.|++.|-..|.+++|-...
T Consensus 119 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~ 160 (208)
T 1wd5_A 119 KGRDVVLV-DDGVATGASMEAALSVVFQEGPRRVVVAVPVASP 160 (208)
T ss_dssp TTSEEEEE-CSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH
T ss_pred CCCEEEEE-CCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH
Confidence 45678888 99999743 7788999999996678888876543
No 25
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=58.81 E-value=5 Score=35.25 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=28.7
Q ss_pred CCeEEEecC----------CCCCCcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 14 KPTIMVTND----------DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 14 ~~~ILlTND----------DGi~spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
+.-|++||- +|+...=+..-++.|+++| ++|.++.|....
T Consensus 5 kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG-~~V~iaS~~g~~ 54 (244)
T 3kkl_A 5 RALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHG-FEVDFVSETGGF 54 (244)
T ss_dssp EEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTT-CEEEEEESSSCC
T ss_pred EEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 334667772 3444455666899999999 799999997654
No 26
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=57.90 E-value=7.3 Score=34.03 Aligned_cols=37 Identities=8% Similarity=0.017 Sum_probs=27.0
Q ss_pred CeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
||||+..+.-...-| +..|+++|++.| |+|.|+++..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~ 41 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARG-HHVRVYTQSW 41 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTT-CCEEEEESEE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCC-CeEEEEecCC
Confidence 578887665333333 667999999999 8999999863
No 27
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=56.70 E-value=5.7 Score=36.61 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=28.2
Q ss_pred CeEEEecCCCCC---CcC----HHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGID---APG----LRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~---spG----i~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
||||+.++.-.. .-| +..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHG-VRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 689988876432 223 567899999999 8999999964
No 28
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=55.14 E-value=9.7 Score=34.97 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=27.6
Q ss_pred CCCCeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCC
Q 023840 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
...||||++. ..+.| ..+|+++|++.| |+|+++++..
T Consensus 18 ~~~mrIl~~~---~~~~GHv~p~l~la~~L~~~G-heV~~~~~~~ 58 (441)
T 2yjn_A 18 GSHMRVVFSS---MASKSHLFGLVPLAWAFRAAG-HEVRVVASPA 58 (441)
T ss_dssp -CCCEEEEEC---CSCHHHHTTTHHHHHHHHHTT-CEEEEEECGG
T ss_pred CCccEEEEEc---CCCcchHhHHHHHHHHHHHCC-CeEEEEeCch
Confidence 3458999993 33323 557999999999 8999999865
No 29
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=54.78 E-value=6.6 Score=36.19 Aligned_cols=37 Identities=11% Similarity=0.169 Sum_probs=27.8
Q ss_pred CeEEEecCCCCC---CcC----HHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGID---APG----LRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~---spG----i~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
||||+.++.-.. .-| +..|+++|.+.| |+|.|++|..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G-~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADG-VDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTT-CEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcC-CEEEEEecCc
Confidence 689888775322 223 467999999999 8999999864
No 30
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=51.54 E-value=18 Score=29.63 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=29.5
Q ss_pred eEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 16 TIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 16 ~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
+|++-=-||.+...+...++.|+.+| ++|.+++|..
T Consensus 7 kv~ill~~g~~~~e~~~~~~~l~~ag-~~v~~~s~~~ 42 (190)
T 4e08_A 7 SALVILAPGAEEMEFIIAADVLRRAG-IKVTVAGLNG 42 (190)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred EEEEEECCCchHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 44333348999989999999999999 7999999986
No 31
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=50.93 E-value=40 Score=31.99 Aligned_cols=42 Identities=24% Similarity=0.135 Sum_probs=28.5
Q ss_pred CCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeee
Q 023840 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (276)
Q Consensus 102 ~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~ 145 (276)
.-||||.| +|.--.....=.-.+|-|+.|..+|+|.||++-.
T Consensus 287 ~ADLVITG--EG~~D~Qtl~GK~p~gVa~~A~~~~vPviaiaG~ 328 (383)
T 3cwc_A 287 DADLVITG--EGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGS 328 (383)
T ss_dssp HCSEEEEC--CEESCC----CHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEEC--CCCCcCcCCCCcHHHHHHHHHHHhCCCEEEEeCC
Confidence 57999998 3433333333233468899999999999999864
No 32
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=50.38 E-value=5.3 Score=36.54 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=26.3
Q ss_pred CeEEEecCCCC-CCcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGI-DAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi-~spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
||||++-+... +.-.+.+|+++|++.| |+|+|++|..
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~G-h~V~v~~~~~ 38 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELG-ADARMCLPPD 38 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTT-CCEEEEECGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCC-CeEEEEeCHH
Confidence 57887765321 1123678999999999 8999999854
No 33
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=50.05 E-value=25 Score=31.40 Aligned_cols=40 Identities=20% Similarity=0.160 Sum_probs=29.3
Q ss_pred CCCCeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 12 DHKPTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
.++|+||+.++.. ..-| +..|+++|++.| |+|.|+.....
T Consensus 38 ~~~mkIl~v~~~~-~~GG~~~~~~~l~~~L~~~G-~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTS-FGGGVAEILHSLVPLLRSIG-IEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCS-SSSTHHHHHHHHHHHHHHTT-CEEEEEECCCC
T ss_pred hhccEEEEEeCCC-CCCCHHHHHHHHHHHHHhCC-CeEEEEEccCC
Confidence 4679999888763 3344 345889999998 89988877543
No 34
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=47.74 E-value=19 Score=30.93 Aligned_cols=29 Identities=17% Similarity=0.352 Sum_probs=22.6
Q ss_pred CeEEEecCCCCCCcCH--HHHHHHHHhcCCccEEEEe
Q 023840 15 PTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi--~aL~~aL~~~g~~~V~VVA 49 (276)
||||||= +.|. +.|++.|.+.| |+|+++.
T Consensus 1 MkILVTG-----atGfIG~~L~~~L~~~G-~~V~~l~ 31 (298)
T 4b4o_A 1 MRVLVGG-----GTGFIGTALTQLLNARG-HEVTLVS 31 (298)
T ss_dssp CEEEEET-----TTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred CEEEEEC-----CCCHHHHHHHHHHHHCC-CEEEEEE
Confidence 7899993 3343 56899999999 8998874
No 35
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=46.24 E-value=13 Score=33.81 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=26.2
Q ss_pred CeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 15 ~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
||||++ +..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 MrIl~~---~~~~~GH~~p~l~la~~L~~~G-h~V~~~~~~~~ 39 (416)
T 1rrv_A 1 MRVLLS---VCGTRGDVEIGVALADRLKALG-VQTRMCAPPAA 39 (416)
T ss_dssp CEEEEE---EESCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEE---ecCCCccHHHHHHHHHHHHHCC-CeEEEEeCHHH
Confidence 578887 233444 557999999999 89999998753
No 36
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=45.52 E-value=19 Score=32.72 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=27.1
Q ss_pred CeEEEecCCCCCCcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 15 PTIMVTNDDGIDAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 15 ~~ILlTNDDGi~spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
||||++- ..+.| ..+|+++|++.| |+|+++.+...
T Consensus 1 M~Il~~~---~~~~GHv~P~l~la~~L~~~G-h~V~~~~~~~~ 39 (415)
T 1iir_A 1 MRVLLAT---CGSRGDTEPLVALAVRVRDLG-ADVRMCAPPDC 39 (415)
T ss_dssp CEEEEEC---CSCHHHHHHHHHHHHHHHHTT-CEEEEEECGGG
T ss_pred CeEEEEc---CCCchhHHHHHHHHHHHHHCC-CeEEEEcCHHH
Confidence 6888883 33444 566999999999 89999998764
No 37
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=42.96 E-value=19 Score=31.37 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=25.9
Q ss_pred CeEEEecCCCCCCcCH-H---HHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGIDAPGL-R---SLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi-~---aL~~aL~~~g~~~V~VVAP~~ 52 (276)
||||+... |. .|- + .|+++|++.| |+|.++.+..
T Consensus 7 mkIl~~~~-~~--gG~~~~~~~la~~L~~~G-~~V~v~~~~~ 44 (364)
T 1f0k_A 7 KRLMVMAG-GT--GGHVFPGLAVAHHLMAQG-WQVRWLGTAD 44 (364)
T ss_dssp CEEEEECC-SS--HHHHHHHHHHHHHHHTTT-CEEEEEECTT
T ss_pred cEEEEEeC-CC--ccchhHHHHHHHHHHHcC-CEEEEEecCC
Confidence 89999872 32 233 3 6999999998 8999999865
No 38
>3u27_C Microcompartments protein; structural genomics, PSI-biology, MCSG, alpha-beta-alpha FOL bacterial microcompartment, shell protein; 1.85A {Leptotrichia buccalis c-1013-b}
Probab=42.78 E-value=9.4 Score=33.69 Aligned_cols=106 Identities=17% Similarity=0.094 Sum_probs=70.7
Q ss_pred CcCHHHHHHHHHhcCCccEEEEeeCCCCCcCccccc-CCCCee-------e---ee-----------------ccCCCC-
Q 023840 27 APGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSIT-WRHPIS-------A---RP-----------------ADFDGV- 77 (276)
Q Consensus 27 spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit-~~~pl~-------v---~~-----------------~~~~g~- 77 (276)
+++|.+.=+++|++ +|-++-+..-+-|.||+.. +...+- + +. ...+|.
T Consensus 48 ~~~I~AaD~A~KaA---~Vel~~~r~~~gg~g~~~~~~~G~~i~iigG~dvs~V~~av~~~~~~~~~~~~~~~~~~~gh~ 124 (220)
T 3u27_C 48 DVTYTALDEATKKA---VVDVAYGKSFYGGAANANTKLAGEVIGILSGPTPAEVKSGLAAAVDFIENEAAFISANDDDSI 124 (220)
T ss_dssp HHHHHHHHHHHHHS---SCEEEEEEECTTCGGGCCSTTTTTEEEEEEESSHHHHHHHHHHHHHHHHHTCCEEECSTTSCC
T ss_pred hHHHHHHHHHHhhc---CeEEEEEeeccccCcccccccCccEEEEecCCCHHHHHHHHHHHHHHHHhhHhheeccCCCCe
Confidence 57888888888863 6888888877777777754 222111 0 00 000111
Q ss_pred -----------------------eeE-EecCChHHHHHHhhhcccCCCCCcEE-EecCCCCCCCccccccchhHHHHHHH
Q 023840 78 -----------------------TAY-AVSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYHVVYSGTVAGAREA 132 (276)
Q Consensus 78 -----------------------~~~-~v~GTPaDcV~~al~~~l~~~~PDLV-VSGIN~G~N~G~~v~ySGTVgAA~Ea 132 (276)
.++ .+.++|+ ...+|.|..+.-...+|+ +..|..|.+.|. ++.+|.|+|..+|
T Consensus 125 ~~~ah~ia~~~~al~~~~g~~~g~AiGil~~~p~-~ai~aaD~A~KaA~V~l~~~~~p~~~~~~~g-~~itGdvsAV~aA 202 (220)
T 3u27_C 125 AYFAHCISRTGTYLSKTAGIPEGESLAYLIAPPL-EAMYALDVALKAADVRLVAFYGPPSETNFGG-GLLTGSQSACKAA 202 (220)
T ss_dssp EEEEEEESSCCHHHHHHHTSCTTCCEEEEEESHH-HHHHHHHHHHHHSSCEEEEEECSCCTTSCEE-EEEESCHHHHHHH
T ss_pred EEEEeecCCcHHHHHHhcCCCCcceEEEEEcCCH-HHHHHHHHHHhhCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHH
Confidence 122 3678999 788888865544578898 577888888877 8899999998888
Q ss_pred HHcCC
Q 023840 133 FFHGV 137 (276)
Q Consensus 133 ~~~Gi 137 (276)
...+.
T Consensus 203 v~a~~ 207 (220)
T 3u27_C 203 CDAFA 207 (220)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 75543
No 39
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=41.34 E-value=47 Score=27.26 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=32.7
Q ss_pred CCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 14 ~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
.++|+|-=-||.....+...++.|+.+| ++|.+++|....
T Consensus 23 ~~kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~~ 62 (193)
T 1oi4_A 23 SKKIAVLITDEFEDSEFTSPADEFRKAG-HEVITIEKQAGK 62 (193)
T ss_dssp CCEEEEECCTTBCTHHHHHHHHHHHHTT-CEEEEEESSTTC
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCc
Confidence 3566665558999889999999999998 699999998643
No 40
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=41.21 E-value=1.4e+02 Score=24.04 Aligned_cols=104 Identities=20% Similarity=0.198 Sum_probs=57.1
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCCh-HHHHHHh
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTP-ADCASLG 93 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~GTP-aDcV~~a 93 (276)
|+||||==-|. -| +++++.|.+.| ++|+++.-..++- .. . . +...+..|=+= .+.+.-+
T Consensus 1 M~ilItGatG~--iG-~~l~~~L~~~g-~~V~~~~R~~~~~--~~---~-~----------~~~~~~~D~~d~~~~~~~~ 60 (219)
T 3dqp_A 1 MKIFIVGSTGR--VG-KSLLKSLSTTD-YQIYAGARKVEQV--PQ---Y-N----------NVKAVHFDVDWTPEEMAKQ 60 (219)
T ss_dssp CEEEEESTTSH--HH-HHHHHHHTTSS-CEEEEEESSGGGS--CC---C-T----------TEEEEECCTTSCHHHHHTT
T ss_pred CeEEEECCCCH--HH-HHHHHHHHHCC-CEEEEEECCccch--hh---c-C----------CceEEEecccCCHHHHHHH
Confidence 57899832222 12 56888898888 7888876432110 00 0 1 12222333222 2333322
Q ss_pred hhcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCE-EEEee
Q 023840 94 VSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPS-VSISY 144 (276)
Q Consensus 94 l~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPa-IAvS~ 144 (276)
+ . .+|.||.-......--.++...||.-.+..+...|++- |-+|.
T Consensus 61 ~-----~-~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 61 L-----H-GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp T-----T-TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred H-----c-CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 2 2 58999964444333334567888887777777788864 44554
No 41
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=40.48 E-value=19 Score=26.67 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=17.2
Q ss_pred cCCCCCCeEEEecCCCCCCcCHHHHHHHHHhcC
Q 023840 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (276)
Q Consensus 9 m~~~~~~~ILlTNDDGi~spGi~aL~~aL~~~g 41 (276)
|++.++++|||..||-... ..|.+.|++.|
T Consensus 1 M~~~~~~~iLivdd~~~~~---~~l~~~l~~~g 30 (140)
T 3grc_A 1 MSLAPRPRILICEDDPDIA---RLLNLMLEKGG 30 (140)
T ss_dssp ----CCSEEEEECSCHHHH---HHHHHHHHHTT
T ss_pred CCCCCCCCEEEEcCCHHHH---HHHHHHHHHCC
Confidence 5556778999999885433 33445565555
No 42
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=40.33 E-value=53 Score=27.34 Aligned_cols=39 Identities=23% Similarity=0.286 Sum_probs=31.4
Q ss_pred CeEEEec-----C---CCCCCcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 15 PTIMVTN-----D---DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 15 ~~ILlTN-----D---DGi~spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
.-||++| | ||+...-+...++.|+.+| ++|.+++|....
T Consensus 8 v~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag-~~v~~vs~~~~~ 54 (224)
T 1u9c_A 8 VLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKG-YDVKVASIQGGE 54 (224)
T ss_dssp EEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTT-CEEEEEESSCBC
T ss_pred EEEEECCcccccCCCCCceeHHHHHHHHHHHHHCC-CeEEEECCCCCc
Confidence 3466774 2 8888888899999999999 799999998753
No 43
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=40.21 E-value=1.1e+02 Score=25.70 Aligned_cols=48 Identities=17% Similarity=0.134 Sum_probs=28.6
Q ss_pred hHHHHHHHHHcCCCEEEEeeec-CCCCCCCcccHH----HHHHHHHHHHHHHH
Q 023840 125 TVAGAREAFFHGVPSVSISYDW-VGGKSNVNDYTL----AAEACLPIINAILA 172 (276)
Q Consensus 125 TVgAA~Ea~~~GiPaIAvS~~~-~~~~~~~~~~~~----aa~~~~~li~~l~~ 172 (276)
+.|-|.-|..+|+|.+++..=. ..+.....+|+. |++.+.+++..+++
T Consensus 180 ~aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~~~~Aa~~~a~~v~~~l~ 232 (236)
T 4g41_A 180 GAAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEAGKRSAQILMTFLE 232 (236)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666778999999997521 112223445543 55555666666664
No 44
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=39.70 E-value=22 Score=28.21 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=31.4
Q ss_pred CCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 14 ~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
.++|++-=-||.+..-+-..++.|+..| ++|.+++|..
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRIKEEG-HEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CcEEEEEeCCCccHHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 3566665567899888999999999998 7999999975
No 45
>2cve_A Hypothetical protein TTHA1053; COG1739, UPF0029, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: TLA; 1.60A {Thermus thermophilus} SCOP: d.14.1.11 d.58.11.2
Probab=39.02 E-value=21 Score=30.70 Aligned_cols=30 Identities=23% Similarity=0.218 Sum_probs=23.7
Q ss_pred EecCCCCCC--cCHHHHHHHHHhcCCccEEEEe
Q 023840 19 VTNDDGIDA--PGLRSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 19 lTNDDGi~s--pGi~aL~~aL~~~g~~~V~VVA 49 (276)
=.||||-.+ .|...| +.|+..+..||+||.
T Consensus 59 ~~~DDGEp~GTAG~piL-~~L~~~~l~nv~vVV 90 (191)
T 2cve_A 59 RFSDDGEPSGTAGRPIL-HAIEAQGLDRVAVLV 90 (191)
T ss_dssp EEECTTSSTTSSHHHHH-HHHHHTTBCSEEEEE
T ss_pred ccCCCCCcCCcChHHHH-HHHHHcCCCcEEEEE
Confidence 469999987 898754 578888888988874
No 46
>1vi7_A Hypothetical protein YIGZ; structural genomics, unknown function; 2.80A {Escherichia coli} SCOP: d.14.1.11 d.58.11.2
Probab=38.61 E-value=24 Score=30.91 Aligned_cols=30 Identities=23% Similarity=0.223 Sum_probs=24.0
Q ss_pred EecCCCCCC--cCHHHHHHHHHhcCCccEEEEe
Q 023840 19 VTNDDGIDA--PGLRSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 19 lTNDDGi~s--pGi~aL~~aL~~~g~~~V~VVA 49 (276)
=.||||-.+ .|...| +.|+..+..||+||.
T Consensus 71 ~~sDDGEp~GTAG~piL-~~L~~~~l~nv~vVV 102 (217)
T 1vi7_A 71 GFSDDGEPAGTAGKPML-AQLMGSGVGEITAVV 102 (217)
T ss_dssp EEECTTSCTTSSSHHHH-HHHHHHTCCSEEEEC
T ss_pred ccCCCCCCCCcchHHHH-HHHHHcCCCCEEEEE
Confidence 369999988 998855 568888888998874
No 47
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=38.25 E-value=16 Score=32.54 Aligned_cols=37 Identities=14% Similarity=0.086 Sum_probs=25.9
Q ss_pred CeEEEecCCCCC-CcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGID-APGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~-spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
||||+...-+.. ---..+|+++|++.| |+|+++.+..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~G-h~V~~~~~~~ 38 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAG-HQVVMAANQD 38 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEEECGG
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCC-CEEEEEeCHH
Confidence 689998553210 112457899999999 8999998764
No 48
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.59 E-value=21 Score=26.05 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=15.8
Q ss_pred cCCCCCCeEEEecCCCCCCcCHHHHHHHHHhcC
Q 023840 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (276)
Q Consensus 9 m~~~~~~~ILlTNDDGi~spGi~aL~~aL~~~g 41 (276)
|.+.+.++|||..||-.... .|.+.|++.|
T Consensus 1 M~~~~~~~ilivdd~~~~~~---~l~~~L~~~g 30 (132)
T 3lte_A 1 MSLKQSKRILVVDDDQAMAA---AIERVLKRDH 30 (132)
T ss_dssp ------CEEEEECSCHHHHH---HHHHHHHHTT
T ss_pred CCCCCCccEEEEECCHHHHH---HHHHHHHHCC
Confidence 55566789999998855433 3445555555
No 49
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=37.58 E-value=32 Score=28.75 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=30.4
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
++|++-=-||....-+...++.|+.+| ++|.+++|..
T Consensus 10 ~~v~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~g 46 (208)
T 3ot1_A 10 KRILVPVAHGSEEMETVIIVDTLVRAG-FQVTMAAVGD 46 (208)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CeEEEEECCCCcHHHHHHHHHHHHHCC-CEEEEEEcCC
Confidence 355555558999889999999999999 7999999964
No 50
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=37.33 E-value=22 Score=31.21 Aligned_cols=36 Identities=14% Similarity=0.012 Sum_probs=27.9
Q ss_pred CCCeEEEecCCCCCCcC---HHHHHHHHHhcCCccEEEEe
Q 023840 13 HKPTIMVTNDDGIDAPG---LRSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG---i~aL~~aL~~~g~~~V~VVA 49 (276)
..|+|-|-||++..-.. ...|.+.|++.| |+|+=+-
T Consensus 2 ~~MkIaigsDha~~lK~~~i~~~l~~~L~~~G-~eV~D~G 40 (214)
T 3ono_A 2 NAMKIALMMENSQAAKNAMVAGELNSVAGGLG-HDVFNVG 40 (214)
T ss_dssp CCCEEEECCCGGGGGGHHHHHHHHHHHHHHTT-CEEEECS
T ss_pred CccEEEEECCCcHHHHChhHHHHHHHHHHHCC-CEEEEcC
Confidence 46899999999944444 337899999999 7888665
No 51
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=36.90 E-value=31 Score=27.99 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=32.6
Q ss_pred CCCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCC
Q 023840 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
+.++|+|-=-||.....+...++.|+.+| ++|.+++|...
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 47 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAIEAAG-GTTELISLEPG 47 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHCC-CEEEEEecCCC
Confidence 34566666568999888999999999998 69999999864
No 52
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=36.02 E-value=12 Score=38.09 Aligned_cols=37 Identities=16% Similarity=0.084 Sum_probs=31.6
Q ss_pred CeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCC
Q 023840 15 PTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
.-||++..||.+..-+.+++++|+++| .+|.||+|..
T Consensus 532 VaIL~a~~dGfe~~E~~~~~~~L~~aG-~~V~vVs~~~ 568 (688)
T 2iuf_A 532 VGLLASVNKPASIAQGAKLQVALSSVG-VDVVVVAERX 568 (688)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHGGGT-CEEEEEESSC
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHCC-CEEEEEeccC
Confidence 346777679999889999999999999 6999999963
No 53
>3gfh_A Ethanolamine utilization protein EUTL; bacterial mircocompartment, shell protein, structural protein; 2.20A {Escherichia coli} PDB: 3mpv_A 3i87_A 3i82_A
Probab=35.30 E-value=4.9 Score=35.63 Aligned_cols=51 Identities=20% Similarity=0.201 Sum_probs=38.4
Q ss_pred ecCChHHHHHHhhhcccCCCCCcEE-EecCCCCCCCccccccchhHHHHHHHHH
Q 023840 82 VSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYHVVYSGTVAGAREAFF 134 (276)
Q Consensus 82 v~GTPaDcV~~al~~~l~~~~PDLV-VSGIN~G~N~G~~v~ySGTVgAA~Ea~~ 134 (276)
+.++|+ ...+|.|..+.-...+|+ +..|..|.|.|. ++.+|.|+|..+|..
T Consensus 151 l~~~p~-~aI~aaD~A~KaA~V~l~~~~~p~~g~~~~g-~~itGdvsAV~aAv~ 202 (225)
T 3gfh_A 151 LVAPPL-EATYGIDAALKSADVQLATYVPPPSETNYSA-AFLTGSQAACKAACN 202 (225)
T ss_dssp EEECHH-HHHHHHHHHHHHSCCEEEEEECSCCTTSCEE-EEEESCSSSTTHHHH
T ss_pred EEcCcH-HHHHHHHHHHhhCCeEEEEEEcccCcCcEEE-EEEEEcHHHHHHHHH
Confidence 678999 888888865544578888 777778888777 778888877666653
No 54
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=34.67 E-value=19 Score=32.42 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=23.3
Q ss_pred cccccC---CCCCCeEEEecCC----CCCCcCHHHHHHHHHhcCCccEEEE
Q 023840 5 GIAIVN---SDHKPTIMVTNDD----GIDAPGLRSLVRVLVSTNRYTVQVC 48 (276)
Q Consensus 5 ~~~~m~---~~~~~~ILlTNDD----Gi~spGi~aL~~aL~~~g~~~V~VV 48 (276)
|+-+++ ..+.|||||-|=. +..+.=..+..+.|++.| |+|.|+
T Consensus 10 ~~~~~t~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G-~eV~v~ 59 (280)
T 4gi5_A 10 GVDLGTENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAG-HEVQVS 59 (280)
T ss_dssp ------------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred ccccCCCcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 444455 3578999999743 111112455677888888 799887
No 55
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=34.54 E-value=31 Score=27.07 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=25.3
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHH--HHcCCCEEEEeee
Q 023840 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREA--FFHGVPSVSISYD 145 (276)
Q Consensus 101 ~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea--~~~GiPaIAvS~~ 145 (276)
.+||||++-+|.-.=-|.++ -....+ ....+|.|.+|..
T Consensus 56 ~~~DlillD~~MP~mdG~el------~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDL------LKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHH------HHHHHHSTTTTTCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHHH------HHHHHhCCCCCCCeEEEEECC
Confidence 37999999999865444332 222222 2467999999864
No 56
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=34.53 E-value=26 Score=27.33 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=50.5
Q ss_pred CCCCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCCCcCcccccCCCCeeeeeccCCCCeeEEecCChHHHHH
Q 023840 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEKSAVSHSITWRHPISARPADFDGVTAYAVSGTPADCAS 91 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~qSg~g~sit~~~pl~v~~~~~~g~~~~~v~GTPaDcV~ 91 (276)
.+++||||.-||-..... |.+.|++.| ++|+-+| .+..++..
T Consensus 6 ~r~~rILiVdD~~~~~~~---l~~~L~~~G-~~v~~~a----------------------------------~~g~eAl~ 47 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIAML---IEDTLCELG-HEVAATA----------------------------------SRMQEALD 47 (123)
T ss_dssp CCCCCEEEESSSTTTSHH---HHHHHHHHC-CCCCBCS----------------------------------CCHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHH---HHHHHHHCC-CEEEEEE----------------------------------CCHHHHHH
Confidence 356899999998665543 455566667 3432111 12223322
Q ss_pred HhhhcccCCCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeee
Q 023840 92 LGVSQALFPSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (276)
Q Consensus 92 ~al~~~l~~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~ 145 (276)
+. -..+||||+.=+|...-.|..+ +.+-..+++|.|.+|..
T Consensus 48 ~~-----~~~~~DlvllDi~mP~~~G~el--------~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 48 IA-----RKGQFDIAIIDVNLDGEPSYPV--------ADILAERNVPFIFATGY 88 (123)
T ss_dssp HH-----HHCCSSEEEECSSSSSCCSHHH--------HHHHHHTCCSSCCBCTT
T ss_pred HH-----HhCCCCEEEEecCCCCCCHHHH--------HHHHHcCCCCEEEEecC
Confidence 22 2247999999999976666542 22333478999999863
No 57
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=34.34 E-value=20 Score=29.53 Aligned_cols=43 Identities=16% Similarity=0.284 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCCc
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qSg 56 (276)
+..+|||. ||.+++-+ +++..+.|++.|..+|.++++....++
T Consensus 97 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 140 (185)
T 2geb_A 97 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 140 (185)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCc
Confidence 44678888 99998744 778889999998777888887754444
No 58
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=34.33 E-value=23 Score=32.71 Aligned_cols=41 Identities=10% Similarity=0.038 Sum_probs=28.9
Q ss_pred CCCCCeEEEecCCCCC---CcC---HHHHHHHHHhcCCccEEEEeeCC
Q 023840 11 SDHKPTIMVTNDDGID---APG---LRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 11 ~~~~~~ILlTNDDGi~---spG---i~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
..++|||++.-+.=.. +-| +..|+++|.+.| |+|.|++|..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~G-heV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKK-FKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTT-CEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcC-CceEEEEecC
Confidence 3678999887754111 122 556777888888 8999999974
No 59
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=32.94 E-value=60 Score=27.47 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=24.0
Q ss_pred CCeEEEecCCCCCCcCH--HHHHHHHHhcCCccEEEEeeCC
Q 023840 14 KPTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 14 ~~~ILlTNDDGi~spGi--~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
.|+|||| | + |. ++|++.|.+.| ++|+++.-..
T Consensus 3 ~~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIA---G--C-GDLGLELARRLTAQG-HEVTGLRRSA 36 (286)
T ss_dssp CCCEEEE---C--C-SHHHHHHHHHHHHTT-CCEEEEECTT
T ss_pred CCcEEEE---C--C-CHHHHHHHHHHHHCC-CEEEEEeCCc
Confidence 4789999 7 3 43 45888898888 7998886543
No 60
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=32.89 E-value=32 Score=29.31 Aligned_cols=42 Identities=17% Similarity=0.291 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qS 55 (276)
+..+|||. ||.+++-+ ++++.+.|++.|..+|.++++..-++
T Consensus 125 ~gk~VliV-DDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 125 TGKNVLIV-EDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp TTSEEEEE-EEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-eceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 34578888 99999744 78888999998866787777754333
No 61
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=32.19 E-value=27 Score=30.04 Aligned_cols=43 Identities=9% Similarity=0.187 Sum_probs=33.0
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCCc
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qSg 56 (276)
+..+|||. ||.+++-+ ++++.+.|++.|-.+|.++++..-.++
T Consensus 102 ~Gk~VLLV-DDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 102 EGHHVLIV-EDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREG 145 (220)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTC
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 45678888 99998743 788999999998778888887755443
No 62
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=31.98 E-value=30 Score=29.64 Aligned_cols=42 Identities=7% Similarity=0.216 Sum_probs=31.8
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qS 55 (276)
+..+|||. ||.+++-+ ++++.+.|++.|-.+|.++++..-++
T Consensus 133 ~Gk~VllV-DDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 133 AGKNVLIV-EDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 34578888 99998744 77889999999866788887755333
No 63
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=31.90 E-value=31 Score=28.22 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=31.6
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKS 55 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qS 55 (276)
+..+|||. ||.+++-+ ++++.+.|++.|...|.+++....+.
T Consensus 94 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 94 EGRHVLVV-EDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred CCCEEEEE-CCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 44578888 99998744 77889999999866787887655433
No 64
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=31.77 E-value=31 Score=29.26 Aligned_cols=43 Identities=19% Similarity=0.293 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCCc
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qSg 56 (276)
+..+|||. ||.+++-+ ++++.+.|++.|-.+|.++++..-.++
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 117 ENRHIMLV-EDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCCEEEEE-CCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 45678888 99998744 788999999998667888887654443
No 65
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=31.61 E-value=45 Score=28.05 Aligned_cols=48 Identities=19% Similarity=0.146 Sum_probs=28.9
Q ss_pred hHHHHHHHHHcCCCEEEEeeecC-CCCCCCcccH----HHHHHHHHHHHHHHH
Q 023840 125 TVAGAREAFFHGVPSVSISYDWV-GGKSNVNDYT----LAAEACLPIINAILA 172 (276)
Q Consensus 125 TVgAA~Ea~~~GiPaIAvS~~~~-~~~~~~~~~~----~aa~~~~~li~~l~~ 172 (276)
+.+-|.-|..+|+|.+++..-.. .+.....+|+ .|++.+.+++.++++
T Consensus 176 ~aa~a~~a~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~ 228 (231)
T 3dp9_A 176 ASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFLPLAAKSSSAMVLKMVE 228 (231)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 46666677789999999985221 1111223343 356666677766664
No 66
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=31.44 E-value=24 Score=29.59 Aligned_cols=43 Identities=16% Similarity=0.284 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCCc
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qSg 56 (276)
+..+|||. ||.+++-+ +++..+.|++.|..+|.++++.....+
T Consensus 117 ~gk~VllV-DDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 160 (205)
T 1yfz_A 117 EGKDVLIV-EDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPER 160 (205)
T ss_dssp TTSEEEEE-EEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CcCEEEEE-CCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 44678888 99998744 778899999998777888887754443
No 67
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=30.97 E-value=41 Score=30.66 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=24.8
Q ss_pred cCCCCCCeEEEecCCCCC--CcC-HHHHHHHHHhcCCccEEEE
Q 023840 9 VNSDHKPTIMVTNDDGID--APG-LRSLVRVLVSTNRYTVQVC 48 (276)
Q Consensus 9 m~~~~~~~ILlTNDDGi~--spG-i~aL~~aL~~~g~~~V~VV 48 (276)
|+..++||||+.++.++. .+| ...+++.|++.| +|.|+
T Consensus 9 ~~~~~~MkIl~is~~~~p~~~~~~~~~l~~~l~~~G--~V~vi 49 (406)
T 2hy7_A 9 ASGIRRPCYLVLSSHDFRTPRRANIHFITDQLALRG--TTRFF 49 (406)
T ss_dssp ----CCSCEEEEESSCTTSSSCCHHHHHHHHHHHHS--CEEEE
T ss_pred CCCCCCceEEEEecccCCChhhhhHhHHHHHHHhCC--ceEEE
Confidence 555677999988876443 112 356788888887 99999
No 68
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=30.34 E-value=64 Score=27.08 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=28.4
Q ss_pred hHHHHHHHHHcCCCEEEEeeec-CCCCCCCcccH----HHHHHHHHHHHHHHH
Q 023840 125 TVAGAREAFFHGVPSVSISYDW-VGGKSNVNDYT----LAAEACLPIINAILA 172 (276)
Q Consensus 125 TVgAA~Ea~~~GiPaIAvS~~~-~~~~~~~~~~~----~aa~~~~~li~~l~~ 172 (276)
+.+-|.-|..+|+|.+++..-. ..+.....+|+ .|++.+.+++.++++
T Consensus 179 ~aa~a~~a~~~gip~~~ir~IsD~a~~~~~~~~~~~~~~aa~~~~~~v~~~l~ 231 (233)
T 3eei_A 179 AAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTAAANSAKMVAEIVK 231 (233)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5666667778999999998522 11122223444 355556666666654
No 69
>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} SCOP: c.141.1.1
Probab=29.75 E-value=90 Score=29.40 Aligned_cols=42 Identities=31% Similarity=0.299 Sum_probs=28.6
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeee
Q 023840 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (276)
Q Consensus 101 ~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~ 145 (276)
+.-||||.| +|.--.....=.-.+|-|+.|.. |+|.|+++-.
T Consensus 277 ~~ADLVITG--EG~~D~QT~~GK~p~gVa~~A~~-~~PviaiaG~ 318 (371)
T 1to6_A 277 SDVDLVIVG--EGRLDRQSLAGKAPIGVAKRTPV-GVPVVAICGS 318 (371)
T ss_dssp TTCSEEEEC--CSEECSTTTTTCHHHHHHTTSCT-TCCEEEEESE
T ss_pred cCCCEEEEC--CCCCCCCCCCCcHHHHHHHHHhc-CCCEEEEeCC
Confidence 367999998 34433333333445677888877 9999999854
No 70
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=29.54 E-value=91 Score=26.12 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=31.3
Q ss_pred hHHHHHHHHHcCCCEEEEeeecC-CCCCCCccc----HHHHHHHHHHHHHHHHHHH
Q 023840 125 TVAGAREAFFHGVPSVSISYDWV-GGKSNVNDY----TLAAEACLPIINAILAEIR 175 (276)
Q Consensus 125 TVgAA~Ea~~~GiPaIAvS~~~~-~~~~~~~~~----~~aa~~~~~li~~l~~~~~ 175 (276)
+.+-|.-|..+|+|.+++..-.. .+.....+| +.|++.+.+++.++++.+.
T Consensus 177 ~aa~a~va~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~~aa~~~a~~v~~~l~~l~ 232 (234)
T 3o4v_A 177 ATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLA 232 (234)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEEecCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56666677789999999986221 111222234 4466667777777776543
No 71
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=29.34 E-value=13 Score=32.58 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=24.4
Q ss_pred CCCCeEEEecCCCC-CCcC----HHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 12 DHKPTIMVTNDDGI-DAPG----LRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 12 ~~~~~ILlTNDDGi-~spG----i~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
+.+||||+..+.=. ..-| +..|+++| .| |+|.|+++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g-~~v~v~~~~~~~ 46 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DP-ESIVVFASTQNA 46 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CG-GGEEEEEECSSH
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cC-CeEEEEECCCCc
Confidence 45688888766322 2234 44455555 25 899999997643
No 72
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=28.80 E-value=35 Score=29.61 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEE
Q 023840 13 HKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQV 47 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~V 47 (276)
.+..|.||=|||+.+.+...+.+.|++.|. ..+.
T Consensus 24 ~~k~VaLTFDDG~~~~~t~~il~iL~~~~v-~ATF 57 (254)
T 2vyo_A 24 NSGMIAINFVDGPVRGVTDRILNTLDELGV-KATF 57 (254)
T ss_dssp SSSEEEEEEESCCCTTHHHHHHHHHHHHTC-CCEE
T ss_pred CCCEEEEEEeCCCCcccHHHHHHHHHHcCC-CEEE
Confidence 456799999999998888899999999884 4444
No 73
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=28.67 E-value=38 Score=24.98 Aligned_cols=30 Identities=17% Similarity=0.355 Sum_probs=15.1
Q ss_pred cCCCCCCeEEEecCCCCCCcCHHHHHHHHHhcC
Q 023840 9 VNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (276)
Q Consensus 9 m~~~~~~~ILlTNDDGi~spGi~aL~~aL~~~g 41 (276)
|.....++|||..||-... ..|.+.|++.|
T Consensus 1 M~~~~~~~ilivdd~~~~~---~~l~~~L~~~g 30 (136)
T 3kto_A 1 MSLNHHPIIYLVDHQKDAR---AALSKLLSPLD 30 (136)
T ss_dssp ------CEEEEECSCHHHH---HHHHHHHTTSS
T ss_pred CCCCCCCeEEEEcCCHHHH---HHHHHHHHHCC
Confidence 4445568999998884332 33445555545
No 74
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.46 E-value=44 Score=24.18 Aligned_cols=40 Identities=25% Similarity=0.245 Sum_probs=21.3
Q ss_pred CCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeee
Q 023840 100 PSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (276)
Q Consensus 100 ~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~ 145 (276)
..+||+||..++.....|.+++ .........+|.|.+|..
T Consensus 49 ~~~~dlvi~d~~l~~~~g~~~~------~~l~~~~~~~~ii~~t~~ 88 (130)
T 3eod_A 49 GFTPDLMICDIAMPRMNGLKLL------EHIRNRGDQTPVLVISAT 88 (130)
T ss_dssp TCCCSEEEECCC-----CHHHH------HHHHHTTCCCCEEEEECC
T ss_pred cCCCCEEEEecCCCCCCHHHHH------HHHHhcCCCCCEEEEEcC
Confidence 3469999998887654443221 122223457888888853
No 75
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=28.01 E-value=1.8e+02 Score=24.87 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=31.5
Q ss_pred hHHHHHHHHHcCCCEEEEee--ecCCCCC-CCccc----HHHHHHHHHHHHHHHHHHHhC
Q 023840 125 TVAGAREAFFHGVPSVSISY--DWVGGKS-NVNDY----TLAAEACLPIINAILAEIRNQ 177 (276)
Q Consensus 125 TVgAA~Ea~~~GiPaIAvS~--~~~~~~~-~~~~~----~~aa~~~~~li~~l~~~~~~~ 177 (276)
+.+-|.-|..+|+|.+++.. ++..+.. +..+| +.|++.+.+++.++++.+..+
T Consensus 190 ~aa~a~va~~~~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~~ 249 (254)
T 3bsf_A 190 GAAVAYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISGK 249 (254)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 55666677789999999975 2222111 12233 455666667777777665443
No 76
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=28.01 E-value=39 Score=29.15 Aligned_cols=43 Identities=9% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCCCc
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEKSA 56 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~qSg 56 (276)
+..+|||. ||.+++-+ ++++.+.|++.|-..|.++++..-+++
T Consensus 141 ~Gk~VLIV-DDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 141 RDKHVLIV-EDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD 184 (233)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT
T ss_pred CCCEEEEE-ccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 34578888 99998744 788999999998667777777654443
No 77
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=27.93 E-value=59 Score=28.16 Aligned_cols=34 Identities=6% Similarity=0.045 Sum_probs=27.1
Q ss_pred CCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCC
Q 023840 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 14 ~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
+|+|||.... --+.+++++++.| ++|+++.|..+
T Consensus 2 ~m~Ililg~g-----~~~~l~~a~~~~G-~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH-----SALQILKGAKDEG-FETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST-----THHHHHHHHHHTT-CCEEEESCGGG
T ss_pred ceEEEEECCh-----hHHHHHHHHHhCC-CEEEEEECCCC
Confidence 4789999765 3567899999999 79999988753
No 78
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=27.88 E-value=23 Score=32.53 Aligned_cols=62 Identities=16% Similarity=0.212 Sum_probs=0.0
Q ss_pred CccccccccCCCCCCeEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCCC------------------CcCccccc
Q 023840 1 MERRGIAIVNSDHKPTIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK------------------SAVSHSIT 62 (276)
Q Consensus 1 ~~~~~~~~m~~~~~~~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~q------------------Sg~g~sit 62 (276)
+++++- |..+++.-||+. ||...--+...++.|+++| ++|.+++|.... +..|..+.
T Consensus 3 ~~~~~~--m~~~~kv~ill~--dg~e~~E~~~~~~~l~~ag-~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~ 77 (396)
T 3uk7_A 3 QMGRGS--MANSRTVLILCG--DYMEDYEVMVPFQALQAFG-ITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFT 77 (396)
T ss_dssp ----------CCCEEEEECC--TTEEHHHHHHHHHHHHHTT-CEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEE
T ss_pred chhhhh--hhcCCeEEEEeC--CCccHHHHHHHHHHHHHCC-CEEEEEcCCCcCCCcccccccccccchhhhhccCceee
Q ss_pred CCCCe
Q 023840 63 WRHPI 67 (276)
Q Consensus 63 ~~~pl 67 (276)
....+
T Consensus 78 ~~~~~ 82 (396)
T 3uk7_A 78 LNATF 82 (396)
T ss_dssp CCSCG
T ss_pred ccCCh
No 79
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=27.58 E-value=34 Score=29.35 Aligned_cols=30 Identities=7% Similarity=0.104 Sum_probs=24.3
Q ss_pred CCCCCcCHHHHHHHHHhcCCccEEEEeeCCC
Q 023840 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 23 DGi~spGi~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
||+.-.-+-..++.|+++| ++|.+++|...
T Consensus 24 ~G~~~~E~~~p~~vl~~ag-~~v~~~s~~g~ 53 (243)
T 1rw7_A 24 TGVFVVEALHPFNTFRKEG-FEVDFVSETGK 53 (243)
T ss_dssp CCBCHHHHHHHHHHHHHTT-CEEEEECSSSC
T ss_pred CccCHHHHHHHHHHHHHCC-CEEEEECCCCC
Confidence 5666566777899999999 79999999864
No 80
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=27.04 E-value=56 Score=30.85 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=27.9
Q ss_pred cCCCCCCeEEEecCCCCCCcC----HHHHHHHHHhc-CCccEEEEeeCCC
Q 023840 9 VNSDHKPTIMVTNDDGIDAPG----LRSLVRVLVST-NRYTVQVCAPDSE 53 (276)
Q Consensus 9 m~~~~~~~ILlTNDDGi~spG----i~aL~~aL~~~-g~~~V~VVAP~~~ 53 (276)
|+.+++++|++.- +.+.| +..|++.|.+. | |+|+++.+..+
T Consensus 1 M~~~~~~~vl~~p---~p~~GHv~P~l~La~~L~~r~G-h~Vt~~t~~~~ 46 (480)
T 2vch_A 1 MEESKTPHVAIIP---SPGMGHLIPLVEFAKRLVHLHG-LTVTFVIAGEG 46 (480)
T ss_dssp -----CCEEEEEC---CSCHHHHHHHHHHHHHHHHHHC-CEEEEEECCSS
T ss_pred CCCCCCcEEEEec---CcchhHHHHHHHHHHHHHhCCC-CEEEEEECCCc
Confidence 5556678888873 44433 67799999987 9 89999988874
No 81
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=26.66 E-value=36 Score=26.68 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=23.9
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccE
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTV 45 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V 45 (276)
+..+|||. ||.+++-+ +.++.+.|++.|...|
T Consensus 82 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~ga~~v 114 (153)
T 1vdm_A 82 KDKRVVIV-DDVSDTGKTLEVVIEEVKKLGAKEI 114 (153)
T ss_dssp BTCEEEEE-EEEESSCHHHHHHHHHHHTTTBSEE
T ss_pred CCCEEEEE-ecccCChHHHHHHHHHHHHcCCCEE
Confidence 34578888 99888643 6788899999885455
No 82
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=26.20 E-value=61 Score=28.18 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=25.8
Q ss_pred CCCCCcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 23 DGi~spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
||..---+-..+++|+++| ++|.+++|...+
T Consensus 37 dG~e~~E~~~p~~vL~~aG-~~V~~~S~~~g~ 67 (242)
T 3l3b_A 37 DGSEIREAVLVMLELDRHN-VNFKCFAPNKNQ 67 (242)
T ss_dssp TSCCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred CCeeHHHHHHHHHHHHHCC-CEEEEEecCCCc
Confidence 5677666778899999999 799999998754
No 83
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=26.16 E-value=71 Score=26.86 Aligned_cols=29 Identities=24% Similarity=0.387 Sum_probs=22.8
Q ss_pred CeEEEecCCCCCCcCH--HHHHHHHHhcCCccEEEEee
Q 023840 15 PTIMVTNDDGIDAPGL--RSLVRVLVSTNRYTVQVCAP 50 (276)
Q Consensus 15 ~~ILlTNDDGi~spGi--~aL~~aL~~~g~~~V~VVAP 50 (276)
|+|||| | + |. +.|+++|.+.| |+|+++.-
T Consensus 6 ~~ilVt---G--a-G~iG~~l~~~L~~~g-~~V~~~~r 36 (286)
T 3ius_A 6 GTLLSF---G--H-GYTARVLSRALAPQG-WRIIGTSR 36 (286)
T ss_dssp CEEEEE---T--C-CHHHHHHHHHHGGGT-CEEEEEES
T ss_pred CcEEEE---C--C-cHHHHHHHHHHHHCC-CEEEEEEc
Confidence 789999 6 4 54 56889998888 78888754
No 84
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=25.77 E-value=61 Score=23.73 Aligned_cols=40 Identities=15% Similarity=0.269 Sum_probs=23.2
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHH-HHcCCCEEEEeee
Q 023840 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREA-FFHGVPSVSISYD 145 (276)
Q Consensus 101 ~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea-~~~GiPaIAvS~~ 145 (276)
.+||+||..++.....|.++ +-..++. ....+|.|.+|..
T Consensus 50 ~~~dlii~d~~l~~~~g~~~-----~~~l~~~~~~~~~pii~~s~~ 90 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWDT-----IRAILDNSLEQGIAIVMLTAK 90 (142)
T ss_dssp CCCEEEEEESCCSSSCHHHH-----HHHHHHTTCCTTEEEEEEECT
T ss_pred cCCCEEEEeCCCCCCCHHHH-----HHHHHhhcccCCCCEEEEECC
Confidence 36999999988764333221 1111111 2356899999864
No 85
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=25.34 E-value=55 Score=24.77 Aligned_cols=41 Identities=22% Similarity=0.325 Sum_probs=24.0
Q ss_pred CCCCcEEEecCCCCCCCccccccchhHHHHHHHH-HcCCCEEEEeee
Q 023840 100 PSVPDLVISGINMGSNCGYHVVYSGTVAGAREAF-FHGVPSVSISYD 145 (276)
Q Consensus 100 ~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~-~~GiPaIAvS~~ 145 (276)
..+||+||..++...-.|.+++ ...++.. ...+|.|.+|..
T Consensus 49 ~~~~dlii~D~~l~~~~g~~~~-----~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 49 LTRPDLIISDVLMPEMDGYALC-----RWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp TCCCSEEEEESCCSSSCHHHHH-----HHHHHSTTTTTSCEEEEECC
T ss_pred hCCCCEEEEeCCCCCCCHHHHH-----HHHHhCCCcCCCCEEEEECC
Confidence 3479999999987654333221 1111111 257899998853
No 86
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=25.28 E-value=1.4e+02 Score=24.05 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=28.5
Q ss_pred eEEEecCCCCCCcCHHHHHHHHHh-cCCccEEEEeeCCC
Q 023840 16 TIMVTNDDGIDAPGLRSLVRVLVS-TNRYTVQVCAPDSE 53 (276)
Q Consensus 16 ~ILlTNDDGi~spGi~aL~~aL~~-~g~~~V~VVAP~~~ 53 (276)
+|++-=-||..-.-+-..++.|++ .| ++|.+++|...
T Consensus 3 ~i~ill~~g~~~~e~~~~~~~l~~a~~-~~v~~vs~~~~ 40 (188)
T 2fex_A 3 RIAIALAQDFADWEPALLAAAARSYLG-VEIVHATPDGM 40 (188)
T ss_dssp EEEEECCTTBCTTSSHHHHHHHHHHSC-CEEEEEETTSS
T ss_pred EEEEEeCCCchHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 444444478887777788999988 77 69999999864
No 87
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=25.13 E-value=77 Score=28.16 Aligned_cols=44 Identities=23% Similarity=0.218 Sum_probs=37.5
Q ss_pred CCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeee
Q 023840 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (276)
Q Consensus 102 ~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~ 145 (276)
+.|.|+.|-+.=.--|.-+...||...|+-|..+|+|.+.+.-.
T Consensus 177 ~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~ 220 (276)
T 1vb5_A 177 EASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAET 220 (276)
T ss_dssp TCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCG
T ss_pred cCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccc
Confidence 69999999887665666666799999999999999999998643
No 88
>2lw6_A Avrpiz-T protein; plant resistance gene, avirulence protein, protein degradation, apoptosis; NMR {Magnaporthe oryzae}
Probab=24.85 E-value=11 Score=27.28 Aligned_cols=34 Identities=29% Similarity=0.535 Sum_probs=20.4
Q ss_pred EecCChHHHHHHhhhcccCCCCCcEEEecCCCCCCCc--cccccchhHH
Q 023840 81 AVSGTPADCASLGVSQALFPSVPDLVISGINMGSNCG--YHVVYSGTVA 127 (276)
Q Consensus 81 ~v~GTPaDcV~~al~~~l~~~~PDLVVSGIN~G~N~G--~~v~ySGTVg 127 (276)
--+.+|+-|-.+-.. -.-.|...| +|++.|||||
T Consensus 44 cknaspvhcnylkct-------------nlaagfsagtstdvlssgtvg 79 (80)
T 2lw6_A 44 CKNASPVHCNYLKCT-------------NLAAGFSAGTSTDVLSSGTVG 79 (80)
T ss_dssp EEESCSSSCCCEEEE-------------SCBTTBEECCCCTTTTCSCSC
T ss_pred hcCCCccccceeeec-------------chhhhccCCcccceecccccC
Confidence 347888877333222 222344444 6899999997
No 89
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=24.71 E-value=1.1e+02 Score=25.94 Aligned_cols=35 Identities=6% Similarity=0.128 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCC-CcCH-HHHHHHHHhcCCccEEEEeeC
Q 023840 13 HKPTIMVTNDDGID-APGL-RSLVRVLVSTNRYTVQVCAPD 51 (276)
Q Consensus 13 ~~~~ILlTNDDGi~-spGi-~aL~~aL~~~g~~~V~VVAP~ 51 (276)
+..++||| |-. +-|| +++++.|.+.| ++|+++.-.
T Consensus 5 ~~k~vlVT---Gas~~~gIG~~~a~~l~~~G-~~V~~~~r~ 41 (275)
T 2pd4_A 5 KGKKGLIV---GVANNKSIAYGIAQSCFNQG-ATLAFTYLN 41 (275)
T ss_dssp TTCEEEEE---CCCSTTSHHHHHHHHHHTTT-CEEEEEESS
T ss_pred CCCEEEEE---CCCCCCcHHHHHHHHHHHCC-CEEEEEeCC
Confidence 45679999 332 1455 57899999999 788888644
No 90
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=24.70 E-value=60 Score=29.48 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEe
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVA 49 (276)
+..++||. ||.+++-+ +.+.+++|+++|..+|.+++
T Consensus 216 ~gk~VlLV-DDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 216 EGKTAILI-DDIIDTAGTITLAANALVENGAKEVYACC 252 (317)
T ss_dssp TTCEEEEE-CSEESSCHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEE-ecccCCCHHHHHHHHHHHHcCCcEEEEEE
Confidence 34577777 99998754 67789999999977788887
No 91
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=24.69 E-value=47 Score=26.92 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=29.7
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcC-CccEEEEeeCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTN-RYTVQVCAPDS 52 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g-~~~V~VVAP~~ 52 (276)
+..+|||. ||.+++-+ ++++.+.|++.| ...|.++++..
T Consensus 97 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~ 137 (181)
T 1a3c_A 97 TDQKVILV-DDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVD 137 (181)
T ss_dssp TTSEEEEE-EEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred CCCEEEEE-eCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEc
Confidence 44578888 99888633 778889999986 66787777763
No 92
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=24.67 E-value=62 Score=23.56 Aligned_cols=27 Identities=22% Similarity=0.513 Sum_probs=16.3
Q ss_pred CCCCeEEEecCCCCCCcCHHHHHHHHHhcC
Q 023840 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spGi~aL~~aL~~~g 41 (276)
...++|||..||-... ..|.+.|++.|
T Consensus 5 ~~~~~ilivdd~~~~~---~~l~~~L~~~g 31 (136)
T 3hdv_A 5 AARPLVLVVDDNAVNR---EALILYLKSRG 31 (136)
T ss_dssp --CCEEEEECSCHHHH---HHHHHHHHHTT
T ss_pred CCCCeEEEECCCHHHH---HHHHHHHHHcC
Confidence 3467899999885433 34455566555
No 93
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=24.43 E-value=47 Score=26.65 Aligned_cols=34 Identities=9% Similarity=0.243 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEE
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQV 47 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~V 47 (276)
+..+|||. ||.+++-+ ++++.+.|+++|...|.+
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~V~~ 153 (175)
T 1vch_A 119 LNQRVVLV-SDVVASGETMRAMEKMVLRAGGHVVAR 153 (175)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEE-eccccchHHHHHHHHHHHHcCCeEEEE
Confidence 45678888 99888633 678899999998544533
No 94
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.15 E-value=70 Score=23.96 Aligned_cols=39 Identities=23% Similarity=0.153 Sum_probs=21.7
Q ss_pred CCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeee
Q 023840 101 SVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYD 145 (276)
Q Consensus 101 ~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~ 145 (276)
.+||+||..++...-.|.+ +-..+......+|.|.+|..
T Consensus 50 ~~~dlvi~d~~l~~~~g~~------~~~~l~~~~~~~~ii~ls~~ 88 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEV------FLEQVAKSYPDIERVVISGY 88 (154)
T ss_dssp SCCSEEEEESSCSSSCHHH------HHHHHHHHCTTSEEEEEECG
T ss_pred CCCCEEEEecCCCCCCHHH------HHHHHHHhCCCCcEEEEecC
Confidence 4689999888765432221 11122223346788888753
No 95
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=23.98 E-value=54 Score=27.78 Aligned_cols=42 Identities=14% Similarity=-0.009 Sum_probs=36.6
Q ss_pred CcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEee
Q 023840 103 PDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY 144 (276)
Q Consensus 103 PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~ 144 (276)
.|.||.|-..=.--|.-+.-.||...|+-|-.+|||-+.++-
T Consensus 52 Vd~VivGAd~v~~nG~v~nkiGT~~~Al~Ak~~~vPf~V~a~ 93 (191)
T 1w2w_B 52 IKAAFVGADRIVRNGDTANKIGTLQLAVICKQFGIKFFVVAP 93 (191)
T ss_dssp EEEEEECCSEECTTSCEEEETTHHHHHHHHHHHTCEEEEECC
T ss_pred CCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCEEEecc
Confidence 899999987766667777889999999999999999999864
No 96
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=23.97 E-value=53 Score=31.65 Aligned_cols=40 Identities=18% Similarity=0.314 Sum_probs=28.3
Q ss_pred CCCeEEEecCC-CC--CCcC----HHHHHHHHHhcCCccEEEEeeCCC
Q 023840 13 HKPTIMVTNDD-GI--DAPG----LRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 13 ~~~~ILlTNDD-Gi--~spG----i~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
.+||||..--- -. .+-| ..+|-++|++.| |+|.|+.|.-.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G-~~V~Vi~P~Y~ 54 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANG-HRVMVISPRYD 54 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTT-CEEEEEEECCS
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcC-CeEEEEecCch
Confidence 57999977311 00 1224 367999999999 89999999764
No 97
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=23.74 E-value=29 Score=28.70 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=28.0
Q ss_pred EEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCC
Q 023840 17 IMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 17 ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
|+|-=.||++--=+..-++.|+++| ++|.++.|...
T Consensus 11 v~il~~~gFe~~E~~~p~~~l~~ag-~~V~~~s~~~~ 46 (177)
T 4hcj_A 11 LYVMSGQNFQDEEYFESKKIFESAG-YKTKVSSTFIG 46 (177)
T ss_dssp EEECCSEEECHHHHHHHHHHHHHTT-CEEEEEESSSE
T ss_pred EEEECCCCccHHHHHHHHHHHHHCC-CEEEEEECCCC
Confidence 4444467887767778899999999 79999998653
No 98
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=23.06 E-value=1.8e+02 Score=24.21 Aligned_cols=67 Identities=21% Similarity=0.032 Sum_probs=44.5
Q ss_pred cEEEe--cCCCCCCCccccccchhHHHHHHHHHcCCCEEEEeeecCCCCCCCcccHHHHHHHHHHHHHHHH
Q 023840 104 DLVIS--GINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDYTLAAEACLPIINAILA 172 (276)
Q Consensus 104 DLVVS--GIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~~~aa~~~~~li~~l~~ 172 (276)
..||- ||..+.+.....+++..-.+-..|..+|+.+|||-.=. .+ ....+++.+++.+.+-++.++.
T Consensus 95 k~VIH~vgP~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~Is-tG-~~g~p~~~aa~i~~~~v~~~l~ 163 (193)
T 2xd7_A 95 KFVIHCHIPQWGSDKCEEQLEETIKNCLSAAEDKKLKSVAFPPFP-SG-RNCFPKQTAAQVTLKAISAHFD 163 (193)
T ss_dssp SEEEEEECCCTTSTTHHHHHHHHHHHHHHHHHHTTCSEEEECCCC-CS-TTCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcCCCcchHHHHHHHHHHHHHHHHHcCCCEEEecccc-CC-CCCCCHHHHHHHHHHHHHHHHH
Confidence 45544 78776553345778877777777888999999997421 11 1234678888887766666553
No 99
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=22.95 E-value=58 Score=27.89 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=26.2
Q ss_pred CCCCeEEEecCCCCCCcCHHHHHHHHHhcCC
Q 023840 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spGi~aL~~aL~~~g~ 42 (276)
..+..|.||=|||+.+.....+.+.|++.+.
T Consensus 40 ~~~k~V~LTFDDG~~~~~t~~il~iL~~~~v 70 (240)
T 1ny1_A 40 TKEKTIYLTFDNGYENGYTPKVLDVLKKHRV 70 (240)
T ss_dssp TTSSEEEEEEEESSCCSCHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3456799999999998788889999999874
No 100
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=22.76 E-value=71 Score=32.57 Aligned_cols=38 Identities=16% Similarity=0.013 Sum_probs=28.3
Q ss_pred CeEEEecCCC-CCCcCHHHHHHHHHhcCCccEEEEeeCCC
Q 023840 15 PTIMVTNDDG-IDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 15 ~~ILlTNDDG-i~spGi~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
.+|.|-=.|| .+..-+..++++|+++| .+|.||+|...
T Consensus 538 rKVaILvadG~fE~~El~~p~~aL~~aG-a~V~vVsp~~g 576 (688)
T 3ej6_A 538 LRVGVLSTTKGGSLDKAKALKEQLEKDG-LKVTVIAEYLA 576 (688)
T ss_dssp CEEEEECCSSSSHHHHHHHHHHHHHHTT-CEEEEEESSCC
T ss_pred CEEEEEccCCCccHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 3443333456 55558899999999999 79999999764
No 101
>4fay_A Microcompartments protein; BMC domain, shell protein, glycerol-binding protein; 1.56A {Lactobacillus reuteri}
Probab=22.61 E-value=33 Score=30.91 Aligned_cols=52 Identities=15% Similarity=0.262 Sum_probs=42.3
Q ss_pred ecCChHHHHHHhhhcccCCCCCcEE-EecCCCCCCCccc--cccchhHHHHHHHH
Q 023840 82 VSGTPADCASLGVSQALFPSVPDLV-ISGINMGSNCGYH--VVYSGTVAGAREAF 133 (276)
Q Consensus 82 v~GTPaDcV~~al~~~l~~~~PDLV-VSGIN~G~N~G~~--v~ySGTVgAA~Ea~ 133 (276)
+-+.|+-...++.|..+.-...||| +..|..|.|.|-- ++.+|.+||.++|.
T Consensus 177 ie~~p~a~givaaD~AlKAA~V~lv~~~~P~~gt~~ggk~~~~lTGd~sAVkaAv 231 (258)
T 4fay_A 177 ICGCPSGIGVVMGDKALKTAGVEPLNFTSPSHGTSFSNEGCLTITGDSGAVRQAV 231 (258)
T ss_dssp EEEESHHHHHHHHHHHHHHSCCEEEEEEBTTBSSSSCSCEEEEEESCHHHHHHHH
T ss_pred EEcCcHHHHHHHHHHHHhhCCeEEEEEEcCCCCccccceEEEEEEeCHHHHHHHH
Confidence 5688998888888876654578887 5889999999853 68899999999886
No 102
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=22.53 E-value=56 Score=26.87 Aligned_cols=39 Identities=10% Similarity=0.134 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
+..+|||. ||-+++-+ ++++++.|+++|...|.+++...
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~ 158 (197)
T 1y0b_A 119 DQDHVLII-DDFLANGQAAHGLVSIVKQAGASIAGIGIVIE 158 (197)
T ss_dssp TTCEEEEE-EEEESSCHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CcCEEEEE-EcccccCHHHHHHHHHHHHCCCEEEEEEEEEE
Confidence 45678888 99888633 88899999999965565555544
No 103
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=22.29 E-value=73 Score=29.18 Aligned_cols=43 Identities=26% Similarity=0.084 Sum_probs=37.5
Q ss_pred CCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEEee
Q 023840 102 VPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSISY 144 (276)
Q Consensus 102 ~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAvS~ 144 (276)
+.|.||.|-..=.--|.-+.-.||...|+-|..+|+|-+.++-
T Consensus 189 ~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~ 231 (315)
T 3ecs_A 189 KADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAE 231 (315)
T ss_dssp GCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECC
T ss_pred hCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEec
Confidence 6899999988766567778889999999999999999998864
No 104
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=22.28 E-value=84 Score=25.92 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=29.3
Q ss_pred eEEEecCCCCCCcCHHHHHHHHHhcCCccEEEEeeCCC
Q 023840 16 TIMVTNDDGIDAPGLRSLVRVLVSTNRYTVQVCAPDSE 53 (276)
Q Consensus 16 ~ILlTNDDGi~spGi~aL~~aL~~~g~~~V~VVAP~~~ 53 (276)
+|++-=-||..-..+...++.|+.+| ++|.+++|...
T Consensus 4 kV~ill~~g~~~~e~~~~~~~l~~ag-~~v~~vs~~~~ 40 (205)
T 2ab0_A 4 SALVCLAPGSEETEAVTTIDLLVRGG-IKVTTASVASD 40 (205)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTT-CEEEEEECSST
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 44333347888888889999999999 69999999875
No 105
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=22.26 E-value=63 Score=23.88 Aligned_cols=27 Identities=11% Similarity=0.026 Sum_probs=16.3
Q ss_pred CCCCeEEEecCCCCCCcCHHHHHHHHHhcC
Q 023840 12 DHKPTIMVTNDDGIDAPGLRSLVRVLVSTN 41 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spGi~aL~~aL~~~g 41 (276)
...++|||..||-..... |.+.|++.|
T Consensus 6 ~~~~~iLivd~~~~~~~~---l~~~L~~~g 32 (147)
T 2zay_A 6 GKWWRIMLVDTQLPALAA---SISALSQEG 32 (147)
T ss_dssp --CEEEEEECTTGGGGHH---HHHHHHHHT
T ss_pred CCCceEEEEeCCHHHHHH---HHHHHHHcC
Confidence 456789999988554443 444555545
No 106
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=22.13 E-value=57 Score=26.77 Aligned_cols=28 Identities=25% Similarity=0.268 Sum_probs=23.6
Q ss_pred CCeEEEecCCCCCCcCHHHHHHHHHhcCC
Q 023840 14 KPTIMVTNDDGIDAPGLRSLVRVLVSTNR 42 (276)
Q Consensus 14 ~~~ILlTNDDGi~spGi~aL~~aL~~~g~ 42 (276)
+..|.||=|||+.. +...+.+.|++.+.
T Consensus 4 ~~~V~LTFDDG~~~-~~~~il~iL~~~~v 31 (195)
T 2cc0_A 4 NGYVGLTFDDGPSG-STQSLLNALRQNGL 31 (195)
T ss_dssp SEEEEEEEESCCST-THHHHHHHHHHTTC
T ss_pred CCEEEEEEcCCCch-hHHHHHHHHHHcCC
Confidence 45699999999975 48899999999874
No 107
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=22.09 E-value=2e+02 Score=23.71 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=29.3
Q ss_pred eEEEecCCCCCCcCHHHHHHHHH--------hcCCccEEEEeeCCC
Q 023840 16 TIMVTNDDGIDAPGLRSLVRVLV--------STNRYTVQVCAPDSE 53 (276)
Q Consensus 16 ~ILlTNDDGi~spGi~aL~~aL~--------~~g~~~V~VVAP~~~ 53 (276)
+|++-=-||...--+...++.|+ +.+ ++|.+++|..+
T Consensus 7 ~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~-~~v~~vs~~~~ 51 (212)
T 3efe_A 7 KAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAP-LKVITVGANKE 51 (212)
T ss_dssp CEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCC-CCEEEEESSSC
T ss_pred EEEEEECCCccHHHHHHHHHHHHhhhccccCCCC-eEEEEEECCCC
Confidence 45555567899888999999998 556 69999999754
No 108
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=22.05 E-value=1.3e+02 Score=25.37 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=25.4
Q ss_pred CCCCeEEEecCCCC-CCcCH-HHHHHHHHhcCCccEEEEee
Q 023840 12 DHKPTIMVTNDDGI-DAPGL-RSLVRVLVSTNRYTVQVCAP 50 (276)
Q Consensus 12 ~~~~~ILlTNDDGi-~spGi-~aL~~aL~~~g~~~V~VVAP 50 (276)
-+..++||| |= .+-|| +++++.|.+.| ++|+++.-
T Consensus 5 l~~k~vlVT---Ga~~s~gIG~aia~~l~~~G-~~V~~~~r 41 (269)
T 2h7i_A 5 LDGKRILVS---GIITDSSIAFHIARVAQEQG-AQLVLTGF 41 (269)
T ss_dssp TTTCEEEEC---CCSSTTSHHHHHHHHHHHTT-CEEEEEEC
T ss_pred cCCCEEEEE---CCCCCCchHHHHHHHHHHCC-CEEEEEec
Confidence 345679999 33 14566 67899999999 68888754
No 109
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=21.69 E-value=82 Score=26.61 Aligned_cols=31 Identities=16% Similarity=0.214 Sum_probs=26.5
Q ss_pred CCCCCcCHHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 23 DGIDAPGLRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 23 DGi~spGi~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
||..-.-+-..++.|+.+| ++|.+++|...+
T Consensus 20 ~g~~~~E~~~p~~~l~~ag-~~v~~~s~~g~~ 50 (232)
T 1vhq_A 20 DGSEIHEAVLTLLAISRSG-AQAVCFAPDKQQ 50 (232)
T ss_dssp TSBCHHHHHHHHHHHHHTT-CEEEEEECSSBC
T ss_pred CCeeHHHHHHHHHHHHHCC-CEEEEEecCCCC
Confidence 6888778888999999999 699999998643
No 110
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=21.56 E-value=58 Score=26.35 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=29.8
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEeeCCCC
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCAPDSEK 54 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVAP~~~q 54 (276)
+..+|||. ||.+++-+ +.+..+.|+++|...|.+++...-.
T Consensus 119 ~gk~VllV-DDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~ 160 (180)
T 1zn8_A 119 PGQRVVVV-DDLLATGGTMNAACELLGRLQAEVLECVSLVELT 160 (180)
T ss_dssp TTCEEEEE-EEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEG
T ss_pred CCCEEEEE-cCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEcc
Confidence 34578888 99888643 7888999999996566666655443
No 111
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=21.51 E-value=1.2e+02 Score=25.08 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=26.0
Q ss_pred CCCCeEEEecCCCCCCcCH-HHHHHHHHhcCCccEEEEeeCC
Q 023840 12 DHKPTIMVTNDDGIDAPGL-RSLVRVLVSTNRYTVQVCAPDS 52 (276)
Q Consensus 12 ~~~~~ILlTNDDGi~spGi-~aL~~aL~~~g~~~V~VVAP~~ 52 (276)
.+.++||||= .+-|| +++++.|.+.| ++|+++.-..
T Consensus 5 ~~~k~vlVTG----as~gIG~~ia~~l~~~G-~~V~~~~r~~ 41 (241)
T 1dhr_A 5 GEARRVLVYG----GRGALGSRCVQAFRARN-WWVASIDVVE 41 (241)
T ss_dssp -CCCEEEEET----TTSHHHHHHHHHHHTTT-CEEEEEESSC
T ss_pred CCCCEEEEEC----CCcHHHHHHHHHHHhCC-CEEEEEeCCh
Confidence 3456799993 23466 67999999999 7888886543
No 112
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=21.45 E-value=1.3e+02 Score=25.64 Aligned_cols=34 Identities=6% Similarity=0.177 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCCCC-cCH-HHHHHHHHhcCCccEEEEee
Q 023840 13 HKPTIMVTNDDGIDA-PGL-RSLVRVLVSTNRYTVQVCAP 50 (276)
Q Consensus 13 ~~~~ILlTNDDGi~s-pGi-~aL~~aL~~~g~~~V~VVAP 50 (276)
+..++||| |-.+ -|| +++++.|.+.| ++|+++.-
T Consensus 20 ~~k~vlVT---Gas~~~gIG~~ia~~l~~~G-~~V~~~~r 55 (285)
T 2p91_A 20 EGKRALIT---GVANERSIAYGIAKSFHREG-AQLAFTYA 55 (285)
T ss_dssp TTCEEEEC---CCSSTTSHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEE---CCCCCCcHHHHHHHHHHHcC-CEEEEEeC
Confidence 44579999 3331 466 67899999999 78888764
No 113
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=21.18 E-value=91 Score=29.49 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCCCCcC-HHHHHHHHHhcCCccEEEEe
Q 023840 13 HKPTIMVTNDDGIDAPG-LRSLVRVLVSTNRYTVQVCA 49 (276)
Q Consensus 13 ~~~~ILlTNDDGi~spG-i~aL~~aL~~~g~~~V~VVA 49 (276)
+..+|||. ||.+++-+ +++.++.|+++|..+|.+++
T Consensus 337 ~gk~VlLV-DDvitTG~Tl~~a~~~L~~~Ga~~V~~~~ 373 (459)
T 1ao0_A 337 EGKRVVMV-DDSIVRGTTSRRIVTMLREAGATEVHVKI 373 (459)
T ss_dssp TTCEEEEE-ESCCSSSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCeEEEE-eeeecCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 34578887 99998643 78899999999966666654
No 114
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=20.46 E-value=5.2e+02 Score=26.48 Aligned_cols=32 Identities=31% Similarity=0.344 Sum_probs=20.5
Q ss_pred CCCCcEEEecCCCCCCCccccccchhHHHHHHHHHcCCCEEEE
Q 023840 100 PSVPDLVISGINMGSNCGYHVVYSGTVAGAREAFFHGVPSVSI 142 (276)
Q Consensus 100 ~~~PDLVVSGIN~G~N~G~~v~ySGTVgAA~Ea~~~GiPaIAv 142 (276)
..+||+|.+ | ...+|-+ |++-+-..|+|.|..
T Consensus 405 ~~~PDVIHs--H--------~~~sglv-a~llar~~gvP~V~T 436 (816)
T 3s28_A 405 NGKPDLIIG--N--------YSDGNLV-ASLLAHKLGVTQCTI 436 (816)
T ss_dssp SSCCSEEEE--E--------HHHHHHH-HHHHHHHHTCCEEEE
T ss_pred CCCCeEEEe--C--------CchHHHH-HHHHHHHcCCCEEEE
Confidence 458999964 1 1234444 556677889998754
No 115
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=20.23 E-value=1.5e+02 Score=24.90 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=24.3
Q ss_pred CCCeEEEecCCCCCC-cCH-HHHHHHHHhcCCccEEEEee
Q 023840 13 HKPTIMVTNDDGIDA-PGL-RSLVRVLVSTNRYTVQVCAP 50 (276)
Q Consensus 13 ~~~~ILlTNDDGi~s-pGi-~aL~~aL~~~g~~~V~VVAP 50 (276)
+..++||| |-.+ -|| +++++.|.+.| ++|+++.-
T Consensus 8 ~~k~vlVT---Gas~~~gIG~~ia~~l~~~G-~~V~~~~r 43 (265)
T 1qsg_A 8 SGKRILVT---GVASKLSIAYGIAQAMHREG-AELAFTYQ 43 (265)
T ss_dssp TTCEEEEC---CCCSTTSHHHHHHHHHHHTT-CEEEEEES
T ss_pred CCCEEEEE---CCCCCCCHHHHHHHHHHHCC-CEEEEEcC
Confidence 34579999 3321 466 67899999999 78888764
No 116
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=20.01 E-value=1.4e+02 Score=24.85 Aligned_cols=51 Identities=18% Similarity=0.197 Sum_probs=29.0
Q ss_pred chhHHHHHHHHHcCCCEEEEeeecCCCCCCCccc---HHHHHHHHHHHHHHHHHHH
Q 023840 123 SGTVAGAREAFFHGVPSVSISYDWVGGKSNVNDY---TLAAEACLPIINAILAEIR 175 (276)
Q Consensus 123 SGTVgAA~Ea~~~GiPaIAvS~~~~~~~~~~~~~---~~aa~~~~~li~~l~~~~~ 175 (276)
.||=|.....+..|||++.++..... .+++..| +.. ..+.+++.++++++.
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~~~-~Ht~~E~v~i~dl-~~~~~ll~~~i~~L~ 348 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPIRY-MHSQVELADARDV-DNTIKLAKALLEELK 348 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEEBS-TTSTTCEEEHHHH-HHHHHHHHHHHHHCC
T ss_pred cccHHHHHHHhcCCCCEEEECcccCC-CCcccEEEEHHHH-HHHHHHHHHHHHhCc
Confidence 46766666666789999999875332 2332222 222 233456666665543
Done!