Query         023842
Match_columns 276
No_of_seqs    225 out of 1910
Neff          7.4 
Searched_HMMs 29240
Date          Mon Mar 25 13:41:55 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023842hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3e7a_A PP-1A, serine/threonine 100.0 6.1E-63 2.1E-67  448.3  25.0  254    1-254     3-256 (299)
  2 3ll8_A Serine/threonine-protei 100.0 8.8E-59   3E-63  428.7  25.4  242    5-254    29-277 (357)
  3 3h63_A Serine/threonine-protei 100.0 1.2E-58 4.2E-63  422.8  25.1  245    1-254    11-261 (315)
  4 1fjm_A Protein serine/threonin 100.0 1.4E-58 4.7E-63  425.7  25.5  249    5-253     8-256 (330)
  5 3icf_A PPT, serine/threonine-p 100.0 1.8E-58 6.1E-63  424.7  23.8  245    1-254    12-265 (335)
  6 2ie4_C PP2A-alpha;, serine/thr 100.0 1.7E-56 5.7E-61  409.0  24.5  243    3-254     7-250 (309)
  7 1aui_A Calcineurin, serine/thr 100.0 3.4E-56 1.1E-60  426.2  25.9  242    5-254    42-290 (521)
  8 1wao_1 Serine/threonine protei 100.0 6.4E-51 2.2E-55  391.7  24.6  244    2-254   165-414 (477)
  9 2z72_A Protein-tyrosine-phosph 100.0 1.1E-36 3.7E-41  282.0   9.7  202   43-251    60-292 (342)
 10 2dfj_A Diadenosinetetraphospha 100.0 1.1E-33 3.8E-38  255.1   2.6  190   54-251     1-206 (280)
 11 2qjc_A Diadenosine tetraphosph  99.9 3.1E-27 1.1E-31  210.8   2.8  184   41-232     6-210 (262)
 12 1g5b_A Serine/threonine protei  99.9 1.1E-22 3.9E-27  176.1  10.9  118   53-176    12-145 (221)
 13 3rqz_A Metallophosphoesterase;  99.7 8.7E-18   3E-22  147.7  11.4  151   53-253     3-158 (246)
 14 1nnw_A Hypothetical protein; s  99.7 2.7E-17 9.2E-22  144.2  12.4  159   54-253     2-183 (252)
 15 3qfm_A SAPH, putative uncharac  99.7 2.7E-17 9.4E-22  147.0   9.4  115   54-173    12-139 (270)
 16 1uf3_A Hypothetical protein TT  99.2 3.5E-11 1.2E-15  102.4   9.4   74   53-127     5-78  (228)
 17 1su1_A Hypothetical protein YF  99.2 1.5E-11 5.1E-16  105.5   6.9   69   54-126    26-102 (208)
 18 1s3l_A Hypothetical protein MJ  99.2 4.7E-11 1.6E-15  101.0   7.6   65   54-127    26-90  (190)
 19 2a22_A Vacuolar protein sortin  99.1 7.3E-10 2.5E-14   95.2  11.3  123   52-251    24-155 (215)
 20 1xm7_A Hypothetical protein AQ  99.1 5.6E-10 1.9E-14   94.2  10.4  135   53-252     1-154 (195)
 21 3ck2_A Conserved uncharacteriz  99.0 2.5E-10 8.7E-15   94.8   6.0  112   54-253     7-121 (176)
 22 2kkn_A Uncharacterized protein  99.0 1.5E-10 5.1E-15   97.0   3.3   62   54-125    23-86  (178)
 23 1z2w_A Vacuolar protein sortin  99.0 1.6E-09 5.6E-14   91.2   8.8   64   54-126    11-77  (192)
 24 3ib7_A ICC protein; metallopho  98.8 5.9E-09   2E-13   93.7   7.8   73   53-125    25-113 (330)
 25 2yvt_A Hypothetical protein AQ  98.8 2.3E-09 7.8E-14   93.4   2.7   74   53-127     5-104 (260)
 26 3d03_A Phosphohydrolase; glyce  98.3 6.5E-07 2.2E-11   78.0   6.6   70   54-125     1-84  (274)
 27 3rl5_A Metallophosphoesterase   98.3 4.9E-07 1.7E-11   81.5   4.7   64   54-127    60-125 (296)
 28 2q8u_A Exonuclease, putative;   98.2 8.5E-07 2.9E-11   80.6   5.2   78   47-126    11-110 (336)
 29 3av0_A DNA double-strand break  98.2 1.5E-06 5.2E-11   80.7   6.9   73   53-126    20-109 (386)
 30 1ii7_A MRE11 nuclease; RAD50,   98.2 1.9E-06 6.5E-11   78.4   5.8   71   54-125     1-88  (333)
 31 2nxf_A Putative dimetal phosph  98.1 7.5E-07 2.6E-11   78.9   2.8   74   53-126     5-101 (322)
 32 2xmo_A LMO2642 protein; phosph  97.9 8.4E-06 2.9E-10   76.5   4.7   73   53-126    39-139 (443)
 33 3tho_B Exonuclease, putative;   97.8 6.9E-06 2.4E-10   76.2   2.9   70   54-125     1-91  (379)
 34 3t1i_A Double-strand break rep  97.7 3.6E-05 1.2E-09   72.8   5.0   55   53-107    32-98  (431)
 35 4fbw_A DNA repair protein RAD3  97.6 5.3E-05 1.8E-09   71.3   6.1   54   53-106    13-78  (417)
 36 4fbk_A DNA repair and telomere  97.6 5.9E-05   2E-09   71.9   6.3   54   53-106    76-141 (472)
 37 1ute_A Protein (II purple acid  97.1 0.00014 4.7E-09   63.9   2.0   73   53-125     6-95  (313)
 38 2qfp_A Purple acid phosphatase  96.9   0.001 3.4E-08   62.1   5.5   71   53-126   119-198 (424)
 39 1xzw_A Purple acid phosphatase  96.6   0.002 6.8E-08   60.2   5.1   70   53-126   126-205 (426)
 40 3tgh_A Glideosome-associated p  95.4  0.0027 9.4E-08   58.0   0.3   73   54-126     4-87  (342)
 41 1hp1_A 5'-nucleotidase; metall  95.2    0.01 3.5E-07   56.9   3.5   68   53-125     8-95  (516)
 42 3qfk_A Uncharacterized protein  94.9   0.018 6.1E-07   55.4   4.1   67   53-124    19-112 (527)
 43 1t71_A Phosphatase, conserved   94.4   0.016 5.6E-07   51.4   2.4   70   52-126     3-76  (281)
 44 2z1a_A 5'-nucleotidase; metal-  94.1   0.033 1.1E-06   53.9   4.0   69   52-125    28-119 (552)
 45 4h2g_A 5'-nucleotidase; dimer,  93.7   0.034 1.1E-06   53.8   3.2   67   53-124    25-117 (546)
 46 3ive_A Nucleotidase; structura  93.3   0.026   9E-07   54.0   1.6   67   53-124     6-96  (509)
 47 3ztv_A NAD nucleotidase, NADN;  92.9   0.074 2.5E-06   51.8   4.2   68   52-124    11-105 (579)
 48 2z06_A Putative uncharacterize  92.5     0.1 3.5E-06   45.6   4.2   67   54-126     1-70  (252)
 49 1t70_A Phosphatase; crystal, X  91.5    0.17 5.8E-06   44.2   4.5   66   54-125     1-69  (255)
 50 3gve_A YFKN protein; alpha-bet  90.5   0.098 3.4E-06   47.5   2.0   43   53-95     11-70  (341)
 51 3c9f_A 5'-nucleotidase; 2',3'-  89.7    0.12   4E-06   50.2   1.9   69   53-126    15-108 (557)
 52 3jyf_A 2',3'-cyclic nucleotide  89.2    0.12 4.2E-06   46.9   1.5   43   53-95      8-67  (339)
 53 4h1s_A 5'-nucleotidase; hydrol  83.6     0.8 2.7E-05   43.7   4.0   66   55-125     5-96  (530)
 54 2wdc_A SOXB, sulfur oxidation   80.1    0.93 3.2E-05   43.8   3.0   37   82-124   125-166 (562)
 55 2yeq_A Apased, PHOD, alkaline   73.4     4.8 0.00017   38.4   5.9   34   54-91    117-153 (527)
 56 3e0j_A DNA polymerase subunit   64.2      17 0.00058   34.3   7.4   74   53-127   200-311 (476)
 57 3flo_A DNA polymerase alpha su  44.6      27 0.00093   32.8   5.2   61   65-125   164-247 (460)
 58 1jil_A Tyrrs, tyrosyl-tRNA syn  35.1      26 0.00088   32.5   3.5   72    1-91      1-75  (420)
 59 1ymm_C MBP peptide, HLA class   32.5      18  0.0006   19.8   1.1   19  257-275     5-23  (26)
 60 2lju_A Putative oxidoreductase  23.5 2.3E+02  0.0078   21.0   6.9   50  211-264    50-103 (108)
 61 2lug_A Myelin basic protein; i  21.6      18 0.00062   21.0  -0.1   18  259-276    15-32  (36)
 62 1h3o_A Transcription initiatio  20.2      42  0.0014   23.4   1.5   39   28-66     36-74  (75)

No 1  
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00  E-value=6.1e-63  Score=448.30  Aligned_cols=254  Identities=76%  Similarity=1.366  Sum_probs=243.3

Q ss_pred             CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCC
Q 023842            1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP   80 (276)
Q Consensus         1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~   80 (276)
                      |+...++++|+++++.+...+++.+.++++++.+||++|+++|.+||+++++++|++|||||||++++|.++|+..++++
T Consensus         3 ~~~~~~d~~i~~l~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~   82 (299)
T 3e7a_A            3 MGSLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPP   82 (299)
T ss_dssp             ---CCHHHHHHHHHTTTTSCTTCCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTT
T ss_pred             CCccCHHHHHHHHHhccccCCCcccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCC
Confidence            45556999999999988778888889999999999999999999999999999999999999999999999999999999


Q ss_pred             CcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceE
Q 023842           81 EANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAA  160 (276)
Q Consensus        81 ~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~  160 (276)
                      .+++||||||||||++|.||+.+|+++|..+|.++++||||||.+.++..|||.+|+.++|+..+|+.+.++|++||+++
T Consensus        83 ~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~~~l~~~~~~~f~~LPlaa  162 (299)
T 3e7a_A           83 ESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAA  162 (299)
T ss_dssp             SSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTTCCCEE
T ss_pred             CccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhhHHHHHHHHHHHhhCCceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCe
Q 023842          161 LVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDL  240 (276)
Q Consensus       161 ~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~  240 (276)
                      +++++++|||||++|...++++|+.+.||.+.++.++++|+|||||.....+|.+++||.++.||++++++||++|++++
T Consensus       163 ii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~fl~~n~l~~  242 (299)
T 3e7a_A          163 IVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDL  242 (299)
T ss_dssp             EETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHHHHHTCSE
T ss_pred             EECCeEEEEcCccCcccCCHHHHHhccCCCcCCcchhhhhhhcCCccccccCcccCCCCcceeeCHHHHHHHHHHCCCeE
Confidence            99999999999999999999999999999999999999999999999877899999999999999999999999999999


Q ss_pred             EEEecccCCCCccc
Q 023842          241 ICRAHQILKASEKK  254 (276)
Q Consensus       241 iirgHe~~~~~~~~  254 (276)
                      ||||||++.+|++-
T Consensus       243 IiR~Hq~v~~Gy~~  256 (299)
T 3e7a_A          243 ICRAHQVVEDGYEF  256 (299)
T ss_dssp             EEECCSCCTTSEEE
T ss_pred             EEEcCeeeecceEE
Confidence            99999999999973


No 2  
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00  E-value=8.8e-59  Score=428.67  Aligned_cols=242  Identities=43%  Similarity=0.831  Sum_probs=229.5

Q ss_pred             HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcce
Q 023842            5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY   84 (276)
Q Consensus         5 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~   84 (276)
                      .++.+++.++..+        .++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.++|
T Consensus        29 ~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~  100 (357)
T 3ll8_A           29 RVDILKAHLMKEG--------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRY  100 (357)
T ss_dssp             CHHHHHHHHHTTC--------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCE
T ss_pred             CHHHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCcEE
Confidence            4677888888877        89999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCC
Q 023842           85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE  164 (276)
Q Consensus        85 vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~  164 (276)
                      ||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..+||.+||..+|+..+|+.+.+||++||+++++++
T Consensus       101 vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~~~l~~~~~~~f~~LPlaaii~~  180 (357)
T 3ll8_A          101 LFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQ  180 (357)
T ss_dssp             EECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCHHHHHHHHHHHHTSCSEEEETT
T ss_pred             EECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccchhHHHHHHHHHHhCCcceEEcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCC------CCcc-cCCCCcEEecCHHHHHHHHHHcC
Q 023842          165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI------EGWG-ENDRGVSYTFGADKVVEFLQKHD  237 (276)
Q Consensus       165 ~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~------~~~~-~~~rg~~~~fG~~~~~~fl~~~~  237 (276)
                      +++|||||++|...++++|+.+.|+.+.++.+.++|+|||||....      .+|. +++||.++.||.+++++||++|+
T Consensus       181 ~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~  260 (357)
T 3ll8_A          181 QFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNN  260 (357)
T ss_dssp             TEEECSSCCCTTCCSHHHHHTCCCSSCCCSSSHHHHHHHCEECTTTTSCSCCCSEEECTTTTSSEEECHHHHHHHHHHTT
T ss_pred             cEEEEecCcCcccCCHHHHhhccccccCCccCchhHhhccCccccccccccccccccCCCCCCceEEChHHHHHHHHHCC
Confidence            9999999999999999999999999999999999999999998642      3455 46799999999999999999999


Q ss_pred             CCeEEEecccCCCCccc
Q 023842          238 LDLICRAHQILKASEKK  254 (276)
Q Consensus       238 l~~iirgHe~~~~~~~~  254 (276)
                      +++||||||++++||+-
T Consensus       261 l~~IiRaHq~~~~Gy~~  277 (357)
T 3ll8_A          261 LLSILRAHEAQDAGYRM  277 (357)
T ss_dssp             CSEEEECCSCCTTSEEE
T ss_pred             CeEEEEeccccccceEE
Confidence            99999999999999974


No 3  
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00  E-value=1.2e-58  Score=422.84  Aligned_cols=245  Identities=40%  Similarity=0.756  Sum_probs=233.3

Q ss_pred             CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecC----ceeEEeCCCCCHHHHHHHHHhC
Q 023842            1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEA----PIKICGDVHGQFSDLLRLFEYG   76 (276)
Q Consensus         1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~----~i~viGDIHG~~~~l~~il~~~   76 (276)
                      +|.+.++++|+.+++.+        .++++++.+||.+|+++|++||++++++.    +++|||||||++.+|.++|+..
T Consensus        11 ~~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~   82 (315)
T 3h63_A           11 VTISFMKELMQWYKDQK--------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELN   82 (315)
T ss_dssp             CCHHHHHHHHHHHHTTC--------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHh
Confidence            57889999999999987        89999999999999999999999999965    4999999999999999999999


Q ss_pred             CCCCCcc-eeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhc
Q 023842           77 GYPPEAN-YLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNC  155 (276)
Q Consensus        77 ~~~~~~~-~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~  155 (276)
                      ++++.+. +||||||||||++|+||+.+|+++|..+|+++++||||||.+.++..+||.+|+.++|+..+|+.+.++|++
T Consensus        83 g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~~~l~~~~~~~f~~  162 (315)
T 3h63_A           83 GLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEW  162 (315)
T ss_dssp             CCCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTT
T ss_pred             CCCCCCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhhhHHHHHHHHHHhc
Confidence            9987764 999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEeCCeEEEEeCCC-CCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHH
Q 023842          156 LPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQ  234 (276)
Q Consensus       156 lPl~~~i~~~~l~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~  234 (276)
                      ||++++++++++|||||+ +|...++++++.+.|+.+.++.++++|++||||.. ..+|.+++||.++.||++++++||+
T Consensus       163 LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g~~~dllWsDP~~-~~g~~~s~RG~g~~fg~~~~~~fl~  241 (315)
T 3h63_A          163 LPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQP-QNGRSISKRGVSCQFGPDVTKAFLE  241 (315)
T ss_dssp             SCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSSHHHHHHHCEECS-SSSEEECTTSSSEEECHHHHHHHHH
T ss_pred             CCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccchhhhheecCCCC-CCCcCcCCCCceEEECHHHHHHHHH
Confidence            999999999999999999 78888999999999999999999999999999985 4789999999999999999999999


Q ss_pred             HcCCCeEEEecccCCCCccc
Q 023842          235 KHDLDLICRAHQILKASEKK  254 (276)
Q Consensus       235 ~~~l~~iirgHe~~~~~~~~  254 (276)
                      +|++++||||||++++|++-
T Consensus       242 ~n~l~~iiR~Hq~~~~Gy~~  261 (315)
T 3h63_A          242 ENNLDYIIRSHEVKAEGYEV  261 (315)
T ss_dssp             HHTCSEEEECCSCCTTSEEE
T ss_pred             HcCCcEEEEeceeecCCeEE
Confidence            99999999999999999875


No 4  
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00  E-value=1.4e-58  Score=425.67  Aligned_cols=249  Identities=77%  Similarity=1.393  Sum_probs=239.1

Q ss_pred             HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcce
Q 023842            5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY   84 (276)
Q Consensus         5 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~   84 (276)
                      .++++|+++++.+...++....|+++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..++++.+++
T Consensus         8 ~~d~~i~~l~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~   87 (330)
T 1fjm_A            8 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY   87 (330)
T ss_dssp             CHHHHHHHHHHTTTTCTTCCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSSCE
T ss_pred             cHHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcceE
Confidence            68999999999876677777889999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCC
Q 023842           85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE  164 (276)
Q Consensus        85 vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~  164 (276)
                      ||||||||||++|+||+++|+++|+.+|.++++||||||.+.++..+||.+++.++|+..+|+.+.+||++||+++++++
T Consensus        88 vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPl~~~i~~  167 (330)
T 1fjm_A           88 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDE  167 (330)
T ss_dssp             EECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHHHTTCCCEEEETT
T ss_pred             EeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccHHHHHHHHHHHHhCCceEEEcC
Confidence            99999999999999999999999999999999999999999999999999999999988999999999999999988999


Q ss_pred             eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEe
Q 023842          165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRA  244 (276)
Q Consensus       165 ~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirg  244 (276)
                      +++|||||++|.+.+++++..+.|+.+.++.+.+.+++|+||.....+|.++.||.+++||++++.+||+++++++||||
T Consensus       168 ~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g~~~dlLWsdp~~~~~~w~~~~rG~~~~fG~~~~~~fl~~~~l~liir~  247 (330)
T 1fjm_A          168 KIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRA  247 (330)
T ss_dssp             TEEEESSCCCTTCSCHHHHHHCCSSCCCCSSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEEC
T ss_pred             cEEEEccCCCcccCCHHHHhhhhcCccCcccchHHHHHhcCCccccCCcCcccCCCceeeChHHHHHHHHhCCCceEecc
Confidence            99999999999999999999999999998889999999999987778999999999999999999999999999999999


Q ss_pred             cccCCCCcc
Q 023842          245 HQILKASEK  253 (276)
Q Consensus       245 He~~~~~~~  253 (276)
                      ||++.+|++
T Consensus       248 Hq~v~~Gy~  256 (330)
T 1fjm_A          248 HQVVEDGYE  256 (330)
T ss_dssp             CSCCTTSEE
T ss_pred             cccccCCeE
Confidence            999999986


No 5  
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00  E-value=1.8e-58  Score=424.67  Aligned_cols=245  Identities=38%  Similarity=0.709  Sum_probs=230.9

Q ss_pred             CChhHHHHHH-HHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCc------eeEEeCCCCCHHHHHHHH
Q 023842            1 MDETVLDDII-RRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAP------IKICGDVHGQFSDLLRLF   73 (276)
Q Consensus         1 ~~~~~~~~~i-~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~------i~viGDIHG~~~~l~~il   73 (276)
                      +|.+.++++| +.+++.+        .++++++.+||++|+++|++||++++++.+      ++|||||||++++|.++|
T Consensus        12 ~~~~~~~~~i~~~~~~~~--------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~ll   83 (335)
T 3icf_A           12 MSQEFISKMVNDLFLKGK--------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLF   83 (335)
T ss_dssp             CCHHHHHHHHHHTGGGTC--------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHHH
Confidence            3678899999 8888776        899999999999999999999999999887      999999999999999999


Q ss_pred             HhCCCCCCc-ceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhh
Q 023842           74 EYGGYPPEA-NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDC  152 (276)
Q Consensus        74 ~~~~~~~~~-~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~  152 (276)
                      +..++++.+ ++||||||||||++|+||+.+|+++|+.+|+++++||||||.+.++..|||.+|+.++|+..+|+.+.+|
T Consensus        84 ~~~g~~~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~~~l~~~~~~~  163 (335)
T 3icf_A           84 RKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQRIFNMFAQS  163 (335)
T ss_dssp             HHHCCCBTTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCHHHHHHHHHH
T ss_pred             HHcCCCCCCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhccHHHHHHHHHH
Confidence            999998764 5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCceEEeCCeEEEEeCCC-CCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHH
Q 023842          153 FNCLPVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVE  231 (276)
Q Consensus       153 ~~~lPl~~~i~~~~l~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~  231 (276)
                      |++||++++++++++|||||+ +|...++++++.+.|+.+.++.++++|+|||||... .+|.+++||.++.||++++++
T Consensus       164 f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g~~~dlLWSDP~~~-~g~~~s~RG~g~~FG~~~~~~  242 (335)
T 3icf_A          164 FESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWADPQEA-NGMGPSQRGLGHAFGPDITDR  242 (335)
T ss_dssp             HTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSS-SSEEECCCC--EEECHHHHHH
T ss_pred             HhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCccccccccccchhhhhccCCCCc-CCcccCCCCCceeeCHHHHHH
Confidence            999999999999999999999 788899999999999999999999999999999854 789999999999999999999


Q ss_pred             HHHHcCCCeEEEecccCCCCccc
Q 023842          232 FLQKHDLDLICRAHQILKASEKK  254 (276)
Q Consensus       232 fl~~~~l~~iirgHe~~~~~~~~  254 (276)
                      ||++|++++||||||++.+|++-
T Consensus       243 fl~~n~l~~IiR~Hq~~~~Gy~~  265 (335)
T 3icf_A          243 FLRNNKLRKIFRSHELRMGGVQF  265 (335)
T ss_dssp             HHHHTTCSEEEECSSCCTEEEEE
T ss_pred             HHHHCCCeEEEEcCceecCeEEE
Confidence            99999999999999999999874


No 6  
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00  E-value=1.7e-56  Score=409.01  Aligned_cols=243  Identities=50%  Similarity=0.978  Sum_probs=230.8

Q ss_pred             hhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCc
Q 023842            3 ETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEA   82 (276)
Q Consensus         3 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~   82 (276)
                      ...++++|+++++.+        .++++++.+||++|+++|++||+++++++|++|||||||++++|.++|+..+.++.+
T Consensus         7 ~~~~~~~i~~~~~~~--------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~   78 (309)
T 2ie4_C            7 TKELDQWIEQLNECK--------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT   78 (309)
T ss_dssp             HHHHHHHHHHHTTTC--------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred             HHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence            366889999998876        899999999999999999999999999999999999999999999999999998889


Q ss_pred             ceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhh-hhhhHHHhhhhhcCCceEE
Q 023842           83 NYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFN-VRVWKTFTDCFNCLPVAAL  161 (276)
Q Consensus        83 ~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~-~~~~~~~~~~~~~lPl~~~  161 (276)
                      .+||||||||||++|.||+.+|++++..+|.++++||||||.+.++..+||.+++.++|+ ..+|+.+.++|++||++++
T Consensus        79 ~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~~l~~~~~~~~~~LPl~~~  158 (309)
T 2ie4_C           79 NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTAL  158 (309)
T ss_dssp             CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSSTHHHHHHHHHTTSSCSCEE
T ss_pred             EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccHHHHHHHHHHHHhCCceEE
Confidence            999999999999999999999999999999999999999999999999999999999995 5799999999999999998


Q ss_pred             eCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeE
Q 023842          162 VDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLI  241 (276)
Q Consensus       162 i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~i  241 (276)
                      ++++++|||||++|.+.++++++.+.|+.+.++.+.+.+++|+||.. ..+|.+++||.++.||++++++||++||+++|
T Consensus       159 i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~s~RG~g~~fG~~~~~~fl~~n~l~~i  237 (309)
T 2ie4_C          159 VDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDD-RGGWGISPRGAGYTFGQDISETFNHANGLTLV  237 (309)
T ss_dssp             ETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSSHHHHHHHCEECS-SSSEEECTTSSSEEECHHHHHHHHHHTTCSEE
T ss_pred             EcCcEEEECCCCCCcccCHHHHHhhcccccCChhHHHHHHhhCCCcc-ccccccCCCCcccccCHHHHHHHHHHcCCeEE
Confidence            88899999999999999999999999999999989999999999985 47899999999999999999999999999999


Q ss_pred             EEecccCCCCccc
Q 023842          242 CRAHQILKASEKK  254 (276)
Q Consensus       242 irgHe~~~~~~~~  254 (276)
                      |||||++.+|++.
T Consensus       238 ir~Hq~~~~G~~~  250 (309)
T 2ie4_C          238 SRAHQLVMEGYNW  250 (309)
T ss_dssp             EECCSCCTEEEEE
T ss_pred             EecCcceeCCEEE
Confidence            9999999999863


No 7  
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00  E-value=3.4e-56  Score=426.21  Aligned_cols=242  Identities=43%  Similarity=0.834  Sum_probs=228.8

Q ss_pred             HHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCCcce
Q 023842            5 VLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPEANY   84 (276)
Q Consensus         5 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~   84 (276)
                      .++.+++.++..+        .++++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..+.++.++|
T Consensus        42 ~~d~l~~~~~~~~--------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~y  113 (521)
T 1aui_A           42 RVDILKAHLMKEG--------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRY  113 (521)
T ss_dssp             CHHHHHHHHHTTC--------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTCCE
T ss_pred             CHHHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcceE
Confidence            4677888888876        79999999999999999999999999999999999999999999999998888888999


Q ss_pred             eeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEeCC
Q 023842           85 LFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALVDE  164 (276)
Q Consensus        85 vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~  164 (276)
                      ||||||||||++|+||+.+|+++++.+|+++++||||||.+.++..++|.++|..+|+..+|+.+.+||++||+++++++
T Consensus       114 VFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~~~l~~~~~~~f~~LPlaaii~~  193 (521)
T 1aui_A          114 LFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDCLPLAALMNQ  193 (521)
T ss_dssp             EECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCHHHHHHHHHHHTTSCCEEEETT
T ss_pred             EEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhhhHHHHHHHHHHHhCCceEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998999


Q ss_pred             eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCC------CCcccC-CCCcEEecCHHHHHHHHHHcC
Q 023842          165 KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI------EGWGEN-DRGVSYTFGADKVVEFLQKHD  237 (276)
Q Consensus       165 ~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~------~~~~~~-~rg~~~~fG~~~~~~fl~~~~  237 (276)
                      +++|||||++|.+.++++|+.+.|+.+.+..+.++|+|||||....      ..|..| .||.++.||.+++++||++||
T Consensus       194 ~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g~~FG~d~v~~FL~~n~  273 (521)
T 1aui_A          194 QFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNN  273 (521)
T ss_dssp             TEEEESSCCCTTCCSHHHHHHSCCSSSCCSSSHHHHHHHCEECTTTTSCSSCCCEEECTTTTSSEEECHHHHHHHHHHTT
T ss_pred             CceEECCCcCcccCCHHHhhhccCCcCCCccchhhhheecCccccccccccCcceecccCCCcccccCHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999998642      457665 699999999999999999999


Q ss_pred             CCeEEEecccCCCCccc
Q 023842          238 LDLICRAHQILKASEKK  254 (276)
Q Consensus       238 l~~iirgHe~~~~~~~~  254 (276)
                      +++||||||++++||+-
T Consensus       274 l~lIIRaHq~v~~Gy~~  290 (521)
T 1aui_A          274 LLSILRAHEAQDAGYRM  290 (521)
T ss_dssp             CSEEEECCSCCTTSEEE
T ss_pred             CcEEEEccchhccceee
Confidence            99999999999999964


No 8  
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00  E-value=6.4e-51  Score=391.71  Aligned_cols=244  Identities=40%  Similarity=0.754  Sum_probs=228.2

Q ss_pred             ChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeec----CceeEEeCCCCCHHHHHHHHHhCC
Q 023842            2 DETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE----APIKICGDVHGQFSDLLRLFEYGG   77 (276)
Q Consensus         2 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~----~~i~viGDIHG~~~~l~~il~~~~   77 (276)
                      +...++++++.+...+        .++++++..||.++.+++.++|++++++    ++++|||||||++++|.++|+..+
T Consensus       165 tl~~l~~lie~l~~~~--------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~  236 (477)
T 1wao_1          165 TISFMKELMQWYKDQK--------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG  236 (477)
T ss_dssp             CHHHHHHHHHHHHTCC--------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence            4567788888888766        7899999999999999999999999986    459999999999999999999999


Q ss_pred             CCCC-cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcC
Q 023842           78 YPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCL  156 (276)
Q Consensus        78 ~~~~-~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~l  156 (276)
                      +++. +.+||||||||||++|.||+.+|+++|+.+|.++++||||||.+.++..+||..++..+|+..+|+.+.++|++|
T Consensus       237 ~~~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l  316 (477)
T 1wao_1          237 LPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWL  316 (477)
T ss_dssp             CCBTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCTTHHHHHHHHHTTS
T ss_pred             CCCCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhHHHHHHHHHHhccC
Confidence            8875 469999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEeCCeEEEEeCCC-CCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHH
Q 023842          157 PVAALVDEKILCMHGGL-SPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQK  235 (276)
Q Consensus       157 Pl~~~i~~~~l~vHaGi-~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~  235 (276)
                      |++++++++++|||||+ +|...++++++.+.|+.+.++.+..+|++||||... .+|.+++||.++.||++++++||++
T Consensus       317 p~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~~~~dllWsdp~~~-~~~~~~~rg~~~~fg~~~~~~fl~~  395 (477)
T 1wao_1          317 PLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQ-NGRSISKRGVSCQFGPDVTKAFLEE  395 (477)
T ss_dssp             CSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSSHHHHHHHCEECSS-SSCEECTTSSSEEECHHHHHHHHHH
T ss_pred             CcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhhhhhhhccCCCCcc-CCcCcCCCCCceeECHHHHHHHHHH
Confidence            99998998999999999 677789999999999999999999999999999864 6789999999999999999999999


Q ss_pred             cCCCeEEEecccCCCCccc
Q 023842          236 HDLDLICRAHQILKASEKK  254 (276)
Q Consensus       236 ~~l~~iirgHe~~~~~~~~  254 (276)
                      +++++||||||++.+|++-
T Consensus       396 ~~~~~iir~H~~~~~g~~~  414 (477)
T 1wao_1          396 NNLDYIIRSHEVKAEGYEV  414 (477)
T ss_dssp             TTCCEEEECCSCCTEEEEE
T ss_pred             cCCeEEEECCCCCcCCeEE
Confidence            9999999999999999863


No 9  
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00  E-value=1.1e-36  Score=282.01  Aligned_cols=202  Identities=23%  Similarity=0.303  Sum_probs=161.4

Q ss_pred             HhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCC--------CcceeeecCcccCCCCcHHHHHHHHHHhh---hc
Q 023842           43 FLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP--------EANYLFLGDYVDRGKQSIETICLLLAYKV---KY  111 (276)
Q Consensus        43 l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~--------~~~~vfLGD~VDrG~~s~evl~~l~~lk~---~~  111 (276)
                      +.+||+++...++++|||||||++++|.++|+..++.+        .+.+||+|||||||++|.+|+++|++++.   .+
T Consensus        60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~  139 (342)
T 2z72_A           60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA  139 (342)
T ss_dssp             TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence            78999999999999999999999999999999988653        47899999999999999999999999986   68


Q ss_pred             CCcEEEcCCCcccchhhhh-------ccchhHHHhhhhhhhh---HHHhhhhhcCCceEEeCCeEEEEeCCCCCCCC---
Q 023842          112 KENFFLLRGNHECASINRI-------YGFYDECKRRFNVRVW---KTFTDCFNCLPVAALVDEKILCMHGGLSPDLK---  178 (276)
Q Consensus       112 p~~v~~lrGNHE~~~~~~~-------~~f~~e~~~~~~~~~~---~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~---  178 (276)
                      |.++++||||||.+.++..       +++..++.......+|   ....+||+++|+++.++ +++|||||++|.+.   
T Consensus       140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~~  218 (342)
T 2z72_A          140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISRE  218 (342)
T ss_dssp             TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSCGGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHTT
T ss_pred             CCeEEEEecCCcHHHhhCcccccccccchHHHHhcccHHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhcccC
Confidence            9999999999999988632       2222222211122443   35678999999999887 59999999998763   


Q ss_pred             -CHHHHhhhcCCCCC-----CCcchhhhhhcCCCCCCCCCcccCCCCc-EEecCHHHHHHHHHHcCCCeEEEecccCCCC
Q 023842          179 -NLDQIRNIARPVDV-----PDQGLLCDLLWADPDKDIEGWGENDRGV-SYTFGADKVVEFLQKHDLDLICRAHQILKAS  251 (276)
Q Consensus       179 -~~~~i~~i~r~~~~-----~~~~~~~dllWsdp~~~~~~~~~~~rg~-~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~  251 (276)
                       ++++++.+.|+...     +..+...+++|++|.+   .|   .|+. +..||.+++++|++.+++++|||||+++...
T Consensus       219 ~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~---~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~~~~~  292 (342)
T 2z72_A          219 LTLDKANALYRANVDASKKSLKADDLLNFLFFGNGP---TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTSQERV  292 (342)
T ss_dssp             CCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTST---TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSCCSSC
T ss_pred             CCHHHHHHHhhhhccccccccccCHHHHhccCCCCC---CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCcccch
Confidence             88998887765321     1124567899999863   34   2444 4579999999999999999999999998764


No 10 
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.97  E-value=1.1e-33  Score=255.11  Aligned_cols=190  Identities=20%  Similarity=0.381  Sum_probs=149.0

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG  132 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~  132 (276)
                      |+++|||||||++++|.++|+.++++ +.+.+||+|||||||++|.+++++|.++    |.++++|+||||.+.++..++
T Consensus         1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l~~~~g   76 (280)
T 2dfj_A            1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLLAVFAG   76 (280)
T ss_dssp             -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHHHHHTT
T ss_pred             CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHHhHhcC
Confidence            68999999999999999999999984 5688999999999999999999999886    347999999999999987777


Q ss_pred             chhHHH-----hhhhhhhhHHHhhhhhcCCceEEeCC-eEEEEeCCCCCCCCCHHHHhhhcCCCC----CCCcchhhhhh
Q 023842          133 FYDECK-----RRFNVRVWKTFTDCFNCLPVAALVDE-KILCMHGGLSPDLKNLDQIRNIARPVD----VPDQGLLCDLL  202 (276)
Q Consensus       133 f~~e~~-----~~~~~~~~~~~~~~~~~lPl~~~i~~-~~l~vHaGi~~~~~~~~~i~~i~r~~~----~~~~~~~~dll  202 (276)
                      +.....     +.+.......+.+||+.+|+++.+++ +++|||||++|.+ +++++..+.|+.+    .++...+.+.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~~~~~l  155 (280)
T 2dfj_A           77 ISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPFFLDAM  155 (280)
T ss_dssp             SSCCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHHHHHHT
T ss_pred             CcccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHHHHHHh
Confidence            653211     11122345677899999999988787 8999999999998 7888877766543    34455678999


Q ss_pred             cCCCCCCCCCcccCCCCcE-EecCHHHH--HHHHHHcC-CCeEEEec-ccCCCC
Q 023842          203 WADPDKDIEGWGENDRGVS-YTFGADKV--VEFLQKHD-LDLICRAH-QILKAS  251 (276)
Q Consensus       203 Wsdp~~~~~~~~~~~rg~~-~~fG~~~~--~~fl~~~~-l~~iirgH-e~~~~~  251 (276)
                      |+||.   ..|.++.+|.+ +.||.+++  .+||+.+| +++++|+| |.+.++
T Consensus       156 ~~d~~---~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g  206 (280)
T 2dfj_A          156 YGDMP---NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAP  206 (280)
T ss_dssp             TCSCC---CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSS
T ss_pred             cCCCC---CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCcc
Confidence            99986   56888888875 67887773  55777776 66666666 444433


No 11 
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.93  E-value=3.1e-27  Score=210.84  Aligned_cols=184  Identities=19%  Similarity=0.337  Sum_probs=126.1

Q ss_pred             HHHhhCCCceeecCceeEEeCCCCCHHHHHHHHHhCCCCCC-cceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcC
Q 023842           41 EIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPPE-ANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR  119 (276)
Q Consensus        41 ~~l~~ep~~~~~~~~i~viGDIHG~~~~l~~il~~~~~~~~-~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lr  119 (276)
                      .++.++|++..+.+++++||||||++++|.++++.++..+. +.+||+|||||||+++.++++++.++      .+++|+
T Consensus         6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~~~l~~l~~~------~~~~v~   79 (262)
T 2qjc_A            6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL------GAYSVL   79 (262)
T ss_dssp             --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHHHHHHHHHHH------TCEECC
T ss_pred             cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHHHHHHHHHHC------CCEEEe
Confidence            35677888888888999999999999999999999887765 89999999999999999999998764      589999


Q ss_pred             CCcccchhhhhccchhH-HHhhh---------hhhhhHHHhhhhhcCCceEEeC-CeEEEEeCCCCCCCC----CHHHHh
Q 023842          120 GNHECASINRIYGFYDE-CKRRF---------NVRVWKTFTDCFNCLPVAALVD-EKILCMHGGLSPDLK----NLDQIR  184 (276)
Q Consensus       120 GNHE~~~~~~~~~f~~e-~~~~~---------~~~~~~~~~~~~~~lPl~~~i~-~~~l~vHaGi~~~~~----~~~~i~  184 (276)
                      ||||.+.++..+++..+ +...+         ...+.....+||+.||+++.++ .+++|||||++|...    ..+++.
T Consensus        80 GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~~~~~l~  159 (262)
T 2qjc_A           80 GNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQYEDEVT  159 (262)
T ss_dssp             CHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGCCHHHHH
T ss_pred             CcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccCCHHHHh
Confidence            99999988765555432 12222         1334567789999999998876 479999999998763    223333


Q ss_pred             hhcCCCC---CCCcchhhhhhcCCCCCC-CCCcccCCCCc-EEecCHHHHHHH
Q 023842          185 NIARPVD---VPDQGLLCDLLWADPDKD-IEGWGENDRGV-SYTFGADKVVEF  232 (276)
Q Consensus       185 ~i~r~~~---~~~~~~~~dllWsdp~~~-~~~~~~~~rg~-~~~fG~~~~~~f  232 (276)
                      .+.....   .+..+.  .+.|+||... ...|..+.++. .++|||+++..+
T Consensus       160 ~ir~~~~~~~~~~~G~--~~~~~d~~~~~~~~w~~~~~g~~~vvfGHt~~~~~  210 (262)
T 2qjc_A          160 TMRNLIEKEQEATGGV--TLTATEETNDGGKPWASMWRGPETVVFGHDARRGL  210 (262)
T ss_dssp             HCCEEEEC-------C--CEEEESCSTTCCEEGGGGCCCSSEEEECCCGGGCC
T ss_pred             hhhhcccccccCCCCc--cccccCCCCcCCCChhhccCCCCEEEECCCccccc
Confidence            3322111   111111  3678887421 23455544433 356666665543


No 12 
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.88  E-value=1.1e-22  Score=176.11  Aligned_cols=118  Identities=25%  Similarity=0.340  Sum_probs=91.7

Q ss_pred             cCceeEEeCCCCCHHHHHHHHHhCCCC-CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhc
Q 023842           53 EAPIKICGDVHGQFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIY  131 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~  131 (276)
                      .++++|||||||++.+|.++++.++.. ..+.+||+||++|||+++.++++++..      .++++|+||||.+.++...
T Consensus        12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~~~~~   85 (221)
T 1g5b_A           12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMIDGLS   85 (221)
T ss_dssp             CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHHHHHS
T ss_pred             CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHHhhhc
Confidence            479999999999999999999998775 467899999999999999999887642      3799999999998765432


Q ss_pred             cchhHHH------h------hhhhhhhHHHhhhhhcCCceEEe---CCeEEEEeCCCCCC
Q 023842          132 GFYDECK------R------RFNVRVWKTFTDCFNCLPVAALV---DEKILCMHGGLSPD  176 (276)
Q Consensus       132 ~f~~e~~------~------~~~~~~~~~~~~~~~~lPl~~~i---~~~~l~vHaGi~~~  176 (276)
                      ++.+...      .      .....+.+.+.+||+.+|.+..+   +.+++|||||+++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~  145 (221)
T 1g5b_A           86 ERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD  145 (221)
T ss_dssp             TTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred             cCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence            2211000      0      01234567888999999999866   45899999998764


No 13 
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.74  E-value=8.7e-18  Score=147.66  Aligned_cols=151  Identities=21%  Similarity=0.263  Sum_probs=113.6

Q ss_pred             cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhcc
Q 023842           53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYG  132 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~  132 (276)
                      .|++++||||||++.+|.++++.+.  +.+.+|++||++++|+++.++++++.+++     .+++++||||.........
T Consensus         3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~   75 (246)
T 3rqz_A            3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWACIGRLSL   75 (246)
T ss_dssp             CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHHTCCCCC
T ss_pred             CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHHhccCCc
Confidence            4899999999999999999999876  66889999999999999999999998774     3799999999987643211


Q ss_pred             --c---hhHHHhhhhhhhhHHHhhhhhcCCceEEeCCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCC
Q 023842          133 --F---YDECKRRFNVRVWKTFTDCFNCLPVAALVDEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPD  207 (276)
Q Consensus       133 --f---~~e~~~~~~~~~~~~~~~~~~~lPl~~~i~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~  207 (276)
                        +   ...........+.....+|++.+|.....+ +++++||++....                         |    
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~-------------------------~----  125 (246)
T 3rqz_A           76 DEFNPVARFASYWTTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI-------------------------W----  125 (246)
T ss_dssp             C--CGGGGCHHHHHHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT-------------------------T----
T ss_pred             cccCHHHHHHHHHHHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc-------------------------c----
Confidence              1   111122223456677789999999987755 6999999864311                         0    


Q ss_pred             CCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842          208 KDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK  253 (276)
Q Consensus       208 ~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~  253 (276)
                                   .+.+....+.+.+++.+.++++.||+.....+.
T Consensus       126 -------------~~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~  158 (246)
T 3rqz_A          126 -------------EYIYNARIAALNFPAFDTPLCFVGHTHVPLYIR  158 (246)
T ss_dssp             -------------CCCCSHHHHHHHGGGCCSSEEECCSSSSEEEEE
T ss_pred             -------------cccCChHHHHHHHhccCCCEEEECCcCcccEEE
Confidence                         011234567777888899999999999765443


No 14 
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.72  E-value=2.7e-17  Score=144.17  Aligned_cols=159  Identities=12%  Similarity=0.088  Sum_probs=110.6

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCC---CC--CCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhh
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGG---YP--PEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASIN  128 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~---~~--~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~  128 (276)
                      |++++|||+||++.+|.++++.+.   ..  ..+.+|++||++|+|+++.+++++|.++...  ..+++++||||.....
T Consensus         2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~~~~~~l~~l~~~--~~~~~v~GNhD~~~~~   79 (252)
T 1nnw_A            2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKK--ENVKIIRGKYDQIIAM   79 (252)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHHHHHHHHHHHHHH--SCEEEECCHHHHHHHH
T ss_pred             cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHHHHHHHHHhhHhh--cCeeEEecchHHHhhc
Confidence            689999999999999999988765   43  4588999999999999999999999887632  2599999999987654


Q ss_pred             hhccc-----------h---hHHHhhhhhhhhHHHhhhhhcCCceEEe--CC-eEEEEeCCCCCCCCCHHHHhhhcCCCC
Q 023842          129 RIYGF-----------Y---DECKRRFNVRVWKTFTDCFNCLPVAALV--DE-KILCMHGGLSPDLKNLDQIRNIARPVD  191 (276)
Q Consensus       129 ~~~~f-----------~---~e~~~~~~~~~~~~~~~~~~~lPl~~~i--~~-~~l~vHaGi~~~~~~~~~i~~i~r~~~  191 (276)
                      ....+           .   ..........+.....+|++.+|....+  ++ +++++||++....              
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~--------------  145 (252)
T 1nnw_A           80 SDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF--------------  145 (252)
T ss_dssp             SCTTCSSSGGGGGSSCCHHHHHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT--------------
T ss_pred             cccccCCcccccchhhhHHHHHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc--------------
Confidence            21110           0   0011111233455667899999987654  33 7999999862110              


Q ss_pred             CCCcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHc-CCCeEEEecccCCCCcc
Q 023842          192 VPDQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKH-DLDLICRAHQILKASEK  253 (276)
Q Consensus       192 ~~~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~-~l~~iirgHe~~~~~~~  253 (276)
                             .+.+|.+                  .+.+.+.++++.. +++++|.||........
T Consensus       146 -------~~~~~~~------------------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~  183 (252)
T 1nnw_A          146 -------DGEVLAE------------------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM  183 (252)
T ss_dssp             -------TCCCCSS------------------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE
T ss_pred             -------ccccCCC------------------CCHHHHHHHHhcCCCCCEEEECCccccceEe
Confidence                   0000100                  1235667777777 99999999999876544


No 15 
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.70  E-value=2.7e-17  Score=146.99  Aligned_cols=115  Identities=15%  Similarity=0.089  Sum_probs=89.2

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhc--
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIY--  131 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~--  131 (276)
                      .+++|||||||++.+|.++++.+...+.+.+|++||++++|+++.+++++|.+++     .+++|+||||.+.++...  
T Consensus        12 ~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~~~~~~   86 (270)
T 3qfm_A           12 TKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWHGVRKE   86 (270)
T ss_dssp             EEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHHHHTTC
T ss_pred             cEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHHhhccc
Confidence            3799999999999999999998776677899999999999999999999987652     489999999998776332  


Q ss_pred             -cchhHH-------HhhhhhhhhHHHhhhhhcCCceEEe--CC-eEEEEeCCC
Q 023842          132 -GFYDEC-------KRRFNVRVWKTFTDCFNCLPVAALV--DE-KILCMHGGL  173 (276)
Q Consensus       132 -~f~~e~-------~~~~~~~~~~~~~~~~~~lPl~~~i--~~-~~l~vHaGi  173 (276)
                       ++....       .......+.....+|++.||....+  ++ +++++||.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p  139 (270)
T 3qfm_A           87 LDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP  139 (270)
T ss_dssp             SCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred             cCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence             222111       1111235567778999999998654  44 799999754


No 16 
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.21  E-value=3.5e-11  Score=102.40  Aligned_cols=74  Identities=8%  Similarity=0.090  Sum_probs=56.5

Q ss_pred             cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842           53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI  127 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~  127 (276)
                      .|+++++||+|++...+.++++.+.....+.+|++||++++|..+.+...++..++. .+..+++++||||....
T Consensus         5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~-~~~pv~~v~GNHD~~~~   78 (228)
T 1uf3_A            5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSE-AHLPTAYVPGPQDAPIW   78 (228)
T ss_dssp             CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGG-GCSCEEEECCTTSCSHH
T ss_pred             eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-cCCcEEEECCCCCchhH
Confidence            579999999999999998888765433457899999999999766655555555543 23459999999998653


No 17 
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.21  E-value=1.5e-11  Score=105.46  Aligned_cols=69  Identities=19%  Similarity=0.317  Sum_probs=58.0

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCC--------CcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGK--------QSIETICLLLAYKVKYKENFFLLRGNHECA  125 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~--------~s~evl~~l~~lk~~~p~~v~~lrGNHE~~  125 (276)
                      |+++++||+||++..+.++++.+.....+.+|++||++|+|+        ++.++++++.++.    ..+++++||||..
T Consensus        26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNHD~~  101 (208)
T 1su1_A           26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVRGNCDSE  101 (208)
T ss_dssp             CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECCCTTCCH
T ss_pred             EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEECCCchH
Confidence            789999999999999999988764445688999999999998        3688888887654    3699999999986


Q ss_pred             h
Q 023842          126 S  126 (276)
Q Consensus       126 ~  126 (276)
                      .
T Consensus       102 ~  102 (208)
T 1su1_A          102 V  102 (208)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 18 
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.16  E-value=4.7e-11  Score=101.04  Aligned_cols=65  Identities=18%  Similarity=0.218  Sum_probs=52.1

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASI  127 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~  127 (276)
                      |+++++||+||++..+.++++.+.....+.+|++||++|.     ++++.+.++    +..+++++||||....
T Consensus        26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~   90 (190)
T 1s3l_A           26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC   90 (190)
T ss_dssp             CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred             eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence            7999999999999999999987654556889999999973     555555432    3469999999998754


No 19 
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.08  E-value=7.3e-10  Score=95.19  Aligned_cols=123  Identities=19%  Similarity=0.302  Sum_probs=83.8

Q ss_pred             ecCceeEEeCCCCCHH------HHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842           52 LEAPIKICGDVHGQFS------DLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA  125 (276)
Q Consensus        52 ~~~~i~viGDIHG~~~------~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~  125 (276)
                      +.|+++++||+|++..      .+.++++   ....+.+|++||+++     .+++++|.++.    ..+++++||||..
T Consensus        24 m~m~i~~iSD~H~~~~~~~l~~~l~~~~~---~~~~D~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~GNHD~~   91 (215)
T 2a22_A           24 FGDLVLLIGDLKIPYGAKELPSNFRELLA---TDKINYVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSGDLDSA   91 (215)
T ss_dssp             CCEEEEEECCCCTTTTCSSCCGGGHHHHH---CTTCCEEEECSCCCC-----HHHHHHHHHHC----SCEEECCCTTCCS
T ss_pred             cCcEEEEEecCCCCCChHHHHHHHHHHHh---cCCCCEEEECCCCCC-----HHHHHHHHHcC----CCEEEecCCCcCc
Confidence            4579999999999763      3344443   234578999999997     57777776552    3699999999986


Q ss_pred             hhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEEe--CC-eEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhh
Q 023842          126 SINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAALV--DE-KILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLL  202 (276)
Q Consensus       126 ~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~i--~~-~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dll  202 (276)
                      ....    .               .+|+..+|....+  ++ +++++||.+...                          
T Consensus        92 ~~~~----~---------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~~--------------------------  126 (215)
T 2a22_A           92 IFNP----D---------------PESNGVFPEYVVVQIGEFKIGLMHGNQVLP--------------------------  126 (215)
T ss_dssp             CCBC----C---------------GGGTBCCCSEEEEEETTEEEEEECSTTSSS--------------------------
T ss_pred             cccc----C---------------hhhHhhCCceEEEecCCeEEEEEcCCccCC--------------------------
Confidence            5431    0               1355667754332  33 799999864210                          


Q ss_pred             cCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCC
Q 023842          203 WADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKAS  251 (276)
Q Consensus       203 Wsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~  251 (276)
                      |                    .+.+.+.++++..++++++.||.....-
T Consensus       127 ~--------------------~~~~~l~~~~~~~~~d~vl~GHtH~~~~  155 (215)
T 2a22_A          127 W--------------------DDPGSLEQWQRRLDCDILVTGHTHKLRV  155 (215)
T ss_dssp             T--------------------TCHHHHHHHHHHHTCSEEEECSSCCCEE
T ss_pred             C--------------------CCHHHHHHHHhhcCCCEEEECCcCCCcc
Confidence            0                    1345667777778999999999987643


No 20 
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.08  E-value=5.6e-10  Score=94.15  Aligned_cols=135  Identities=19%  Similarity=0.175  Sum_probs=84.4

Q ss_pred             cCceeEEeCCCCCHHHH-------------HHHHHhCC--CCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEE
Q 023842           53 EAPIKICGDVHGQFSDL-------------LRLFEYGG--YPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFL  117 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~l-------------~~il~~~~--~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~  117 (276)
                      +|+++++||+|+....+             .++++...  ..+.+.+|++||++++|++..++++++.++.    ..+++
T Consensus         1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~l~~l~----~~~~~   76 (195)
T 1xm7_A            1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFNDKNEYLRIWKALP----GRKIL   76 (195)
T ss_dssp             CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCCTTSHHHHHHHSS----SEEEE
T ss_pred             CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHHHHCC----CCEEE
Confidence            47899999999543321             22222221  2356789999999999877778888876653    35999


Q ss_pred             cCCCcccchhhhhccchhHHHhhhhhhhhHHHhhhhhcCCceEE---eC-CeEEEEeCCCCCCCCCHHHHhhhcCCCCCC
Q 023842          118 LRGNHECASINRIYGFYDECKRRFNVRVWKTFTDCFNCLPVAAL---VD-EKILCMHGGLSPDLKNLDQIRNIARPVDVP  193 (276)
Q Consensus       118 lrGNHE~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~lPl~~~---i~-~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~  193 (276)
                      ++||||......        ..     .|       ..+|-...   ++ .+++++|+.+.+..                
T Consensus        77 v~GNhD~~~~~~--------~~-----~~-------~~l~~~~~l~~~~~~~i~~~H~~~~~~~----------------  120 (195)
T 1xm7_A           77 VMGNHDKDKESL--------KE-----YF-------DEIYDFYKIIEHKGKRILLSHYPAKDPI----------------  120 (195)
T ss_dssp             ECCTTCCCHHHH--------TT-----TC-------SEEESSEEEEEETTEEEEEESSCSSCSS----------------
T ss_pred             EeCCCCCchhhh--------hh-----hh-------hchhHHHHHHhcCCcEEEEEccCCcCCC----------------
Confidence            999999854210        00     01       11221111   23 37999998542210                


Q ss_pred             CcchhhhhhcCCCCCCCCCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCc
Q 023842          194 DQGLLCDLLWADPDKDIEGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASE  252 (276)
Q Consensus       194 ~~~~~~dllWsdp~~~~~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~  252 (276)
                                 .     ..+         ..+.+.+.+.++..+++++|.||......+
T Consensus       121 -----------~-----~~~---------~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~  154 (195)
T 1xm7_A          121 -----------T-----ERY---------PDRQEMVREIYFKENCDLLIHGHVHWNREG  154 (195)
T ss_dssp             -----------C-----CSC---------HHHHHHHHHHHHHTTCSEEEECCCCCCSCC
T ss_pred             -----------c-----ccc---------cchHHHHHHHHHHcCCcEEEECCcCCCCcc
Confidence                       0     000         124567788888889999999999876554


No 21 
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.02  E-value=2.5e-10  Score=94.80  Aligned_cols=112  Identities=17%  Similarity=0.119  Sum_probs=77.8

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccchhhhhccc
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECASINRIYGF  133 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f  133 (276)
                      |+++++||+||++.++.++++.+.. ..+.++++||+..      +++..   +   . ..+++++||||....      
T Consensus         7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------~~l~~---l---~-~~~~~v~GNhD~~~~------   66 (176)
T 3ck2_A            7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------RPDSP---L---W-EGIRVVKGNMDFYAG------   66 (176)
T ss_dssp             EEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------CTTCG---G---G-TTEEECCCTTCCSTT------
T ss_pred             cEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------HHHHh---h---h-CCeEEecCcccchhc------
Confidence            6899999999999999999998654 5688999999721      22221   1   1 269999999997531      


Q ss_pred             hhHHHhhhhhhhhHHHhhhhhcCCc--eEEe-CCeEEEEeCCCCCCCCCHHHHhhhcCCCCCCCcchhhhhhcCCCCCCC
Q 023842          134 YDECKRRFNVRVWKTFTDCFNCLPV--AALV-DEKILCMHGGLSPDLKNLDQIRNIARPVDVPDQGLLCDLLWADPDKDI  210 (276)
Q Consensus       134 ~~e~~~~~~~~~~~~~~~~~~~lPl--~~~i-~~~~l~vHaGi~~~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~  210 (276)
                                            +|.  ...+ +.+++++||.+...                          |       
T Consensus        67 ----------------------~p~~~~~~~~~~~i~~~Hg~~~~~--------------------------~-------   91 (176)
T 3ck2_A           67 ----------------------YPERLVTELGSTKIIQTHGHLFDI--------------------------N-------   91 (176)
T ss_dssp             ----------------------CCSEEEEEETTEEEEEECSGGGTT--------------------------T-------
T ss_pred             ----------------------CCcEEEEEECCeEEEEECCCccCC--------------------------C-------
Confidence                                  121  1122 33799999975210                          0       


Q ss_pred             CCcccCCCCcEEecCHHHHHHHHHHcCCCeEEEecccCCCCcc
Q 023842          211 EGWGENDRGVSYTFGADKVVEFLQKHDLDLICRAHQILKASEK  253 (276)
Q Consensus       211 ~~~~~~~rg~~~~fG~~~~~~fl~~~~l~~iirgHe~~~~~~~  253 (276)
                                   .+.+.+.++++..++++++.||.......+
T Consensus        92 -------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~  121 (176)
T 3ck2_A           92 -------------FNFQKLDYWAQEEEAAICLYGHLHVPSAWL  121 (176)
T ss_dssp             -------------TCSHHHHHHHHHTTCSEEECCSSCCEEEEE
T ss_pred             -------------CCHHHHHHHHHhcCCCEEEECCcCCCCcEE
Confidence                         133557777888899999999998765543


No 22 
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.99  E-value=1.5e-10  Score=97.00  Aligned_cols=62  Identities=24%  Similarity=0.351  Sum_probs=49.9

Q ss_pred             CceeEEeCCCC--CHHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842           54 APIKICGDVHG--QFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECA  125 (276)
Q Consensus        54 ~~i~viGDIHG--~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~  125 (276)
                      |+++++||+||  +..+|.++++.+. .+.+.+|++||++|+     +++++|..+.    ..+++++||||..
T Consensus        23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~   86 (178)
T 2kkn_A           23 KRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP   86 (178)
T ss_dssp             EEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred             eEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence            69999999997  7777888887654 456889999999983     7778776652    3599999999975


No 23 
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.96  E-value=1.6e-09  Score=91.17  Aligned_cols=64  Identities=17%  Similarity=0.171  Sum_probs=45.6

Q ss_pred             CceeEEeCCCCCHH--HHHHHHHh-CCCCCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccch
Q 023842           54 APIKICGDVHGQFS--DLLRLFEY-GGYPPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECAS  126 (276)
Q Consensus        54 ~~i~viGDIHG~~~--~l~~il~~-~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~  126 (276)
                      |+++++||+|++..  ++.+.+.. +.....+.+|++||+++     .+++++|.++.    ..+++++||||...
T Consensus        11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~~~   77 (192)
T 1z2w_A           11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDENL   77 (192)
T ss_dssp             CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCCCT
T ss_pred             eEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCccc
Confidence            78999999999743  23333332 33344578999999996     57777776542    36999999999864


No 24 
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=98.83  E-value=5.9e-09  Score=93.66  Aligned_cols=73  Identities=19%  Similarity=0.226  Sum_probs=50.5

Q ss_pred             cCceeEEeCCCCC------------HHHHHHHHHhCCC--CCCcceeeecCcccCCCCc-HH-HHHHHHHHhhhcCCcEE
Q 023842           53 EAPIKICGDVHGQ------------FSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQS-IE-TICLLLAYKVKYKENFF  116 (276)
Q Consensus        53 ~~~i~viGDIHG~------------~~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s-~e-vl~~l~~lk~~~p~~v~  116 (276)
                      .++++++||+|..            ...|.++++.+..  ...+.+|++||+++.|... .+ +..++..+.....-.++
T Consensus        25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~  104 (330)
T 3ib7_A           25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV  104 (330)
T ss_dssp             SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred             CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEE
Confidence            5899999999962            7788888877553  4557889999999998632 22 22233322222244699


Q ss_pred             EcCCCcccc
Q 023842          117 LLRGNHECA  125 (276)
Q Consensus       117 ~lrGNHE~~  125 (276)
                      +++||||..
T Consensus       105 ~v~GNHD~~  113 (330)
T 3ib7_A          105 WVMGNHDDR  113 (330)
T ss_dssp             ECCCTTSCH
T ss_pred             EeCCCCCCH
Confidence            999999973


No 25 
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=98.76  E-value=2.3e-09  Score=93.37  Aligned_cols=74  Identities=8%  Similarity=0.038  Sum_probs=54.6

Q ss_pred             cCceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCc--------------------------HHHHHHHHH
Q 023842           53 EAPIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--------------------------IETICLLLA  106 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s--------------------------~evl~~l~~  106 (276)
                      .|+++++||+|++...+.++++.+.....+.+|++||++|+|+.+                          .....++..
T Consensus         5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~   84 (260)
T 2yvt_A            5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE   84 (260)
T ss_dssp             CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence            479999999999999998888875444568899999999998652                          123333433


Q ss_pred             HhhhcCCcEEEcCCCcccchh
Q 023842          107 YKVKYKENFFLLRGNHECASI  127 (276)
Q Consensus       107 lk~~~p~~v~~lrGNHE~~~~  127 (276)
                      ++. .+..+++++||||....
T Consensus        85 l~~-~~~pv~~v~GNHD~~~~  104 (260)
T 2yvt_A           85 IGE-LGVKTFVVPGKNDAPLK  104 (260)
T ss_dssp             HHT-TCSEEEEECCTTSCCHH
T ss_pred             HHh-cCCcEEEEcCCCCchhh
Confidence            432 23469999999998653


No 26 
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=98.33  E-value=6.5e-07  Score=77.95  Aligned_cols=70  Identities=14%  Similarity=0.123  Sum_probs=48.5

Q ss_pred             CceeEEeCCCCCH------------HHHHHHHHhCCC--CCCcceeeecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcC
Q 023842           54 APIKICGDVHGQF------------SDLLRLFEYGGY--PPEANYLFLGDYVDRGKQSIETICLLLAYKVKYKENFFLLR  119 (276)
Q Consensus        54 ~~i~viGDIHG~~------------~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lr  119 (276)
                      |+++++||+|+..            ..|.++++.+..  +..+.+|++||+++.|..+  -+..+.+.-...+-.+++++
T Consensus         1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~l~~p~~~v~   78 (274)
T 3d03_A            1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPE--EYQVARQILGSLNYPLYLIP   78 (274)
T ss_dssp             CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHH--HHHHHHHHHTTCSSCEEEEC
T ss_pred             CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHH--HHHHHHHHHHhcCCCEEEEC
Confidence            6899999999984            678888876543  2357889999999988642  12222222112233599999


Q ss_pred             CCcccc
Q 023842          120 GNHECA  125 (276)
Q Consensus       120 GNHE~~  125 (276)
                      ||||..
T Consensus        79 GNHD~~   84 (274)
T 3d03_A           79 GNHDDK   84 (274)
T ss_dssp             CTTSCH
T ss_pred             CCCCCH
Confidence            999985


No 27 
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.28  E-value=4.9e-07  Score=81.51  Aligned_cols=64  Identities=20%  Similarity=0.167  Sum_probs=45.5

Q ss_pred             CceeEEeCCCCCHHHHHHHHHhCCCCCCcceeeecCcccCCCCc--HHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842           54 APIKICGDVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--IETICLLLAYKVKYKENFFLLRGNHECASI  127 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s--~evl~~l~~lk~~~p~~v~~lrGNHE~~~~  127 (276)
                      ||+++|||+|++...+       ..+..|.+|++||++++|...  .+++++|.++   ....++++.||||..+-
T Consensus        60 mri~~iSD~H~~~~~l-------~i~~~D~vi~aGDl~~~g~~~e~~~~~~~L~~l---~~~~v~~V~GNHD~~~d  125 (296)
T 3rl5_A           60 TRFVCISDTRSRTDGI-------QMPYGDILLHTGDFTELGLPSEVKKFNDWLGNL---PYEYKIVIAGNHELTFD  125 (296)
T ss_dssp             EEEEEEBCCTTCCTTC-------CCCSCSEEEECSCCSSSCCHHHHHHHHHHHHTS---CCSEEEECCCTTCGGGC
T ss_pred             eEEEEEeeCCCCcchh-------ccCCCCEEEECCcccCCCCHHHHHHHHHHHHhC---CCCeEEEEcCCcccccc
Confidence            7899999999997643       345668899999999999732  2233333322   11348999999998643


No 28 
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.23  E-value=8.5e-07  Score=80.64  Aligned_cols=78  Identities=23%  Similarity=0.266  Sum_probs=50.4

Q ss_pred             CCceee-cCceeEEeCCC-C----C-----------HHHHHHHHHhCCCCCCcceeeecC-cccCCCCcHHH----HHHH
Q 023842           47 PNLLEL-EAPIKICGDVH-G----Q-----------FSDLLRLFEYGGYPPEANYLFLGD-YVDRGKQSIET----ICLL  104 (276)
Q Consensus        47 p~~~~~-~~~i~viGDIH-G----~-----------~~~l~~il~~~~~~~~~~~vfLGD-~VDrG~~s~ev----l~~l  104 (276)
                      ..+++. .|+++.+||+| |    .           ...|.++++.+.....+-+|+.|| ++|++..+.+.    .+++
T Consensus        11 ~~~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l   90 (336)
T 2q8u_A           11 HHVINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYL   90 (336)
T ss_dssp             CCCTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHH
T ss_pred             hhheecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHH
Confidence            344444 58999999999 8    3           456667766554445578899999 99999877654    4445


Q ss_pred             HHHhhhcCCcEEEcCCCcccch
Q 023842          105 LAYKVKYKENFFLLRGNHECAS  126 (276)
Q Consensus       105 ~~lk~~~p~~v~~lrGNHE~~~  126 (276)
                      ..++..  -.++++.||||...
T Consensus        91 ~~L~~~--~pv~~i~GNHD~~~  110 (336)
T 2q8u_A           91 KRMMRT--APVVVLPGNHDWKG  110 (336)
T ss_dssp             HHHHHH--SCEEECCC------
T ss_pred             HHHHhc--CCEEEECCCCCccc
Confidence            454422  35999999999864


No 29 
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.23  E-value=1.5e-06  Score=80.74  Aligned_cols=73  Identities=12%  Similarity=0.102  Sum_probs=52.0

Q ss_pred             cCceeEEeCCCCCH-------------HHHHHHHHhCCCCCCcceeeecCcccCCCCcHHH----HHHHHHHhhhcCCcE
Q 023842           53 EAPIKICGDVHGQF-------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIET----ICLLLAYKVKYKENF  115 (276)
Q Consensus        53 ~~~i~viGDIHG~~-------------~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~ev----l~~l~~lk~~~p~~v  115 (276)
                      .|+++.+||+|+..             ..|.++++.+.....+.+|+.||++|++..+.+.    ...|..++. .+-.+
T Consensus        20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~-~~~pv   98 (386)
T 3av0_A           20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE-NNIKV   98 (386)
T ss_dssp             CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH-TTCEE
T ss_pred             CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh-cCCcE
Confidence            58999999999762             4577777766555568899999999999544433    334444432 23369


Q ss_pred             EEcCCCcccch
Q 023842          116 FLLRGNHECAS  126 (276)
Q Consensus       116 ~~lrGNHE~~~  126 (276)
                      +++.||||...
T Consensus        99 ~~v~GNHD~~~  109 (386)
T 3av0_A           99 YIVAGNHEMPR  109 (386)
T ss_dssp             EECCCGGGSCS
T ss_pred             EEEcCCCCCCc
Confidence            99999999864


No 30 
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.15  E-value=1.9e-06  Score=78.35  Aligned_cols=71  Identities=20%  Similarity=0.188  Sum_probs=49.0

Q ss_pred             CceeEEeCCCCCH-------------HHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHH----HHHHhhhcCCcEE
Q 023842           54 APIKICGDVHGQF-------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICL----LLAYKVKYKENFF  116 (276)
Q Consensus        54 ~~i~viGDIHG~~-------------~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~----l~~lk~~~p~~v~  116 (276)
                      |+++.+||+|...             ..|.++++.+.....+.+|+.||++|++..+.+.+..    +..++. .+-.++
T Consensus         1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~-~~~~v~   79 (333)
T 1ii7_A            1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKE-HSIPVF   79 (333)
T ss_dssp             CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-TTCCEE
T ss_pred             CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-CCCcEE
Confidence            6899999999864             4556666654444557899999999987555444333    333321 234699


Q ss_pred             EcCCCcccc
Q 023842          117 LLRGNHECA  125 (276)
Q Consensus       117 ~lrGNHE~~  125 (276)
                      ++.||||..
T Consensus        80 ~v~GNHD~~   88 (333)
T 1ii7_A           80 AIEGNHDRT   88 (333)
T ss_dssp             EECCTTTCC
T ss_pred             EeCCcCCCc
Confidence            999999985


No 31 
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=98.15  E-value=7.5e-07  Score=78.91  Aligned_cols=74  Identities=18%  Similarity=0.056  Sum_probs=51.2

Q ss_pred             cCceeEEeCCCCCH-------------------HHHHHHHHhCCCCCCcceeeecCcccCCCC----cHHHHHHHHHHhh
Q 023842           53 EAPIKICGDVHGQF-------------------SDLLRLFEYGGYPPEANYLFLGDYVDRGKQ----SIETICLLLAYKV  109 (276)
Q Consensus        53 ~~~i~viGDIHG~~-------------------~~l~~il~~~~~~~~~~~vfLGD~VDrG~~----s~evl~~l~~lk~  109 (276)
                      .++++++||+|...                   ..|.++++.+.....+.+|++||+++.+..    +.+.+..+.+.-.
T Consensus         5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l~   84 (322)
T 2nxf_A            5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD   84 (322)
T ss_dssp             SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred             ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHHH
Confidence            47899999999875                   557777665433456789999999998751    2344444443322


Q ss_pred             hcCCcEEEcCCCcccch
Q 023842          110 KYKENFFLLRGNHECAS  126 (276)
Q Consensus       110 ~~p~~v~~lrGNHE~~~  126 (276)
                      ..+..++++.||||...
T Consensus        85 ~~~~p~~~v~GNHD~~~  101 (322)
T 2nxf_A           85 ACSVDVHHVWGNHEFYN  101 (322)
T ss_dssp             TTCSEEEECCCHHHHHH
T ss_pred             hcCCcEEEecCCCCccc
Confidence            23456999999999853


No 32 
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=97.88  E-value=8.4e-06  Score=76.55  Aligned_cols=73  Identities=18%  Similarity=0.184  Sum_probs=49.2

Q ss_pred             cCceeEEeCCCCC--------------------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCc--HHHHHHH
Q 023842           53 EAPIKICGDVHGQ--------------------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQS--IETICLL  104 (276)
Q Consensus        53 ~~~i~viGDIHG~--------------------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s--~evl~~l  104 (276)
                      .+++++++|+|..                          ...+.++++.+.....+.+|++||+++.|...  .++...+
T Consensus        39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l  118 (443)
T 2xmo_A           39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKL  118 (443)
T ss_dssp             CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHH
Confidence            4689999999973                          45666676654333457789999999988643  2233334


Q ss_pred             HHHhhhcCCcEEEcCCCcccch
Q 023842          105 LAYKVKYKENFFLLRGNHECAS  126 (276)
Q Consensus       105 ~~lk~~~p~~v~~lrGNHE~~~  126 (276)
                      ..+. ..+-.+++++||||...
T Consensus       119 ~~l~-~~~~~~~~v~GNHD~~~  139 (443)
T 2xmo_A          119 TQVE-KNGTQVFVVPGNHDINN  139 (443)
T ss_dssp             HHHH-HTTCEEEEECCTTTSSC
T ss_pred             HHHH-hCCCeEEEECCcCCCCC
Confidence            3332 12346999999999854


No 33 
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=97.82  E-value=6.9e-06  Score=76.24  Aligned_cols=70  Identities=20%  Similarity=0.204  Sum_probs=48.7

Q ss_pred             CceeEEeCCCCCHH----------------HHHHHHHhCCCCCCcceeeecCcc-cCCCCcHHHHH----HHHHHhhhcC
Q 023842           54 APIKICGDVHGQFS----------------DLLRLFEYGGYPPEANYLFLGDYV-DRGKQSIETIC----LLLAYKVKYK  112 (276)
Q Consensus        54 ~~i~viGDIHG~~~----------------~l~~il~~~~~~~~~~~vfLGD~V-DrG~~s~evl~----~l~~lk~~~p  112 (276)
                      |+++.++|+|....                .|.++++.+.....+.+|+.||++ |++..+.+.+.    ++..|+..  
T Consensus         1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~--   78 (379)
T 3tho_B            1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT--   78 (379)
T ss_dssp             CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH--
T ss_pred             CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC--
Confidence            68999999997543                556666544334557899999999 88876655433    33333322  


Q ss_pred             CcEEEcCCCcccc
Q 023842          113 ENFFLLRGNHECA  125 (276)
Q Consensus       113 ~~v~~lrGNHE~~  125 (276)
                      -.++++.||||..
T Consensus        79 ~~v~~i~GNHD~~   91 (379)
T 3tho_B           79 APVVVLPGNQDWK   91 (379)
T ss_dssp             SCEEECCCTTSCT
T ss_pred             CCEEEEcCCCccc
Confidence            4699999999954


No 34 
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=97.65  E-value=3.6e-05  Score=72.79  Aligned_cols=55  Identities=22%  Similarity=0.209  Sum_probs=41.5

Q ss_pred             cCceeEEeCCCCC------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHHH
Q 023842           53 EAPIKICGDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAY  107 (276)
Q Consensus        53 ~~~i~viGDIHG~------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~l  107 (276)
                      .++++.++|+|-.            ...|.++++.+.....+.+|+.||++|++..+.+++..+++.
T Consensus        32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~   98 (431)
T 3t1i_A           32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLEL   98 (431)
T ss_dssp             EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHH
T ss_pred             CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHH
Confidence            4789999999953            235667776554456688999999999999888776665554


No 35 
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=97.65  E-value=5.3e-05  Score=71.32  Aligned_cols=54  Identities=22%  Similarity=0.207  Sum_probs=41.8

Q ss_pred             cCceeEEeCCCCC------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHH
Q 023842           53 EAPIKICGDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLA  106 (276)
Q Consensus        53 ~~~i~viGDIHG~------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~  106 (276)
                      .++++.++|+|-.            ...|.++++.+.....+.+|+.||++|++..+.+++..+++
T Consensus        13 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~   78 (417)
T 4fbw_A           13 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALR   78 (417)
T ss_dssp             CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHH
T ss_pred             CeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHH
Confidence            4789999999965            35677777766555668899999999999988877665443


No 36 
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=97.64  E-value=5.9e-05  Score=71.90  Aligned_cols=54  Identities=22%  Similarity=0.207  Sum_probs=41.7

Q ss_pred             cCceeEEeCCCCC------------HHHHHHHHHhCCCCCCcceeeecCcccCCCCcHHHHHHHHH
Q 023842           53 EAPIKICGDVHGQ------------FSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLA  106 (276)
Q Consensus        53 ~~~i~viGDIHG~------------~~~l~~il~~~~~~~~~~~vfLGD~VDrG~~s~evl~~l~~  106 (276)
                      .++++.++|+|-.            ...|.++++.+.....+.+|+.||++|++..+.+++..+++
T Consensus        76 ~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~  141 (472)
T 4fbk_A           76 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALR  141 (472)
T ss_dssp             CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHH
T ss_pred             CeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHH
Confidence            3689999999964            34677777765555668899999999999998887665443


No 37 
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=97.13  E-value=0.00014  Score=63.94  Aligned_cols=73  Identities=15%  Similarity=-0.001  Sum_probs=41.8

Q ss_pred             cCceeEEeCCCCCH---------HHHHHHHHh-CCCCCCcceeeecCcccCC----CCcHHHHHHHHHHhh--hc-CCcE
Q 023842           53 EAPIKICGDVHGQF---------SDLLRLFEY-GGYPPEANYLFLGDYVDRG----KQSIETICLLLAYKV--KY-KENF  115 (276)
Q Consensus        53 ~~~i~viGDIHG~~---------~~l~~il~~-~~~~~~~~~vfLGD~VDrG----~~s~evl~~l~~lk~--~~-p~~v  115 (276)
                      +++++++||+|...         ..+.+.+.. +.....+-+|++||++...    ....+....+..+..  .. +-.+
T Consensus         6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p~   85 (313)
T 1ute_A            6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPW   85 (313)
T ss_dssp             CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCCE
T ss_pred             ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCCE
Confidence            46899999999862         233333332 2223457789999997531    111222222221110  12 4469


Q ss_pred             EEcCCCcccc
Q 023842          116 FLLRGNHECA  125 (276)
Q Consensus       116 ~~lrGNHE~~  125 (276)
                      +++.||||..
T Consensus        86 ~~v~GNHD~~   95 (313)
T 1ute_A           86 HVLAGNHDHL   95 (313)
T ss_dssp             EECCCHHHHH
T ss_pred             EEECCCCccC
Confidence            9999999985


No 38 
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=96.87  E-value=0.001  Score=62.13  Aligned_cols=71  Identities=15%  Similarity=0.117  Sum_probs=43.4

Q ss_pred             cCceeEEeCCCCCHHHHHHHHHhCCC--CCCcceeeecCcccCCCCc------H-HHHHHHHHHhhhcCCcEEEcCCCcc
Q 023842           53 EAPIKICGDVHGQFSDLLRLFEYGGY--PPEANYLFLGDYVDRGKQS------I-ETICLLLAYKVKYKENFFLLRGNHE  123 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~l~~il~~~~~--~~~~~~vfLGD~VDrG~~s------~-evl~~l~~lk~~~p~~v~~lrGNHE  123 (276)
                      +.+++++||+|....... .++.+..  ...+-+|++||+++.+..+      . +...++..+..  .-.++.+.||||
T Consensus       119 ~~~f~~igD~~~~~~~~~-~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~--~~P~~~v~GNHD  195 (424)
T 2qfp_A          119 PYTFGLIGDLGQSFDSNT-TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVA--YQPWIWTAGNHE  195 (424)
T ss_dssp             CEEEEEECSCTTBHHHHH-HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHT--TSCEEECCCHHH
T ss_pred             CeEEEEEEeCCCCCChHH-HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHh--cCCeEeecCCcc
Confidence            457999999998876543 3333222  2457788999999864211      1 12223333322  235899999999


Q ss_pred             cch
Q 023842          124 CAS  126 (276)
Q Consensus       124 ~~~  126 (276)
                      ...
T Consensus       196 ~~~  198 (424)
T 2qfp_A          196 IEF  198 (424)
T ss_dssp             HCC
T ss_pred             ccc
Confidence            863


No 39 
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=96.56  E-value=0.002  Score=60.15  Aligned_cols=70  Identities=16%  Similarity=0.138  Sum_probs=41.7

Q ss_pred             cCceeEEeCCCCCHHH---HHHHHHhCCCCCCcceeeecCcccCCCC-----c-HH-HHHHHHHHhhhcCCcEEEcCCCc
Q 023842           53 EAPIKICGDVHGQFSD---LLRLFEYGGYPPEANYLFLGDYVDRGKQ-----S-IE-TICLLLAYKVKYKENFFLLRGNH  122 (276)
Q Consensus        53 ~~~i~viGDIHG~~~~---l~~il~~~~~~~~~~~vfLGD~VDrG~~-----s-~e-vl~~l~~lk~~~p~~v~~lrGNH  122 (276)
                      +.+++++||+|.....   +.++.+.  ....+-+|++||++..+..     . .+ ....+..+..  .-.++.+.|||
T Consensus       126 ~~~f~~~gD~~~~~~~~~~l~~i~~~--~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~--~~P~~~v~GNH  201 (426)
T 1xzw_A          126 PYVFGLIGDIGQTHDSNTTLTHYEQN--SAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVA--YQPWIWTAGNH  201 (426)
T ss_dssp             CEEEEEECSCTTBHHHHHHHHHHHHC--TTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHT--TSCEECCCCGG
T ss_pred             CeEEEEEEeCCCCCchHHHHHHHHhC--CCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHh--cCCEEEecccc
Confidence            3579999999987532   3333221  1245778899999965321     1 11 2223333322  23589999999


Q ss_pred             ccch
Q 023842          123 ECAS  126 (276)
Q Consensus       123 E~~~  126 (276)
                      |...
T Consensus       202 D~~~  205 (426)
T 1xzw_A          202 EIDY  205 (426)
T ss_dssp             GCCC
T ss_pred             cccc
Confidence            9864


No 40 
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=95.44  E-value=0.0027  Score=58.01  Aligned_cols=73  Identities=10%  Similarity=0.036  Sum_probs=41.9

Q ss_pred             CceeEEeCCCCCHHHHHH----HHHhCCCCCCcceeeecCcccCCCCcH------HHHHHHHHHh-hhcCCcEEEcCCCc
Q 023842           54 APIKICGDVHGQFSDLLR----LFEYGGYPPEANYLFLGDYVDRGKQSI------ETICLLLAYK-VKYKENFFLLRGNH  122 (276)
Q Consensus        54 ~~i~viGDIHG~~~~l~~----il~~~~~~~~~~~vfLGD~VDrG~~s~------evl~~l~~lk-~~~p~~v~~lrGNH  122 (276)
                      -++++|||.|.....-.+    +.+.+...+.+-+|++||+++.|..+.      +.++.++... ....-.++.+.|||
T Consensus         4 l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlGNH   83 (342)
T 3tgh_A            4 LRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTR   83 (342)
T ss_dssp             EEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCCHH
T ss_pred             EEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCCCC
Confidence            478999999965322211    111122244577899999998886431      2222222110 11222479999999


Q ss_pred             ccch
Q 023842          123 ECAS  126 (276)
Q Consensus       123 E~~~  126 (276)
                      |..-
T Consensus        84 D~~~   87 (342)
T 3tgh_A           84 DWTG   87 (342)
T ss_dssp             HHTS
T ss_pred             ccCC
Confidence            9863


No 41 
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=95.22  E-value=0.01  Score=56.89  Aligned_cols=68  Identities=18%  Similarity=0.024  Sum_probs=42.7

Q ss_pred             cCceeEEeCCCCCHH----------HHHHHHHhCCC-----CCCcceeeecCcccCCCC-----cHHHHHHHHHHhhhcC
Q 023842           53 EAPIKICGDVHGQFS----------DLLRLFEYGGY-----PPEANYLFLGDYVDRGKQ-----SIETICLLLAYKVKYK  112 (276)
Q Consensus        53 ~~~i~viGDIHG~~~----------~l~~il~~~~~-----~~~~~~vfLGD~VDrG~~-----s~evl~~l~~lk~~~p  112 (276)
                      ..+|+.++|+||++.          .+..+++++..     .+.+-++..||+++..+.     ...++..|-.+.   +
T Consensus         8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg---~   84 (516)
T 1hp1_A            8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y   84 (516)
T ss_dssp             EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C
T ss_pred             EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---C
Confidence            468999999999742          45555544321     123456678999976542     234555555543   2


Q ss_pred             CcEEEcCCCcccc
Q 023842          113 ENFFLLRGNHECA  125 (276)
Q Consensus       113 ~~v~~lrGNHE~~  125 (276)
                        -++..||||..
T Consensus        85 --d~~~~GNHEfd   95 (516)
T 1hp1_A           85 --DAMAIGNHEFD   95 (516)
T ss_dssp             --CEEECCGGGGS
T ss_pred             --CEEeecccccc
Confidence              25678999973


No 42 
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=94.86  E-value=0.018  Score=55.41  Aligned_cols=67  Identities=18%  Similarity=0.153  Sum_probs=42.9

Q ss_pred             cCceeEEeCCCCCH----------------HHHHHHHHhCCCCCCc-ceeeecCcccCCCCc----------HHHHHHHH
Q 023842           53 EAPIKICGDVHGQF----------------SDLLRLFEYGGYPPEA-NYLFLGDYVDRGKQS----------IETICLLL  105 (276)
Q Consensus        53 ~~~i~viGDIHG~~----------------~~l~~il~~~~~~~~~-~~vfLGD~VDrG~~s----------~evl~~l~  105 (276)
                      ..+|+.++|+||++                ..+..++++......+ -++..||.++..+.+          ..+++.|-
T Consensus        19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ln   98 (527)
T 3qfk_A           19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYN   98 (527)
T ss_dssp             EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHHH
T ss_pred             cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHHH
Confidence            46899999999985                2566666654333333 345579999977443          34555554


Q ss_pred             HHhhhcCCcEEEcCCCccc
Q 023842          106 AYKVKYKENFFLLRGNHEC  124 (276)
Q Consensus       106 ~lk~~~p~~v~~lrGNHE~  124 (276)
                      .+.    -. ++..||||.
T Consensus        99 ~lg----~D-~~t~GNHef  112 (527)
T 3qfk_A           99 RMA----FD-FGTLGNHEF  112 (527)
T ss_dssp             HTC----CC-EECCCGGGG
T ss_pred             hcC----Cc-EEecccccc
Confidence            442    12 456899994


No 43 
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=94.41  E-value=0.016  Score=51.44  Aligned_cols=70  Identities=17%  Similarity=0.156  Sum_probs=43.0

Q ss_pred             ecCceeEEeCCCCCH--HHHHHHHHhCCCC-CCcceeeecCcccCC-CCcHHHHHHHHHHhhhcCCcEEEcCCCcccch
Q 023842           52 LEAPIKICGDVHGQF--SDLLRLFEYGGYP-PEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECAS  126 (276)
Q Consensus        52 ~~~~i~viGDIHG~~--~~l~~il~~~~~~-~~~~~vfLGD~VDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~  126 (276)
                      ..|+++++|||||..  ..+...+.+.... +.+.+++.||-.--| +-+..+...|..+..    .+..+ ||||.-.
T Consensus         3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~~~~~~ln~~G~----Da~Tl-GNHefD~   76 (281)
T 1t71_A            3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGV----NYITM-GNHTWFQ   76 (281)
T ss_dssp             CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTC----CEEEC-CTTTTCC
T ss_pred             ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCC----CEEEE-ccCcccC
Confidence            368999999999874  2333334332211 234566666665434 456777888777642    45544 9999753


No 44 
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=94.08  E-value=0.033  Score=53.86  Aligned_cols=69  Identities=16%  Similarity=0.183  Sum_probs=43.5

Q ss_pred             ecCceeEEeCCCCCH-----------------HHHHHHHHhCCCC-CCcceeeecCcccCCCC-----cHHHHHHHHHHh
Q 023842           52 LEAPIKICGDVHGQF-----------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQ-----SIETICLLLAYK  108 (276)
Q Consensus        52 ~~~~i~viGDIHG~~-----------------~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~-----s~evl~~l~~lk  108 (276)
                      ...+|+.++|+||++                 ..+..+++++... ++.-++..||+++..+.     ...+++.|-.+.
T Consensus        28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~lg  107 (552)
T 2z1a_A           28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLR  107 (552)
T ss_dssp             CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHTT
T ss_pred             eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhcC
Confidence            356799999999763                 4566666554322 23345668999997653     234555554442


Q ss_pred             hhcCCcEEEcCCCcccc
Q 023842          109 VKYKENFFLLRGNHECA  125 (276)
Q Consensus       109 ~~~p~~v~~lrGNHE~~  125 (276)
                         +  -++..||||..
T Consensus       108 ---~--d~~~lGNHEfd  119 (552)
T 2z1a_A          108 ---Y--RAMALGNHEFD  119 (552)
T ss_dssp             ---C--CEEECCGGGGT
T ss_pred             ---C--Ccccccccccc
Confidence               2  25677999974


No 45 
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=93.69  E-value=0.034  Score=53.77  Aligned_cols=67  Identities=24%  Similarity=0.227  Sum_probs=43.3

Q ss_pred             cCceeEEeCCCCCH--------------------HHHHHHHHhCCCC-CCcceeeecCcccCCCCc-----HHHHHHHHH
Q 023842           53 EAPIKICGDVHGQF--------------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGKQS-----IETICLLLA  106 (276)
Q Consensus        53 ~~~i~viGDIHG~~--------------------~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~s-----~evl~~l~~  106 (276)
                      +-+|+.++|+||++                    ..+..+++++... +.+-++..||.++..+.+     ..++..|-.
T Consensus        25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~ln~  104 (546)
T 4h2g_A           25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA  104 (546)
T ss_dssp             EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred             EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHHHh
Confidence            46799999999863                    5566666553322 234566789999977532     445555555


Q ss_pred             HhhhcCCcEEEcCCCccc
Q 023842          107 YKVKYKENFFLLRGNHEC  124 (276)
Q Consensus       107 lk~~~p~~v~~lrGNHE~  124 (276)
                      +.   . . ++..||||.
T Consensus       105 lg---~-d-~~~~GNHEf  117 (546)
T 4h2g_A          105 LR---Y-D-AMALGNHEF  117 (546)
T ss_dssp             HT---C-S-EEECCGGGG
T ss_pred             cC---C-c-EEeccCccc
Confidence            43   2 2 566899996


No 46 
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=93.26  E-value=0.026  Score=54.02  Aligned_cols=67  Identities=21%  Similarity=0.326  Sum_probs=39.1

Q ss_pred             cCceeEEeCCCCC------------------HHHHHHHHHhCCCCCCcceee-ecCcccCCCC-----cHHHHHHHHHHh
Q 023842           53 EAPIKICGDVHGQ------------------FSDLLRLFEYGGYPPEANYLF-LGDYVDRGKQ-----SIETICLLLAYK  108 (276)
Q Consensus        53 ~~~i~viGDIHG~------------------~~~l~~il~~~~~~~~~~~vf-LGD~VDrG~~-----s~evl~~l~~lk  108 (276)
                      +.+|+.++|+||+                  +..+..++++......+.+++ .||.++..+.     ...+++.|-.+ 
T Consensus         6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~l-   84 (509)
T 3ive_A            6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTM-   84 (509)
T ss_dssp             EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTS-
T ss_pred             EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhc-
Confidence            4578999999986                  445555655433223344555 8999984321     13344444322 


Q ss_pred             hhcCCcEEEcCCCccc
Q 023842          109 VKYKENFFLLRGNHEC  124 (276)
Q Consensus       109 ~~~p~~v~~lrGNHE~  124 (276)
                        .+ . ++..||||.
T Consensus        85 --g~-D-~~tlGNHEf   96 (509)
T 3ive_A           85 --PF-D-AVTIGNHEF   96 (509)
T ss_dssp             --CC-S-EECCCGGGG
T ss_pred             --CC-c-EEeeccccc
Confidence              22 2 456799995


No 47 
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=92.90  E-value=0.074  Score=51.78  Aligned_cols=68  Identities=19%  Similarity=0.148  Sum_probs=42.1

Q ss_pred             ecCceeEEeCCCCCH---------------------HHHHHHHHhCCCC-CCcceeeecCcccCCC-----CcHHHHHHH
Q 023842           52 LEAPIKICGDVHGQF---------------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGK-----QSIETICLL  104 (276)
Q Consensus        52 ~~~~i~viGDIHG~~---------------------~~l~~il~~~~~~-~~~~~vfLGD~VDrG~-----~s~evl~~l  104 (276)
                      .+-+|+.++|+||++                     ..+..+++.+... +..-++..||.++..+     ....+++.|
T Consensus        11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l   90 (579)
T 3ztv_A           11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM   90 (579)
T ss_dssp             EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred             eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence            346799999999884                     3455555543322 2334566899998653     234455555


Q ss_pred             HHHhhhcCCcEEEcCCCccc
Q 023842          105 LAYKVKYKENFFLLRGNHEC  124 (276)
Q Consensus       105 ~~lk~~~p~~v~~lrGNHE~  124 (276)
                      -.+.   . . ++..||||.
T Consensus        91 n~lg---~-D-~~tlGNHEf  105 (579)
T 3ztv_A           91 NAGN---F-H-YFTLGNHEF  105 (579)
T ss_dssp             HHHT---C-S-EEECCSGGG
T ss_pred             HhcC---c-C-eeecccccc
Confidence            5543   2 3 456799995


No 48 
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=92.55  E-value=0.1  Score=45.56  Aligned_cols=67  Identities=13%  Similarity=0.002  Sum_probs=45.6

Q ss_pred             CceeEEeCCCCC--HHHHHHHHHhCCCCCCcceee-ecCcccCCCCcHHHHHHHHHHhhhcCCcEEEcCCCcccch
Q 023842           54 APIKICGDVHGQ--FSDLLRLFEYGGYPPEANYLF-LGDYVDRGKQSIETICLLLAYKVKYKENFFLLRGNHECAS  126 (276)
Q Consensus        54 ~~i~viGDIHG~--~~~l~~il~~~~~~~~~~~vf-LGD~VDrG~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~~  126 (276)
                      ||+.++|||=|.  ...+...+.++.... +.+|+ -||....-..+.+....|..+..    .+. -.||||.-.
T Consensus         1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~~-T~GNHefD~   70 (252)
T 2z06_A            1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLDRRSYRLLREAGV----DLV-SLGNHAWDH   70 (252)
T ss_dssp             CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCHHHHHHHHHHTC----CEE-ECCTTTTSC
T ss_pred             CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCHHHHHHHHhCCC----CEE-EeccEeeEC
Confidence            689999999665  556667776654433 44444 47776655567788888877642    555 449999754


No 49 
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=91.54  E-value=0.17  Score=44.21  Aligned_cols=66  Identities=18%  Similarity=0.059  Sum_probs=43.0

Q ss_pred             CceeEEeCCCCCH--HHHHHHHHhCCCCCCcceeeecCcccCC-CCcHHHHHHHHHHhhhcCCcEEEcCCCcccc
Q 023842           54 APIKICGDVHGQF--SDLLRLFEYGGYPPEANYLFLGDYVDRG-KQSIETICLLLAYKVKYKENFFLLRGNHECA  125 (276)
Q Consensus        54 ~~i~viGDIHG~~--~~l~~il~~~~~~~~~~~vfLGD~VDrG-~~s~evl~~l~~lk~~~p~~v~~lrGNHE~~  125 (276)
                      ||+.++|||=|..  ..+...+.+..... +.+++.|+-.--| +-+......|..+..    .+..+ ||||.-
T Consensus         1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da~Tl-GNHefD   69 (255)
T 1t70_A            1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHRDAARGALEAGA----GCLTL-GNHAWH   69 (255)
T ss_dssp             CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCHHHHHHHHHHTC----SEEEC-CTTTTS
T ss_pred             CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCHHHHHHHHhCCC----CEEEe-cccccc
Confidence            6899999997764  55666666554333 5555554444334 567777777777642    55555 999986


No 50 
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=90.50  E-value=0.098  Score=47.54  Aligned_cols=43  Identities=16%  Similarity=0.229  Sum_probs=26.7

Q ss_pred             cCceeEEeCCCCCH----------------HHHHHHHHhCCCC-CCcceeeecCcccCCC
Q 023842           53 EAPIKICGDVHGQF----------------SDLLRLFEYGGYP-PEANYLFLGDYVDRGK   95 (276)
Q Consensus        53 ~~~i~viGDIHG~~----------------~~l~~il~~~~~~-~~~~~vfLGD~VDrG~   95 (276)
                      .-+|+-++|+||++                ..+..++++.... ++.-++..||.+...+
T Consensus        11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~   70 (341)
T 3gve_A           11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNP   70 (341)
T ss_dssp             EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSH
T ss_pred             EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcH
Confidence            45789999999985                3444555443222 2333455899997554


No 51 
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=89.74  E-value=0.12  Score=50.24  Aligned_cols=69  Identities=16%  Similarity=0.169  Sum_probs=39.1

Q ss_pred             cCceeEEeCCCCCH----------------HHHHHHHHhCC--CCCCcceeeecCcccCCCC-------cHHHHHHHHHH
Q 023842           53 EAPIKICGDVHGQF----------------SDLLRLFEYGG--YPPEANYLFLGDYVDRGKQ-------SIETICLLLAY  107 (276)
Q Consensus        53 ~~~i~viGDIHG~~----------------~~l~~il~~~~--~~~~~~~vfLGD~VDrG~~-------s~evl~~l~~l  107 (276)
                      ..+|+.++|+||++                ..+...+++..  ..++.-+|..||+++..+.       ...++..|-.+
T Consensus        15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln~l   94 (557)
T 3c9f_A           15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFIKQ   94 (557)
T ss_dssp             SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHTTS
T ss_pred             EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHHhc
Confidence            46799999999974                33334444311  1222235668999975431       22334444333


Q ss_pred             hhhcCCcEEEcCCCcccch
Q 023842          108 KVKYKENFFLLRGNHECAS  126 (276)
Q Consensus       108 k~~~p~~v~~lrGNHE~~~  126 (276)
                      .    -. ++..||||.-.
T Consensus        95 g----~D-a~tlGNHEfD~  108 (557)
T 3c9f_A           95 D----YD-LLTIGNHELYL  108 (557)
T ss_dssp             C----CS-EECCCGGGSSS
T ss_pred             C----CC-EEeecchhccc
Confidence            2    13 45679999854


No 52 
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=89.19  E-value=0.12  Score=46.89  Aligned_cols=43  Identities=16%  Similarity=0.156  Sum_probs=26.3

Q ss_pred             cCceeEEeCCCCCHH----------------HHHHHHHhCCCC-CCcceeeecCcccCCC
Q 023842           53 EAPIKICGDVHGQFS----------------DLLRLFEYGGYP-PEANYLFLGDYVDRGK   95 (276)
Q Consensus        53 ~~~i~viGDIHG~~~----------------~l~~il~~~~~~-~~~~~vfLGD~VDrG~   95 (276)
                      .-+|+-.+|+||++.                .+..++++.... ++.-++..||.+...+
T Consensus         8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~   67 (339)
T 3jyf_A            8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSP   67 (339)
T ss_dssp             EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSH
T ss_pred             eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCch
Confidence            457889999999863                344455443222 2334455899997443


No 53 
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=83.62  E-value=0.8  Score=43.72  Aligned_cols=66  Identities=23%  Similarity=0.234  Sum_probs=39.1

Q ss_pred             ceeEEeCCCCCH--------------------HHHHHHHHhCCC-CCCcceeeecCcccCCCC-----cHHHHHHHHHHh
Q 023842           55 PIKICGDVHGQF--------------------SDLLRLFEYGGY-PPEANYLFLGDYVDRGKQ-----SIETICLLLAYK  108 (276)
Q Consensus        55 ~i~viGDIHG~~--------------------~~l~~il~~~~~-~~~~~~vfLGD~VDrG~~-----s~evl~~l~~lk  108 (276)
                      +|+-+.|+||++                    ..+..++++... .++.-+|..||.+...+.     ...++++|-.+.
T Consensus         5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~lg   84 (530)
T 4h1s_A            5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNALR   84 (530)
T ss_dssp             EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHHTT
T ss_pred             EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhccC
Confidence            577789999865                    344444444322 223345558999986542     234555555543


Q ss_pred             hhcCCcEEEcCCCcccc
Q 023842          109 VKYKENFFLLRGNHECA  125 (276)
Q Consensus       109 ~~~p~~v~~lrGNHE~~  125 (276)
                      .    . ....||||.-
T Consensus        85 y----D-a~~lGNHEFd   96 (530)
T 4h1s_A           85 Y----D-AMALGNHEFD   96 (530)
T ss_dssp             C----C-EEECCGGGGT
T ss_pred             C----C-EEEEchhhhc
Confidence            1    2 5678999974


No 54 
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=80.10  E-value=0.93  Score=43.84  Aligned_cols=37  Identities=16%  Similarity=-0.007  Sum_probs=23.7

Q ss_pred             cceeeecCcccCCCCc-----HHHHHHHHHHhhhcCCcEEEcCCCccc
Q 023842           82 ANYLFLGDYVDRGKQS-----IETICLLLAYKVKYKENFFLLRGNHEC  124 (276)
Q Consensus        82 ~~~vfLGD~VDrG~~s-----~evl~~l~~lk~~~p~~v~~lrGNHE~  124 (276)
                      .-++..||++++.+.+     ..++++|-.+.  +  .+ +. ||||.
T Consensus       125 ~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~--d~-~~-GNHEf  166 (562)
T 2wdc_A          125 ALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--V--DH-MV-SHWEW  166 (562)
T ss_dssp             EEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--C--CE-EC-CSGGG
T ss_pred             EEEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--C--cE-Ee-cchhc
Confidence            3566689999976532     34556555553  2  34 46 99996


No 55 
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=73.39  E-value=4.8  Score=38.43  Aligned_cols=34  Identities=15%  Similarity=0.292  Sum_probs=25.6

Q ss_pred             CceeEEeCCC---CCHHHHHHHHHhCCCCCCcceeeecCcc
Q 023842           54 APIKICGDVH---GQFSDLLRLFEYGGYPPEANYLFLGDYV   91 (276)
Q Consensus        54 ~~i~viGDIH---G~~~~l~~il~~~~~~~~~~~vfLGD~V   91 (276)
                      .++.++||.+   |.+..+..+.+    .+.+-+|++||+|
T Consensus       117 ~rfa~~sc~~~~~g~~~~~~~ia~----~~~D~vlhlGD~i  153 (527)
T 2yeq_A          117 MTFAFASCQQYEHGYYTAYKHMAK----EKLDLVFHLGDYI  153 (527)
T ss_dssp             EEEEEECCCCGGGCCCHHHHHHTT----SCCSEEEECSCSS
T ss_pred             eEEEEEecCCCCCCccHHHHHHHh----cCCCEEEecCCcc
Confidence            4689999987   55666666543    3557899999999


No 56 
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=64.16  E-value=17  Score=34.35  Aligned_cols=74  Identities=9%  Similarity=0.165  Sum_probs=40.6

Q ss_pred             cCceeEEeCCC--CC----HHHHHHHHHh-CCCC----------CCcceeeecCcccCCCC-------------------
Q 023842           53 EAPIKICGDVH--GQ----FSDLLRLFEY-GGYP----------PEANYLFLGDYVDRGKQ-------------------   96 (276)
Q Consensus        53 ~~~i~viGDIH--G~----~~~l~~il~~-~~~~----------~~~~~vfLGD~VDrG~~-------------------   96 (276)
                      +..+++|||||  +.    ...+..+.+- .|.-          .-.++|+.||.|+.-.+                   
T Consensus       200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~  279 (476)
T 3e0j_A          200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAAS  279 (476)
T ss_dssp             CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHH
T ss_pred             CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhh
Confidence            35699999999  22    2233333332 1221          12578899999986322                   


Q ss_pred             --cHHHHHHHHHHhhhcCCcEEEcCCCcccchh
Q 023842           97 --SIETICLLLAYKVKYKENFFLLRGNHECASI  127 (276)
Q Consensus        97 --s~evl~~l~~lk~~~p~~v~~lrGNHE~~~~  127 (276)
                        +++.++.+++- +...-.|.+++||||....
T Consensus       280 ~~~~~~ld~~L~~-l~~~i~V~lmPG~~DP~~~  311 (476)
T 3e0j_A          280 VEAVKMLDEILLQ-LSASVPVDVMPGEFDPTNY  311 (476)
T ss_dssp             HHHHHHHHHHHHH-HHTTSCEEEECCTTSSSCS
T ss_pred             HHHHHHHHHHHHh-cccCceEEecCCCCCcccc
Confidence              22333333322 1122268999999998644


No 57 
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=44.56  E-value=27  Score=32.81  Aligned_cols=61  Identities=11%  Similarity=0.140  Sum_probs=40.1

Q ss_pred             CHHHHHHHHHhCCCC-CCcceeeecCcccCCCC------------------c-HHHHHHHHH--Hhhh-cCCcEEEcCCC
Q 023842           65 QFSDLLRLFEYGGYP-PEANYLFLGDYVDRGKQ------------------S-IETICLLLA--YKVK-YKENFFLLRGN  121 (276)
Q Consensus        65 ~~~~l~~il~~~~~~-~~~~~vfLGD~VDrG~~------------------s-~evl~~l~~--lk~~-~p~~v~~lrGN  121 (276)
                      +|+.|..+++.+.-. ..+.+|++|.+||.-..                  + -+++..++.  ++.. ..-+|+++.|+
T Consensus       164 ~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~  243 (460)
T 3flo_A          164 SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFTPILKTISPHIQTVLIPST  243 (460)
T ss_dssp             CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCT
T ss_pred             ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHHHHHHhccCCCEEEEeCCc
Confidence            478899999987764 56788999999997531                  1 123333321  1111 12368999999


Q ss_pred             cccc
Q 023842          122 HECA  125 (276)
Q Consensus       122 HE~~  125 (276)
                      ||..
T Consensus       244 rD~~  247 (460)
T 3flo_A          244 KDAI  247 (460)
T ss_dssp             TBTT
T ss_pred             cccc
Confidence            9985


No 58 
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=35.06  E-value=26  Score=32.47  Aligned_cols=72  Identities=22%  Similarity=0.309  Sum_probs=40.3

Q ss_pred             CChhHHHHHHHHHHhccCCCCCccccCCHHHHHHHHHHHHHHHhhCCCceeec-CceeEEeC-CC-CCHHHHHHHHHhCC
Q 023842            1 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLELE-APIKICGD-VH-GQFSDLLRLFEYGG   77 (276)
Q Consensus         1 ~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~ep~~~~~~-~~i~viGD-IH-G~~~~l~~il~~~~   77 (276)
                      |+++.++++++|=..-.        ..+++++.++++       .+|..+... .|.   |+ +| |++-.+..+.....
T Consensus         1 ~~~~~~~~l~~Rg~~~~--------~~~~~~L~~~L~-------~~~~~iy~G~dPT---g~sLHlGh~v~l~~~~~lQ~   62 (420)
T 1jil_A            1 MTNVLIEDLKWRGLIYQ--------QTDEQGIEDLLN-------KEQVTLYCGADPT---ADSLHIGHLLPFLTLRRFQE   62 (420)
T ss_dssp             -CCHHHHHHHHTTCCCC--------BSCHHHHHHHHH-------HSCCEEEEEECCS---SSSCBHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHcCchhh--------cCCHHHHHHHHc-------CCCCEEEEeeCCC---CCCccHHHHHHHHHHHHHHH
Confidence            67776666665543322        345677777773       444333321 222   56 88 88887766543321


Q ss_pred             CCCCcceeeecCcc
Q 023842           78 YPPEANYLFLGDYV   91 (276)
Q Consensus        78 ~~~~~~~vfLGD~V   91 (276)
                       .+...++++||+-
T Consensus        63 -~G~~~~~lIgd~t   75 (420)
T 1jil_A           63 -HGHRPIVLIGGGT   75 (420)
T ss_dssp             -TTCEEEEEECTTG
T ss_pred             -CCCcEEEEEcCce
Confidence             1245678899975


No 59 
>1ymm_C MBP peptide, HLA class II histocompatibility antigen, DR beta; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens}
Probab=32.50  E-value=18  Score=19.79  Aligned_cols=19  Identities=32%  Similarity=0.464  Sum_probs=14.8

Q ss_pred             eccCCCCCCCCCCCCCCCC
Q 023842          257 VGFGNNMLRPGTPPHKGGK  275 (276)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~  275 (276)
                      |-|=.||..|-|||..+|+
T Consensus         5 VHFFKNivspr~pp~~q~~   23 (26)
T 1ymm_C            5 VHFFKNIVTPRGGSGGGGG   23 (26)
T ss_pred             hhhhhhccCCCCCCCCcCC
Confidence            3455789999999988776


No 60 
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=23.48  E-value=2.3e+02  Score=20.98  Aligned_cols=50  Identities=12%  Similarity=0.250  Sum_probs=32.8

Q ss_pred             CCcccCC---CCcEEec-CHHHHHHHHHHcCCCeEEEecccCCCCcccceeccCCCCC
Q 023842          211 EGWGEND---RGVSYTF-GADKVVEFLQKHDLDLICRAHQILKASEKKGKVGFGNNML  264 (276)
Q Consensus       211 ~~~~~~~---rg~~~~f-G~~~~~~fl~~~~l~~iirgHe~~~~~~~~~~~~~~~~~~  264 (276)
                      -+|+.+.   ....+.| ..+...+|++++|+.+.|.-  ...  .+...-.||+|..
T Consensus        50 MGWtsS~D~~~qv~L~F~skE~AiayAek~G~~y~V~e--p~~--~~~r~ksYadNF~  103 (108)
T 2lju_A           50 MNWTGSHDTKQQVCLSFTTRELAIAYAVAHKIDYTVLQ--DNP--RTIVPKSYADNFT  103 (108)
T ss_dssp             CCCSSSCCCCCCSCEEESSHHHHHHHHHHTTCEEEEEC--SSC--CCCCCCCCCCCCC
T ss_pred             ccccCCCCccccceEecCCHHHHHHHHHHcCCEEEEec--CCc--ccCCcCchHHHCC
Confidence            3455442   3335666 56778899999999999884  322  2234567888875


No 61 
>2lug_A Myelin basic protein; intrinsically disordered proteins, dodecylphosphocholine MIC myelin membrane, lipid binding protein; NMR {Mus musculus}
Probab=21.63  E-value=18  Score=21.02  Aligned_cols=18  Identities=50%  Similarity=0.911  Sum_probs=13.7

Q ss_pred             cCCCCCCCCCCCCCCCCC
Q 023842          259 FGNNMLRPGTPPHKGGKG  276 (276)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~  276 (276)
                      |=.|...|-|||..-+||
T Consensus        15 ffknivsprtppp~q~kg   32 (36)
T 2lug_A           15 FFKNIVTPRTPPPSQGKG   32 (36)
T ss_dssp             HHHHHHCSSCCCCCBCTT
T ss_pred             hhhhccCCCCCCCccccc
Confidence            445778899999887776


No 62 
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=20.19  E-value=42  Score=23.38  Aligned_cols=39  Identities=15%  Similarity=0.157  Sum_probs=10.2

Q ss_pred             CHHHHHHHHHHHHHHHhhCCCceeecCceeEEeCCCCCH
Q 023842           28 TEAEIRQLCAASKEIFLSQPNLLELEAPIKICGDVHGQF   66 (276)
Q Consensus        28 ~~~~~~~l~~~~~~~l~~ep~~~~~~~~i~viGDIHG~~   66 (276)
                      +++-+..|+++...+-........-+.+..+.+|+.+++
T Consensus        36 ~qeRLr~llekl~~~a~~R~~~~K~d~ry~~tsDvR~QL   74 (75)
T 1h3o_A           36 TQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQL   74 (75)
T ss_dssp             HHHHHHHHHHHHHC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcCCCCeEeeccHHhhc
Confidence            456677778887777777777777788999999999875


Done!