Query 023842
Match_columns 276
No_of_seqs 225 out of 1910
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 07:02:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 6.3E-63 1.4E-67 424.9 15.7 240 5-253 2-242 (303)
2 PTZ00480 serine/threonine-prot 100.0 1.3E-59 2.8E-64 429.8 23.7 251 4-254 9-259 (320)
3 cd07420 MPP_RdgC Drosophila me 100.0 6.5E-59 1.4E-63 425.7 25.4 245 1-254 2-281 (321)
4 PTZ00244 serine/threonine-prot 100.0 3.9E-59 8.4E-64 423.7 23.1 252 3-254 1-252 (294)
5 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 9.3E-59 2E-63 421.6 23.2 249 6-254 2-250 (293)
6 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 9.6E-58 2.1E-62 413.4 22.7 240 6-254 2-242 (285)
7 KOG0374 Serine/threonine speci 100.0 5.4E-58 1.2E-62 420.5 20.4 252 2-253 5-260 (331)
8 PTZ00239 serine/threonine prot 100.0 1.8E-57 4E-62 414.1 23.3 240 6-254 3-243 (303)
9 cd07416 MPP_PP2B PP2B, metallo 100.0 9.3E-57 2E-61 410.8 24.5 241 6-254 3-250 (305)
10 KOG0373 Serine/threonine speci 100.0 4.3E-58 9.2E-63 389.7 13.1 244 1-253 1-245 (306)
11 smart00156 PP2Ac Protein phosp 100.0 1.7E-56 3.7E-61 403.4 23.2 228 27-254 1-228 (271)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.7E-56 5.9E-61 408.8 23.0 245 1-254 11-261 (316)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.1E-54 4.5E-59 396.6 22.5 246 9-254 1-270 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 5.7E-54 1.2E-58 398.9 25.5 253 1-254 7-301 (377)
15 KOG0375 Serine-threonine phosp 100.0 7E-52 1.5E-56 372.5 13.4 228 26-253 60-294 (517)
16 KOG0371 Serine/threonine prote 100.0 5.1E-49 1.1E-53 340.9 11.6 240 6-254 20-260 (319)
17 KOG0377 Protein serine/threoni 100.0 9.4E-44 2E-48 326.6 13.3 244 2-254 117-390 (631)
18 KOG0376 Serine-threonine phosp 100.0 6.8E-36 1.5E-40 279.5 10.3 230 26-256 182-417 (476)
19 cd00144 MPP_PPP_family phospho 100.0 3.9E-32 8.5E-37 237.4 17.9 186 57-253 1-196 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 1.7E-28 3.7E-33 218.5 9.6 122 54-177 1-146 (245)
21 cd07423 MPP_PrpE Bacillus subt 99.9 2.5E-26 5.4E-31 203.2 10.9 120 54-176 1-142 (234)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 1.7E-25 3.6E-30 196.5 15.7 115 57-174 2-143 (222)
23 PRK00166 apaH diadenosine tetr 99.9 3.4E-25 7.4E-30 200.0 14.9 121 54-178 1-128 (275)
24 cd07425 MPP_Shelphs Shewanella 99.9 2.8E-25 6E-30 193.3 13.4 162 57-253 1-183 (208)
25 TIGR00668 apaH bis(5'-nucleosy 99.9 1.2E-25 2.6E-30 201.8 11.3 124 54-182 1-131 (279)
26 PHA02239 putative protein phos 99.9 2.6E-25 5.7E-30 196.7 12.6 155 54-230 1-202 (235)
27 cd07422 MPP_ApaH Escherichia c 99.9 4.1E-25 9E-30 197.5 13.1 122 56-182 1-129 (257)
28 PRK11439 pphA serine/threonine 99.9 1.5E-25 3.3E-30 196.2 9.9 116 53-174 16-146 (218)
29 cd07421 MPP_Rhilphs Rhilph pho 99.9 3.2E-24 6.9E-29 193.2 13.8 149 54-207 2-243 (304)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 5.1E-24 1.1E-28 184.9 10.6 142 54-207 1-157 (207)
31 PRK09968 serine/threonine-spec 99.9 2.6E-22 5.5E-27 175.9 9.0 115 54-174 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 6.8E-13 1.5E-17 106.7 12.0 159 54-248 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 6.9E-11 1.5E-15 97.4 11.3 83 55-174 1-86 (155)
34 PRK09453 phosphodiesterase; Pr 99.2 2.6E-11 5.6E-16 103.1 8.3 69 54-126 1-77 (182)
35 TIGR00040 yfcE phosphoesterase 99.2 1E-10 2.2E-15 97.1 10.1 63 54-125 1-64 (158)
36 PF12850 Metallophos_2: Calcin 99.2 1E-10 2.2E-15 95.6 7.8 131 54-259 1-131 (156)
37 cd07397 MPP_DevT Myxococcus xa 99.0 1.8E-09 4E-14 95.5 11.3 63 55-127 2-65 (238)
38 cd07379 MPP_239FB Homo sapiens 99.0 1.9E-09 4.1E-14 87.1 9.8 118 55-253 1-120 (135)
39 cd07394 MPP_Vps29 Homo sapiens 98.9 1E-08 2.2E-13 87.2 10.6 125 55-269 1-134 (178)
40 cd00838 MPP_superfamily metall 98.9 2.4E-08 5.2E-13 77.8 10.6 117 57-253 1-119 (131)
41 cd07392 MPP_PAE1087 Pyrobaculu 98.8 2.5E-08 5.5E-13 83.9 10.3 66 56-127 1-67 (188)
42 cd07388 MPP_Tt1561 Thermus the 98.8 8E-09 1.7E-13 90.9 7.2 72 53-125 4-75 (224)
43 cd07404 MPP_MS158 Microscilla 98.7 2.2E-08 4.7E-13 83.5 6.9 67 56-125 1-68 (166)
44 PRK05340 UDP-2,3-diacylglucosa 98.7 1.4E-07 2.9E-12 83.8 10.3 71 54-126 1-84 (241)
45 cd07403 MPP_TTHA0053 Thermus t 98.6 5.8E-07 1.3E-11 72.3 11.1 107 57-253 1-107 (129)
46 cd07400 MPP_YydB Bacillus subt 98.6 6.7E-07 1.4E-11 72.5 11.5 117 56-253 1-129 (144)
47 COG0622 Predicted phosphoester 98.5 5.4E-07 1.2E-11 76.2 9.2 134 54-270 2-138 (172)
48 PRK11340 phosphodiesterase Yae 98.4 6.1E-07 1.3E-11 81.1 6.4 71 53-125 49-125 (271)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.4 1.4E-06 2.9E-11 76.9 8.4 68 56-125 1-81 (231)
50 cd07385 MPP_YkuE_C Bacillus su 98.3 8.1E-07 1.8E-11 77.1 5.7 72 53-126 1-77 (223)
51 cd07402 MPP_GpdQ Enterobacter 98.3 2.8E-06 6E-11 74.6 9.0 69 55-125 1-83 (240)
52 cd07383 MPP_Dcr2 Saccharomyces 98.3 2E-05 4.4E-10 67.6 13.4 70 54-123 3-87 (199)
53 TIGR03729 acc_ester putative p 98.2 2.6E-06 5.6E-11 75.4 6.1 68 55-125 1-74 (239)
54 cd07399 MPP_YvnB Bacillus subt 98.2 8.9E-06 1.9E-10 71.0 8.8 70 55-125 2-82 (214)
55 PRK11148 cyclic 3',5'-adenosin 98.1 4.6E-05 1E-09 68.8 12.5 71 53-125 14-98 (275)
56 COG2129 Predicted phosphoester 98.1 0.00012 2.7E-09 63.8 13.4 175 53-251 3-189 (226)
57 TIGR00619 sbcd exonuclease Sbc 98.0 8.8E-06 1.9E-10 72.9 6.4 72 54-125 1-88 (253)
58 COG0639 ApaH Diadenosine tetra 98.0 5.1E-06 1.1E-10 66.2 4.5 129 128-257 4-141 (155)
59 cd07395 MPP_CSTP1 Homo sapiens 98.0 8.8E-05 1.9E-09 66.3 12.7 71 55-125 6-99 (262)
60 cd07393 MPP_DR1119 Deinococcus 98.0 6.3E-05 1.4E-09 66.4 11.3 68 56-125 1-84 (232)
61 cd07396 MPP_Nbla03831 Homo sap 98.0 1.5E-05 3.2E-10 71.8 7.1 73 55-127 2-88 (267)
62 cd07391 MPP_PF1019 Pyrococcus 98.0 1.8E-05 3.9E-10 66.6 6.8 59 69-127 30-90 (172)
63 PHA02546 47 endonuclease subun 98.0 1.2E-05 2.7E-10 75.0 6.0 72 54-125 1-89 (340)
64 PRK04036 DNA polymerase II sma 97.9 3E-05 6.6E-10 76.1 7.7 114 53-173 243-388 (504)
65 cd07398 MPP_YbbF-LpxH Escheric 97.9 3.3E-05 7.2E-10 66.7 6.7 31 225-255 177-207 (217)
66 cd00840 MPP_Mre11_N Mre11 nucl 97.8 3.5E-05 7.6E-10 66.5 6.0 74 55-128 1-92 (223)
67 COG4186 Predicted phosphoester 97.7 0.0011 2.3E-08 54.9 12.4 147 55-267 5-169 (186)
68 cd07390 MPP_AQ1575 Aquifex aeo 97.7 6.7E-05 1.4E-09 62.9 5.5 67 56-127 1-84 (168)
69 TIGR00024 SbcD_rel_arch putati 97.7 0.00011 2.3E-09 64.9 7.0 69 54-126 15-103 (225)
70 TIGR00583 mre11 DNA repair pro 97.7 0.00012 2.5E-09 70.0 7.1 74 53-126 3-124 (405)
71 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.6 0.00012 2.5E-09 66.1 6.2 70 56-125 1-86 (262)
72 cd08165 MPP_MPPE1 human MPPE1 97.6 7.8E-05 1.7E-09 61.9 4.5 48 79-126 37-90 (156)
73 COG1409 Icc Predicted phosphoh 97.6 0.00023 4.9E-09 63.7 7.7 73 54-128 1-81 (301)
74 PRK10966 exonuclease subunit S 97.5 0.00015 3.2E-09 69.4 5.8 72 54-126 1-88 (407)
75 COG2908 Uncharacterized protei 97.4 0.001 2.2E-08 58.7 8.8 175 57-256 1-206 (237)
76 cd07401 MPP_TMEM62_N Homo sapi 97.3 0.00043 9.2E-09 62.1 6.0 71 56-126 2-90 (256)
77 KOG0376 Serine-threonine phosp 97.2 0.00011 2.4E-09 70.2 0.6 233 26-263 14-276 (476)
78 cd07386 MPP_DNA_pol_II_small_a 97.1 0.00071 1.5E-08 60.0 5.0 68 57-126 2-95 (243)
79 cd00839 MPP_PAPs purple acid p 97.1 0.0015 3.1E-08 59.2 6.7 70 54-127 5-83 (294)
80 COG1408 Predicted phosphohydro 97.1 0.001 2.3E-08 60.6 5.7 73 54-128 45-121 (284)
81 COG1407 Predicted ICC-like pho 97.0 0.0034 7.4E-08 55.5 7.9 107 48-177 14-142 (235)
82 COG0420 SbcD DNA repair exonuc 96.9 0.0024 5.1E-08 60.6 6.8 74 54-127 1-90 (390)
83 cd07380 MPP_CWF19_N Schizosacc 96.8 0.0023 5E-08 52.9 5.3 66 57-123 1-68 (150)
84 cd07384 MPP_Cdc1_like Saccharo 96.8 0.0025 5.3E-08 53.8 5.4 48 79-126 44-101 (171)
85 cd08166 MPP_Cdc1_like_1 unchar 96.7 0.0024 5.2E-08 55.0 5.1 46 80-125 42-93 (195)
86 cd00845 MPP_UshA_N_like Escher 96.6 0.0028 6E-08 56.2 5.0 66 55-125 2-82 (252)
87 cd08163 MPP_Cdc1 Saccharomyces 96.6 0.06 1.3E-06 48.4 13.1 25 223-247 202-226 (257)
88 PF14582 Metallophos_3: Metall 96.5 0.002 4.4E-08 56.5 3.1 73 53-126 5-103 (255)
89 PF08321 PPP5: PPP5 TPR repeat 96.0 0.016 3.4E-07 44.2 5.3 44 1-52 52-95 (95)
90 cd07410 MPP_CpdB_N Escherichia 95.8 0.011 2.4E-07 53.3 4.5 66 55-125 2-95 (277)
91 cd08164 MPP_Ted1 Saccharomyces 95.7 0.02 4.3E-07 49.3 5.1 68 59-126 22-112 (193)
92 PLN02533 probable purple acid 95.6 0.014 3E-07 56.4 4.5 71 53-126 139-212 (427)
93 COG1768 Predicted phosphohydro 95.5 0.22 4.7E-06 42.5 10.4 45 79-127 42-88 (230)
94 cd07408 MPP_SA0022_N Staphyloc 95.3 0.025 5.3E-07 50.6 4.8 66 55-125 2-82 (257)
95 cd07378 MPP_ACP5 Homo sapiens 94.9 0.052 1.1E-06 48.6 5.6 70 55-125 2-83 (277)
96 PF06874 FBPase_2: Firmicute f 94.9 0.025 5.4E-07 56.2 3.7 42 82-128 186-227 (640)
97 KOG2863 RNA lariat debranching 94.9 0.055 1.2E-06 50.5 5.6 73 54-126 1-89 (456)
98 cd07412 MPP_YhcR_N Bacillus su 94.7 0.045 9.8E-07 49.9 4.7 66 55-125 2-88 (288)
99 cd07411 MPP_SoxB_N Thermus the 93.7 0.089 1.9E-06 47.2 4.5 65 55-125 2-95 (264)
100 cd07409 MPP_CD73_N CD73 ecto-5 93.3 0.16 3.4E-06 46.1 5.4 66 55-125 2-94 (281)
101 KOG1432 Predicted DNA repair e 93.0 0.34 7.4E-06 45.1 7.0 48 78-126 98-148 (379)
102 TIGR00282 metallophosphoestera 92.7 0.2 4.3E-06 45.4 5.0 67 54-125 1-71 (266)
103 cd00842 MPP_ASMase acid sphing 92.5 0.22 4.8E-06 45.2 5.2 70 57-127 41-124 (296)
104 cd07406 MPP_CG11883_N Drosophi 92.3 0.22 4.7E-06 44.6 4.8 64 56-124 3-82 (257)
105 KOG3662 Cell division control 92.0 0.27 5.8E-06 47.0 5.1 73 54-126 49-145 (410)
106 PRK09419 bifunctional 2',3'-cy 91.8 0.18 3.9E-06 54.6 4.3 67 54-125 661-736 (1163)
107 KOG3325 Membrane coat complex 91.4 1.6 3.5E-05 36.1 8.4 62 55-125 2-66 (183)
108 COG1311 HYS2 Archaeal DNA poly 91.1 1.1 2.4E-05 43.5 8.4 113 55-171 227-364 (481)
109 cd07405 MPP_UshA_N Escherichia 90.2 0.31 6.8E-06 44.3 3.7 66 55-125 2-87 (285)
110 COG3855 Fbp Uncharacterized pr 89.5 0.36 7.9E-06 46.6 3.6 42 82-128 192-233 (648)
111 PF04042 DNA_pol_E_B: DNA poly 89.3 0.59 1.3E-05 40.1 4.5 72 56-127 1-93 (209)
112 cd07382 MPP_DR1281 Deinococcus 87.3 1.2 2.5E-05 40.1 5.2 66 55-125 1-70 (255)
113 COG0737 UshA 5'-nucleotidase/2 85.3 0.96 2.1E-05 44.6 4.0 69 53-126 26-116 (517)
114 KOG2476 Uncharacterized conser 85.0 1.6 3.5E-05 42.1 5.1 69 53-122 5-75 (528)
115 cd07407 MPP_YHR202W_N Saccharo 83.8 1.4 2.9E-05 40.2 4.0 66 55-125 7-97 (282)
116 cd08162 MPP_PhoA_N Synechococc 83.7 1.5 3.2E-05 40.5 4.3 65 55-124 2-90 (313)
117 PRK09420 cpdB bifunctional 2', 82.6 1.6 3.4E-05 44.5 4.2 69 52-125 24-122 (649)
118 TIGR01390 CycNucDiestase 2',3' 82.3 1.5 3.3E-05 44.4 4.0 67 54-125 3-99 (626)
119 PRK09419 bifunctional 2',3'-cy 82.2 1.5 3.2E-05 47.7 4.1 66 54-124 42-138 (1163)
120 KOG3339 Predicted glycosyltran 76.1 25 0.00053 30.3 8.7 85 82-171 40-140 (211)
121 PRK09558 ushA bifunctional UDP 76.1 3.2 6.9E-05 41.3 4.1 68 53-125 34-121 (551)
122 PRK11907 bifunctional 2',3'-cy 75.8 3.4 7.3E-05 43.2 4.2 68 53-125 115-213 (814)
123 PTZ00235 DNA polymerase epsilo 74.6 12 0.00027 34.2 7.1 73 54-126 28-123 (291)
124 KOG3947 Phosphoesterases [Gene 73.2 4 8.7E-05 37.1 3.5 95 26-128 25-129 (305)
125 TIGR01530 nadN NAD pyrophospha 72.5 5.6 0.00012 39.7 4.8 65 56-125 3-94 (550)
126 PTZ00422 glideosome-associated 71.2 6.6 0.00014 37.6 4.7 72 54-125 27-109 (394)
127 cd07387 MPP_PolD2_C PolD2 (DNA 70.5 17 0.00037 32.7 6.9 47 82-128 44-110 (257)
128 PRK09418 bifunctional 2',3'-cy 65.9 7.2 0.00016 40.6 4.1 67 53-124 39-141 (780)
129 KOG1378 Purple acid phosphatas 64.0 7.6 0.00017 37.7 3.6 26 228-253 323-348 (452)
130 PF06874 FBPase_2: Firmicute f 63.8 6.7 0.00014 39.5 3.2 23 53-75 32-54 (640)
131 PF14164 YqzH: YqzH-like prote 58.4 45 0.00097 23.5 5.7 47 1-48 1-47 (64)
132 PF13258 DUF4049: Domain of un 41.4 33 0.0007 30.7 3.5 88 82-176 86-187 (318)
133 PF02875 Mur_ligase_C: Mur lig 41.1 62 0.0013 23.5 4.6 69 53-121 11-81 (91)
134 KOG2310 DNA repair exonuclease 39.8 58 0.0013 32.6 5.3 55 53-107 13-79 (646)
135 PRK10773 murF UDP-N-acetylmura 35.5 99 0.0022 29.8 6.3 66 54-120 325-392 (453)
136 COG3855 Fbp Uncharacterized pr 33.1 18 0.0004 35.3 0.7 23 53-75 37-59 (648)
137 PF12641 Flavodoxin_3: Flavodo 32.3 2E+02 0.0044 23.8 6.8 101 57-176 2-115 (160)
138 TIGR00550 nadA quinolinate syn 30.9 67 0.0015 29.7 4.0 35 54-91 29-63 (310)
139 PF15007 CEP44: Centrosomal sp 30.5 44 0.00096 27.0 2.4 83 61-159 1-87 (131)
140 TIGR00282 metallophosphoestera 29.4 34 0.00073 31.0 1.8 39 83-125 2-41 (266)
141 COG3207 DIT1 Pyoverdine/dityro 29.2 1.3E+02 0.0027 27.5 5.3 42 49-90 101-156 (330)
142 COG0634 Hpt Hypoxanthine-guani 29.1 3.6E+02 0.0078 22.9 8.6 78 24-105 9-117 (178)
143 cd07382 MPP_DR1281 Deinococcus 28.6 44 0.00096 29.9 2.4 37 83-120 1-37 (255)
144 COG3560 FMR2 Predicted oxidore 27.1 1.8E+02 0.0038 24.9 5.5 45 21-68 19-65 (200)
145 COG4320 Uncharacterized protei 26.3 41 0.00089 31.5 1.7 57 43-108 46-107 (410)
146 TIGR01143 murF UDP-N-acetylmur 24.4 3E+02 0.0065 26.1 7.4 77 36-122 312-406 (417)
147 PLN00084 photosystem II subuni 23.2 52 0.0011 27.8 1.6 37 87-124 9-52 (214)
148 KOG3425 Uncharacterized conser 22.9 2.4E+02 0.0052 22.6 5.2 60 66-125 12-79 (128)
149 PF06490 FleQ: Flagellar regul 22.4 1.5E+02 0.0032 22.7 4.0 64 55-125 1-81 (109)
150 PF04800 ETC_C1_NDUFA4: ETC co 21.6 2E+02 0.0044 22.0 4.5 45 220-268 51-96 (101)
151 TIGR01428 HAD_type_II 2-haloal 21.5 3.1E+02 0.0068 22.5 6.2 67 54-123 109-175 (198)
152 PF09893 DUF2120: Uncharacteri 21.4 1.6E+02 0.0034 24.2 4.0 54 26-80 53-113 (146)
153 cd01533 4RHOD_Repeat_2 Member 21.2 3.2E+02 0.0069 20.2 5.7 85 26-120 11-100 (109)
154 KOG0918 Selenium-binding prote 21.2 6.2 0.00013 37.7 -4.7 91 82-178 49-143 (476)
155 COG1692 Calcineurin-like phosp 20.3 1.1E+02 0.0023 27.7 3.1 66 54-124 1-70 (266)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-63 Score=424.87 Aligned_cols=240 Identities=50% Similarity=0.991 Sum_probs=232.8
Q ss_pred HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcce
Q 023842 5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY 84 (276)
Q Consensus 5 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~ 84 (276)
.++..|+++.+++ .++++++..||.++.++|.+|+|+..++.|+.|+|||||++.+|..+|+..|-++.++|
T Consensus 2 dldr~ie~L~~~~--------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~Y 73 (303)
T KOG0372|consen 2 DLDRQIEQLRRCE--------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNY 73 (303)
T ss_pred cHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCce
Confidence 4678899999887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhh-hhhhHHHhhhhhcCCceEEeC
Q 023842 85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVAALVD 163 (276)
Q Consensus 85 vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lPl~~~i~ 163 (276)
+|||||||||..|+|++.+|+.||++||+++.+||||||...+.+.|||++||.++|+ ..+|+.+.+.|+.||++|+|+
T Consensus 74 LFLGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid 153 (303)
T KOG0372|consen 74 LFLGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIID 153 (303)
T ss_pred EeecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheec
Confidence 9999999999999999999999999999999999999999999999999999999995 689999999999999999999
Q ss_pred CeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEE
Q 023842 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (276)
Q Consensus 164 ~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iir 243 (276)
+++||||||++|++.+++||..+.|..++|..+.++|+|||||++. .+|.-++||+|+.||.++++.|++.||++.|+|
T Consensus 154 ~kifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~R 232 (303)
T KOG0372|consen 154 GKIFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICR 232 (303)
T ss_pred CcEEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHH
Confidence 9999999999999999999999999999999999999999999865 699999999999999999999999999999999
Q ss_pred ecccCCCCcc
Q 023842 244 AHQILKASEK 253 (276)
Q Consensus 244 gHe~~~~~~~ 253 (276)
+||-+.+|||
T Consensus 233 aHQLv~eGyk 242 (303)
T KOG0372|consen 233 AHQLVMEGYK 242 (303)
T ss_pred HHHHHHhhHH
Confidence 9999999986
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.3e-59 Score=429.81 Aligned_cols=251 Identities=73% Similarity=1.344 Sum_probs=239.8
Q ss_pred hHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcc
Q 023842 4 TVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEAN 83 (276)
Q Consensus 4 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~ 83 (276)
..++.+|+++++.+...++....|+++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.++
T Consensus 9 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ 88 (320)
T PTZ00480 9 IDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESN 88 (320)
T ss_pred cCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcce
Confidence 34788999999977555666778999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeC
Q 023842 84 YLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVD 163 (276)
Q Consensus 84 ~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~ 163 (276)
|||||||||||++|+|++.+++++|+.+|.++++||||||...++..+||..|+..+|+..+|..+.++|.+||++|+++
T Consensus 89 ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 89 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEE
Q 023842 164 EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICR 243 (276)
Q Consensus 164 ~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iir 243 (276)
+++|||||||+|...++++++.+.||.+.++.+.+.|+|||||.....+|.+++||.++.||.+++++||++||+++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999999
Q ss_pred ecccCCCCccc
Q 023842 244 AHQILKASEKK 254 (276)
Q Consensus 244 gHe~~~~~~~~ 254 (276)
|||++++|++.
T Consensus 249 ~Hq~v~~G~~~ 259 (320)
T PTZ00480 249 AHQVVEDGYEF 259 (320)
T ss_pred cCccccCceEE
Confidence 99999999874
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=6.5e-59 Score=425.74 Aligned_cols=245 Identities=32% Similarity=0.585 Sum_probs=222.6
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecC----ceeEEeCCCCCHHHHHHHHHhC
Q 023842 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYG 76 (276)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~----~i~viGDIHG~~~~l~~il~~~ 76 (276)
+|.+.++.+|+++...+ .|+++++.+||++|+++|++||++++++. |++||||||||+++|.++|+..
T Consensus 2 ~~~~~~~~~i~~~~~~~--------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~ 73 (321)
T cd07420 2 LTKDHIDALIEAFKEKQ--------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKN 73 (321)
T ss_pred CCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHc
Confidence 47788999999999866 79999999999999999999999999875 8999999999999999999999
Q ss_pred CCCCC-cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhh---hhhhHHHhhh
Q 023842 77 GYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN---VRVWKTFTDC 152 (276)
Q Consensus 77 ~~~~~-~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~---~~~~~~~~~~ 152 (276)
++++. ++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|..+.++
T Consensus 74 g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~ 153 (321)
T cd07420 74 GLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDV 153 (321)
T ss_pred CCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHH
Confidence 98854 6799999999999999999999999999999999999999999999999999999999996 7899999999
Q ss_pred hhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCC-----CCC----------------------cchhhhhhcCC
Q 023842 153 FNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVD-----VPD----------------------QGLLCDLLWAD 205 (276)
Q Consensus 153 ~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsd 205 (276)
|++||++|++++++|||||||++ ..++++++.+.|+.. .+. .+.+.|+||||
T Consensus 154 F~~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSD 232 (321)
T cd07420 154 FSWLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSD 232 (321)
T ss_pred HHhCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecC
Confidence 99999999999999999999997 468999999887421 011 14678999999
Q ss_pred CCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCccc
Q 023842 206 PDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKK 254 (276)
Q Consensus 206 p~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~ 254 (276)
|......|.+++||.++.||.+++++||++|++++||||||++++|++-
T Consensus 233 P~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~ 281 (321)
T cd07420 233 PKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEF 281 (321)
T ss_pred CccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEE
Confidence 9866555777889999999999999999999999999999999999874
No 4
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3.9e-59 Score=423.75 Aligned_cols=252 Identities=56% Similarity=1.078 Sum_probs=239.8
Q ss_pred hhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCc
Q 023842 3 ETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEA 82 (276)
Q Consensus 3 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~ 82 (276)
++.++.+|+++++......+....++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.+
T Consensus 1 ~~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~ 80 (294)
T PTZ00244 1 MSLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYS 80 (294)
T ss_pred CchHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcc
Confidence 35678999999997755566667899999999999999999999999999999999999999999999999999999989
Q ss_pred ceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEe
Q 023842 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV 162 (276)
Q Consensus 83 ~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i 162 (276)
+++|||||||||++|+|++.+++++|+.+|.+++++|||||...++..+||.+++..+|+..+|..+.++|++||+++++
T Consensus 81 ~~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii 160 (294)
T PTZ00244 81 NYLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVI 160 (294)
T ss_pred cEEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEE
Q 023842 163 DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLIC 242 (276)
Q Consensus 163 ~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~ii 242 (276)
+++++|||||++|.+.++++++.+.||.+.++.+++.|++||||.....+|.+++||.++.||.+++++||++||+++||
T Consensus 161 ~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~ii 240 (294)
T PTZ00244 161 SEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIV 240 (294)
T ss_pred cCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEE
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999999999
Q ss_pred EecccCCCCccc
Q 023842 243 RAHQILKASEKK 254 (276)
Q Consensus 243 rgHe~~~~~~~~ 254 (276)
||||++++|++.
T Consensus 241 R~Hq~~~~G~~~ 252 (294)
T PTZ00244 241 RAHQVMERGYGF 252 (294)
T ss_pred EcCccccCceEE
Confidence 999999999974
No 5
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=9.3e-59 Score=421.56 Aligned_cols=249 Identities=78% Similarity=1.403 Sum_probs=238.2
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCccee
Q 023842 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (276)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~v 85 (276)
++++|+++++.+....+....|+++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 57789999987655567777899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCe
Q 023842 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEK 165 (276)
Q Consensus 86 fLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~ 165 (276)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..+||.+|+..+|+..+|..+.++|++||++++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEec
Q 023842 166 ILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAH 245 (276)
Q Consensus 166 ~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgH 245 (276)
++|||||++|...++++++.+.||.+.++.+.+.+++||||.....+|.+++||.++.||.+++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987788999999999999999999999999999999999
Q ss_pred ccCCCCccc
Q 023842 246 QILKASEKK 254 (276)
Q Consensus 246 e~~~~~~~~ 254 (276)
|++++|++.
T Consensus 242 e~~~~G~~~ 250 (293)
T cd07414 242 QVVEDGYEF 250 (293)
T ss_pred ccccCeEEE
Confidence 999999974
No 6
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=9.6e-58 Score=413.45 Aligned_cols=240 Identities=53% Similarity=1.007 Sum_probs=229.3
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCccee
Q 023842 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (276)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~v 85 (276)
++.+|+++.+.. .++++++.+||++|++++++||++++++.+++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~l 73 (285)
T cd07415 2 LDKWIEQLKKCE--------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYL 73 (285)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEE
Confidence 577889998765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhh-hhhHHHhhhhhcCCceEEeCC
Q 023842 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV-RVWKTFTDCFNCLPVAALVDE 164 (276)
Q Consensus 86 fLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~-~~~~~~~~~~~~lPl~~~i~~ 164 (276)
|||||||||++|+|++.+++++|+.+|.++++||||||...++..+||.+|+..+|+. .+|..+.++|++||++|++++
T Consensus 74 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~ 153 (285)
T cd07415 74 FLGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDN 153 (285)
T ss_pred EEeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCC
Confidence 9999999999999999999999999999999999999999999999999999999974 899999999999999999999
Q ss_pred eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEe
Q 023842 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (276)
Q Consensus 165 ~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirg 244 (276)
+++|||||++|...++++++.+.||.+.+..+.+.|++||||... .+|.+++||.++.||.+++++||++||+++||||
T Consensus 154 ~i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 232 (285)
T cd07415 154 QIFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRA 232 (285)
T ss_pred eEEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEc
Confidence 999999999999999999999999999888889999999999865 7899999999999999999999999999999999
Q ss_pred cccCCCCccc
Q 023842 245 HQILKASEKK 254 (276)
Q Consensus 245 He~~~~~~~~ 254 (276)
||++++|++.
T Consensus 233 He~~~~G~~~ 242 (285)
T cd07415 233 HQLVMEGYQW 242 (285)
T ss_pred CccccceEEE
Confidence 9999999864
No 7
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=5.4e-58 Score=420.54 Aligned_cols=252 Identities=67% Similarity=1.222 Sum_probs=237.9
Q ss_pred ChhHHHHHHHHHHhccCCCCCc--cccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCC-C
Q 023842 2 DETVLDDIIRRLLDAKNGRTTK--QVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGG-Y 78 (276)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~--~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~-~ 78 (276)
....+.++|.+++......+.. +..++.+++.+||..+.+++..+|++++++.||.|+|||||++.+|.++++..+ +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 3456777888888876433322 445999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhh-hhhhHHHhhhhhcCC
Q 023842 79 PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLP 157 (276)
Q Consensus 79 ~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lP 157 (276)
|+..+|||||||||||++|+|++.+|+++|++||++++++|||||.+.++..|||++||.++|+ ..+|..|.+.|..||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999998 699999999999999
Q ss_pred ceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcC
Q 023842 158 VAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHD 237 (276)
Q Consensus 158 l~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~ 237 (276)
++|+++++++|+|||++|...++++++++.||.+.++.+++.|++|+||+....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CCeEEEecccCCCCcc
Q 023842 238 LDLICRAHQILKASEK 253 (276)
Q Consensus 238 l~~iirgHe~~~~~~~ 253 (276)
+++|||+||++.+|++
T Consensus 245 ldlivRaHqvv~dGye 260 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYE 260 (331)
T ss_pred cceEEEcCccccccce
Confidence 9999999999999993
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.8e-57 Score=414.11 Aligned_cols=240 Identities=49% Similarity=0.973 Sum_probs=228.9
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCccee
Q 023842 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (276)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~v 85 (276)
++.+|+++++.. .++++++.+||++|++++++||++++++.+++|+||||||+.+|.++|+..+.++.++||
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~l 74 (303)
T PTZ00239 3 IDRHIATLLNGG--------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYI 74 (303)
T ss_pred HHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 678899998765 789999999999999999999999999999999999999999999999999988899999
Q ss_pred eecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhh-hhhHHHhhhhhcCCceEEeCC
Q 023842 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV-RVWKTFTDCFNCLPVAALVDE 164 (276)
Q Consensus 86 fLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~-~~~~~~~~~~~~lPl~~~i~~ 164 (276)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..+||.+|+..+|+. .+|+.+.++|++||+++++++
T Consensus 75 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~ 154 (303)
T PTZ00239 75 FIGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEG 154 (303)
T ss_pred EeeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcC
Confidence 9999999999999999999999999999999999999999999999999999999964 789999999999999999999
Q ss_pred eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEe
Q 023842 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (276)
Q Consensus 165 ~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirg 244 (276)
+++|||||++|...++++++.+.||.+.+..+.+.|++||||.. ..+|.+++||.++.||.+++++||++||+++||||
T Consensus 155 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 233 (303)
T PTZ00239 155 QILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRA 233 (303)
T ss_pred eEEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEc
Confidence 99999999999999999999999999998889999999999985 47899999999999999999999999999999999
Q ss_pred cccCCCCccc
Q 023842 245 HQILKASEKK 254 (276)
Q Consensus 245 He~~~~~~~~ 254 (276)
||++++|++.
T Consensus 234 He~~~~G~~~ 243 (303)
T PTZ00239 234 HQLVMEGYKY 243 (303)
T ss_pred ChhhccceEE
Confidence 9999999874
No 9
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=9.3e-57 Score=410.75 Aligned_cols=241 Identities=46% Similarity=0.861 Sum_probs=226.3
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCccee
Q 023842 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (276)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~v 85 (276)
++.+++.+.... .++++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..+.++.++||
T Consensus 3 ~~~~~~~~~~~~--------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~yl 74 (305)
T cd07416 3 IDVLKAHFMREG--------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYL 74 (305)
T ss_pred HHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEE
Confidence 566777777766 789999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCe
Q 023842 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEK 165 (276)
Q Consensus 86 fLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~ 165 (276)
|||||||||++|+||+.+++++|+.+|.++++||||||.+.++..++|..++..+|+..+|..+.++|++||++++++++
T Consensus 75 FLGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~ 154 (305)
T cd07416 75 FLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQ 154 (305)
T ss_pred EECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred EEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCC------CcccC-CCCcEEecCHHHHHHHHHHcCC
Q 023842 166 ILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIE------GWGEN-DRGVSYTFGADKVVEFLQKHDL 238 (276)
Q Consensus 166 ~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~------~~~~~-~rg~~~~fG~~~~~~fl~~~~l 238 (276)
++|||||++|...++++++++.|+.+.+..+.+.|++||||..... .|.++ +||.++.||.+++++||++||+
T Consensus 155 i~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l 234 (305)
T cd07416 155 FLCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNL 234 (305)
T ss_pred EEEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCC
Confidence 9999999999999999999999998888888999999999975432 46665 8999999999999999999999
Q ss_pred CeEEEecccCCCCccc
Q 023842 239 DLICRAHQILKASEKK 254 (276)
Q Consensus 239 ~~iirgHe~~~~~~~~ 254 (276)
++||||||++++|++-
T Consensus 235 ~~iiR~He~~~~G~~~ 250 (305)
T cd07416 235 LSIIRAHEAQDAGYRM 250 (305)
T ss_pred eEEEEeccccccceEE
Confidence 9999999999999974
No 10
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-58 Score=389.73 Aligned_cols=244 Identities=46% Similarity=0.939 Sum_probs=235.7
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCC
Q 023842 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP 80 (276)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~ 80 (276)
|.+-.+++.|+..+.++ .|+++++..||+-++++|.+|.++..++.|+.|+|||||++.+|.++|+..|--|
T Consensus 1 m~~~d~d~wi~~vk~ck--------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP 72 (306)
T KOG0373|consen 1 MRKMDLDQWIETVKKCK--------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVP 72 (306)
T ss_pred CCcCCHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCC
Confidence 44556889999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhh-hhhhHHHhhhhhcCCce
Q 023842 81 EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVA 159 (276)
Q Consensus 81 ~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lPl~ 159 (276)
+++|||+|||||||..|+|++.+|+.||.+||.++.+||||||...+.+.|||++||+.+|+ ...|+.+.+.|+.|+++
T Consensus 73 ~tnYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~Ltla 152 (306)
T KOG0373|consen 73 DTNYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLA 152 (306)
T ss_pred CcceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999995 68999999999999999
Q ss_pred EEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCC
Q 023842 160 ALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLD 239 (276)
Q Consensus 160 ~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~ 239 (276)
|+|+++++|||||++|+..++++|.-+.|-.++|..+.++|++||||+. .+.|+-++||+++.||++.+.+|..-|+++
T Consensus 153 AiID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~ 231 (306)
T KOG0373|consen 153 AIIDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLN 231 (306)
T ss_pred HHhcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchH
Confidence 9999999999999999999999999999999999999999999999985 689999999999999999999999999999
Q ss_pred eEEEecccCCCCcc
Q 023842 240 LICRAHQILKASEK 253 (276)
Q Consensus 240 ~iirgHe~~~~~~~ 253 (276)
+|+|+||.+++|+|
T Consensus 232 LicRaHQLV~EG~K 245 (306)
T KOG0373|consen 232 LICRAHQLVQEGFK 245 (306)
T ss_pred HHHhHHHHHHhhHH
Confidence 99999999999975
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=1.7e-56 Score=403.35 Aligned_cols=228 Identities=56% Similarity=1.033 Sum_probs=220.2
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHH
Q 023842 27 LTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLA 106 (276)
Q Consensus 27 l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~ 106 (276)
++++++.+||++|++++++||++++++++++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhh
Q 023842 107 YKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNI 186 (276)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i 186 (276)
+|+.+|.++++||||||.+.++..+||.+|+..+|+..+|+.+.++|++||++++++++++|||||++|...++++++++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred cCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCccc
Q 023842 187 ARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKK 254 (276)
Q Consensus 187 ~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~ 254 (276)
.||.+.++...+.|++||||.....+|.+++||.++.||.+++++||++||+++||||||++++|++.
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~ 228 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEF 228 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEE
Confidence 99998888899999999999877789999999999999999999999999999999999999999875
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.7e-56 Score=408.79 Aligned_cols=245 Identities=41% Similarity=0.777 Sum_probs=229.2
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCc----eeEEeCCCCCHHHHHHHHHhC
Q 023842 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAP----IKICGDVHGQFSDLLRLFEYG 76 (276)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~----i~viGDIHG~~~~l~~il~~~ 76 (276)
.|.+.++.++++++..+ .|+++++.+||++|.+++++||++++++.+ ++||||||||+.+|.++|+..
T Consensus 11 i~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~ 82 (316)
T cd07417 11 VTLEFVKEMIEWFKDQK--------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELN 82 (316)
T ss_pred CCHHHHHHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhc
Confidence 36788999999998866 789999999999999999999999998754 999999999999999999999
Q ss_pred CCCCC-cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhc
Q 023842 77 GYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNC 155 (276)
Q Consensus 77 ~~~~~-~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~ 155 (276)
++++. ++|||||||||||++|+||+.+++++|+.+|.++++||||||...++..++|..++..+|+..+|..+.++|++
T Consensus 83 g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~ 162 (316)
T cd07417 83 GLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNW 162 (316)
T ss_pred CCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHh
Confidence 98765 57999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEeCCeEEEEeCCC-CCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHH
Q 023842 156 LPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQ 234 (276)
Q Consensus 156 lPl~~~i~~~~l~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~ 234 (276)
||++++++++++|||||+ ++...++++++++.|+.+.+..+.+.|+|||||... .+|.+++||.++.||.+++++||+
T Consensus 163 LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~ 241 (316)
T cd07417 163 LPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLE 241 (316)
T ss_pred chHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHH
Confidence 999999999999999999 456789999999999988888899999999999865 678999999999999999999999
Q ss_pred HcCCCeEEEecccCCCCccc
Q 023842 235 KHDLDLICRAHQILKASEKK 254 (276)
Q Consensus 235 ~~~l~~iirgHe~~~~~~~~ 254 (276)
+||+++||||||++++|++.
T Consensus 242 ~n~l~~iiR~He~~~~G~~~ 261 (316)
T cd07417 242 ENNLEYIIRSHEVKDEGYEV 261 (316)
T ss_pred HcCCcEEEECCcccceeEEE
Confidence 99999999999999999875
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.1e-54 Score=396.61 Aligned_cols=246 Identities=45% Similarity=0.852 Sum_probs=222.1
Q ss_pred HHHHHHhccCCCC--CccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCC-----
Q 023842 9 IIRRLLDAKNGRT--TKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPE----- 81 (276)
Q Consensus 9 ~i~~~~~~~~~~~--~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~----- 81 (276)
+|++++....+.. ..+..|+++++.+||++|++++++||++++++.+++||||||||+++|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 3677777776654 556789999999999999999999999999999999999999999999999999988754
Q ss_pred ---cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhh------hhhHHHhhh
Q 023842 82 ---ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV------RVWKTFTDC 152 (276)
Q Consensus 82 ---~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~------~~~~~~~~~ 152 (276)
.+|||||||||||++|+||+.++++++..+|.++++||||||.+.++..+||..++..+++. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999888854 688999999
Q ss_pred hhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCC-CCCCcchhhhhhcCCCCCC--CCCcccCC---CCcE--Eec
Q 023842 153 FNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPV-DVPDQGLLCDLLWADPDKD--IEGWGEND---RGVS--YTF 224 (276)
Q Consensus 153 ~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~--~~~~~~~~---rg~~--~~f 224 (276)
|++||++++++++++|||||++|...++++++.+.||. ..+..+.+.|++||||... ..+|.+++ ||.+ +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999899999999999999999999999997 3455678899999999864 34566665 8887 799
Q ss_pred CHHHHHHHHHHcCCCeEEEecccCCCCccc
Q 023842 225 GADKVVEFLQKHDLDLICRAHQILKASEKK 254 (276)
Q Consensus 225 G~~~~~~fl~~~~l~~iirgHe~~~~~~~~ 254 (276)
|.+++++||++||+++||||||++.+|++.
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~ 270 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFER 270 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEE
Confidence 999999999999999999999999999974
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=5.7e-54 Score=398.91 Aligned_cols=253 Identities=34% Similarity=0.628 Sum_probs=220.4
Q ss_pred CChhHHHHHHHHHHhccCCC--CCccccCCHHHHHHHHHHHHHHHhhCCCceeec----CceeEEeCCCCCHHHHHHHHH
Q 023842 1 MDETVLDDIIRRLLDAKNGR--TTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFE 74 (276)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~l~~il~ 74 (276)
.|.+.+++||+.+++....- ......++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~ 86 (377)
T cd07418 7 LTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86 (377)
T ss_pred cCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHH
Confidence 36678899999998864211 122335889999999999999999999999997 799999999999999999999
Q ss_pred hCCCCCC-cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhh---hhhHHHh
Q 023842 75 YGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV---RVWKTFT 150 (276)
Q Consensus 75 ~~~~~~~-~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~---~~~~~~~ 150 (276)
..++++. ++|||||||||||++|+||+.+++++|+.+|.++++||||||...++..+||.+++..+|+. .+|+.+.
T Consensus 87 ~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~ 166 (377)
T cd07418 87 DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCL 166 (377)
T ss_pred HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHH
Confidence 9998775 45999999999999999999999999999999999999999999999999999999999853 6999999
Q ss_pred hhhhcCCceEEeCCeEEEEeCCCC---------------------------CCCCCHHHHhhhcCCC-CCCCcc---hhh
Q 023842 151 DCFNCLPVAALVDEKILCMHGGLS---------------------------PDLKNLDQIRNIARPV-DVPDQG---LLC 199 (276)
Q Consensus 151 ~~~~~lPl~~~i~~~~l~vHaGi~---------------------------~~~~~~~~i~~i~r~~-~~~~~~---~~~ 199 (276)
+||++||++++++++++||||||+ |...++++|+.+.|+. +.+... ++.
T Consensus 167 ~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~ 246 (377)
T cd07418 167 GCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPG 246 (377)
T ss_pred HHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccccce
Confidence 999999999999989999999994 3456899999999974 444433 478
Q ss_pred hhhcCCCCCCCCCcccC-CCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCccc
Q 023842 200 DLLWADPDKDIEGWGEN-DRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKK 254 (276)
Q Consensus 200 dllWsdp~~~~~~~~~~-~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~ 254 (276)
|+|||||... .+|.++ .||.++.||.+++++||++|++++||||||++++++++
T Consensus 247 dlLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~ 301 (377)
T cd07418 247 DVLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKR 301 (377)
T ss_pred eeEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCccccccc
Confidence 9999999865 556555 79999999999999999999999999999986655553
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7e-52 Score=372.50 Aligned_cols=228 Identities=44% Similarity=0.871 Sum_probs=217.8
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHH
Q 023842 26 QLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLL 105 (276)
Q Consensus 26 ~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~ 105 (276)
+++++..+.|+.+++.+|++|+++++++.||.|+|||||+|.+|.++|+..|-|..++|+|||||||||..|+|++.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 58999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhh
Q 023842 106 AYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRN 185 (276)
Q Consensus 106 ~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~ 185 (276)
+||+.||..+++||||||.+.+...+.|..||.-+|+.++|++..+.|..||+||..+..++|||||++|...++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCcchhhhhhcCCCCCCC------CCccc-CCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 186 IARPVDVPDQGLLCDLLWADPDKDI------EGWGE-NDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 186 i~r~~~~~~~~~~~dllWsdp~~~~------~~~~~-~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
+.|..++|.-+.++|+|||||.++. +.|.. +-||.+|.|...++++||+.||+-.|||+||..++||+
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYR 294 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYR 294 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhh
Confidence 9999999999999999999997542 23443 45999999999999999999999999999999999987
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-49 Score=340.90 Aligned_cols=240 Identities=50% Similarity=0.972 Sum_probs=228.6
Q ss_pred HHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCccee
Q 023842 6 LDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANYL 85 (276)
Q Consensus 6 ~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~v 85 (276)
++..|+.+..++ .+++.++..+|+.|+++|++|.++..++.+++|+||+||+|++|.++++..|..++.+|+
T Consensus 20 vd~~ie~L~~ck--------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 20 VDPWIEQLYKCK--------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccchHHHHhcC--------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 455778888888 899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhh-hhhhhHHHhhhhhcCCceEEeCC
Q 023842 86 FLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF-NVRVWKTFTDCFNCLPVAALVDE 164 (276)
Q Consensus 86 fLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~-~~~~~~~~~~~~~~lPl~~~i~~ 164 (276)
|+|||||||++|.|++.+|.++|++||++|.+||||||...+.+.|||++||.++| ...+|+.|.+.|..+|+.+.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999 56899999999999999999999
Q ss_pred eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEe
Q 023842 165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA 244 (276)
Q Consensus 165 ~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirg 244 (276)
+++|+|||++|...+++.+..+.|..++|..+.++|+|||||+.. -+|..++||.++-||.+..+.|-.+||+++|-|.
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr-~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDR-CGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcccC-CCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 999999999999999999999999888999999999999999854 8899999999999999999999999999999999
Q ss_pred cccCCCCccc
Q 023842 245 HQILKASEKK 254 (276)
Q Consensus 245 He~~~~~~~~ 254 (276)
||-+.+|+.=
T Consensus 251 hqlvm~g~nW 260 (319)
T KOG0371|consen 251 HQLVMEGYNW 260 (319)
T ss_pred HHHHhcccce
Confidence 9999998763
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-44 Score=326.60 Aligned_cols=244 Identities=30% Similarity=0.581 Sum_probs=218.4
Q ss_pred ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeec----CceeEEeCCCCCHHHHHHHHHhCC
Q 023842 2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGG 77 (276)
Q Consensus 2 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~l~~il~~~~ 77 (276)
+..+++.+|+.+...+ .|++..++.|+.+|+++|++.|++-.++ ..+.|+||+||.+++|.-+|.+.|
T Consensus 117 ~~~~i~~lieaFk~kq--------~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNG 188 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKKKQ--------RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNG 188 (631)
T ss_pred CchHHHHHHHHHHHhh--------hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCC
Confidence 5667888999988876 8999999999999999999999998874 469999999999999999999999
Q ss_pred CCCCc-ceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhh---hhhhhHHHhhhh
Q 023842 78 YPPEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF---NVRVWKTFTDCF 153 (276)
Q Consensus 78 ~~~~~-~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~---~~~~~~~~~~~~ 153 (276)
+|..+ -|||.||+||||.+|+|||..|+++-+.+|..+++-|||||..++|..|||..|...+| +.++.+.+.++|
T Consensus 189 lPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy 268 (631)
T KOG0377|consen 189 LPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVY 268 (631)
T ss_pred CCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHH
Confidence 98765 49999999999999999999999999999999999999999999999999999999998 568889999999
Q ss_pred hcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCC---------CCC-------------CCcchhhhhhcCCCCCCCC
Q 023842 154 NCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARP---------VDV-------------PDQGLLCDLLWADPDKDIE 211 (276)
Q Consensus 154 ~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~---------~~~-------------~~~~~~~dllWsdp~~~~~ 211 (276)
++||++.+++.++++||||++. .+.++-+.++.|- ++. .++..+.|++||||.....
T Consensus 269 ~WLPi~tiid~~ilvvHGGiSd-~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~G 347 (631)
T KOG0377|consen 269 RWLPIGTIIDSRILVVHGGISD-STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMG 347 (631)
T ss_pred HhcchhhhcccceEEEecCccc-chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccC
Confidence 9999999999999999999975 3466666666542 111 0245678999999998878
Q ss_pred CcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCccc
Q 023842 212 GWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKK 254 (276)
Q Consensus 212 ~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~ 254 (276)
+|.+.-||.|++||++.+..||++++++++||+|||..+|+.=
T Consensus 348 C~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf 390 (631)
T KOG0377|consen 348 CVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEF 390 (631)
T ss_pred CCcccccCCcceeCchHHHHHHHHhCceeeeeecccCCCccee
Confidence 8888889999999999999999999999999999999999864
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.8e-36 Score=279.51 Aligned_cols=230 Identities=43% Similarity=0.799 Sum_probs=214.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceeec----CceeEEeCCCCCHHHHHHHHHhCCCCCC-cceeeecCcccCCCCcHHH
Q 023842 26 QLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIET 100 (276)
Q Consensus 26 ~l~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~l~~il~~~~~~~~-~~~vfLGD~VDrG~~s~ev 100 (276)
.++...+-+|+..+..+++.+|++++++ .++.|+||+||++.++.++++..+.++. ..++|.||++|||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 6777778899999999999999999885 4689999999999999999999998876 5699999999999999999
Q ss_pred HHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCC-CCCC
Q 023842 101 ICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSP-DLKN 179 (276)
Q Consensus 101 l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~-~~~~ 179 (276)
+..+...++.+|++++++|||||...+++.|+|..++..+|.++.+..+.+.|..||++..++++++.+|||+.. ....
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864 4568
Q ss_pred HHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcccce
Q 023842 180 LDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKKGK 256 (276)
Q Consensus 180 ~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~ 256 (276)
++++++|.|+...++....++++||||... .+..++.||.+..||.+++.+||+.||++.||||||+-+.||.-.+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh 417 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEH 417 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeec
Confidence 999999999988888999999999999865 7888899999999999999999999999999999999999987665
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=3.9e-32 Score=237.38 Aligned_cols=186 Identities=48% Similarity=0.851 Sum_probs=151.3
Q ss_pred eEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhH
Q 023842 57 KICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 136 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 136 (276)
+|||||||++++|.++++.++..+.+++||||||||||+++.+++.+++.++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999998776 8899999999999988765554433
Q ss_pred H---------HhhhhhhhhHHHhhhhhcCCceEEeCC-eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCC
Q 023842 137 C---------KRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADP 206 (276)
Q Consensus 137 ~---------~~~~~~~~~~~~~~~~~~lPl~~~i~~-~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 206 (276)
. .......++..+.+|++.+|+++.++. +++|||||++|.....++.. ..+......+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345677888899999999998876 89999999999876555443 2233455689999999
Q ss_pred CCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 207 DKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 207 ~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
.........+.++. |++.+..|++.++.+.|||||+++..+..
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~ 196 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYE 196 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccE
Confidence 75433333333333 99999999999999999999999998873
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=1.7e-28 Score=218.46 Aligned_cols=122 Identities=23% Similarity=0.432 Sum_probs=97.0
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC---------CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCccc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP---------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHEC 124 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~---------~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (276)
|+++||||||||++.|.++|+++++. ..+++|||||||||||+|.+|+++++++. .+.++++|+||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 68999999999999999999998874 45789999999999999999999998874 45689999999999
Q ss_pred chhhhhccc-------hhHHHhhh-------hhhhhHHHhhhhhcCCceEEeC-CeEEEEeCCCCCCC
Q 023842 125 ASINRIYGF-------YDECKRRF-------NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDL 177 (276)
Q Consensus 125 ~~~~~~~~f-------~~e~~~~~-------~~~~~~~~~~~~~~lPl~~~i~-~~~l~vHaGi~~~~ 177 (276)
++++...+- ..+....| ...+.+.+.+|++++|++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 887643210 01111122 1346678899999999987763 57999999998763
No 21
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=2.5e-26 Score=203.15 Aligned_cols=120 Identities=28% Similarity=0.510 Sum_probs=96.3
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCC----------CcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPP----------EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~----------~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (276)
||+.||||||||+++|+++|+++++.+ .+++||||||||||++|.+|+++|++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 689999999999999999999997753 46899999999999999999999998863 347999999999
Q ss_pred cchhhhhcc--------chhHHHhhh---hhhhhHHHhhhhhcCCceEEeC-CeEEEEeCCCCCC
Q 023842 124 CASINRIYG--------FYDECKRRF---NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPD 176 (276)
Q Consensus 124 ~~~~~~~~~--------f~~e~~~~~---~~~~~~~~~~~~~~lPl~~~i~-~~~l~vHaGi~~~ 176 (276)
.++++...+ +. +....+ ...+.+.+.+||++||+...++ ++++|||||+++.
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~ 142 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEE 142 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChH
Confidence 988764322 11 111222 2356678899999999987765 4799999998764
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=1.7e-25 Score=196.52 Aligned_cols=115 Identities=25% Similarity=0.428 Sum_probs=90.7
Q ss_pred eEEeCCCCCHHHHHHHHHhCCCC--------CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhh
Q 023842 57 KICGDVHGQFSDLLRLFEYGGYP--------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il~~~~~~--------~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (276)
+||||||||++.|+++|+++++. +.+++|||||||||||+|.+|+++++++. .+.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 79999999999999999998875 46789999999999999999999999885 345799999999999875
Q ss_pred hhcc------ch-----------hHHHhhhh--hhhhHHHhhhhhcCCceEEeCCeEEEEeCCCC
Q 023842 129 RIYG------FY-----------DECKRRFN--VRVWKTFTDCFNCLPVAALVDEKILCMHGGLS 174 (276)
Q Consensus 129 ~~~~------f~-----------~e~~~~~~--~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~ 174 (276)
...+ +. .+..+.+. .+..+.+.+||++||++...+ +++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~-~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLG-GVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEEC-CEEEEECCcC
Confidence 3211 00 01111221 234577899999999998764 6999999985
No 23
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.93 E-value=3.4e-25 Score=199.97 Aligned_cols=121 Identities=19% Similarity=0.363 Sum_probs=98.0
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (276)
|+++||||||||+++|.++|+++++. ..+.+||+||+|||||+|.+|++++.++ +.++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 68999999999999999999999875 4688999999999999999999999876 347999999999988775554
Q ss_pred chh-----HHHhhhhhhhhHHHhhhhhcCCceEEe-CCeEEEEeCCCCCCCC
Q 023842 133 FYD-----ECKRRFNVRVWKTFTDCFNCLPVAALV-DEKILCMHGGLSPDLK 178 (276)
Q Consensus 133 f~~-----e~~~~~~~~~~~~~~~~~~~lPl~~~i-~~~~l~vHaGi~~~~~ 178 (276)
... ...+.......+.+.+|++++|+...+ ++++++||||++|.+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~ 128 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD 128 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC
Confidence 321 111112223456688999999998775 5579999999999874
No 24
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.93 E-value=2.8e-25 Score=193.30 Aligned_cols=162 Identities=22% Similarity=0.344 Sum_probs=117.6
Q ss_pred eEEeCCCCCHHHHHHHHHhCCC--------CCCcceeeecCcccCCCCcHHHHHHHHHHhhh---cCCcEEEcCCCcccc
Q 023842 57 KICGDVHGQFSDLLRLFEYGGY--------PPEANYLFLGDYVDRGKQSIETICLLLAYKVK---YKENFFLLRGNHECA 125 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il~~~~~--------~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~---~p~~v~~lrGNHE~~ 125 (276)
+||||||||+++|.++|+.+++ .+.+.+|++||+||||+++.++++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35688999999999999999999999998754 356799999999999
Q ss_pred hhhhhccchhH-HHhhhh------hh---hhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCc
Q 023842 126 SINRIYGFYDE-CKRRFN------VR---VWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQ 195 (276)
Q Consensus 126 ~~~~~~~f~~e-~~~~~~------~~---~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~ 195 (276)
.++..+.+... ...... .. ....+.+|++++|+...++ +++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 88754332211 110000 11 1234578999999998876 59999999943
Q ss_pred chhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 196 GLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 196 ~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
+|++....... .. .-+...+.++++.++.++||+||+.++.+..
T Consensus 140 ------~w~r~y~~~~~---~~-----~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~ 183 (208)
T cd07425 140 ------LWYRGYSKETS---DK-----ECAAAHLDKVLERLGAKRMVVGHTPQEGGIV 183 (208)
T ss_pred ------HHhhHhhhhhh---hc-----cchHHHHHHHHHHcCCCeEEEcCeeeecCce
Confidence 23221100000 00 0122567889999999999999999988764
No 25
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.93 E-value=1.2e-25 Score=201.81 Aligned_cols=124 Identities=22% Similarity=0.400 Sum_probs=102.4
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCC-CcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPP-EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~-~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (276)
|+++||||||||+++|+++|+++++.+ .++++|+||+|||||+|++|++++.++. .++++|+||||.++++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 679999999999999999999999764 6889999999999999999999998763 46889999999999886665
Q ss_pred ch-----hHHHhhhhhhhhHHHhhhhhcCCceEEeC-CeEEEEeCCCCCCCCCHHH
Q 023842 133 FY-----DECKRRFNVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLKNLDQ 182 (276)
Q Consensus 133 f~-----~e~~~~~~~~~~~~~~~~~~~lPl~~~i~-~~~l~vHaGi~~~~~~~~~ 182 (276)
+. +...+.+.....+.+.+|++++|+..... .++++||||++|.+ ++++
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w-~l~~ 131 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQW-DLQT 131 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCC-cHHH
Confidence 42 23333344566788999999999987654 36999999999998 3443
No 26
>PHA02239 putative protein phosphatase
Probab=99.93 E-value=2.6e-25 Score=196.70 Aligned_cols=155 Identities=24% Similarity=0.384 Sum_probs=111.5
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC--CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIY 131 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (276)
|++++|||||||++.|.++++.+... +.+.+||+|||||||++|.++++.++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 68999999999999999999987543 468899999999999999999999988753 456899999999998765321
Q ss_pred cc-----h---------hHHHhhhh-------------------------------hhhhHHHhhhhhcCCceEEeCCeE
Q 023842 132 GF-----Y---------DECKRRFN-------------------------------VRVWKTFTDCFNCLPVAALVDEKI 166 (276)
Q Consensus 132 ~f-----~---------~e~~~~~~-------------------------------~~~~~~~~~~~~~lPl~~~i~~~~ 166 (276)
.. . .+....|+ ...+..+..|+++||+....+ ++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~-~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKED-KY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEEC-CE
Confidence 00 0 01111221 012345566999999998765 59
Q ss_pred EEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHH
Q 023842 167 LCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVV 230 (276)
Q Consensus 167 l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~ 230 (276)
+|||||+.|... +++ +...+++|.|. . .+...|..++||||++.
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~~g~~vV~GHTp~~ 202 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRKDGFTYVCGHTPTD 202 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCCCCcEEEECCCCCC
Confidence 999999988753 332 12368999995 2 23345566677777663
No 27
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=4.1e-25 Score=197.55 Aligned_cols=122 Identities=24% Similarity=0.401 Sum_probs=99.3
Q ss_pred eeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccch
Q 023842 56 IKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (276)
Q Consensus 56 i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 134 (276)
++||||||||+++|+++|+++++. +.+++||+||||||||+|++|++++++++ .++++|+||||.++++..++..
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999986 46899999999999999999999999875 4799999999999887655432
Q ss_pred h-----HHHhhhhhhhhHHHhhhhhcCCceEEeCC-eEEEEeCCCCCCCCCHHH
Q 023842 135 D-----ECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQ 182 (276)
Q Consensus 135 ~-----e~~~~~~~~~~~~~~~~~~~lPl~~~i~~-~~l~vHaGi~~~~~~~~~ 182 (276)
. ...+.+.....+.+.+|++++|++..+++ ++++||||++|.+ ++++
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w-~~~~ 129 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQW-SIEQ 129 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCC-CHHH
Confidence 1 11111223345678899999999988764 7999999999988 4443
No 28
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=1.5e-25 Score=196.19 Aligned_cols=116 Identities=25% Similarity=0.315 Sum_probs=89.3
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhc
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIY 131 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (276)
.++++||||||||+++|+++|+.+++. ..+++|||||+|||||+|.+|++++.+ .++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHH
Confidence 359999999999999999999999886 568899999999999999999999864 2578999999999886432
Q ss_pred cchh--------HHHhhh---hhhhhHHHhhhhhcCCceEEeC---CeEEEEeCCCC
Q 023842 132 GFYD--------ECKRRF---NVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 174 (276)
Q Consensus 132 ~f~~--------e~~~~~---~~~~~~~~~~~~~~lPl~~~i~---~~~l~vHaGi~ 174 (276)
+-.. +....+ ..+.+..+.+|+++||+...+. +++++||||++
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 1100 000011 1234456678999999987543 46999999984
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.91 E-value=3.2e-24 Score=193.16 Aligned_cols=149 Identities=23% Similarity=0.317 Sum_probs=107.9
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC------CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCC-cEEEcCCCcccch
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP------PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKE-NFFLLRGNHECAS 126 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~------~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~-~v~~lrGNHE~~~ 126 (276)
.++++||||||+++.|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 36999999999999999999875432 2457999999999999999999999999887775 6899999999887
Q ss_pred hhhhcc---------ch------------------------------------------------------hHHHhhhh-
Q 023842 127 INRIYG---------FY------------------------------------------------------DECKRRFN- 142 (276)
Q Consensus 127 ~~~~~~---------f~------------------------------------------------------~e~~~~~~- 142 (276)
+.-... |. .+..+.|+
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 642111 00 01111221
Q ss_pred --------hhhhHHHhhhhhcCCceEEeCCeE-------------EEEeCCCCCCCCCHHHHhhhc-CCCCCCCcchhhh
Q 023842 143 --------VRVWKTFTDCFNCLPVAALVDEKI-------------LCMHGGLSPDLKNLDQIRNIA-RPVDVPDQGLLCD 200 (276)
Q Consensus 143 --------~~~~~~~~~~~~~lPl~~~i~~~~-------------l~vHaGi~~~~~~~~~i~~i~-r~~~~~~~~~~~d 200 (276)
.++.+...+|++.||.....++ + +|||||+.|....-+|...+. +....+. .+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~~~~-~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHEEDD-VCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEEeCc-ccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----cc
Confidence 2344567899999999977553 6 999999999986556655432 2222222 38
Q ss_pred hhcCCCC
Q 023842 201 LLWADPD 207 (276)
Q Consensus 201 llWsdp~ 207 (276)
++|.+..
T Consensus 237 ~l~~R~~ 243 (304)
T cd07421 237 PLSGRKN 243 (304)
T ss_pred ccccchh
Confidence 8888864
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.90 E-value=5.1e-24 Score=184.95 Aligned_cols=142 Identities=24% Similarity=0.338 Sum_probs=100.9
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (276)
+|++||||||||+.+|+++++.+++. ..+.++++||+||||+++.++++++.+ .++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 57999999999999999999998875 468899999999999999999998864 36899999999998875433
Q ss_pred c--hhHHHhhh---------hhhhhHHHhhhhhcCCceEEeC---CeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchh
Q 023842 133 F--YDECKRRF---------NVRVWKTFTDCFNCLPVAALVD---EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLL 198 (276)
Q Consensus 133 f--~~e~~~~~---------~~~~~~~~~~~~~~lPl~~~i~---~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~ 198 (276)
. ..+..... ...+++.+.+|+++||+...++ .++++||||+++.. ....+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~-~~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDD-WSDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcch-hhhhhhc-----cccCcccc
Confidence 1 11111111 1124556788999999998764 36999999986543 1111100 01122334
Q ss_pred hhhhcCCCC
Q 023842 199 CDLLWADPD 207 (276)
Q Consensus 199 ~dllWsdp~ 207 (276)
.+++|+++.
T Consensus 149 ~~~~w~~~~ 157 (207)
T cd07424 149 EELLWSRTR 157 (207)
T ss_pred eeeeeccch
Confidence 678898765
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.87 E-value=2.6e-22 Score=175.87 Aligned_cols=115 Identities=22% Similarity=0.290 Sum_probs=85.9
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (276)
.|++||||||||+++|+++|+.+.+. ..+++||+||+|||||+|.++++++.+ .++++|+||||.++++....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998865 457899999999999999999998853 36899999999998864311
Q ss_pred ch-hH-------HHhhhh---hhhhHHHhhhhhcCCceEEeC---CeEEEEeCCCC
Q 023842 133 FY-DE-------CKRRFN---VRVWKTFTDCFNCLPVAALVD---EKILCMHGGLS 174 (276)
Q Consensus 133 f~-~e-------~~~~~~---~~~~~~~~~~~~~lPl~~~i~---~~~l~vHaGi~ 174 (276)
-. .. ....+. .........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 00 000011 112234456899999987653 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.47 E-value=6.8e-13 Score=106.75 Aligned_cols=159 Identities=25% Similarity=0.289 Sum_probs=100.8
Q ss_pred CceeEEeCCCCCHHHH----HHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHH--HHHhhhcCCcEEEcCCCcccchh
Q 023842 54 APIKICGDVHGQFSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLL--LAYKVKYKENFFLLRGNHECASI 127 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l----~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l--~~lk~~~p~~v~~lrGNHE~~~~ 127 (276)
+|+++|||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 5899999999999987 34444444456688999999999999887776654 34444566789999999999876
Q ss_pred hhhccchhHHHhh----------------------------------hhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCC
Q 023842 128 NRIYGFYDECKRR----------------------------------FNVRVWKTFTDCFNCLPVAALVDEKILCMHGGL 173 (276)
Q Consensus 128 ~~~~~f~~e~~~~----------------------------------~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi 173 (276)
............. ...........+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 5322211111100 000111122222222333334455799999998
Q ss_pred CCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccC
Q 023842 174 SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQIL 248 (276)
Q Consensus 174 ~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~ 248 (276)
.+........ .....+...+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 7653211111 12245678899999999999999999853
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.25 E-value=6.9e-11 Score=97.38 Aligned_cols=83 Identities=27% Similarity=0.365 Sum_probs=62.4
Q ss_pred ceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccch
Q 023842 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (276)
Q Consensus 55 ~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 134 (276)
|+.++||+||+...+.++++.+.. .+.++++||+++++..+. + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 588999999999999999998654 688999999999998765 1 123468999999998532
Q ss_pred hHHHhhhhhhhhHHHhhhhhcCCceEEe--C-CeEEEEeCCCC
Q 023842 135 DECKRRFNVRVWKTFTDCFNCLPVAALV--D-EKILCMHGGLS 174 (276)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~lPl~~~i--~-~~~l~vHaGi~ 174 (276)
++.+|....+ + .+++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 2345543322 3 37999999764
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.24 E-value=2.6e-11 Score=103.08 Aligned_cols=69 Identities=22% Similarity=0.331 Sum_probs=56.0
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCC--------cHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ--------SIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~--------s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
||+.++||+||++.+++++++.+...+.+.++++||++|+|+. +.++++.+..+ ...+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 6899999999999999999988755667899999999999873 45666665433 34699999999975
Q ss_pred h
Q 023842 126 S 126 (276)
Q Consensus 126 ~ 126 (276)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.20 E-value=1e-10 Score=97.09 Aligned_cols=63 Identities=17% Similarity=0.150 Sum_probs=49.6
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
|++.++||+||++.+++.+++..... ..+.++++||++ +.+++..+..+. ..+++++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 68999999999998887776665554 568899999998 467777765432 3599999999984
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.16 E-value=1e-10 Score=95.64 Aligned_cols=131 Identities=24% Similarity=0.339 Sum_probs=84.4
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 133 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 133 (276)
||++++||+|++.+++.++++.+ ...+.+|++||+++ ..++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 78999999999999999999987 34678899999999 37777766443 59999999997653321100
Q ss_pred hhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCc
Q 023842 134 YDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGW 213 (276)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 213 (276)
.. +....... ....+++++|+.+...
T Consensus 69 ----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------- 94 (156)
T PF12850_consen 69 ----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------- 94 (156)
T ss_dssp ----------CS------SHSEEEEE-ETTEEEEEESSTSSSS-------------------------------------
T ss_pred ----------cc------cccceeee-ecCCeEEEECCCCccc-------------------------------------
Confidence 00 11111111 1244799999976430
Q ss_pred ccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcccceecc
Q 023842 214 GENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKKGKVGF 259 (276)
Q Consensus 214 ~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~~~~ 259 (276)
..+.+.+.+.+...++++++.||.-...-.+....-+
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~~~~~~ 131 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQVFKIGGIHV 131 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEEEEETTEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceEEEECCEEE
Confidence 1334556677778999999999988766554333333
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.04 E-value=1.8e-09 Score=95.53 Aligned_cols=63 Identities=25% Similarity=0.352 Sum_probs=46.0
Q ss_pred ceeEEeCCCCCHHHHH-HHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842 55 PIKICGDVHGQFSDLL-RLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 127 (276)
Q Consensus 55 ~i~viGDIHG~~~~l~-~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (276)
+|+++|||||++.... +.++. ...+.++++||+++ .+.+++..+.++ +..+++++||||.+..
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~---~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHL---LQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYD 65 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhc---cCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCccccc
Confidence 6899999999987643 23333 23478999999986 456777766544 3358999999998653
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.03 E-value=1.9e-09 Score=87.09 Aligned_cols=118 Identities=19% Similarity=0.222 Sum_probs=78.6
Q ss_pred ceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcH--HHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842 55 PIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--ETICLLLAYKVKYKENFFLLRGNHECASINRIYG 132 (276)
Q Consensus 55 ~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~--evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (276)
++.++||+||++. .....+.+.+|++||+++++..+. +.++++..++ . ..++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 5899999999987 122345678999999999886432 2344443321 1 236789999996411
Q ss_pred chhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCC
Q 023842 133 FYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEG 212 (276)
Q Consensus 133 f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 212 (276)
.-+.+++++|+.+.+.. +..+.
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----------------------~~~~~-------- 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----------------------DLVSS-------- 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----------------------ccccc--------
Confidence 11346999999653211 00000
Q ss_pred cccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 213 WGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 213 ~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
....|...+.+++++.+.++++.||.....+..
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 113577888999999999999999999987654
No 39
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.91 E-value=1e-08 Score=87.16 Aligned_cols=125 Identities=19% Similarity=0.273 Sum_probs=81.8
Q ss_pred ceeEEeCCC-CCHH-----HHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhh
Q 023842 55 PIKICGDVH-GQFS-----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (276)
Q Consensus 55 ~i~viGDIH-G~~~-----~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (276)
+|.||||+| |... .+.++++. .+.+.++.+||+++ .++++++..+. ..+++++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 5533 34555543 34578999999976 77777765542 25899999999742
Q ss_pred hhccchhHHHhhhhhhhhHHHhhhhhcCCceEE--eC-CeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCC
Q 023842 129 RIYGFYDECKRRFNVRVWKTFTDCFNCLPVAAL--VD-EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWAD 205 (276)
Q Consensus 129 ~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~--i~-~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsd 205 (276)
.+|.... ++ .+++++||..-...
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~~~---------------------------- 92 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVVPW---------------------------- 92 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCCCC----------------------------
Confidence 2343322 23 38999998521100
Q ss_pred CCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcccceeccCCCCCCCCCC
Q 023842 206 PDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKKGKVGFGNNMLRPGTP 269 (276)
Q Consensus 206 p~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~~~~~~~~~~~~~~ 269 (276)
...+.+.++.+..+.+++|.||+....-+... |.-++-||..
T Consensus 93 ------------------~~~~~~~~~~~~~~~dvii~GHTH~p~~~~~~----g~~viNPGSv 134 (178)
T cd07394 93 ------------------GDPDSLAALQRQLDVDILISGHTHKFEAFEHE----GKFFINPGSA 134 (178)
T ss_pred ------------------CCHHHHHHHHHhcCCCEEEECCCCcceEEEEC----CEEEEECCCC
Confidence 02344566667788999999999987654443 4556677765
No 40
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.87 E-value=2.4e-08 Score=77.77 Aligned_cols=117 Identities=26% Similarity=0.411 Sum_probs=84.1
Q ss_pred eEEeCCCCCHHHHHHHH--HhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccch
Q 023842 57 KICGDVHGQFSDLLRLF--EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY 134 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il--~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 134 (276)
+++||+|+......... +.......+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999888765 33334555788999999999988777654422233335567999999999
Q ss_pred hHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcc
Q 023842 135 DECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWG 214 (276)
Q Consensus 135 ~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~ 214 (276)
++++|+.+.+....... . .
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~---------------------~------~--- 88 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSP---------------------D------E--- 88 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhcc---------------------c------c---
Confidence 89999988653210000 0 0
Q ss_pred cCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 215 ENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 215 ~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
......+...+.+.+..+++.||........
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0156778888899999999999998877665
No 41
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.84 E-value=2.5e-08 Score=83.89 Aligned_cols=66 Identities=24% Similarity=0.277 Sum_probs=46.9
Q ss_pred eeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCc-HHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842 56 IKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-IETICLLLAYKVKYKENFFLLRGNHECASI 127 (276)
Q Consensus 56 i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s-~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (276)
|+++||+||++..+.. ..+...+.+.+|++||+++++... .+.+..+.+ .+..++++.||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHHH
Confidence 5789999999999877 323334557899999999998763 333333322 34469999999997543
No 42
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.83 E-value=8e-09 Score=90.91 Aligned_cols=72 Identities=10% Similarity=0.164 Sum_probs=58.6
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
.+++.++||+||++..++++++.....+.+.+|++||++++|+...++..++..+.. .+..+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~-l~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGE-AHLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCceEEEcCCCChH
Confidence 478999999999999999999876545678899999999999777777666655542 334689999999985
No 43
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.75 E-value=2.2e-08 Score=83.51 Aligned_cols=67 Identities=25% Similarity=0.237 Sum_probs=47.4
Q ss_pred eeEEeCCCCCHHHHHHHH-HhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 56 IKICGDVHGQFSDLLRLF-EYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 56 i~viGDIHG~~~~l~~il-~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
+.++||+|++.......+ +.......+.++++||+++++..+..+. ++ . ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~-~-~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LL-L-ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HH-H-hhcCCccEEEeCCCcceE
Confidence 468999999988776655 2233345577899999999887665543 22 2 122445799999999986
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.68 E-value=1.4e-07 Score=83.78 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=48.5
Q ss_pred CceeEEeCCCCC------HHHHHHHHHhCCCCCCcceeeecCcccC-------CCCcHHHHHHHHHHhhhcCCcEEEcCC
Q 023842 54 APIKICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDR-------GKQSIETICLLLAYKVKYKENFFLLRG 120 (276)
Q Consensus 54 ~~i~viGDIHG~------~~~l~~il~~~~~~~~~~~vfLGD~VDr-------G~~s~evl~~l~~lk~~~p~~v~~lrG 120 (276)
|++++|||+|.. ...+.+.|+.. ....+.++++||++|. .+...++++.+..++. .+..++++.|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 689999999954 23455555432 2345789999999985 2234566777766653 2346999999
Q ss_pred Ccccch
Q 023842 121 NHECAS 126 (276)
Q Consensus 121 NHE~~~ 126 (276)
|||...
T Consensus 79 NHD~~~ 84 (241)
T PRK05340 79 NRDFLL 84 (241)
T ss_pred CCchhh
Confidence 999743
No 45
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.61 E-value=5.8e-07 Score=72.32 Aligned_cols=107 Identities=16% Similarity=0.150 Sum_probs=75.2
Q ss_pred eEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhH
Q 023842 57 KICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDE 136 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 136 (276)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..+ ....+++++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 4899999998888777665 45668899999983 3455555544 1224889999999
Q ss_pred HHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccC
Q 023842 137 CKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGEN 216 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~ 216 (276)
-+++++|+-+.+.. . .+
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-~------------------------~~----------- 73 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-D------------------------GE----------- 73 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-C------------------------cc-----------
Confidence 35899998532110 0 00
Q ss_pred CCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 217 DRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 217 ~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
....-|...+.+++++.+.++++.||......+.
T Consensus 74 ---~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 74 ---DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ---cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 0012466788899999999999999998777665
No 46
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.60 E-value=6.7e-07 Score=72.51 Aligned_cols=117 Identities=23% Similarity=0.256 Sum_probs=74.4
Q ss_pred eeEEeCCCCCHH------H----HHHHHHhCCCCCCcceeeecCcccCCCCc--HHHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842 56 IKICGDVHGQFS------D----LLRLFEYGGYPPEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 56 i~viGDIHG~~~------~----l~~il~~~~~~~~~~~vfLGD~VDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE 123 (276)
++.++|+|=... . |.++++.+.....+.++++||+++.+... .....++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 1 12244444444568899999999988642 12233333332111 26999999999
Q ss_pred cchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhc
Q 023842 124 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLW 203 (276)
Q Consensus 124 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllW 203 (276)
. +++.|..+.+.....
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~~----------------------- 95 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGSG----------------------- 95 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCccc-----------------------
Confidence 7 888998775421000
Q ss_pred CCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 204 ADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 204 sdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
... ..+.+.+.+++++.++++++.||.-......
T Consensus 96 ----------~~~------~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 96 ----------RER------LLDAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ----------ccc------CCCHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 000 0156778889999999999999998776554
No 47
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.53 E-value=5.4e-07 Score=76.17 Aligned_cols=134 Identities=18% Similarity=0.187 Sum_probs=90.3
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF 133 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 133 (276)
|++.|+||.|+...+..+..+.......+.+|.+||++..... .-+..- ...+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~--~~l~~~------~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL--DALEGG------LAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch--HHhhcc------cccceEEEEccCCCcccc-----
Confidence 7899999999999766666666555667889999999875432 111110 135799999999985432
Q ss_pred hhHHHhhhhhhhhHHHhhhhhcCCce--EEeC-CeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCC
Q 023842 134 YDECKRRFNVRVWKTFTDCFNCLPVA--ALVD-EKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI 210 (276)
Q Consensus 134 ~~e~~~~~~~~~~~~~~~~~~~lPl~--~~i~-~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~ 210 (276)
..+|-. ..++ -+++++||..-.-.
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~--------------------------------- 95 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFVK--------------------------------- 95 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccccc---------------------------------
Confidence 122222 2334 48999999653210
Q ss_pred CCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcccceeccCCCCCCCCCCC
Q 023842 211 EGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKKGKVGFGNNMLRPGTPP 270 (276)
Q Consensus 211 ~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~~~~~~~~~~~~~~~ 270 (276)
.....+..+-+..+.+++|.||+.....++...+- .+-||.+-
T Consensus 96 -------------~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~~~i~----~vNPGS~s 138 (172)
T COG0622 96 -------------TDLSLLEYLAKELGADVLIFGHTHKPVAEKVGGIL----LVNPGSVS 138 (172)
T ss_pred -------------cCHHHHHHHHHhcCCCEEEECCCCcccEEEECCEE----EEcCCCcC
Confidence 12344666777778999999999998888877543 45577654
No 48
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.38 E-value=6.1e-07 Score=81.09 Aligned_cols=71 Identities=21% Similarity=0.094 Sum_probs=51.6
Q ss_pred cCceeEEeCCCCC----HHHHHHHHHhCCCCCCcceeeecCcccCC--CCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 53 EAPIKICGDVHGQ----FSDLLRLFEYGGYPPEANYLFLGDYVDRG--KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 53 ~~~i~viGDIHG~----~~~l~~il~~~~~~~~~~~vfLGD~VDrG--~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
+++++++||+|.. ...+.++++.+.....+.++++||++|++ ....++.+.+..++.. ..++++.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 3689999999976 55677777765555667889999999954 2334455566666532 3599999999974
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.38 E-value=1.4e-06 Score=76.92 Aligned_cols=68 Identities=12% Similarity=0.125 Sum_probs=43.2
Q ss_pred eeEEeCCCCCH------HHHHHHHHhCCCCCCcceeeecCcccCC-----CC--cHHHHHHHHHHhhhcCCcEEEcCCCc
Q 023842 56 IKICGDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRG-----KQ--SIETICLLLAYKVKYKENFFLLRGNH 122 (276)
Q Consensus 56 i~viGDIHG~~------~~l~~il~~~~~~~~~~~vfLGD~VDrG-----~~--s~evl~~l~~lk~~~p~~v~~lrGNH 122 (276)
++++||+|... ..+.+.+.... ...+.++++||++|.. +. ..++.+.+..++. .+..++++.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 37899999542 23444444322 1457899999999952 11 1345555555542 245799999999
Q ss_pred ccc
Q 023842 123 ECA 125 (276)
Q Consensus 123 E~~ 125 (276)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 974
No 50
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.33 E-value=8.1e-07 Score=77.13 Aligned_cols=72 Identities=25% Similarity=0.181 Sum_probs=52.8
Q ss_pred cCceeEEeCCCCCHH----HHHHHHHhCCCCCCcceeeecCcccCCCCcH-HHHHHHHHHhhhcCCcEEEcCCCcccch
Q 023842 53 EAPIKICGDVHGQFS----DLLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLLLAYKVKYKENFFLLRGNHECAS 126 (276)
Q Consensus 53 ~~~i~viGDIHG~~~----~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~-evl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (276)
.++++++||+|.... .+.++++.+.....+.++++||++|.+.... .+..++..+. .+..++++.||||...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 368999999998743 6777777665555678889999999987764 4445444332 3346899999999854
No 51
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.32 E-value=2.8e-06 Score=74.59 Aligned_cols=69 Identities=20% Similarity=0.184 Sum_probs=45.7
Q ss_pred ceeEEeCCCCC------------HHHHHHHHHhCCCC--CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCC
Q 023842 55 PIKICGDVHGQ------------FSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRG 120 (276)
Q Consensus 55 ~i~viGDIHG~------------~~~l~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrG 120 (276)
|++++||+|=. ...++++++.+... ..+-+|++||+++.|... ..+.+.+.....+-.+++++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 58899999944 34677777765443 557789999999987532 122222221223456899999
Q ss_pred Ccccc
Q 023842 121 NHECA 125 (276)
Q Consensus 121 NHE~~ 125 (276)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 52
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.29 E-value=2e-05 Score=67.65 Aligned_cols=70 Identities=13% Similarity=0.052 Sum_probs=44.6
Q ss_pred CceeEEeCCCCCHH------------HHHHHHHhCCCCCCcceeeecCcccCCCCc---HHHHHHHHHHhhhcCCcEEEc
Q 023842 54 APIKICGDVHGQFS------------DLLRLFEYGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKENFFLL 118 (276)
Q Consensus 54 ~~i~viGDIHG~~~------------~l~~il~~~~~~~~~~~vfLGD~VDrG~~s---~evl~~l~~lk~~~p~~v~~l 118 (276)
.++++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 57999999995222 122222222233457899999999977653 555555544333334568999
Q ss_pred CCCcc
Q 023842 119 RGNHE 123 (276)
Q Consensus 119 rGNHE 123 (276)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 53
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.20 E-value=2.6e-06 Score=75.40 Aligned_cols=68 Identities=21% Similarity=0.167 Sum_probs=49.3
Q ss_pred ceeEEeCCCCCH------HHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 55 PIKICGDVHGQF------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 55 ~i~viGDIHG~~------~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
++.++||+|.++ ..+.++++.+.....+.+|++||++++.+.+.+++..+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 588999999763 23556666554445678999999999876666666555442 334699999999975
No 54
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.17 E-value=8.9e-06 Score=70.96 Aligned_cols=70 Identities=21% Similarity=0.202 Sum_probs=42.4
Q ss_pred ceeEEeCCCC----CHHHH----HHHHHhCCCCCCcceeeecCcccCCCCcHH--HH-HHHHHHhhhcCCcEEEcCCCcc
Q 023842 55 PIKICGDVHG----QFSDL----LRLFEYGGYPPEANYLFLGDYVDRGKQSIE--TI-CLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 55 ~i~viGDIHG----~~~~l----~~il~~~~~~~~~~~vfLGD~VDrG~~s~e--vl-~~l~~lk~~~p~~v~~lrGNHE 123 (276)
+++++||+|- ....+ ..+.+.+.....+.+|++||+++.+....+ .+ ..+..+. ..+-.+++++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 5889999994 22333 333444333445778899999999984332 22 2222222 12235889999999
Q ss_pred cc
Q 023842 124 CA 125 (276)
Q Consensus 124 ~~ 125 (276)
..
T Consensus 81 ~~ 82 (214)
T cd07399 81 LV 82 (214)
T ss_pred ch
Confidence 53
No 55
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.11 E-value=4.6e-05 Score=68.84 Aligned_cols=71 Identities=15% Similarity=0.083 Sum_probs=47.7
Q ss_pred cCceeEEeCCCC------------CHHHHHHHHHhCCC--CCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEc
Q 023842 53 EAPIKICGDVHG------------QFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 118 (276)
Q Consensus 53 ~~~i~viGDIHG------------~~~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~l 118 (276)
+++++.|+|+|= ..+.|.++++.+.. +..+-+|+.||+++.|. .+-+..+.+.-...+..++++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 478999999991 24667777776532 23577889999999874 222333333222344569999
Q ss_pred CCCcccc
Q 023842 119 RGNHECA 125 (276)
Q Consensus 119 rGNHE~~ 125 (276)
.||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999973
No 56
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.06 E-value=0.00012 Score=63.83 Aligned_cols=175 Identities=17% Similarity=0.169 Sum_probs=97.1
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcc--cCCCCcHHHHHH--HHHHhhhcCCcEEEcCCCcccchhh
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYV--DRGKQSIETICL--LLAYKVKYKENFFLLRGNHECASIN 128 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~V--DrG~~s~evl~~--l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (276)
.|++..++|+||..+.+.+++..+.....+.+|+.||+. +.|+.-... +. +..++ .+.-.+++++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~-~~~~~e~l~-~~~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAE-ELNKLEALK-ELGIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHH-hhhHHHHHH-hcCCeEEEEcCCCChHHHH
Confidence 589999999999999999999887766778899999999 877643322 22 23333 2445799999999987654
Q ss_pred hhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEe-CCCCCCC------CCHHHHhhhcCCCCCCCcchh-hh
Q 023842 129 RIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMH-GGLSPDL------KNLDQIRNIARPVDVPDQGLL-CD 200 (276)
Q Consensus 129 ~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vH-aGi~~~~------~~~~~i~~i~r~~~~~~~~~~-~d 200 (276)
... ...+..+ .+-...+++ +.++= ||..|.. -+.++|....+..-....... --
T Consensus 81 ~~l-------~~~~~~v----------~~~v~~i~~-~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il 142 (226)
T COG2129 81 DVL-------KNAGVNV----------HGRVVEIGG-YGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNIL 142 (226)
T ss_pred HHH-------Hhccccc----------ccceEEecC-cEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEE
Confidence 210 0000000 011223333 43333 5554432 123333332211100000000 00
Q ss_pred hhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCC
Q 023842 201 LLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKAS 251 (276)
Q Consensus 201 llWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~ 251 (276)
++..-|....-. ++.| ..-.|..+++++.++.+-.+.+.||=.-..|
T Consensus 143 ~~HaPP~gt~~d---~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 143 LTHAPPYGTLLD---TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred EecCCCCCcccc---CCCC-ccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 112222211111 2223 2456999999999999999999998554333
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.05 E-value=8.8e-06 Score=72.92 Aligned_cols=72 Identities=21% Similarity=0.211 Sum_probs=48.8
Q ss_pred CceeEEeCCCC-C-----------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHH----HHHHHHhhhcCCcEEE
Q 023842 54 APIKICGDVHG-Q-----------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI----CLLLAYKVKYKENFFL 117 (276)
Q Consensus 54 ~~i~viGDIHG-~-----------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl----~~l~~lk~~~p~~v~~ 117 (276)
|+++.++|+|- . ...|.++++.+.....+.+|+.||++|+...+.+.. .++..|+...+-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 68999999993 2 234555655544445678999999999886554432 3344443322246999
Q ss_pred cCCCcccc
Q 023842 118 LRGNHECA 125 (276)
Q Consensus 118 lrGNHE~~ 125 (276)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 58
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=98.05 E-value=5.1e-06 Score=66.24 Aligned_cols=129 Identities=38% Similarity=0.623 Sum_probs=97.3
Q ss_pred hhhccchhHHHhhhhhh-hhHH---HhhhhhcCCceEEeCC-eEEEEeCCCCCCC-CCHHHHhhhcCCC--CCCCcchhh
Q 023842 128 NRIYGFYDECKRRFNVR-VWKT---FTDCFNCLPVAALVDE-KILCMHGGLSPDL-KNLDQIRNIARPV--DVPDQGLLC 199 (276)
Q Consensus 128 ~~~~~f~~e~~~~~~~~-~~~~---~~~~~~~lPl~~~i~~-~~l~vHaGi~~~~-~~~~~i~~i~r~~--~~~~~~~~~ 199 (276)
...+++.+++...+... .|.. ..++|+.+|+.+.... .++|.|+++++.. ..+++++...|.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 34455666655555433 4555 8999999999988877 8999999999865 5777777776655 455556666
Q ss_pred hhhcCCCCCC-CCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCccccee
Q 023842 200 DLLWADPDKD-IEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEKKGKV 257 (276)
Q Consensus 200 dllWsdp~~~-~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~~ 257 (276)
+.+|+++... ...|.+.++|....+ ++.+..|...+..+.+.++|+.++-.+.-...
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~ 141 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFG 141 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeC
Confidence 7799998763 577888888887777 78888999888877799999998887765544
No 59
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.04 E-value=8.8e-05 Score=66.30 Aligned_cols=71 Identities=11% Similarity=-0.022 Sum_probs=43.6
Q ss_pred ceeEEeCCCCCH----------------HHHHHHHHhCCCC--CCcceeeecCcccCCCCcH---HHHHHHHH-Hhhh-c
Q 023842 55 PIKICGDVHGQF----------------SDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSI---ETICLLLA-YKVK-Y 111 (276)
Q Consensus 55 ~i~viGDIHG~~----------------~~l~~il~~~~~~--~~~~~vfLGD~VDrG~~s~---evl~~l~~-lk~~-~ 111 (276)
+++++||+|-.. ..++++++.+... ..+.+|++||+++.|.... +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 578899999653 2345555554332 4567888999999887542 11222222 1111 1
Q ss_pred CCcEEEcCCCcccc
Q 023842 112 KENFFLLRGNHECA 125 (276)
Q Consensus 112 p~~v~~lrGNHE~~ 125 (276)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.02 E-value=6.3e-05 Score=66.38 Aligned_cols=68 Identities=25% Similarity=0.153 Sum_probs=40.1
Q ss_pred eeEEeCCCCC--------------HHHHHHHHHhCC--CCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcC
Q 023842 56 IKICGDVHGQ--------------FSDLLRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR 119 (276)
Q Consensus 56 i~viGDIHG~--------------~~~l~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lr 119 (276)
+++++|+|-. .+-+.++.+... .++.|-+|+.||+++++... +....+..++. .+..++++.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~-~~~~~l~~l~~-l~~~v~~V~ 78 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLE-EAKLDLAWIDA-LPGTKVLLK 78 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChH-HHHHHHHHHHh-CCCCeEEEe
Confidence 5789999955 122233333211 13567888999999877532 22222222222 233589999
Q ss_pred CCcccc
Q 023842 120 GNHECA 125 (276)
Q Consensus 120 GNHE~~ 125 (276)
||||.+
T Consensus 79 GNHD~~ 84 (232)
T cd07393 79 GNHDYW 84 (232)
T ss_pred CCcccc
Confidence 999974
No 61
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.01 E-value=1.5e-05 Score=71.82 Aligned_cols=73 Identities=21% Similarity=0.200 Sum_probs=49.4
Q ss_pred ceeEEeCCC--C-----------CHHHHHHHHHhCCCCCCcceeeecCcccCCCC-cHHHHHHHHHHhhhcCCcEEEcCC
Q 023842 55 PIKICGDVH--G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ-SIETICLLLAYKVKYKENFFLLRG 120 (276)
Q Consensus 55 ~i~viGDIH--G-----------~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~-s~evl~~l~~lk~~~p~~v~~lrG 120 (276)
|+.+|||+| . ....+.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++++.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24667777777654456789999999998863 223333333332223346999999
Q ss_pred Ccccchh
Q 023842 121 NHECASI 127 (276)
Q Consensus 121 NHE~~~~ 127 (276)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 62
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.98 E-value=1.8e-05 Score=66.59 Aligned_cols=59 Identities=19% Similarity=0.117 Sum_probs=34.7
Q ss_pred HHHHHHhCCCCCCcceeeecCcccCCCCcH-HHHHHH-HHHhhhcCCcEEEcCCCcccchh
Q 023842 69 LLRLFEYGGYPPEANYLFLGDYVDRGKQSI-ETICLL-LAYKVKYKENFFLLRGNHECASI 127 (276)
Q Consensus 69 l~~il~~~~~~~~~~~vfLGD~VDrG~~s~-evl~~l-~~lk~~~p~~v~~lrGNHE~~~~ 127 (276)
+.++.+.+...+.+.+|++||+++....+. +....+ .......+-.+++++||||....
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~~ 90 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGLP 90 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccchh
Confidence 344444444445688999999998654332 222221 11112244579999999998643
No 63
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.97 E-value=1.2e-05 Score=74.96 Aligned_cols=72 Identities=24% Similarity=0.365 Sum_probs=48.9
Q ss_pred CceeEEeCCC-C-----------CHHHHHHHHHhCCCCCCcceeeecCcccCC-CCcHHHHHHHHH--Hhh--hcCCcEE
Q 023842 54 APIKICGDVH-G-----------QFSDLLRLFEYGGYPPEANYLFLGDYVDRG-KQSIETICLLLA--YKV--KYKENFF 116 (276)
Q Consensus 54 ~~i~viGDIH-G-----------~~~~l~~il~~~~~~~~~~~vfLGD~VDrG-~~s~evl~~l~~--lk~--~~p~~v~ 116 (276)
||++.+||+| | ....|.++++.+.....+.+|++||++|+. +.+.+++.++.. ++. ..+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 7899999999 3 234556666555555568899999999985 445555444433 111 2334699
Q ss_pred EcCCCcccc
Q 023842 117 LLRGNHECA 125 (276)
Q Consensus 117 ~lrGNHE~~ 125 (276)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 64
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.90 E-value=3e-05 Score=76.06 Aligned_cols=114 Identities=17% Similarity=0.194 Sum_probs=60.7
Q ss_pred cCceeEEeCCC-CCH----HHHHHHHHhCC---------CCCCcceeeecCcccC-CCCc---------------HHHHH
Q 023842 53 EAPIKICGDVH-GQF----SDLLRLFEYGG---------YPPEANYLFLGDYVDR-GKQS---------------IETIC 102 (276)
Q Consensus 53 ~~~i~viGDIH-G~~----~~l~~il~~~~---------~~~~~~~vfLGD~VDr-G~~s---------------~evl~ 102 (276)
+.++++|||+| |.. ..+..+++.+. ....+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46799999999 652 23444444332 1223679999999994 3211 12334
Q ss_pred HHHHHhhhcCCcEEEcCCCcccchhhhhc-cchhHHHhhhhhhhhHHHhhhhhcCCceEEeCC-eEEEEeCCC
Q 023842 103 LLLAYKVKYKENFFLLRGNHECASINRIY-GFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGL 173 (276)
Q Consensus 103 ~l~~lk~~~p~~v~~lrGNHE~~~~~~~~-~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~-~~l~vHaGi 173 (276)
+|..+. ..-.+++++||||........ .+... +...+...-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~----l~~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEE----IRSLFPEHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHH----HHHhcCcCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 444432 233699999999976432111 11111 100011112334444 65444444 789999864
No 65
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.87 E-value=3.3e-05 Score=66.66 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHcCCCeEEEecccCCCCcccc
Q 023842 225 GADKVVEFLQKHDLDLICRAHQILKASEKKG 255 (276)
Q Consensus 225 G~~~~~~fl~~~~l~~iirgHe~~~~~~~~~ 255 (276)
....+.+.++..+++.+|.||.....-.+..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~ 207 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHELD 207 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEEEC
Confidence 3455667778899999999999877655544
No 66
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.82 E-value=3.5e-05 Score=66.49 Aligned_cols=74 Identities=24% Similarity=0.299 Sum_probs=49.6
Q ss_pred ceeEEeCCC-CC--------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhc---CCcEE
Q 023842 55 PIKICGDVH-GQ--------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKY---KENFF 116 (276)
Q Consensus 55 ~i~viGDIH-G~--------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~---p~~v~ 116 (276)
|++.++|+| |. +..|.++++.+.....+.+|++||+++....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 32 2246666666555556789999999998775555444433332222 44689
Q ss_pred EcCCCcccchhh
Q 023842 117 LLRGNHECASIN 128 (276)
Q Consensus 117 ~lrGNHE~~~~~ 128 (276)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999986543
No 67
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.70 E-value=0.0011 Score=54.89 Aligned_cols=147 Identities=16% Similarity=0.132 Sum_probs=86.1
Q ss_pred ceeEEeCCCC------------CHHHHHHH-HHhC--CCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcC
Q 023842 55 PIKICGDVHG------------QFSDLLRL-FEYG--GYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR 119 (276)
Q Consensus 55 ~i~viGDIHG------------~~~~l~~i-l~~~--~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lr 119 (276)
.++++||.|= +.+....+ +... -..|++.+.+|||+.-.-....+..+.+-+ -+.+.++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Iler----LnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILER----LNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHH----cCCcEEEee
Confidence 3789999993 23333332 2221 135678899999998655544444444333 367899999
Q ss_pred CCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhh
Q 023842 120 GNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLC 199 (276)
Q Consensus 120 GNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~ 199 (276)
||||-.--....+| ....+.|+.+- .-+.+++++|=-- +++
T Consensus 81 GNhDk~~~~~~~~~-------------~~svq~f~~ie---~dg~~~~LsHyP~-~~~---------------------- 121 (186)
T COG4186 81 GNHDKCHPMYRHAY-------------FDSVQAFQRIE---WDGEDVYLSHYPR-PGQ---------------------- 121 (186)
T ss_pred CCCCCCcccccchh-------------hHHHHHHHhee---ECCeEEEEEeCCC-CCC----------------------
Confidence 99997543221111 11122233322 2245788888632 211
Q ss_pred hhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecc---cCCCCcccceeccCCCCCCCC
Q 023842 200 DLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQ---ILKASEKKGKVGFGNNMLRPG 267 (276)
Q Consensus 200 dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe---~~~~~~~~~~~~~~~~~~~~~ 267 (276)
.-| | ..++.--.++++.++|.||- .++++.++.+|+.--+-++|-
T Consensus 122 ----~~~------------------~-~~~r~~y~~~~~~llIHGH~H~~~~kp~p~qidvgVEa~glKPv 169 (186)
T COG4186 122 ----DHP------------------G-MESRFDYLRLRVPLLIHGHLHSQFPKPGPGQIDVGVEAWGLKPV 169 (186)
T ss_pred ----CCc------------------c-hhhhHHHHhccCCeEEeccccccccCCCCceEEeeeEeecCccc
Confidence 000 0 12333445678889999984 578888888888877878774
No 68
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.70 E-value=6.7e-05 Score=62.89 Aligned_cols=67 Identities=25% Similarity=0.354 Sum_probs=44.0
Q ss_pred eeEEeCCCCCHHHH---------------HHHHHhCC--CCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEc
Q 023842 56 IKICGDVHGQFSDL---------------LRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLL 118 (276)
Q Consensus 56 i~viGDIHG~~~~l---------------~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~l 118 (276)
+++|||+|=..... .++++... ..+.+.+|++||+++++..+.. +.++.+ .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 47899999554432 22333321 2345889999999999986543 444433 23469999
Q ss_pred CCCcccchh
Q 023842 119 RGNHECASI 127 (276)
Q Consensus 119 rGNHE~~~~ 127 (276)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997644
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.69 E-value=0.00011 Score=64.87 Aligned_cols=69 Identities=17% Similarity=0.184 Sum_probs=43.5
Q ss_pred CceeEEeCCC-CCHHH----------------HHHHHHhCCCCCCcceeeecCcccCCCCc---HHHHHHHHHHhhhcCC
Q 023842 54 APIKICGDVH-GQFSD----------------LLRLFEYGGYPPEANYLFLGDYVDRGKQS---IETICLLLAYKVKYKE 113 (276)
Q Consensus 54 ~~i~viGDIH-G~~~~----------------l~~il~~~~~~~~~~~vfLGD~VDrG~~s---~evl~~l~~lk~~~p~ 113 (276)
.++.||+|+| |--.. |.++.+.+.....+.+|++||+++..... .++.+++.. ...
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~----~~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEV----TFR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHh----cCC
Confidence 6799999999 53222 22233333334458899999999765542 222333332 224
Q ss_pred cEEEcCCCcccch
Q 023842 114 NFFLLRGNHECAS 126 (276)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (276)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 70
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.65 E-value=0.00012 Score=69.97 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=56.8
Q ss_pred cCceeEEeCCCCC------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhh----------
Q 023842 53 EAPIKICGDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVK---------- 110 (276)
Q Consensus 53 ~~~i~viGDIHG~------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~---------- 110 (276)
.+|+++++|+|-. +.+|.++++.+.....|-+|+.||++|+..-|.+++..++++-.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 4789999999943 567788888776666788899999999999898887665544322
Q ss_pred --------------------------cCCcEEEcCCCcccch
Q 023842 111 --------------------------YKENFFLLRGNHECAS 126 (276)
Q Consensus 111 --------------------------~p~~v~~lrGNHE~~~ 126 (276)
..-.|++|-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999964
No 71
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.62 E-value=0.00012 Score=66.07 Aligned_cols=70 Identities=19% Similarity=0.290 Sum_probs=44.5
Q ss_pred eeEEeCCCCCHHHHHHHHHh---CCCCCCcceeeecCcccCCCCc-HHHH----------HHHHHH--hhhcCCcEEEcC
Q 023842 56 IKICGDVHGQFSDLLRLFEY---GGYPPEANYLFLGDYVDRGKQS-IETI----------CLLLAY--KVKYKENFFLLR 119 (276)
Q Consensus 56 i~viGDIHG~~~~l~~il~~---~~~~~~~~~vfLGD~VDrG~~s-~evl----------~~l~~l--k~~~p~~v~~lr 119 (276)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+..+ .+.+ ++.--+ ....|--+++|-
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 68999999999999765443 2234568899999996544332 2211 111110 222455579999
Q ss_pred CCcccc
Q 023842 120 GNHECA 125 (276)
Q Consensus 120 GNHE~~ 125 (276)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 72
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.60 E-value=7.8e-05 Score=61.91 Aligned_cols=48 Identities=25% Similarity=0.255 Sum_probs=30.1
Q ss_pred CCCcceeeecCcccCCCCc-HHHH-HHHHHHhhh---c-CCcEEEcCCCcccch
Q 023842 79 PPEANYLFLGDYVDRGKQS-IETI-CLLLAYKVK---Y-KENFFLLRGNHECAS 126 (276)
Q Consensus 79 ~~~~~~vfLGD~VDrG~~s-~evl-~~l~~lk~~---~-p~~v~~lrGNHE~~~ 126 (276)
...+.+|++||+++.+..+ .+.. ..+..++.. . +-.++++.||||...
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 3457899999999987643 2222 222222222 1 246999999999854
No 73
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.59 E-value=0.00023 Score=63.66 Aligned_cols=73 Identities=18% Similarity=0.154 Sum_probs=52.1
Q ss_pred CceeEEeCCCCC------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHh--hhcCCcEEEcCCCcccc
Q 023842 54 APIKICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYK--VKYKENFFLLRGNHECA 125 (276)
Q Consensus 54 ~~i~viGDIHG~------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk--~~~p~~v~~lrGNHE~~ 125 (276)
++++.|+|+|-. ...+.++++.+...+.|-+|+.||+.+.|. .. -.+.+..+- ...+..+++++||||..
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~-~~-~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE-PE-EYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC-HH-HHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 578999999976 445566677777666688999999999953 22 222222222 24667799999999998
Q ss_pred hhh
Q 023842 126 SIN 128 (276)
Q Consensus 126 ~~~ 128 (276)
...
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 765
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.52 E-value=0.00015 Score=69.43 Aligned_cols=72 Identities=19% Similarity=0.187 Sum_probs=46.7
Q ss_pred CceeEEeCCCCC--------HHH----HHHHHHhCCCCCCcceeeecCcccCCCCcHHHH----HHHHHHhhhcCCcEEE
Q 023842 54 APIKICGDVHGQ--------FSD----LLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI----CLLLAYKVKYKENFFL 117 (276)
Q Consensus 54 ~~i~viGDIHG~--------~~~----l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl----~~l~~lk~~~p~~v~~ 117 (276)
|+++.++|+|-. ..+ +..+++.+.....+.+|+.||++|++..+.... .++..++. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 689999999932 111 334444444455688999999999986554332 23333432 2346999
Q ss_pred cCCCcccch
Q 023842 118 LRGNHECAS 126 (276)
Q Consensus 118 lrGNHE~~~ 126 (276)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 75
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.38 E-value=0.001 Score=58.66 Aligned_cols=175 Identities=16% Similarity=0.203 Sum_probs=89.6
Q ss_pred eEEeCCCCC------HHHHHHHHHhCCCCCCcceeeecCccc--CCCC--c---HHHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842 57 KICGDVHGQ------FSDLLRLFEYGGYPPEANYLFLGDYVD--RGKQ--S---IETICLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 57 ~viGDIHG~------~~~l~~il~~~~~~~~~~~vfLGD~VD--rG~~--s---~evl~~l~~lk~~~p~~v~~lrGNHE 123 (276)
+.|||+|=. .+.|.+.|+... +..+.++++||++| .|.+ + .+|...|..+. +...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 468999954 344455555533 35688999999997 2322 2 34444454432 35568999999999
Q ss_pred cchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceE---EeCCeEEEEeCCCCCCCC------------CHHHHhhhcC
Q 023842 124 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAA---LVDEKILCMHGGLSPDLK------------NLDQIRNIAR 188 (276)
Q Consensus 124 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~---~i~~~~l~vHaGi~~~~~------------~~~~i~~i~r 188 (276)
.. +...+ +. ... -+.-+|-.. ..+.+++++||-.-.... .+.+..-+..
T Consensus 79 fl-l~~~f----------~~----~~g-~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FL-LGKRF----------AQ----EAG-GMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HH-HHHHH----------Hh----hcC-ceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 54 32111 00 000 012223222 235689999996532110 0011111111
Q ss_pred CCCCCCcchhhhhhcCCCCCCCCCcccCCCCc---EEecCHHHHHHHHHHcCCCeEEEecccCCCCcccce
Q 023842 189 PVDVPDQGLLCDLLWADPDKDIEGWGENDRGV---SYTFGADKVVEFLQKHDLDLICRAHQILKASEKKGK 256 (276)
Q Consensus 189 ~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~---~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~ 256 (276)
|+. .. .-+..-+|+.. .|....... -.-.....+.+-+++++++.+|.||....+...-..
T Consensus 143 ~l~-~R-~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~ 206 (237)
T COG2908 143 PLR-VR-RRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG 206 (237)
T ss_pred HHH-HH-HHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC
Confidence 110 00 01122244442 111111000 012356678888899999999999998776655443
No 76
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.32 E-value=0.00043 Score=62.06 Aligned_cols=71 Identities=23% Similarity=0.185 Sum_probs=41.9
Q ss_pred eeEEeCCCCCH------HHH-HHHHHhCCCCCCcceeeecCcccCCCCc--------H---HHHHHHHHHhhhcCCcEEE
Q 023842 56 IKICGDVHGQF------SDL-LRLFEYGGYPPEANYLFLGDYVDRGKQS--------I---ETICLLLAYKVKYKENFFL 117 (276)
Q Consensus 56 i~viGDIHG~~------~~l-~~il~~~~~~~~~~~vfLGD~VDrG~~s--------~---evl~~l~~lk~~~p~~v~~ 117 (276)
++.++|+|-.. ... ..+++.+.....+.+|++||++|+.... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 56789999521 112 3344444444567889999999976521 1 1222222222222457899
Q ss_pred cCCCcccch
Q 023842 118 LRGNHECAS 126 (276)
Q Consensus 118 lrGNHE~~~ 126 (276)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999953
No 77
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.17 E-value=0.00011 Score=70.19 Aligned_cols=233 Identities=13% Similarity=-0.012 Sum_probs=156.2
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceeecC----ceeEEeCCCCCHHHHHHHHHhCCCCCC-cceeeecCcccCCCCcHHH
Q 023842 26 QLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIET 100 (276)
Q Consensus 26 ~l~~~~~~~l~~~~~~~l~~ep~~~~~~~----~i~viGDIHG~~~~l~~il~~~~~~~~-~~~vfLGD~VDrG~~s~ev 100 (276)
-|...++..++.-+.++++-+||...... -.+.++|.||.+.++.++++.- +.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 57788889999999999999998777632 3789999999999999888753 333 3488999999999999999
Q ss_pred HHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhh---hhhHHHhhhhhcCC-ceEEeCCeEEEEeCCCCC-
Q 023842 101 ICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNV---RVWKTFTDCFNCLP-VAALVDEKILCMHGGLSP- 175 (276)
Q Consensus 101 l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~---~~~~~~~~~~~~lP-l~~~i~~~~l~vHaGi~~- 175 (276)
+..+...+...|++..+.|++||.-.+-..++|..+....++. .+...+.. ..++ +...+.+.+ +-+.-+.-
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~--~~~~~i~~~y~g~~-le~~kvt~e 168 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDE--EDMDLIESDYSGPV-LEDHKVTLE 168 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccc--ccccccccccCCcc-cccchhhHH
Confidence 9999999999999999999999998887777776554444321 11111111 1111 333333211 11111100
Q ss_pred -----------------C--CCCHHHHhhhcCCCCC-CCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHH
Q 023842 176 -----------------D--LKNLDQIRNIARPVDV-PDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQK 235 (276)
Q Consensus 176 -----------------~--~~~~~~i~~i~r~~~~-~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~ 235 (276)
. ..-+++..++.+-+.. .+...-.+..|+.+......+.+..++.....++..+..|+..
T Consensus 169 ~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfn 248 (476)
T KOG0376|consen 169 FVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFN 248 (476)
T ss_pred HHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCccccccc
Confidence 0 0011111111111100 0111345667777765545555666666777788889999999
Q ss_pred cCCCeEEEecccCCCCcccceeccCCCC
Q 023842 236 HDLDLICRAHQILKASEKKGKVGFGNNM 263 (276)
Q Consensus 236 ~~l~~iirgHe~~~~~~~~~~~~~~~~~ 263 (276)
.++.-+.+.+.-+....+..+.++=||.
T Consensus 249 gdfv~rgs~s~e~~~~~~~~kl~~pn~~ 276 (476)
T KOG0376|consen 249 GDFVDRGSWSVEVILTLFAFKLLYPNNF 276 (476)
T ss_pred CceeeecccceeeeeeehhhcccCCcce
Confidence 9999999999999999998888887774
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.10 E-value=0.00071 Score=59.96 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=38.5
Q ss_pred eEEeCCC--CCH---HHHHHHHHhCC-CC----CCcceeeecCcccCCCC------------c----HHHHHHHHHHhhh
Q 023842 57 KICGDVH--GQF---SDLLRLFEYGG-YP----PEANYLFLGDYVDRGKQ------------S----IETICLLLAYKVK 110 (276)
Q Consensus 57 ~viGDIH--G~~---~~l~~il~~~~-~~----~~~~~vfLGD~VDrG~~------------s----~evl~~l~~lk~~ 110 (276)
++|||+| +.. ..+..+++.+. .. ..+.+|++||++|+... . ..+..++.++.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 331 22333443322 21 23788999999997310 0 11222333232
Q ss_pred cCCcEEEcCCCcccch
Q 023842 111 YKENFFLLRGNHECAS 126 (276)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (276)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2346999999999853
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.06 E-value=0.0015 Score=59.18 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=42.1
Q ss_pred CceeEEeCCCC----CHHHHHHHHHhCCCCCCcceeeecCcccCCCCc-----HHHHHHHHHHhhhcCCcEEEcCCCccc
Q 023842 54 APIKICGDVHG----QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHEC 124 (276)
Q Consensus 54 ~~i~viGDIHG----~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (276)
-+++|+||.|. ....+.++.+. ....+-+|++||+++.+... -..+..+-.+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 47899999995 34444444443 23456788899999644332 12222222222 12358999999998
Q ss_pred chh
Q 023842 125 ASI 127 (276)
Q Consensus 125 ~~~ 127 (276)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 644
No 80
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.05 E-value=0.001 Score=60.62 Aligned_cols=73 Identities=22% Similarity=0.161 Sum_probs=49.3
Q ss_pred CceeEEeCCCCCHHH--HHHHHHhCCCCCCcceeeecCcccC-C-CCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhh
Q 023842 54 APIKICGDVHGQFSD--LLRLFEYGGYPPEANYLFLGDYVDR-G-KQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (276)
Q Consensus 54 ~~i~viGDIHG~~~~--l~~il~~~~~~~~~~~vfLGD~VDr-G-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (276)
-+|+-++|+|-+... ..+.+........+-+++.|||+|+ . +....++..+..|+ .|-.++++.||||...-.
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVDR 121 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEeccccccccc
Confidence 369999999987655 2233333333333778889999995 4 44455555565554 566799999999886543
No 81
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.97 E-value=0.0034 Score=55.47 Aligned_cols=107 Identities=18% Similarity=0.213 Sum_probs=62.1
Q ss_pred CceeecCceeEEeCCCCCHHHHH----------------HHHH-hCCCCCCcceeeecCcccCCCC-----cHHHHHHHH
Q 023842 48 NLLELEAPIKICGDVHGQFSDLL----------------RLFE-YGGYPPEANYLFLGDYVDRGKQ-----SIETICLLL 105 (276)
Q Consensus 48 ~~~~~~~~i~viGDIHG~~~~l~----------------~il~-~~~~~~~~~~vfLGD~VDrG~~-----s~evl~~l~ 105 (276)
.+.-...++.||+|+|=-+.... +.++ .+.....+++|++||+-.-.+. ..++-. ++
T Consensus 14 ~~~l~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~-f~ 92 (235)
T COG1407 14 VLYLPLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVRE-FL 92 (235)
T ss_pred eeEeccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHH-HH
Confidence 33344678999999996555433 2222 1223345789999999865443 233333 33
Q ss_pred HHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCC
Q 023842 106 AYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDL 177 (276)
Q Consensus 106 ~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~ 177 (276)
++.... .+++++||||...-....++. ...++.. .+ ++++++||--.+..
T Consensus 93 ~~~~~~--evi~i~GNHD~~i~~~~~~~~------------------v~v~~~~-~i-~~~~~~HGh~~~~~ 142 (235)
T COG1407 93 ELLDER--EVIIIRGNHDNGIEEILPGFN------------------VEVVDEL-EI-GGLLFRHGHKEPEP 142 (235)
T ss_pred HHhccC--cEEEEeccCCCccccccccCC------------------ceeeeeE-Ee-cCEEEEeCCCCCcc
Confidence 332222 599999999986543222221 1223333 23 45999999766543
No 82
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.89 E-value=0.0024 Score=60.59 Aligned_cols=74 Identities=23% Similarity=0.204 Sum_probs=52.4
Q ss_pred CceeEEeCCCCC-------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcC---CcEEE
Q 023842 54 APIKICGDVHGQ-------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYK---ENFFL 117 (276)
Q Consensus 54 ~~i~viGDIHG~-------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p---~~v~~ 117 (276)
||++-++|.|=- +.+|..+++.+.-...|-+|+-||++|+..-|.+++..+...-.+.. =.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 688999999944 44555556655445557789999999999888777665544332222 26999
Q ss_pred cCCCcccchh
Q 023842 118 LRGNHECASI 127 (276)
Q Consensus 118 lrGNHE~~~~ 127 (276)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999998653
No 83
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.81 E-value=0.0023 Score=52.93 Aligned_cols=66 Identities=23% Similarity=0.331 Sum_probs=47.2
Q ss_pred eEEeCCCCCHHHHHHHHHhCCC--CCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842 57 KICGDVHGQFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (276)
.|+||+||+++.+.+-++.+.. .+-+-+|++||+..-...+-+. .-...=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~-~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEEL-EAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhH-HHHhcCCccCCCCEEEECCCCC
Confidence 4899999999999877765322 2347789999999866655333 3333334456667899999997
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.78 E-value=0.0025 Score=53.76 Aligned_cols=48 Identities=23% Similarity=0.263 Sum_probs=30.8
Q ss_pred CCCcceeeecCcccCCCCcH--H---HHHHHHHHhhhc-----CCcEEEcCCCcccch
Q 023842 79 PPEANYLFLGDYVDRGKQSI--E---TICLLLAYKVKY-----KENFFLLRGNHECAS 126 (276)
Q Consensus 79 ~~~~~~vfLGD~VDrG~~s~--e---vl~~l~~lk~~~-----p~~v~~lrGNHE~~~ 126 (276)
...+.+|++||++|.+.... + .+..+.++.... .-.++++.||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 44578999999999887432 2 222232221111 346999999999864
No 85
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.75 E-value=0.0024 Score=55.04 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=33.6
Q ss_pred CCcceeeecCcccCCCCc--HHHHHHHHHHhhhcC----CcEEEcCCCcccc
Q 023842 80 PEANYLFLGDYVDRGKQS--IETICLLLAYKVKYK----ENFFLLRGNHECA 125 (276)
Q Consensus 80 ~~~~~vfLGD~VDrG~~s--~evl~~l~~lk~~~p----~~v~~lrGNHE~~ 125 (276)
..+.+|||||++|.|+.+ .+..+.+.+++..++ ..+++|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457899999999999864 335666655554322 3688999999975
No 86
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.65 E-value=0.0028 Score=56.16 Aligned_cols=66 Identities=30% Similarity=0.319 Sum_probs=43.2
Q ss_pred ceeEEeCCCCCH---------HHHHHHHHhCCCCCCc-ceeeecCcccCCCCcH-----HHHHHHHHHhhhcCCcEEEcC
Q 023842 55 PIKICGDVHGQF---------SDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQSI-----ETICLLLAYKVKYKENFFLLR 119 (276)
Q Consensus 55 ~i~viGDIHG~~---------~~l~~il~~~~~~~~~-~~vfLGD~VDrG~~s~-----evl~~l~~lk~~~p~~v~~lr 119 (276)
+++.++|+||.+ ..+.+++++......+ -++..||+++..+.+. .+++.+-++ +-.+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 588999999876 5666777665443334 4566899999877643 455554433 2233 455
Q ss_pred CCcccc
Q 023842 120 GNHECA 125 (276)
Q Consensus 120 GNHE~~ 125 (276)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999964
No 87
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.56 E-value=0.06 Score=48.36 Aligned_cols=25 Identities=4% Similarity=-0.075 Sum_probs=21.2
Q ss_pred ecCHHHHHHHHHHcCCCeEEEeccc
Q 023842 223 TFGADKVVEFLQKHDLDLICRAHQI 247 (276)
Q Consensus 223 ~fG~~~~~~fl~~~~l~~iirgHe~ 247 (276)
+-..+.+...|++.+-.+|.-||+.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC
Confidence 3478899999999999999999654
No 88
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.51 E-value=0.002 Score=56.51 Aligned_cols=73 Identities=21% Similarity=0.223 Sum_probs=43.9
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHH--------------------------HHHHH
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETI--------------------------CLLLA 106 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl--------------------------~~l~~ 106 (276)
..+|..++|.||+++.+.++.+.+.-...|-+||+||++-....+.|-. .++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 4579999999999999999988765556688999999986554444433 33333
Q ss_pred HhhhcCCcEEEcCCCcccch
Q 023842 107 YKVKYKENFFLLRGNHECAS 126 (276)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~ 126 (276)
|. ..+-.+++|+||||...
T Consensus 85 L~-~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 85 LG-ELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HH-CC-SEEEEE--TTS-SH
T ss_pred HH-hcCCcEEEecCCCCchH
Confidence 32 24446899999999954
No 89
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.02 E-value=0.016 Score=44.23 Aligned_cols=44 Identities=18% Similarity=0.357 Sum_probs=35.0
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceee
Q 023842 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 52 (276)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~ 52 (276)
||.+.+.+|++.++..+ .|+...+..|+.++.++|+++|+++++
T Consensus 52 it~efv~~mie~FK~~K--------~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 52 ITLEFVKAMIEWFKNQK--------KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp --HHHHHHHHHHHHCT------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCHHHHHHHHHHHHhCC--------CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 57889999999999887 899999999999999999999999975
No 90
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.84 E-value=0.011 Score=53.28 Aligned_cols=66 Identities=21% Similarity=0.236 Sum_probs=39.6
Q ss_pred ceeEEeCCCCCH----------------HHHHHHHHhCCCCCCcceee-ecCcccCCCCc-----------HHHHHHHHH
Q 023842 55 PIKICGDVHGQF----------------SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQS-----------IETICLLLA 106 (276)
Q Consensus 55 ~i~viGDIHG~~----------------~~l~~il~~~~~~~~~~~vf-LGD~VDrG~~s-----------~evl~~l~~ 106 (276)
+|+.++|+||++ ..+..++++......+.+++ .||+++..+.+ ..+++.+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 33556666544333344444 79999866422 234455544
Q ss_pred HhhhcCCcEEEcCCCcccc
Q 023842 107 YKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~ 125 (276)
+. . . ++..||||..
T Consensus 82 ~g---~-d-~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y-D-AGTLGNHEFN 95 (277)
T ss_pred cC---C-C-EEeecccCcc
Confidence 32 2 3 4456999963
No 91
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.68 E-value=0.02 Score=49.34 Aligned_cols=68 Identities=18% Similarity=0.153 Sum_probs=41.7
Q ss_pred EeCCCCCHHHHHHHHHhCCC-CCCcceeeecCcccCCCCcHH-HHHHHHHHhhhc---------------------CCcE
Q 023842 59 CGDVHGQFSDLLRLFEYGGY-PPEANYLFLGDYVDRGKQSIE-TICLLLAYKVKY---------------------KENF 115 (276)
Q Consensus 59 iGDIHG~~~~l~~il~~~~~-~~~~~~vfLGD~VDrG~~s~e-vl~~l~~lk~~~---------------------p~~v 115 (276)
-=|++|+=.-|.++++.+-. -..+.++||||++|.|--+-+ --....+.+..+ ...+
T Consensus 22 rld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~ 101 (193)
T cd08164 22 RLDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPL 101 (193)
T ss_pred eehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceE
Confidence 34556776666777665433 345778999999998753322 223333333322 1356
Q ss_pred EEcCCCcccch
Q 023842 116 FLLRGNHECAS 126 (276)
Q Consensus 116 ~~lrGNHE~~~ 126 (276)
+.|.||||.-.
T Consensus 102 i~V~GNHDIG~ 112 (193)
T cd08164 102 INIAGNHDVGY 112 (193)
T ss_pred EEECCcccCCC
Confidence 89999999853
No 92
>PLN02533 probable purple acid phosphatase
Probab=95.64 E-value=0.014 Score=56.36 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=40.3
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcH--H-HHHHHHHHhhhcCCcEEEcCCCcccch
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSI--E-TICLLLAYKVKYKENFFLLRGNHECAS 126 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~--e-vl~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (276)
+-+++++||+|-. ......++.+.....+-++++||++.-+.... + -..++..+.... .++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 4579999999632 11223333333344567888999997543321 1 122222222112 4789999999853
No 93
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=95.46 E-value=0.22 Score=42.47 Aligned_cols=45 Identities=24% Similarity=0.332 Sum_probs=30.4
Q ss_pred CCCcceeeecCcc--cCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842 79 PPEANYLFLGDYV--DRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI 127 (276)
Q Consensus 79 ~~~~~~vfLGD~V--DrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (276)
.++|.+++-||+- -|=++..+-+.++-+ -|..=+++|||||.+.-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccc
Confidence 3455566679983 244455555666654 37778999999999864
No 94
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=95.34 E-value=0.025 Score=50.60 Aligned_cols=66 Identities=21% Similarity=0.160 Sum_probs=40.2
Q ss_pred ceeEEeCCCCCH----------HHHHHHHHhCCCCCCcceeeecCcccCCCCc-----HHHHHHHHHHhhhcCCcEEEcC
Q 023842 55 PIKICGDVHGQF----------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLR 119 (276)
Q Consensus 55 ~i~viGDIHG~~----------~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s-----~evl~~l~~lk~~~p~~v~~lr 119 (276)
+++-++|+||++ ..+..++++....+.+-++..||+++..+.+ ..+++.+-.+ .-.+ ...
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 578899999974 4456666655433444556689999876532 2333444332 2244 456
Q ss_pred CCcccc
Q 023842 120 GNHECA 125 (276)
Q Consensus 120 GNHE~~ 125 (276)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 95
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.90 E-value=0.052 Score=48.61 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=39.5
Q ss_pred ceeEEeCCCCC--H--HHHHHHHH-hCCCCCCcceeeecCcc-cCCCCcH------HHHHHHHHHhhhcCCcEEEcCCCc
Q 023842 55 PIKICGDVHGQ--F--SDLLRLFE-YGGYPPEANYLFLGDYV-DRGKQSI------ETICLLLAYKVKYKENFFLLRGNH 122 (276)
Q Consensus 55 ~i~viGDIHG~--~--~~l~~il~-~~~~~~~~~~vfLGD~V-DrG~~s~------evl~~l~~lk~~~p~~v~~lrGNH 122 (276)
+.+++||.=.. . ..+.+.+. .+.....+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998764 1 23333332 23224456789999997 5553221 222223221 11233689999999
Q ss_pred ccc
Q 023842 123 ECA 125 (276)
Q Consensus 123 E~~ 125 (276)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 96
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=94.89 E-value=0.025 Score=56.22 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=37.0
Q ss_pred cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhh
Q 023842 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (276)
Q Consensus 82 ~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (276)
+++-++||+.||||.+-.+++.|+.. .+|=+-.||||..++.
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMG 227 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMG 227 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHH
Confidence 77889999999999999999999864 3788999999987764
No 97
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.86 E-value=0.055 Score=50.51 Aligned_cols=73 Identities=25% Similarity=0.357 Sum_probs=46.3
Q ss_pred CceeEEeCCCCCHHHHHH---HHHhCCCCCCcceeeecCccc-CC---CCcHHH---HHHHH------HHhhhcCCcEEE
Q 023842 54 APIKICGDVHGQFSDLLR---LFEYGGYPPEANYLFLGDYVD-RG---KQSIET---ICLLL------AYKVKYKENFFL 117 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~---il~~~~~~~~~~~vfLGD~VD-rG---~~s~ev---l~~l~------~lk~~~p~~v~~ 117 (276)
|||.|=|=-||.++.+-+ ..++.|-.+-|.++++||+=. |. -.++.| ...|- .=....|--.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 689999999999999974 445555556788999999942 11 112111 11111 112224445688
Q ss_pred cCCCcccch
Q 023842 118 LRGNHECAS 126 (276)
Q Consensus 118 lrGNHE~~~ 126 (276)
|-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999864
No 98
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.71 E-value=0.045 Score=49.87 Aligned_cols=66 Identities=26% Similarity=0.265 Sum_probs=40.9
Q ss_pred ceeEEeCCCCCHH--------------HHHHHHHhCCCCC-CcceeeecCcccCCCC-c-----HHHHHHHHHHhhhcCC
Q 023842 55 PIKICGDVHGQFS--------------DLLRLFEYGGYPP-EANYLFLGDYVDRGKQ-S-----IETICLLLAYKVKYKE 113 (276)
Q Consensus 55 ~i~viGDIHG~~~--------------~l~~il~~~~~~~-~~~~vfLGD~VDrG~~-s-----~evl~~l~~lk~~~p~ 113 (276)
+++.++|+||++. .+..+++...... ..-++..||++...+. + ..+++.+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 5788999998854 3566666544333 3345568999976653 2 245555555432
Q ss_pred cEEEcCCCcccc
Q 023842 114 NFFLLRGNHECA 125 (276)
Q Consensus 114 ~v~~lrGNHE~~ 125 (276)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 34 455999964
No 99
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.73 E-value=0.089 Score=47.18 Aligned_cols=65 Identities=18% Similarity=0.175 Sum_probs=37.3
Q ss_pred ceeEEeCCCCCH----------------------HHHHHHHHhCCCC-CCcce-eeecCcccCCCCc-----HHHHHHHH
Q 023842 55 PIKICGDVHGQF----------------------SDLLRLFEYGGYP-PEANY-LFLGDYVDRGKQS-----IETICLLL 105 (276)
Q Consensus 55 ~i~viGDIHG~~----------------------~~l~~il~~~~~~-~~~~~-vfLGD~VDrG~~s-----~evl~~l~ 105 (276)
.++.++|+||++ ..+..++++.... ..+.+ +..||+++..+.+ ..++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 366788888874 3345555554333 33444 4589999876543 23444444
Q ss_pred HHhhhcCCcEEEcCCCcccc
Q 023842 106 AYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 106 ~lk~~~p~~v~~lrGNHE~~ 125 (276)
.+ +-.+. . ||||..
T Consensus 82 ~~----g~da~-~-GNHefd 95 (264)
T cd07411 82 AL----GVDAM-V-GHWEFT 95 (264)
T ss_pred hh----CCeEE-e-cccccc
Confidence 33 22333 3 999964
No 100
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=93.32 E-value=0.16 Score=46.14 Aligned_cols=66 Identities=18% Similarity=0.126 Sum_probs=38.0
Q ss_pred ceeEEeCCCCCH---------------------HHHHHHHHhCCCCCCcc-eeeecCcccCCCC-----cHHHHHHHHHH
Q 023842 55 PIKICGDVHGQF---------------------SDLLRLFEYGGYPPEAN-YLFLGDYVDRGKQ-----SIETICLLLAY 107 (276)
Q Consensus 55 ~i~viGDIHG~~---------------------~~l~~il~~~~~~~~~~-~vfLGD~VDrG~~-----s~evl~~l~~l 107 (276)
+++-++|+||++ ..+..+++.......+. ++-.||++...+. ...+++.+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999864 44555665543333333 3447999987653 23334444333
Q ss_pred hhhcCCcEEEcCCCcccc
Q 023842 108 KVKYKENFFLLRGNHECA 125 (276)
Q Consensus 108 k~~~p~~v~~lrGNHE~~ 125 (276)
. -.+.. .||||.-
T Consensus 82 g----~D~~~-lGNHefd 94 (281)
T cd07409 82 G----YDAMT-LGNHEFD 94 (281)
T ss_pred C----CCEEE-ecccccc
Confidence 2 24444 4999974
No 101
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=92.97 E-value=0.34 Score=45.09 Aligned_cols=48 Identities=21% Similarity=0.219 Sum_probs=29.9
Q ss_pred CCCCcceeeecCcccCCCCcHHHHHHH---HHHhhhcCCcEEEcCCCcccch
Q 023842 78 YPPEANYLFLGDYVDRGKQSIETICLL---LAYKVKYKENFFLLRGNHECAS 126 (276)
Q Consensus 78 ~~~~~~~vfLGD~VDrG~~s~evl~~l---~~lk~~~p~~v~~lrGNHE~~~ 126 (276)
....+-+||+||.|+. .........+ .+-.+.+.=-+..+.||||..-
T Consensus 98 sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred ccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 3456789999999986 4333332222 2222333335788999999864
No 102
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=92.71 E-value=0.2 Score=45.37 Aligned_cols=67 Identities=16% Similarity=0.135 Sum_probs=49.1
Q ss_pred CceeEEeCCCCC--HHHHHHHHHhCCCCC-CcceeeecCcccCC-CCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 54 APIKICGDVHGQ--FSDLLRLFEYGGYPP-EANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 54 ~~i~viGDIHG~--~~~l~~il~~~~~~~-~~~~vfLGD~VDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
|++.++|||=|. ...+...|..+.... .+-+|..||....| .-+.++.+.|.++- -+++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 689999999999 667777777654433 35566689999766 45788888887653 366666 999874
No 103
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=92.50 E-value=0.22 Score=45.16 Aligned_cols=70 Identities=21% Similarity=0.248 Sum_probs=40.9
Q ss_pred eEEeCCCCC---HHHHHHHHHhCCC--CCCcceeeecCcccCCCCcH--H-----HHH-HHHHHhhhcCC-cEEEcCCCc
Q 023842 57 KICGDVHGQ---FSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSI--E-----TIC-LLLAYKVKYKE-NFFLLRGNH 122 (276)
Q Consensus 57 ~viGDIHG~---~~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s~--e-----vl~-~l~~lk~~~p~-~v~~lrGNH 122 (276)
.-.|+-. | ...+..+++.+.. ++.+-+|+.||+++.+.... + ... +...++..+|. .++.+.|||
T Consensus 41 ~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 41 GPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred CCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 3345553 4 3445555554433 35677889999998876431 1 112 22223333443 699999999
Q ss_pred ccchh
Q 023842 123 ECASI 127 (276)
Q Consensus 123 E~~~~ 127 (276)
|..-.
T Consensus 120 D~~p~ 124 (296)
T cd00842 120 DSYPV 124 (296)
T ss_pred CCCcc
Confidence 98644
No 104
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=92.28 E-value=0.22 Score=44.57 Aligned_cols=64 Identities=23% Similarity=0.136 Sum_probs=40.1
Q ss_pred eeEEeCCC----------CCHHHHHHHHHhCCCCCCc-ceeeecCcccCCCC-----cHHHHHHHHHHhhhcCCcEEEcC
Q 023842 56 IKICGDVH----------GQFSDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQ-----SIETICLLLAYKVKYKENFFLLR 119 (276)
Q Consensus 56 i~viGDIH----------G~~~~l~~il~~~~~~~~~-~~vfLGD~VDrG~~-----s~evl~~l~~lk~~~p~~v~~lr 119 (276)
++-+.|+| |.+..+..++++......+ -++..||+++..+. ...+++.+-.+. --+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEee
Confidence 45556666 4567777787765543334 45558999987653 245555555443 235578
Q ss_pred CCccc
Q 023842 120 GNHEC 124 (276)
Q Consensus 120 GNHE~ 124 (276)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99996
No 105
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=91.97 E-value=0.27 Score=46.96 Aligned_cols=73 Identities=23% Similarity=0.380 Sum_probs=46.1
Q ss_pred CceeEEeCCC--CC---------HHH------HHHHHHhCCC-CCCcceeeecCcccCCCCc--HHHHHHHHHHhhhcCC
Q 023842 54 APIKICGDVH--GQ---------FSD------LLRLFEYGGY-PPEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKE 113 (276)
Q Consensus 54 ~~i~viGDIH--G~---------~~~------l~~il~~~~~-~~~~~~vfLGD~VDrG~~s--~evl~~l~~lk~~~p~ 113 (276)
-++.+|+|-| |+ ++. |.+.+...-+ -..+.++||||++|-|... -|--....+++..++.
T Consensus 49 ~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~ 128 (410)
T KOG3662|consen 49 TKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGR 128 (410)
T ss_pred eEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCC
Confidence 3688898876 31 222 2333433322 2346688899999988754 4444555556655654
Q ss_pred ----cEEEcCCCcccch
Q 023842 114 ----NFFLLRGNHECAS 126 (276)
Q Consensus 114 ----~v~~lrGNHE~~~ 126 (276)
.+..+.||||.-.
T Consensus 129 k~~~~~~~i~GNhDIGf 145 (410)
T KOG3662|consen 129 KGNIKVIYIAGNHDIGF 145 (410)
T ss_pred CCCCeeEEeCCcccccc
Confidence 5899999999743
No 106
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=91.78 E-value=0.18 Score=54.58 Aligned_cols=67 Identities=18% Similarity=0.138 Sum_probs=41.4
Q ss_pred CceeEEeCCCCCH---HHHHHHHHhCCCCCCcceee-ecCcccCCCCc-----HHHHHHHHHHhhhcCCcEEEcCCCccc
Q 023842 54 APIKICGDVHGQF---SDLLRLFEYGGYPPEANYLF-LGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHEC 124 (276)
Q Consensus 54 ~~i~viGDIHG~~---~~l~~il~~~~~~~~~~~vf-LGD~VDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (276)
-+++.++|+||.+ ..+..++++......+.+++ .||+++..+.+ ..+++.+-.+. --++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 3588999999874 44555555443323344444 79999877644 24455544432 22558899997
Q ss_pred c
Q 023842 125 A 125 (276)
Q Consensus 125 ~ 125 (276)
-
T Consensus 736 d 736 (1163)
T PRK09419 736 D 736 (1163)
T ss_pred c
Confidence 3
No 107
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.45 E-value=1.6 Score=36.10 Aligned_cols=62 Identities=23% Similarity=0.287 Sum_probs=45.5
Q ss_pred ceeEEeCCCC--CHHHHHHHHHhCCCCCC-cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 55 PIKICGDVHG--QFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 55 ~i~viGDIHG--~~~~l~~il~~~~~~~~-~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
-+.++||+|= ...+|-.-|+++-.|+. .+++++|++ -|.|++++|..+. ++++++||--|.-
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNl-----cs~e~~dylk~l~----~dvhiVrGeFD~~ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNL-----CSKESYDYLKTLS----SDVHIVRGEFDEN 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCc-----chHHHHHHHHhhC----CCcEEEecccCcc
Confidence 4689999993 44555555655555655 678899997 5889999987764 5799999987663
No 108
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=91.10 E-value=1.1 Score=43.50 Aligned_cols=113 Identities=20% Similarity=0.289 Sum_probs=57.9
Q ss_pred ceeEEeCCC-CCHHHHHH----HHHhCCCC----CCcce-eeecCcccCC------------CCcHHHHHHHHHHhhhcC
Q 023842 55 PIKICGDVH-GQFSDLLR----LFEYGGYP----PEANY-LFLGDYVDRG------------KQSIETICLLLAYKVKYK 112 (276)
Q Consensus 55 ~i~viGDIH-G~~~~l~~----il~~~~~~----~~~~~-vfLGD~VDrG------------~~s~evl~~l~~lk~~~p 112 (276)
.+.+++|+| |...-+.. .++-+.-+ +.-+| +..||.||.. .+..+-.+.+-.+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 478999999 44444433 33332222 12244 5579999932 122333333433333344
Q ss_pred C--cEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCC-eEEEEeC
Q 023842 113 E--NFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHG 171 (276)
Q Consensus 113 ~--~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~-~~l~vHa 171 (276)
. .+++.+||||..-.........+. ...++...+-.|=.=|....+++ .++..||
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~----~kslf~~~n~~~v~NP~~~~l~G~~vL~~hG 364 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPEL----IKSLFSLNNLLFVSNPALVSLHGVDVLIYHG 364 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchh----hcccccccceEecCCCcEEEECCEEEEEecC
Confidence 4 589999999987554322222221 11222222222233355555554 6788887
No 109
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=90.17 E-value=0.31 Score=44.29 Aligned_cols=66 Identities=20% Similarity=0.064 Sum_probs=35.6
Q ss_pred ceeEEeCCCCCHHH----------HHHHHHhCCC-----CCCcceeeecCcccCCCC-----cHHHHHHHHHHhhhcCCc
Q 023842 55 PIKICGDVHGQFSD----------LLRLFEYGGY-----PPEANYLFLGDYVDRGKQ-----SIETICLLLAYKVKYKEN 114 (276)
Q Consensus 55 ~i~viGDIHG~~~~----------l~~il~~~~~-----~~~~~~vfLGD~VDrG~~-----s~evl~~l~~lk~~~p~~ 114 (276)
+|+.++|+||++.. +..++++... .+..-++-.||.+...+. ...+++.+-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 47788999998533 3444443321 122334447999843332 233444444443 24
Q ss_pred EEEcCCCcccc
Q 023842 115 FFLLRGNHECA 125 (276)
Q Consensus 115 v~~lrGNHE~~ 125 (276)
+..+ ||||.-
T Consensus 78 a~~~-GNHEfD 87 (285)
T cd07405 78 AMAV-GNHEFD 87 (285)
T ss_pred EEee-cccccc
Confidence 4444 999964
No 110
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=89.51 E-value=0.36 Score=46.55 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=35.7
Q ss_pred cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhh
Q 023842 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN 128 (276)
Q Consensus 82 ~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (276)
+++=++||+.||||++-.+++.|..+ ..+-+-.||||..++.
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWmg 233 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWMG 233 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEee
Confidence 66778999999999999999999775 2678889999987653
No 111
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=89.29 E-value=0.59 Score=40.08 Aligned_cols=72 Identities=14% Similarity=0.104 Sum_probs=40.6
Q ss_pred eeEEeCCCCC-----HHHHHHHHHhCC-CCCCcceeeecCcccCCCCcH----------HHHHHHHHHhhh-----cCCc
Q 023842 56 IKICGDVHGQ-----FSDLLRLFEYGG-YPPEANYLFLGDYVDRGKQSI----------ETICLLLAYKVK-----YKEN 114 (276)
Q Consensus 56 i~viGDIHG~-----~~~l~~il~~~~-~~~~~~~vfLGD~VDrG~~s~----------evl~~l~~lk~~-----~p~~ 114 (276)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... .....+..+... ..-+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788888855 677788888776 555678999999999632221 111111111111 1237
Q ss_pred EEEcCCCcccchh
Q 023842 115 FFLLRGNHECASI 127 (276)
Q Consensus 115 v~~lrGNHE~~~~ 127 (276)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 112
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=87.25 E-value=1.2 Score=40.10 Aligned_cols=66 Identities=18% Similarity=0.150 Sum_probs=44.0
Q ss_pred ceeEEeCCCCCH--HHHHHHHHhCCCC-CCcceeeecCcccCC-CCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 55 PIKICGDVHGQF--SDLLRLFEYGGYP-PEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 55 ~i~viGDIHG~~--~~l~~il~~~~~~-~~~~~vfLGD~VDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
++.+||||=|.. ..+.+.|...... +.+-+|..||..--| .-+.++.+.|..+.. .++.+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 588999999984 3445555554322 234455579998766 367788888876643 56655 999764
No 113
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=85.35 E-value=0.96 Score=44.61 Aligned_cols=69 Identities=25% Similarity=0.258 Sum_probs=42.0
Q ss_pred cCceeEEeCCCCCHH------------HH---HHHHHhCCCCCCcc-eeeecCcccCCC------CcHHHHHHHHHHhhh
Q 023842 53 EAPIKICGDVHGQFS------------DL---LRLFEYGGYPPEAN-YLFLGDYVDRGK------QSIETICLLLAYKVK 110 (276)
Q Consensus 53 ~~~i~viGDIHG~~~------------~l---~~il~~~~~~~~~~-~vfLGD~VDrG~------~s~evl~~l~~lk~~ 110 (276)
+-+++-..|+||++. .+ ..++++........ +|=.||+++..+ ....++..|-.++.
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y- 104 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY- 104 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC-
Confidence 346888999999998 33 33333322222233 334899999833 33455666665542
Q ss_pred cCCcEEEcCCCcccch
Q 023842 111 YKENFFLLRGNHECAS 126 (276)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (276)
. ..-.||||.-.
T Consensus 105 ---D-a~tiGNHEFd~ 116 (517)
T COG0737 105 ---D-AMTLGNHEFDY 116 (517)
T ss_pred ---c-EEeeccccccc
Confidence 2 45679999854
No 114
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.04 E-value=1.6 Score=42.14 Aligned_cols=69 Identities=25% Similarity=0.399 Sum_probs=51.4
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCCC--CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCc
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGYP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNH 122 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~~--~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNH 122 (276)
+.+|.|+||+-|+++.|.+-.+.+... |-+-++++||+++-..++.|++.+...-+ .-|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 478999999999999998777665443 34778899999998778888877765432 3555567766655
No 115
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=83.77 E-value=1.4 Score=40.20 Aligned_cols=66 Identities=18% Similarity=0.113 Sum_probs=36.4
Q ss_pred ceeEEeCCCCCHHH-------------HHHH---HHh-CCCC-CCcceeeecCcccCCCCc-------HHHHHHHHHHhh
Q 023842 55 PIKICGDVHGQFSD-------------LLRL---FEY-GGYP-PEANYLFLGDYVDRGKQS-------IETICLLLAYKV 109 (276)
Q Consensus 55 ~i~viGDIHG~~~~-------------l~~i---l~~-~~~~-~~~~~vfLGD~VDrG~~s-------~evl~~l~~lk~ 109 (276)
+|+-+.|+||++.. +.++ ++. .... ++.-++..||.+..-+.+ ..+++++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 57888999998641 2222 221 1111 222344589999755332 23344444442
Q ss_pred hcCCcEEEcCCCcccc
Q 023842 110 KYKENFFLLRGNHECA 125 (276)
Q Consensus 110 ~~p~~v~~lrGNHE~~ 125 (276)
-=.+..||||.-
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 235678999994
No 116
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=83.68 E-value=1.5 Score=40.53 Aligned_cols=65 Identities=22% Similarity=0.098 Sum_probs=37.9
Q ss_pred ceeEEeCCCCCHH------HHHHHHHhCCC-----CCCcceeeecCcccCCCC-------------cHHHHHHHHHHhhh
Q 023842 55 PIKICGDVHGQFS------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQ-------------SIETICLLLAYKVK 110 (276)
Q Consensus 55 ~i~viGDIHG~~~------~l~~il~~~~~-----~~~~~~vfLGD~VDrG~~-------------s~evl~~l~~lk~~ 110 (276)
.|+-+.|+||++. .+..++++... .+..-++..||.+.-++. ...+++++-++..
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~- 80 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGV- 80 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCC-
Confidence 3677899999953 44344443221 223345558999875442 3345555555532
Q ss_pred cCCcEEEcCCCccc
Q 023842 111 YKENFFLLRGNHEC 124 (276)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (276)
=....||||.
T Consensus 81 ----Da~tlGNHEF 90 (313)
T cd08162 81 ----QAIALGNHEF 90 (313)
T ss_pred ----cEEecccccc
Confidence 2456899995
No 117
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.57 E-value=1.6 Score=44.55 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=41.8
Q ss_pred ecCceeEEeCCCCCHHH----------------HHHHHHhCCCC-CCcceeeecCcccCCCCcH-------------HHH
Q 023842 52 LEAPIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQSI-------------ETI 101 (276)
Q Consensus 52 ~~~~i~viGDIHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~-------------evl 101 (276)
..-+|+-..|+||++.. +..++++.... ++.-+|-.||.+...+.+- .++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45678899999998643 33344443222 2334555899998655421 255
Q ss_pred HHHHHHhhhcCCcEEEcCCCcccc
Q 023842 102 CLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
+.+-.|. -=....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 5555553 235678999963
No 118
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=82.25 E-value=1.5 Score=44.41 Aligned_cols=67 Identities=18% Similarity=0.083 Sum_probs=39.2
Q ss_pred CceeEEeCCCCCHHH----------------HHHHHHhCCCC-CCcceeeecCcccCCCCc-------------HHHHHH
Q 023842 54 APIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQS-------------IETICL 103 (276)
Q Consensus 54 ~~i~viGDIHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~VDrG~~s-------------~evl~~ 103 (276)
-+|+-..|+||++.. +..++++.... ++.-+|-.||.+...+.+ ..+++.
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 367888999999643 33444443222 233455589999855433 234555
Q ss_pred HHHHhhhcCCcEEEcCCCcccc
Q 023842 104 LLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 104 l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
+-.|. -=....||||.-
T Consensus 83 mN~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred HhhcC-----ccEEeccccccc
Confidence 54443 124677999953
No 119
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=82.16 E-value=1.5 Score=47.69 Aligned_cols=66 Identities=23% Similarity=0.193 Sum_probs=39.0
Q ss_pred CceeEEeCCCCCHH----------------HHHHHHHhCCCCCCcceee-ecCcccCCCC--------------cHHHHH
Q 023842 54 APIKICGDVHGQFS----------------DLLRLFEYGGYPPEANYLF-LGDYVDRGKQ--------------SIETIC 102 (276)
Q Consensus 54 ~~i~viGDIHG~~~----------------~l~~il~~~~~~~~~~~vf-LGD~VDrG~~--------------s~evl~ 102 (276)
-+|+-.+|+||++. .+..++++........+++ .||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 46889999999863 3344454433222334444 8999986651 123444
Q ss_pred HHHHHhhhcCCcEEEcCCCccc
Q 023842 103 LLLAYKVKYKENFFLLRGNHEC 124 (276)
Q Consensus 103 ~l~~lk~~~p~~v~~lrGNHE~ 124 (276)
.+-.+. -=....||||.
T Consensus 122 ~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHhhcC-----ccEEeeccccc
Confidence 444442 22456899996
No 120
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=76.10 E-value=25 Score=30.29 Aligned_cols=85 Identities=16% Similarity=0.260 Sum_probs=61.4
Q ss_pred cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccch----------------hHHHhhhhhhh
Q 023842 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFY----------------DECKRRFNVRV 145 (276)
Q Consensus 82 ~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~----------------~e~~~~~~~~~ 145 (276)
..+||+| -|...-|++.++-.++..+.++-+ +.|+-|.|..++...|. .|....|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4688887 477899999999999888877655 48999999887655442 12223333456
Q ss_pred hHHHhhhhhcCCceEEeCCeEEEEeC
Q 023842 146 WKTFTDCFNCLPVAALVDEKILCMHG 171 (276)
Q Consensus 146 ~~~~~~~~~~lPl~~~i~~~~l~vHa 171 (276)
+..+...+.++++...+...++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 67777777888888777666777766
No 121
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=76.09 E-value=3.2 Score=41.33 Aligned_cols=68 Identities=21% Similarity=0.070 Sum_probs=37.1
Q ss_pred cCceeEEeCCCCCHH----------HHHHHHHhCC-----CCCCcceeeecCcccCCCCc-----HHHHHHHHHHhhhcC
Q 023842 53 EAPIKICGDVHGQFS----------DLLRLFEYGG-----YPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYK 112 (276)
Q Consensus 53 ~~~i~viGDIHG~~~----------~l~~il~~~~-----~~~~~~~vfLGD~VDrG~~s-----~evl~~l~~lk~~~p 112 (276)
+-.|+-+.|+||++. .+..+++... ..+..-++..||.+...+.+ ..+++++-.+.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 346888999999874 2233343322 12333455579998643322 23344444432
Q ss_pred CcEEEcCCCcccc
Q 023842 113 ENFFLLRGNHECA 125 (276)
Q Consensus 113 ~~v~~lrGNHE~~ 125 (276)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 24554 4999964
No 122
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.82 E-value=3.4 Score=43.21 Aligned_cols=68 Identities=21% Similarity=0.115 Sum_probs=39.7
Q ss_pred cCceeEEeCCCCCHHH----------------HHHHHHhCCCC-CCcceeeecCcccCCCCc--------------HHHH
Q 023842 53 EAPIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQS--------------IETI 101 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~VDrG~~s--------------~evl 101 (276)
.-+|+-..|+||++.. +..++++.... ++.-+|-.||++..-+.+ ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 3468889999999643 22334433222 233455589999754432 1255
Q ss_pred HHHHHHhhhcCCcEEEcCCCcccc
Q 023842 102 CLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
+.|-.|. -=..-.||||.-
T Consensus 195 ~amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 195 AALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHHhccC-----CCEEEechhhcc
Confidence 5555543 225677999963
No 123
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=74.55 E-value=12 Score=34.20 Aligned_cols=73 Identities=19% Similarity=0.274 Sum_probs=47.7
Q ss_pred CceeEEeCCCCC----HHHHHHHHHhCC-CCC----CcceeeecCcccCC----CCc----HHHHHHHHHH-hhhcC---
Q 023842 54 APIKICGDVHGQ----FSDLLRLFEYGG-YPP----EANYLFLGDYVDRG----KQS----IETICLLLAY-KVKYK--- 112 (276)
Q Consensus 54 ~~i~viGDIHG~----~~~l~~il~~~~-~~~----~~~~vfLGD~VDrG----~~s----~evl~~l~~l-k~~~p--- 112 (276)
.+++|+||+|=+ +++|.++|+... ..+ ...+|++|+++-+. ..+ .+-++-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 468999999955 778888887652 212 34689999998653 222 2334444432 22344
Q ss_pred --CcEEEcCCCcccch
Q 023842 113 --ENFFLLRGNHECAS 126 (276)
Q Consensus 113 --~~v~~lrGNHE~~~ 126 (276)
.++++|+|-+|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 58999999999854
No 124
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=73.16 E-value=4 Score=37.07 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=55.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceee---------cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCC
Q 023842 26 QLTEAEIRQLCAASKEIFLSQPNLLEL---------EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQ 96 (276)
Q Consensus 26 ~l~~~~~~~l~~~~~~~l~~ep~~~~~---------~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~ 96 (276)
.++.+....-.+.++..-.-+|++-.+ ..+.+.|+|.|....... ..++.|.++.+||+..-|-
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~- 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL- 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-
Confidence 455555555544444444444533333 246899999999655433 2456677888999976553
Q ss_pred cHHHHHHHHHHhhhcC-CcEEEcCCCcccchhh
Q 023842 97 SIETICLLLAYKVKYK-ENFFLLRGNHECASIN 128 (276)
Q Consensus 97 s~evl~~l~~lk~~~p-~~v~~lrGNHE~~~~~ 128 (276)
+-||..+=-.+- ..| ..=+.|+||||..+-.
T Consensus 98 ~~ev~~fn~~~g-slph~yKIVIaGNHELtFd~ 129 (305)
T KOG3947|consen 98 PEEVIKFNEWLG-SLPHEYKIVIAGNHELTFDH 129 (305)
T ss_pred HHHHHhhhHHhc-cCcceeeEEEeeccceeecc
Confidence 455544422221 122 2346799999986543
No 125
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=72.48 E-value=5.6 Score=39.67 Aligned_cols=65 Identities=23% Similarity=0.100 Sum_probs=36.3
Q ss_pred eeEEeCCCCCHHH---------------------HHHHHHhCCC-CCCcceeeecCcccCCCCc-----HHHHHHHHHHh
Q 023842 56 IKICGDVHGQFSD---------------------LLRLFEYGGY-PPEANYLFLGDYVDRGKQS-----IETICLLLAYK 108 (276)
Q Consensus 56 i~viGDIHG~~~~---------------------l~~il~~~~~-~~~~~~vfLGD~VDrG~~s-----~evl~~l~~lk 108 (276)
|+-+.|+||++.. +..++++... .++.-++..||.+...+.+ ..+++++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887533 3334443322 2334455689998755432 33344444432
Q ss_pred hhcCCcEEEcCCCcccc
Q 023842 109 VKYKENFFLLRGNHECA 125 (276)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (276)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 236678999964
No 126
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=71.22 E-value=6.6 Score=37.58 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=40.4
Q ss_pred CceeEEeCCC-CCHHHHH--HHHHhC-CCCCCcceeeecCcccCCCCcH------HHHHHHHHHhh-hcCCcEEEcCCCc
Q 023842 54 APIKICGDVH-GQFSDLL--RLFEYG-GYPPEANYLFLGDYVDRGKQSI------ETICLLLAYKV-KYKENFFLLRGNH 122 (276)
Q Consensus 54 ~~i~viGDIH-G~~~~l~--~il~~~-~~~~~~~~vfLGD~VDrG~~s~------evl~~l~~lk~-~~p~~v~~lrGNH 122 (276)
-+.+++||-= |.+.... +.+... ...+.+-+|-+||-++.|..++ +.++.++.-.. ...-.++.+.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 4689999953 3332221 222222 1234456777999998776643 33444442211 0112589999999
Q ss_pred ccc
Q 023842 123 ECA 125 (276)
Q Consensus 123 E~~ 125 (276)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 127
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=70.52 E-value=17 Score=32.74 Aligned_cols=47 Identities=15% Similarity=0.241 Sum_probs=27.0
Q ss_pred cceeeecCcccCCCCc------------------HHHHHHHHHHhhhcC--CcEEEcCCCcccchhh
Q 023842 82 ANYLFLGDYVDRGKQS------------------IETICLLLAYKVKYK--ENFFLLRGNHECASIN 128 (276)
Q Consensus 82 ~~~vfLGD~VDrG~~s------------------~evl~~l~~lk~~~p--~~v~~lrGNHE~~~~~ 128 (276)
.++|+.||.|+.-... .+-+..+-.+-.+-+ -.|.+++||||-....
T Consensus 44 ~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~ 110 (257)
T cd07387 44 VRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHS 110 (257)
T ss_pred EEEEEECCcccccccccchhhhhhccccccchhhHHHHHHHHHHHHhhhcCCeEEECCCCCCccccc
Confidence 3688999999954321 222222222211112 2589999999986544
No 128
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.91 E-value=7.2 Score=40.64 Aligned_cols=67 Identities=18% Similarity=0.101 Sum_probs=38.4
Q ss_pred cCceeEEeCCCCCHHH----------------HHHHHHhCCCC-CCcceeeecCcccCCCCc------------------
Q 023842 53 EAPIKICGDVHGQFSD----------------LLRLFEYGGYP-PEANYLFLGDYVDRGKQS------------------ 97 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~----------------l~~il~~~~~~-~~~~~vfLGD~VDrG~~s------------------ 97 (276)
.-+|+-..|+||++.. +..++++.... ++.-+|-.||++-..+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4578999999999632 23334433222 233455589988533321
Q ss_pred -HHHHHHHHHHhhhcCCcEEEcCCCccc
Q 023842 98 -IETICLLLAYKVKYKENFFLLRGNHEC 124 (276)
Q Consensus 98 -~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (276)
..+++++-.|.. =....||||.
T Consensus 119 ~~p~i~~mN~lgy-----Da~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKY-----DVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCC-----CEEecccccc
Confidence 235555554432 2567799995
No 129
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=63.99 E-value=7.6 Score=37.67 Aligned_cols=26 Identities=12% Similarity=0.040 Sum_probs=21.5
Q ss_pred HHHHHHHHcCCCeEEEecccCCCCcc
Q 023842 228 KVVEFLQKHDLDLICRAHQILKASEK 253 (276)
Q Consensus 228 ~~~~fl~~~~l~~iirgHe~~~~~~~ 253 (276)
.++..+-++++++++-||..-=++..
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~ 348 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFC 348 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccc
Confidence 58999999999999999987555543
No 130
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=63.82 E-value=6.7 Score=39.51 Aligned_cols=23 Identities=13% Similarity=0.413 Sum_probs=20.7
Q ss_pred cCceeEEeCCCCCHHHHHHHHHh
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEY 75 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~ 75 (276)
.+.-.++|||||.+++|..+|+.
T Consensus 32 KGTEhF~SDlHGEyeAF~HiLrn 54 (640)
T PF06874_consen 32 KGTEHFMSDLHGEYEAFDHILRN 54 (640)
T ss_pred CCceEeeeccccchHHHHHHHHc
Confidence 57889999999999999999875
No 131
>PF14164 YqzH: YqzH-like protein
Probab=58.39 E-value=45 Score=23.49 Aligned_cols=47 Identities=23% Similarity=0.427 Sum_probs=36.0
Q ss_pred CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 023842 1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPN 48 (276)
Q Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~ 48 (276)
|++-.++.+|.+-+.-- +......+|++.+...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QY-g~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQY-GYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHh-CCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 67777888777666533 233455589999999999999999999985
No 132
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=41.38 E-value=33 Score=30.69 Aligned_cols=88 Identities=24% Similarity=0.321 Sum_probs=44.4
Q ss_pred cceeeecCccc-CCC---CcHHHHHHHHHHhhh-------cCCcEEEcCCCcccchhhhhccchhHHH-hhh-hhhhhHH
Q 023842 82 ANYLFLGDYVD-RGK---QSIETICLLLAYKVK-------YKENFFLLRGNHECASINRIYGFYDECK-RRF-NVRVWKT 148 (276)
Q Consensus 82 ~~~vfLGD~VD-rG~---~s~evl~~l~~lk~~-------~p~~v~~lrGNHE~~~~~~~~~f~~e~~-~~~-~~~~~~~ 148 (276)
+-.+||||-.. |-. .-.-++.+|-++.-. -.++|++|-||||.-.- ..| ...+. .+. ..+.|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~n-gny--~arlanhkls~gDTY-- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFN-GNY--MARLANHKLSAGDTY-- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceeccC-chH--HHHHhhCCCCccchh--
Confidence 44788888753 211 112244555444331 24589999999998532 111 11110 011 11112
Q ss_pred HhhhhhcCCceEEeC-CeEEEEeCCCCCC
Q 023842 149 FTDCFNCLPVAALVD-EKILCMHGGLSPD 176 (276)
Q Consensus 149 ~~~~~~~lPl~~~i~-~~~l~vHaGi~~~ 176 (276)
+.++.+|.+..-. .+++-.|-||..+
T Consensus 161 --nlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 161 --NLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred --hccccccccccCcchhhhhcccCceec
Confidence 2356677764322 2688888888643
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=41.14 E-value=62 Score=23.50 Aligned_cols=69 Identities=13% Similarity=0.048 Sum_probs=43.4
Q ss_pred cCceeEEeCCCCCHHHHHHHHHhCCC--CCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCC
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGN 121 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGN 121 (276)
...+.||=|---|.+++.++++.+.. +....++++|+.-|.|....+....+-.+...+...+++...|
T Consensus 11 ~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~ 81 (91)
T PF02875_consen 11 PNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDN 81 (91)
T ss_dssp ETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSB
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCC
Confidence 34577888877788888888776532 3445677789998888777775556655555455555544444
No 134
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=39.83 E-value=58 Score=32.56 Aligned_cols=55 Identities=22% Similarity=0.201 Sum_probs=41.2
Q ss_pred cCceeEEeCCCC------------CHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHH
Q 023842 53 EAPIKICGDVHG------------QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAY 107 (276)
Q Consensus 53 ~~~i~viGDIHG------------~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~l 107 (276)
..||.|-.|+|= .+.+|..+|+.+.-..-+-++.-||++.-..-|..+|-..+.+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 468999999993 3788899998766555566667799999888787776554444
No 135
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=35.52 E-value=99 Score=29.83 Aligned_cols=66 Identities=11% Similarity=0.038 Sum_probs=46.3
Q ss_pred CceeEEeCCCC-CHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcC-CcEEEcCC
Q 023842 54 APIKICGDVHG-QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYK-ENFFLLRG 120 (276)
Q Consensus 54 ~~i~viGDIHG-~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p-~~v~~lrG 120 (276)
..+.||=|-+. +.++++++|+.+...+..+++.+||+..-|+.+.+.-..+..+-.... +.++ .-|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~-~~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVL-SVG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEE-EEC
Confidence 45788889554 688888888765433445788899999999999888777765544333 4444 446
No 136
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=33.09 E-value=18 Score=35.30 Aligned_cols=23 Identities=17% Similarity=0.436 Sum_probs=19.2
Q ss_pred cCceeEEeCCCCCHHHHHHHHHh
Q 023842 53 EAPIKICGDVHGQFSDLLRLFEY 75 (276)
Q Consensus 53 ~~~i~viGDIHG~~~~l~~il~~ 75 (276)
.+.=-+++|+||.|++|..+|+.
T Consensus 37 KgTEHF~SDvHGEYeaF~hVLrN 59 (648)
T COG3855 37 KGTEHFMSDVHGEYEAFNHVLRN 59 (648)
T ss_pred cchhhhhhhhhchHHHHHHHHHc
Confidence 35667889999999999999875
No 137
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=32.28 E-value=2e+02 Score=23.75 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=58.6
Q ss_pred eEEeCCCCCHHHHHHHHHh-CCC------------CCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842 57 KICGDVHGQFSDLLRLFEY-GGY------------PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 57 ~viGDIHG~~~~l~~il~~-~~~------------~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (276)
++.+=.+||-..+.+.+.. ++- .....+||+|=-+|+|.-.-++.++|-.|+ +.+|++. |-.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T~- 76 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GTA- 76 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Eec-
Confidence 5566677887777655432 222 123579999999999999999999988764 3455432 221
Q ss_pred cchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCC
Q 023842 124 CASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPD 176 (276)
Q Consensus 124 ~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~ 176 (276)
|+.. ...|...+.+....++..= ..+-+ .|+|+|-++|.
T Consensus 77 --------G~~~--~s~~~~~~~~~~~~~~~~~---~~~lg-~f~CqGk~~~~ 115 (160)
T PF12641_consen 77 --------GAGP--DSEYAKKILKNVEALLPKG---NEILG-TFMCQGKMDPK 115 (160)
T ss_pred --------CCCC--chHHHHHHHHHHHHhhccC---Ceecc-eEEeCCcCCHH
Confidence 2211 1122223334444443332 22233 67888988875
No 138
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=30.89 E-value=67 Score=29.74 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=27.9
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYV 91 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~V 91 (276)
..|..++|+=|+-..+.++-+.. +.+.+||+||.+
T Consensus 29 ~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 29 DEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred HHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 45788889999888888887764 567799999983
No 139
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=30.52 E-value=44 Score=26.96 Aligned_cols=83 Identities=27% Similarity=0.393 Sum_probs=44.6
Q ss_pred CCCCCHHHHHHHHHhCCCCCCcc--eeeecCcccCCCCcHHHHHHHHHHhhhcCCcEE--EcCCCcccchhhhhccchhH
Q 023842 61 DVHGQFSDLLRLFEYGGYPPEAN--YLFLGDYVDRGKQSIETICLLLAYKVKYKENFF--LLRGNHECASINRIYGFYDE 136 (276)
Q Consensus 61 DIHG~~~~l~~il~~~~~~~~~~--~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~--~lrGNHE~~~~~~~~~f~~e 136 (276)
|+.|++..|++.|+.++++..-. -+-.||=- .-+.++.+++ +.|+..|. ++.=++|. ...
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~p~----afLpil~~~L---~~yS~~va~~l~~~g~eL---------~~k 64 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGDPS----AFLPILHYAL---LSYSTHVARLLVDRGYEL---------YGK 64 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCCHH----HHHHHHHHHH---HcCCHHHHHHHHHcCchh---------hcC
Confidence 89999999999999999984422 23345431 1233333332 22443321 12222221 122
Q ss_pred HHhhhhhhhhHHHhhhhhcCCce
Q 023842 137 CKRRFNVRVWKTFTDCFNCLPVA 159 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~lPl~ 159 (276)
-..++.+.+|+.+.+.|.+-|..
T Consensus 65 ~D~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 65 NDLRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCC
Confidence 23345556777777777776654
No 140
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=29.43 E-value=34 Score=30.96 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=24.5
Q ss_pred ceeeecCcccCCCCcHHH-HHHHHHHhhhcCCcEEEcCCCcccc
Q 023842 83 NYLFLGDYVDRGKQSIET-ICLLLAYKVKYKENFFLLRGNHECA 125 (276)
Q Consensus 83 ~~vfLGD~VDrG~~s~ev-l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (276)
+++|+||+|.+ ...++ -..|-.+|.+++..+++. |=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 58999999965 22332 356667777777665554 44544
No 141
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.21 E-value=1.3e+02 Score=27.53 Aligned_cols=42 Identities=26% Similarity=0.293 Sum_probs=31.1
Q ss_pred ceeecCceeEEeCCCC-------------CH-HHHHHHHHhCCCCCCcceeeecCc
Q 023842 49 LLELEAPIKICGDVHG-------------QF-SDLLRLFEYGGYPPEANYLFLGDY 90 (276)
Q Consensus 49 ~~~~~~~i~viGDIHG-------------~~-~~l~~il~~~~~~~~~~~vfLGD~ 90 (276)
+....++++|+||=|= .| ++|..+.+.++.+...+++++||.
T Consensus 101 ~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 101 FYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred hcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 4455688999988772 22 455667788888888899999986
No 142
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=29.08 E-value=3.6e+02 Score=22.93 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=57.9
Q ss_pred cccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCC-----------------------
Q 023842 24 QVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP----------------------- 80 (276)
Q Consensus 24 ~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~----------------------- 80 (276)
.+.++++++.+-+.+..+.+.++..= ...++||=++|++--+-.++..+.++.
T Consensus 9 evLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~ 84 (178)
T COG0634 9 EVLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKIL 84 (178)
T ss_pred eEeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEe
Confidence 35689999999999998888877532 678999999999888877777654421
Q ss_pred --------CcceeeecCcccCCCCcHHHHHHHH
Q 023842 81 --------EANYLFLGDYVDRGKQSIETICLLL 105 (276)
Q Consensus 81 --------~~~~vfLGD~VDrG~~s~evl~~l~ 105 (276)
..+++++=|++|-|.--..+.++|.
T Consensus 85 kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 85 KDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred cccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 1357889999998875555555543
No 143
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=28.59 E-value=44 Score=29.94 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=25.8
Q ss_pred ceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCC
Q 023842 83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRG 120 (276)
Q Consensus 83 ~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrG 120 (276)
+++|+||+|.+.-.. -+...|-.+|.+++..+++.-|
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEEEECC
Confidence 478999999876543 3556777777777766655544
No 144
>COG3560 FMR2 Predicted oxidoreductase related to nitroreductase [General function prediction only]
Probab=27.08 E-value=1.8e+02 Score=24.93 Aligned_cols=45 Identities=18% Similarity=0.416 Sum_probs=32.5
Q ss_pred CCccccCCHHHHHHHHHHHHHHHhhCCCcee-ecCc-eeEEeCCCCCHHH
Q 023842 21 TTKQVQLTEAEIRQLCAASKEIFLSQPNLLE-LEAP-IKICGDVHGQFSD 68 (276)
Q Consensus 21 ~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~-~~~~-i~viGDIHG~~~~ 68 (276)
.++..+.+.+++.++++.+ ++.-|+-.. .+.| ++++||-|-.+=+
T Consensus 19 L~k~lp~~~e~i~~~v~~a---vk~tPsaFNSQssR~ViL~gd~h~KlWd 65 (200)
T COG3560 19 LKKNLPVSDEEIKEIVKEA---VKHTPSAFNSQSSRVVILFGDEHDKLWD 65 (200)
T ss_pred cCCCCCCcHHHHHHHHHHH---HhcCCcccccCCceEEEEeccchHHHHH
Confidence 5777788888888888765 456676554 4555 6778999987654
No 145
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.30 E-value=41 Score=31.45 Aligned_cols=57 Identities=25% Similarity=0.426 Sum_probs=34.6
Q ss_pred HhhCCCceeecCceeEEeCCC-CCHHHHHHHHHhCCCCCCcceee-ecCccc---CCCCcHHHHHHHHHHh
Q 023842 43 FLSQPNLLELEAPIKICGDVH-GQFSDLLRLFEYGGYPPEANYLF-LGDYVD---RGKQSIETICLLLAYK 108 (276)
Q Consensus 43 l~~ep~~~~~~~~i~viGDIH-G~~~~l~~il~~~~~~~~~~~vf-LGD~VD---rG~~s~evl~~l~~lk 108 (276)
++.-|..+.-...++|+||.| |||.++... +..++| +-|+ | -|+....++.+..+|.
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DF-De~~~g~~~~DlvRl~~Sl~ 107 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADF-DEGHLGQYIWDLVRLAVSLV 107 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhccC--------CCceEEEeccc-chhhccchHHHHHHHHHHHH
Confidence 345565666667899999999 888876432 222333 4554 2 2445566666666654
No 146
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=24.41 E-value=3e+02 Score=26.09 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=0.0
Q ss_pred HHHHHHHHhhCCCceeecCceeEEeCCC--CCHHH-----HHHHHHhCCCCCCcceeeecCc-----------ccCCCCc
Q 023842 36 CAASKEIFLSQPNLLELEAPIKICGDVH--GQFSD-----LLRLFEYGGYPPEANYLFLGDY-----------VDRGKQS 97 (276)
Q Consensus 36 ~~~~~~~l~~ep~~~~~~~~i~viGDIH--G~~~~-----l~~il~~~~~~~~~~~vfLGD~-----------VDrG~~s 97 (276)
++++.+.+++.+ ..+++|+|+.- |+++. +.+++..... +.+++.||- +-.-.+.
T Consensus 312 ~~~al~~l~~~~-----~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~---d~vi~~g~~~~~~~~~~~~~~~~~~~~ 383 (417)
T TIGR01143 312 MRAALDALARFP-----GKKILVLGDMAELGEYSEELHAEVGRYANSLGI---DLVFLVGEEAAVIYDSLGCKGFHFADK 383 (417)
T ss_pred HHHHHHHHHhCC-----CCEEEEEcCchhcChHHHHHHHHHHHHHHHcCC---CEEEEECHHHHHHHHhcccCcEEECCH
Q ss_pred HHHHHHHHHHhhhcCCcEEEcCCCc
Q 023842 98 IETICLLLAYKVKYKENFFLLRGNH 122 (276)
Q Consensus 98 ~evl~~l~~lk~~~p~~v~~lrGNH 122 (276)
-++++.+. +...++.++++.|.+
T Consensus 384 ~~~~~~l~--~~~~~~d~VLlkGSr 406 (417)
T TIGR01143 384 DELLAFLK--LELGEGDVVLVKGSR 406 (417)
T ss_pred HHHHHHHH--HhcCCCCEEEEEeCC
No 147
>PLN00084 photosystem II subunit S (PsbS); Provisional
Probab=23.18 E-value=52 Score=27.79 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=24.5
Q ss_pred ecCcccCCCCcHHHHHHHHHHh-------hhcCCcEEEcCCCccc
Q 023842 87 LGDYVDRGKQSIETICLLLAYK-------VKYKENFFLLRGNHEC 124 (276)
Q Consensus 87 LGD~VDrG~~s~evl~~l~~lk-------~~~p~~v~~lrGNHE~ 124 (276)
+||.|.||..++|-|.-=.... +-+|+++.++. ||=.
T Consensus 9 vgdvvtrg~gp~eql~de~~~igahassvlfhpprftlv~-nhvn 52 (214)
T PLN00084 9 VGDVVTRGAGPLEQLRDEEMFIGAHASSVLFHPPRFTLVM-NHIN 52 (214)
T ss_pred hhhhhccCCCcHHHhhhhHHHhhhcccccccCCccchhhh-ccCC
Confidence 7999999999999775433222 12566666554 7743
No 148
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.85 E-value=2.4e+02 Score=22.57 Aligned_cols=60 Identities=17% Similarity=0.128 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCCCCcceeeecCcccCCCCc-----HHHHHHHHHHhhhcCCcEEEc---CCCcccc
Q 023842 66 FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLL---RGNHECA 125 (276)
Q Consensus 66 ~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s-----~evl~~l~~lk~~~p~~v~~l---rGNHE~~ 125 (276)
++.|++.++..+....-.++|+|+-.|++.+| +...-.+..--...|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 67888888887665555677899999988665 222222222222477776555 4777665
No 149
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=22.42 E-value=1.5e+02 Score=22.69 Aligned_cols=64 Identities=23% Similarity=0.188 Sum_probs=41.9
Q ss_pred ceeEEeCCCCCHHHHHHHHHhCCCCCC-----------------cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEE
Q 023842 55 PIKICGDVHGQFSDLLRLFEYGGYPPE-----------------ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFL 117 (276)
Q Consensus 55 ~i~viGDIHG~~~~l~~il~~~~~~~~-----------------~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~ 117 (276)
||+||.|=-.....|..+|+.+|.... ..+|.+|+.- .....+..+...+|.--++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 467777777777778888877665321 1245566652 4445555555567777788
Q ss_pred cCCCcccc
Q 023842 118 LRGNHECA 125 (276)
Q Consensus 118 lrGNHE~~ 125 (276)
+.|.++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 88998887
No 150
>PF04800 ETC_C1_NDUFA4: ETC complex I subunit conserved region; InterPro: IPR006885 This entry represents prokaryotic NADH-ubiquinone oxidoreductase subunits (1.6.5.3 from EC, 1.6.99.3 from EC) from complex I of the electron transport chain initially identified in Neurospora crassa as a 21 kDa protein [].; GO: 0016651 oxidoreductase activity, acting on NADH or NADPH, 0022900 electron transport chain, 0005743 mitochondrial inner membrane; PDB: 2JYA_A 2LJU_A.
Probab=21.55 E-value=2e+02 Score=22.04 Aligned_cols=45 Identities=11% Similarity=0.253 Sum_probs=19.8
Q ss_pred cEEec-CHHHHHHHHHHcCCCeEEEecccCCCCcccceeccCCCCCCCCC
Q 023842 220 VSYTF-GADKVVEFLQKHDLDLICRAHQILKASEKKGKVGFGNNMLRPGT 268 (276)
Q Consensus 220 ~~~~f-G~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~~~~~~~~~~~~~ 268 (276)
..+.| ..+....|++++|+.+.|..=..-.- +. -.||.|+...+.
T Consensus 51 v~l~F~skE~Ai~yaer~G~~Y~V~~p~~r~~---~~-ksY~dNF~~~r~ 96 (101)
T PF04800_consen 51 VRLKFDSKEDAIAYAERNGWDYEVEEPKKRKR---RP-KSYADNFSWNRR 96 (101)
T ss_dssp CEEEESSHHHHHHHHHHCT-EEEEE-STT---------------------
T ss_pred eEeeeCCHHHHHHHHHHcCCeEEEeCCCCCcC---Cc-ccHHHhCCcCCC
Confidence 34455 57788999999999999885443222 22 258888876543
No 151
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=21.49 E-value=3.1e+02 Score=22.53 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=43.2
Q ss_pred CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842 54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHE 123 (276)
Q Consensus 54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE 123 (276)
-++.|++. |....+...++..++...-..++..|-+....-..+++..++..--..|+++.++ |.+.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v-gD~~ 175 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV-ASNP 175 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE-eCCH
Confidence 46888887 5667777888888875444456666667766666677766655433356665544 5543
No 152
>PF09893 DUF2120: Uncharacterized protein conserved in archaea (DUF2120); InterPro: IPR014515 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.35 E-value=1.6e+02 Score=24.20 Aligned_cols=54 Identities=26% Similarity=0.255 Sum_probs=32.1
Q ss_pred cCCHHHHHHHHHHHHHHHhh-CCC------ceeecCceeEEeCCCCCHHHHHHHHHhCCCCC
Q 023842 26 QLTEAEIRQLCAASKEIFLS-QPN------LLELEAPIKICGDVHGQFSDLLRLFEYGGYPP 80 (276)
Q Consensus 26 ~l~~~~~~~l~~~~~~~l~~-ep~------~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~ 80 (276)
.|..+++..+-+++.++... +.. +.++-...-++.|-+| +..+++-|+..|+.-
T Consensus 53 ~L~~~~ie~lse~g~el~~~~de~~~~ir~i~e~~~es~~~~D~~G-ferlKesfE~mGc~~ 113 (146)
T PF09893_consen 53 YLGAEEIEKLSEEGFELIEEMDEILEFIRSINEIFGESDIYPDEFG-FERLKESFEAMGCEC 113 (146)
T ss_pred HhchhhhhhhhhhhHHHHHhHHHHHHHHHHHHHhccCCccchhhhH-HHHHHHHHHhcCceE
Confidence 34445555555555555555 222 2223334456667788 899999999988743
No 153
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=21.21 E-value=3.2e+02 Score=20.20 Aligned_cols=85 Identities=16% Similarity=0.081 Sum_probs=44.1
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCceeecCc-----eeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHH
Q 023842 26 QLTEAEIRQLCAASKEIFLSQPNLLELEAP-----IKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIET 100 (276)
Q Consensus 26 ~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~-----i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~ev 100 (276)
.++.+++.+++++. ....++.+..+ -.+-|=+|=-+..|...+..+..+++..+|+. ...|..|...
T Consensus 11 ~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~rs~~a 82 (109)
T cd01533 11 SVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRTRSIIG 82 (109)
T ss_pred cCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCchHHHH
Confidence 56777776665431 11245555321 22344455566777666666654444555554 3456777666
Q ss_pred HHHHHHHhhhcCCcEEEcCC
Q 023842 101 ICLLLAYKVKYKENFFLLRG 120 (276)
Q Consensus 101 l~~l~~lk~~~p~~v~~lrG 120 (276)
...|..+- +++.++.|.|
T Consensus 83 ~~~L~~~G--~~~~v~~l~g 100 (109)
T cd01533 83 AQSLINAG--LPNPVAALRN 100 (109)
T ss_pred HHHHHHCC--CCcceeEecC
Confidence 55554332 2222665655
No 154
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=21.16 E-value=6.2 Score=37.70 Aligned_cols=91 Identities=11% Similarity=-0.118 Sum_probs=63.7
Q ss_pred cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhh----hhhhhHHHhhhhhcCC
Q 023842 82 ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRF----NVRVWKTFTDCFNCLP 157 (276)
Q Consensus 82 ~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~----~~~~~~~~~~~~~~lP 157 (276)
-..|+++++.+++.++++.+.+....+..+..+.-..++||+.... +++++.-.. ...+++..++-++..+
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~~~-----~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDSSF-----KRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCcch-----hhhheeecccccCceEEEEeccCcCccce
Confidence 4578999999999999999888888887788888999999955432 222211111 1124455566666677
Q ss_pred ceEEeCCeEEEEeCCCCCCCC
Q 023842 158 VAALVDEKILCMHGGLSPDLK 178 (276)
Q Consensus 158 l~~~i~~~~l~vHaGi~~~~~ 178 (276)
...+.. ++++.|++..|...
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~ 143 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTS 143 (476)
T ss_pred eeeech-hhHhhcCCcCCccc
Confidence 776544 79999999988653
No 155
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=20.31 E-value=1.1e+02 Score=27.66 Aligned_cols=66 Identities=18% Similarity=0.117 Sum_probs=35.3
Q ss_pred CceeEEeCCCCCH--HHHHHHHHhCCCC-CCcceeeecCcccCCCC-cHHHHHHHHHHhhhcCCcEEEcCCCccc
Q 023842 54 APIKICGDVHGQF--SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQ-SIETICLLLAYKVKYKENFFLLRGNHEC 124 (276)
Q Consensus 54 ~~i~viGDIHG~~--~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~-s~evl~~l~~lk~~~p~~v~~lrGNHE~ 124 (276)
||+.++|||-|.. ..+...|..+... ..+-+|..|.-...|.. ..++...+++. .-+ ++=.|||=.
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~----G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA----GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh----CCC-EEecccccc
Confidence 6788888888863 3344444332221 12445556776655542 45555555443 223 445688854
Done!