Query 023844
Match_columns 276
No_of_seqs 198 out of 1009
Neff 4.0
Searched_HMMs 46136
Date Fri Mar 29 07:03:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023844.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023844hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02707 Soluble inorganic pyr 100.0 5.2E-74 1.1E-78 527.7 20.3 202 39-240 15-224 (267)
2 KOG1626 Inorganic pyrophosphat 100.0 1.6E-68 3.5E-73 488.0 14.6 176 55-231 2-183 (279)
3 PRK00642 inorganic pyrophospha 100.0 3.5E-52 7.6E-57 371.0 14.6 157 77-239 5-173 (205)
4 PLN02373 soluble inorganic pyr 100.0 9.8E-49 2.1E-53 345.2 13.5 142 80-240 8-155 (188)
5 PRK01250 inorganic pyrophospha 100.0 2.7E-45 6E-50 320.4 13.0 142 83-243 2-152 (176)
6 cd00412 pyrophosphatase Inorga 100.0 1.2E-43 2.7E-48 304.5 11.7 133 94-245 1-138 (155)
7 PF00719 Pyrophosphatase: Inor 100.0 1E-43 2.2E-48 304.6 8.2 130 97-245 1-135 (156)
8 COG0221 Ppa Inorganic pyrophos 100.0 1.6E-42 3.4E-47 302.0 12.3 145 82-245 1-150 (171)
9 PRK02230 inorganic pyrophospha 100.0 2.2E-42 4.7E-47 304.2 12.2 132 94-244 3-139 (184)
10 KOG1626 Inorganic pyrophosphat 73.0 5.1 0.00011 38.3 4.3 133 81-230 38-185 (279)
11 PRK03760 hypothetical protein; 56.3 7.3 0.00016 32.4 1.7 44 71-115 63-109 (117)
12 PF07177 Neuralized: Neuralize 36.1 36 0.00078 25.8 2.6 21 169-189 30-50 (69)
13 PF02643 DUF192: Uncharacteriz 33.5 6.9 0.00015 31.7 -1.8 45 70-114 51-100 (108)
14 smart00588 NEUZ domain in neur 31.3 60 0.0013 27.1 3.4 44 164-214 26-72 (123)
15 PF14575 EphA2_TM: Ephrin type 27.6 16 0.00034 28.2 -0.6 10 145-154 56-65 (75)
16 cd09030 DUF1425 Putative perip 26.9 55 0.0012 25.8 2.4 31 62-92 45-79 (101)
17 COG1430 Uncharacterized conser 25.2 1.1E+02 0.0024 26.1 4.0 41 71-112 66-111 (126)
18 cd04657 Piwi_ago-like Piwi_ago 21.8 32 0.00069 33.9 0.1 17 256-272 173-189 (426)
19 cd02826 Piwi-like Piwi-like: P 21.0 34 0.00073 33.2 0.1 15 257-271 150-164 (393)
20 PF08437 Glyco_transf_8C: Glyc 20.8 48 0.001 24.4 0.9 12 80-91 12-23 (57)
21 PF04425 Bul1_N: Bul1 N termin 20.1 68 0.0015 32.7 2.1 45 133-185 216-263 (438)
No 1
>PLN02707 Soluble inorganic pyrophosphatase
Probab=100.00 E-value=5.2e-74 Score=527.72 Aligned_cols=202 Identities=75% Similarity=1.189 Sum_probs=194.1
Q ss_pred eecccccceecceeccceeEEEecCCCCcceEEEEEcCCCCcCCCCcCCCCCCCCCeeEEEEEeCCCCCceEEEecCCCC
Q 023844 39 AFPSKRLFSCRAIYNPQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELY 118 (276)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~G~~~t~~yrv~f~~~~g~~iSpwHDIPl~~~~~~vn~VVEIPrgS~aK~Ei~~~e~~ 118 (276)
...++|.++|.+++.+.|+++++|+++|++||+||++.+|+++|||||||++..+++|||||||||||++||||++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~G~~~t~~~r~~~~~~~g~~~spwHdIpl~~~~~~vn~VVEIPrgs~~KyEidk~~~~ 94 (267)
T PLN02707 15 PPVSRRLFSCASAVNAAYAVEEEGEAETLDYRVFFSDGSGKKVSPWHDIPLHAGDGTFNFVVEIPKETSAKMEVATDEPF 94 (267)
T ss_pred ccccccceeehhhhccceeEEeecCCCCcceEEEEECCCCCccCchhcCCCCCCCCEEEEEEEECCCCceeEEECccCCC
Confidence 33578999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCC
Q 023844 119 TPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEG 198 (276)
Q Consensus 119 npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeG 198 (276)
|||+||+++|++|+||++|||||||||||||||++.+++++|+.||||||||||||+.++.+|+|++|||||+|+|||+|
T Consensus 95 npi~qD~~~g~lr~yP~~~~~NYGfIPqTwedp~~~~~~~~~l~gDgDPLDVlvi~~~~~~pG~Vv~vR~IGvL~miDeG 174 (267)
T PLN02707 95 TPIKQDTKKGKLRDYPYNINWNYGLLPQTWEDPTHANPEVEGAFGDNDPVDVVEIGERAAKIGEVLKVKPLGVLAMIDEG 174 (267)
T ss_pred CCEEEeeecCceEECCCcCccccccccccccCcccccccccccCCCCCccEEEEecCCCcCCccEEEEEEeEEEEEEeCC
Confidence 99999999999999999999999999999999999999977799999999999999999999999999999999999999
Q ss_pred CCceEEEEEeCCCCcCCCCCCcccccccCCChh--------hHHhhhccc
Q 023844 199 ELDWKIVAISLDDPKAALVNDVDDVEKHFPVSN--------ILKESQKKV 240 (276)
Q Consensus 199 E~DwKIIaV~~~DP~~~~IndI~DVek~~pg~~--------~l~~~~~~~ 240 (276)
|+|||||||+++||++++||||+||++++||+. .||..++|.
T Consensus 175 E~D~KIIaV~~~Dp~~~~i~di~Dv~~~~pg~l~~I~~fF~~YK~~eGK~ 224 (267)
T PLN02707 175 ELDWKVVAISADDPKASLVNDVDDVEKHFPGTLTAIRDWFRDYKIPDGKP 224 (267)
T ss_pred CCCCEEEEEECCCCcccccCChhHhhhhhhhHHHHHHHHHHHhcCCCCCc
Confidence 999999999999999999999999999999885 788888665
No 2
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion]
Probab=100.00 E-value=1.6e-68 Score=487.95 Aligned_cols=176 Identities=52% Similarity=0.890 Sum_probs=171.8
Q ss_pred ceeEEEecCCCCcceEEEEEcCCCCcCCCCcCCCCCCC-CCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEE-
Q 023844 55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG-DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY- 132 (276)
Q Consensus 55 ~~~~~~~G~~~t~~yrv~f~~~~g~~iSpwHDIPl~~~-~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~- 132 (276)
.|+++++|+++|++||+||...+|+++||||||||++. ...+|||||||||+++||||++++++|||+||.|+|++||
T Consensus 2 ~~~t~e~g~~~s~~~rvy~~~~~~~~iS~fhdipl~a~~~~~~nmvvEiPrwtnak~EIs~k~~~~pikqD~KkGklR~v 81 (279)
T KOG1626|consen 2 QYETVETGKKYSLDYRVYFPKLNGRIISPFHDIPLAAHPWHDLNMVVEIPRWTNAKMEISKKEPFNPIKQDKKKGKLRFV 81 (279)
T ss_pred cceeeeccccCCccceeeecCCCCccccccccCccccCccccEeecccccceeeeEEEEeccCCCCcceeeccCCceEEE
Confidence 68999999999999999999999999999999999987 6899999999999999999999999999999999999999
Q ss_pred ---ecCc-ccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEe
Q 023844 133 ---YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAIS 208 (276)
Q Consensus 133 ---yP~~-~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~ 208 (276)
|||. |+|||||||||||||+|.+++ |||.||||||||||||+++..+|++++||+||+|+||||||+|||||||+
T Consensus 82 ~n~fp~~gYiwNYGalPqTwedP~~~~~~-t~~~gDnDPiDV~eIg~~~~~~G~vl~vKvLG~malIDeGE~DwKiIAId 160 (279)
T KOG1626|consen 82 RNLFPYKGYIWNYGALPQTWEDPNHVDPE-TKAKGDNDPIDVLEIGQEPVLPGCVLQVKVLGLMALIDEGETDWKIIAID 160 (279)
T ss_pred EecccccccccccccCcccccCCCccccc-ccccCCCCcceeeEecccccccccEEEEEeeeeeecccCCCccceEEEEE
Confidence 9995 999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCcccccccCCChh
Q 023844 209 LDDPKAALVNDVDDVEKHFPVSN 231 (276)
Q Consensus 209 ~~DP~~~~IndI~DVek~~pg~~ 231 (276)
++||+++++|||+||++++||+.
T Consensus 161 vnDP~A~~~ndi~DV~~~~Pg~L 183 (279)
T KOG1626|consen 161 VNDPLASEYNDIEDVEKLFPGLL 183 (279)
T ss_pred CCCcchhhhccHHHHHHhCcchH
Confidence 99999999999999999999994
No 3
>PRK00642 inorganic pyrophosphatase; Provisional
Probab=100.00 E-value=3.5e-52 Score=371.03 Aligned_cols=157 Identities=25% Similarity=0.373 Sum_probs=135.9
Q ss_pred CCCcCCCCcCCCCCCC-CCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCC
Q 023844 77 SGKKVSPWHDIPLQLG-DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFAN 155 (276)
Q Consensus 77 ~g~~iSpwHDIPl~~~-~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~ 155 (276)
++..+|||||||++++ ++.|||||||||||++|||++++++. ++.|+ +++++..||||||||||||+||.+.+
T Consensus 5 ~~~~~spwhdi~~~~~~~~~vn~VIEIP~gs~~KyE~dk~~g~--~~ldr----~l~~~~~yP~nYGfIPqT~~dp~~~~ 78 (205)
T PRK00642 5 PLSRAHPWHGLSLGPDAPESVCCYIEITPFDTVKYELDKATGY--LKVDR----PQKFSNFCPALYGFIPRTYCGDLSGK 78 (205)
T ss_pred cccccCccccCCCCCCCCCEEEEEEEECCCCCeeEEEecCCCc--eEEee----ecccCCcCCcccCcCcccccCccccc
Confidence 4557899999999865 68999999999999999999998765 44454 45666667789999999999999887
Q ss_pred cc-----ccCCCCCCCcceEEEEcCcccCCccE-EEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCC
Q 023844 156 SE-----VEGAFGDNDPVDVVEIGERRRKIGEI-LRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPV 229 (276)
Q Consensus 156 ~~-----~~g~~GDgDPLDVlvIg~~~~~~G~V-v~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg 229 (276)
.+ .+++.|||||||||||++.++.+|++ ++|||||+|+|+|+||+|||||||+++||++++|||++||+++...
T Consensus 79 ~~~~~~~~~~~~gDgDPLDvlvl~~~~~~~G~v~i~~R~iG~l~miD~ge~D~KIiaV~~~Dp~~~~i~dl~Dl~~~~l~ 158 (205)
T PRK00642 79 LSGEQSGREDIKGDGDPLDICVLTEKNITHGNILLQARPIGGLRMIDGGEADDKIIAVLEDDLVYGEIKDISECPGTLLD 158 (205)
T ss_pred ccccccccccCCCCCCceEEEEecCCCcCCCceEEEEEEeEEEEEecCCCccceEEEEECCCCccccCCChHHCCHHHHH
Confidence 54 35778999999999999999999996 7999999999999999999999999999999999999999986532
Q ss_pred h-----hhHHhhhcc
Q 023844 230 S-----NILKESQKK 239 (276)
Q Consensus 230 ~-----~~l~~~~~~ 239 (276)
- ..||.+++|
T Consensus 159 ~I~~fF~~YK~legk 173 (205)
T PRK00642 159 RLQHYFLTYKATPGE 173 (205)
T ss_pred HHHHHHHHHcCcccC
Confidence 2 378888753
No 4
>PLN02373 soluble inorganic pyrophosphatase
Probab=100.00 E-value=9.8e-49 Score=345.19 Aligned_cols=142 Identities=33% Similarity=0.485 Sum_probs=126.2
Q ss_pred cCCCCcCCCCCC-CCCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccc
Q 023844 80 KVSPWHDIPLQL-GDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEV 158 (276)
Q Consensus 80 ~iSpwHDIPl~~-~~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~ 158 (276)
.+|||||||+++ .++.+||||||||||++|||++++++ .|+||+.... +..||||||||||||+
T Consensus 8 ~~~~whdi~~~~~~~~~v~vVIEIP~gs~~KyE~dk~~g--~i~~Dr~l~~----~~~yP~nYGfIP~T~~--------- 72 (188)
T PLN02373 8 AAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTG--LIKVDRVLYS----SVVYPHNYGFIPRTLC--------- 72 (188)
T ss_pred cCCccccCCCCCCCCCEEEEEEEECCCCCeeEEEccCCC--CEEEeeeccc----CCcCCccccccccccc---------
Confidence 589999999985 46899999999999999999998864 6999976443 4445669999999998
Q ss_pred cCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCCh-----hhH
Q 023844 159 EGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVS-----NIL 233 (276)
Q Consensus 159 ~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~-----~~l 233 (276)
|||||||||||++.++.+|++++|||||+|+|+|+||+|||||||+++||.+++|+|++||++++-.. ..|
T Consensus 73 ----~DgDPLDvlvl~~~~~~~G~vi~~R~iG~l~m~D~ge~D~KiIaV~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~Y 148 (188)
T PLN02373 73 ----EDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDY 148 (188)
T ss_pred ----CCCCccEEEEecCCCCCCceEEEEEEEEEEEEeeCCCCCCeEEEEECCCcccccCCChHHCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999998765322 378
Q ss_pred Hhhhccc
Q 023844 234 KESQKKV 240 (276)
Q Consensus 234 ~~~~~~~ 240 (276)
|++++|.
T Consensus 149 K~legK~ 155 (188)
T PLN02373 149 KKNENKE 155 (188)
T ss_pred cccCCCe
Confidence 8888654
No 5
>PRK01250 inorganic pyrophosphatase; Provisional
Probab=100.00 E-value=2.7e-45 Score=320.38 Aligned_cols=142 Identities=29% Similarity=0.405 Sum_probs=123.1
Q ss_pred CCcCCCCC-CCCCeeEEEEEeCCCCC-ceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccC
Q 023844 83 PWHDIPLQ-LGDGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (276)
Q Consensus 83 pwHDIPl~-~~~~~vn~VVEIPrgS~-aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g 160 (276)
.||++|.+ ..++.|||||||||||+ +|||+++++ +.+++|+......+ ||||||||||||+
T Consensus 2 ~~~~l~~~~~~~~~v~vvvEIPkgs~~~KyE~d~~~--g~~~~dR~l~~~~~----yP~nYGfIP~T~~----------- 64 (176)
T PRK01250 2 SLNKIPAGKDLPEDINVIIEIPANSDPIKYEVDKES--GALFVDRFLYTAMF----YPCNYGFIPHTLS----------- 64 (176)
T ss_pred ChhhCCCCCCCCCEEEEEEEeCCCCCceeEEEecCC--CCEEEeeccCCCCc----CCcCcccCCCccc-----------
Confidence 68999998 45799999999999999 899999875 47899976544344 4569999999998
Q ss_pred CCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCCh-----hhH
Q 023844 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPVS-----NIL 233 (276)
Q Consensus 161 ~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg~-----~~l 233 (276)
|||||||||||++.++.+|++++|||||+|+|+|+||.|||||||+++ ||++++|+|++||++++... ..|
T Consensus 65 --~DgDPLDvlvl~~~~~~~G~vv~~r~iG~l~m~D~ge~D~KiiaV~~~~~dp~~~~i~dl~dl~~~~l~eI~~fF~~Y 142 (176)
T PRK01250 65 --LDGDPVDVLVVTPYPLVPGSVIRCRPVGVLKMEDESGEDAKIIAVPHDKLSPEYDHIKDVNDLPELLKAQIKHFFEHY 142 (176)
T ss_pred --CCCCceEEEEecCCCCCCceEEEEEEEEEEEeecCCCCCCeEEEEECCCCCccccccCChHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998 79999999999999866432 377
Q ss_pred HhhhccceeE
Q 023844 234 KESQKKVIMK 243 (276)
Q Consensus 234 ~~~~~~~~~~ 243 (276)
|.++.++.++
T Consensus 143 K~le~gk~~~ 152 (176)
T PRK01250 143 KDLEKGKWVK 152 (176)
T ss_pred cCCCCCCCEE
Confidence 8887444444
No 6
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=100.00 E-value=1.2e-43 Score=304.54 Aligned_cols=133 Identities=44% Similarity=0.718 Sum_probs=117.5
Q ss_pred CeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEE
Q 023844 94 GVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEI 173 (276)
Q Consensus 94 ~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvI 173 (276)
+.+||||||||||++|||+++++ ++|+||+.... +..||||||||||||+ +||||||||||
T Consensus 1 ~~v~vvIEIP~gs~~KyE~d~~~--g~i~~DR~l~~----~~~yP~nYGfiP~T~~-------------~DgDPlDvlvl 61 (155)
T cd00412 1 EVVNVVIEIPKGSNAKYEIDKET--GPIKVDRFLYS----SMGYPWNYGFIPQTLE-------------DDGDPLDVLVI 61 (155)
T ss_pred CEEEEEEEECCCCceeEEEccCC--Cceeecccccc----CCcCcccccccCCccc-------------CCCCceEEEEE
Confidence 36899999999999999999876 89999965443 3456669999999999 89999999999
Q ss_pred cCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCCh-----hhHHhhhccceeEEE
Q 023844 174 GERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVS-----NILKESQKKVIMKMI 245 (276)
Q Consensus 174 g~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~-----~~l~~~~~~~~~~~~ 245 (276)
|+.++.+|++++|||||+|.|+|+||.|||||||+.+||++++|||++||++++..- ..||.+++++.+++.
T Consensus 62 ~~~~~~~G~~~~~r~iG~l~m~D~ge~D~KiiaV~~~dp~~~~i~~l~Dl~~~~l~~I~~fF~~YK~le~~k~~~~~ 138 (155)
T cd00412 62 GEEPLFPGSVIRVRPLGVLKMIDEGETDWKVIAVPVDDPRYSHINDISDVPPHLLDEIKHFFEHYKDLEGKKEVKVA 138 (155)
T ss_pred cCCCCCCeeEEEEEEEEEEEeccCCCccceEEEeeCCCcccccCCChHHCCHHHHHHHHHHHHHhcccCCCCceEEC
Confidence 999999999999999999999999999999999999999999999999999655322 478999987776643
No 7
>PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3.6.1.1 from EC) (PPase) [, ] is the enzyme responsible for the hydrolysis of pyrophosphate (PPi) which is formed principally as the product of the many biosynthetic reactions that utilise ATP. All known PPases require the presence of divalent metal cations, with magnesium conferring the highest activity. Among other residues, a lysine has been postulated to be part of or close to the active site. PPases have been sequenced from bacteria such as Escherichia coli (homohexamer), Bacillus PS3 (Thermophilic bacterium PS-3) and Thermus thermophilus, from the archaebacteria Thermoplasma acidophilum, from fungi (homodimer), from a plant, and from bovine retina. In yeast, a mitochondrial isoform of PPase has been characterised which seems to be involved in energy production and whose activity is stimulated by uncouplers of ATP synthesis. The sequences of PPases share some regions of similarities, among which is a region that contains three conserved aspartates that are involved in the binding of cations.; GO: 0000287 magnesium ion binding, 0004427 inorganic diphosphatase activity, 0006796 phosphate-containing compound metabolic process, 0005737 cytoplasm; PDB: 2UXS_A 1WCF_A 1SXV_A 3I4Q_A 2PRD_A 2IHP_B 1PYP_A 2IK7_A 2IK4_A 1E9G_A ....
Probab=100.00 E-value=1e-43 Score=304.59 Aligned_cols=130 Identities=35% Similarity=0.584 Sum_probs=109.3
Q ss_pred EEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCc
Q 023844 97 NFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGER 176 (276)
Q Consensus 97 n~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~ 176 (276)
||||||||||++|||+++++++++|.| +++++..||+|||||||||+ ||||||||+|||+.
T Consensus 1 n~viEIP~gs~~KyE~d~~~~~~~idr------~~~~~~~yP~NYGfIP~T~~-------------~DGDPLDvlvl~~~ 61 (156)
T PF00719_consen 1 NVVIEIPKGSRAKYEYDKETGLNPIDR------PLYSSMPYPFNYGFIPQTLG-------------GDGDPLDVLVLGSE 61 (156)
T ss_dssp EEEEEE-TTSSEEEEEETTTTEEEEEE------E-SSSBS-SSEEEEETTEEB-------------TTSSCEEEEEESSS
T ss_pred CEEEEECCCCCeeEEECCCCCCcccee------ccccCcCCccccccccceec-------------CCCCeeeEEEEecc
Confidence 899999999999999999999888877 67778888899999999999 99999999999999
Q ss_pred ccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCCh-----hhHHhhhccceeEEE
Q 023844 177 RRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVS-----NILKESQKKVIMKMI 245 (276)
Q Consensus 177 ~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~-----~~l~~~~~~~~~~~~ 245 (276)
++.+|++++|||||+|.|+|+||+|||||||+.+||++++|+|++|++++.... ..||.++...+++..
T Consensus 62 ~~~~G~v~~~r~iG~l~m~D~ge~D~KiiaV~~~dp~~~~i~dl~dl~~~~~~~i~~fF~~YK~l~~~k~~~~~ 135 (156)
T PF00719_consen 62 PLPPGSVVRVRVIGVLKMIDDGERDDKIIAVPVDDPRYDDIKDLEDLPPHLLDEIEHFFRNYKDLEENKWVEVG 135 (156)
T ss_dssp ---TTEEEEEEEEEEEEEEETTEEEEEEEEEETTCGGGTTHHSGGGSSHHHHHHHHHHHHHTTTTSTTEEEEEE
T ss_pred cccceeEEEEeceEEEEEeeCCCCceEEEEeccCCcccCCcCcHHHhChhHHHHHHHHHHHhcCcCCCCeEEeC
Confidence 999999999999999999999999999999999999999888888887765432 367777444454443
No 8
>COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion]
Probab=100.00 E-value=1.6e-42 Score=301.98 Aligned_cols=145 Identities=33% Similarity=0.501 Sum_probs=132.7
Q ss_pred CCCcCCCCCCCCCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCC
Q 023844 82 SPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGA 161 (276)
Q Consensus 82 SpwHDIPl~~~~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~ 161 (276)
++||+||+..+...+||+||||+||++|||++++.+..++.|+.+++ +.||+|||||||||+
T Consensus 1 ~~~~~~~~~~~~~~i~vviEIP~~s~~KyE~dk~~~~~~vdR~l~~~------~~YP~NYGfiP~Tl~------------ 62 (171)
T COG0221 1 MDLHKIPAGPDDEDINVVIEIPKGSNIKYEVDKETGRLLVDRPLKTP------MGYPVNYGFIPNTLS------------ 62 (171)
T ss_pred CCccccCCCCCcceEEEEEeccCCCccceEEeeecCceeeeecCCCC------CcCCccccccCCccc------------
Confidence 68999999876679999999999999999999999888887776654 445569999999999
Q ss_pred CCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCChh-----hHHhh
Q 023844 162 FGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVSN-----ILKES 236 (276)
Q Consensus 162 ~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~~-----~l~~~ 236 (276)
+|||||||||+++.++.+|++++|||||+|+|+|+||.|||||||+..||++++|+|++|++++++... .|+.+
T Consensus 63 -~DGDPlDvlVi~~~p~~pG~vi~~r~iG~l~m~D~~e~D~Kviav~~~dp~~~~i~di~d~~~~~~~~i~~ffe~yK~l 141 (171)
T COG0221 63 -DDGDPLDVLVIGEEPLAPGCVIQARPIGVLKMIDEGEKDDKVIAVPKLDPRYEHIKDISDLPEHLLDEIQHFFETYKDL 141 (171)
T ss_pred -CCCCceEEEEEcCcCCCceeEEEEEEEEEEEEeeCCCcceEEEEecCCCcchhhccchhHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999999999999999999999998764 88999
Q ss_pred hccceeEEE
Q 023844 237 QKKVIMKMI 245 (276)
Q Consensus 237 ~~~~~~~~~ 245 (276)
|+.+++|+.
T Consensus 142 e~~k~~~~~ 150 (171)
T COG0221 142 EKGKWVKVE 150 (171)
T ss_pred CCCcEEEec
Confidence 998887763
No 9
>PRK02230 inorganic pyrophosphatase; Provisional
Probab=100.00 E-value=2.2e-42 Score=304.17 Aligned_cols=132 Identities=27% Similarity=0.376 Sum_probs=118.2
Q ss_pred CeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEE
Q 023844 94 GVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEI 173 (276)
Q Consensus 94 ~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvI 173 (276)
+.+||||||||||++|||++++ .+.|++|+...... .||||||||||||+ |||||||||||
T Consensus 3 ~~vnvvIEIP~gs~~KyE~d~~--~g~i~~DR~l~~~~----~YP~NYGfIP~Tl~-------------~DGDPLDvlvl 63 (184)
T PRK02230 3 KIIEVTIEIPKGSNIKYEYDRK--TNKIVVDRILRGDF----VYPANYGFIKEALD-------------WDGDELDVLVY 63 (184)
T ss_pred cEEEEEEEECCCCCeeEEEecC--CCCEEEEeecCCCC----CCCcCcccCCCccC-------------CCCCceEEEEE
Confidence 5799999999999999999876 56899998754333 45569999999998 99999999999
Q ss_pred cCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCCh-----hhHHhhhccceeEE
Q 023844 174 GERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVS-----NILKESQKKVIMKM 244 (276)
Q Consensus 174 g~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~-----~~l~~~~~~~~~~~ 244 (276)
|+.++.||++++|||||+|+|+|+||.|||||||+.+||.+++|||++||++++..- ..||.+++|.++++
T Consensus 64 ~~~~~~pG~vi~~r~IGvl~m~D~ge~D~KIIaV~~~dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~legk~~~~v 139 (184)
T PRK02230 64 SDQKFLPGTVLNARIIGAMKMIDDGETDTKLIAVHDDDYRLDHINSLKDLPQHWLDEIEYFFSNYKNWKRKGITKV 139 (184)
T ss_pred CCCCCCCccEEEEEEEEEEEeccCCCcCcEEEEEECCCCChhhcCChHHCCHHHHHHHHHHHHHhcCCCCCCeEEe
Confidence 999999999999999999999999999999999999999999999999999886432 48899999988774
No 10
>KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion]
Probab=73.01 E-value=5.1 Score=38.32 Aligned_cols=133 Identities=17% Similarity=0.142 Sum_probs=80.8
Q ss_pred CCCCcCCCCCCC-CCeeEEEEEeC-CCCCceEEEecCCCCCceeeeeeCCeeEEecCcc---cccCC----CCccccCCC
Q 023844 81 VSPWHDIPLQLG-DGVFNFVVEIP-KESSAKMEVATDELYTPIKQDIKKGKLRYYPYNI---NWNYG----LFPQTWEDP 151 (276)
Q Consensus 81 iSpwHDIPl~~~-~~~vn~VVEIP-rgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~---p~NYG----fIPqTwedP 151 (276)
.++||++-.... +...|+++||- +++..+++.+++.+ -++.++..-...-|+++| |--+- .-|.|-++-
T Consensus 38 a~~~~~~nmvvEiPrwtnak~EIs~k~~~~pikqD~KkG--klR~v~n~fp~~gYiwNYGalPqTwedP~~~~~~t~~~g 115 (279)
T KOG1626|consen 38 AHPWHDLNMVVEIPRWTNAKMEISKKEPFNPIKQDKKKG--KLRFVRNLFPYKGYIWNYGALPQTWEDPNHVDPETKAKG 115 (279)
T ss_pred cCccccEeecccccceeeeEEEEeccCCCCcceeeccCC--ceEEEEecccccccccccccCcccccCCCcccccccccC
Confidence 458999877654 68899999999 99999999998875 577777654444355432 21111 234454421
Q ss_pred CCCCcc---ccC--CCCCCCcceEEEEcCccc-CCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccc
Q 023844 152 SFANSE---VEG--AFGDNDPVDVVEIGERRR-KIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEK 225 (276)
Q Consensus 152 ~~~~~~---~~g--~~GDgDPLDVlvIg~~~~-~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek 225 (276)
-.||- .-| ...=|+=|-|=+||.-++ -.|+. .=|+|. ||-. +..-+.+.+|+|++.+..
T Consensus 116 -DnDPiDV~eIg~~~~~~G~vl~vKvLG~malIDeGE~-DwKiIA----Idvn---------DP~A~~~ndi~DV~~~~P 180 (279)
T KOG1626|consen 116 -DNDPIDVLEIGQEPVLPGCVLQVKVLGLMALIDEGET-DWKIIA----IDVN---------DPLASEYNDIEDVEKLFP 180 (279)
T ss_pred -CCCcceeeEecccccccccEEEEEeeeeeecccCCCc-cceEEE----EECC---------CcchhhhccHHHHHHhCc
Confidence 00110 001 124556667777777544 34554 556664 3311 234567888999999877
Q ss_pred cCCCh
Q 023844 226 HFPVS 230 (276)
Q Consensus 226 ~~pg~ 230 (276)
+....
T Consensus 181 g~L~~ 185 (279)
T KOG1626|consen 181 GLLEA 185 (279)
T ss_pred chHHH
Confidence 76543
No 11
>PRK03760 hypothetical protein; Provisional
Probab=56.26 E-value=7.3 Score=32.39 Aligned_cols=44 Identities=14% Similarity=0.292 Sum_probs=29.3
Q ss_pred EEEEcCCCCcCCCCcCCCC---CCCCCeeEEEEEeCCCCCceEEEecC
Q 023844 71 VFFVNNSGKKVSPWHDIPL---QLGDGVFNFVVEIPKESSAKMEVATD 115 (276)
Q Consensus 71 v~f~~~~g~~iSpwHDIPl---~~~~~~vn~VVEIPrgS~aK~Ei~~~ 115 (276)
+-|.|.+|++++ .|+++. +........|+|+|.|+.+++-+...
T Consensus 63 iiFld~~g~Vv~-i~~~~P~~~~~~~~~a~~VLEl~aG~~~~~gi~~G 109 (117)
T PRK03760 63 VIFLDSNRRVVD-FKTLKPWRIYVPKKPARYIIEGPVGKIRVLKVEVG 109 (117)
T ss_pred EEEECCCCeEEE-EEeCCCccccCCCccceEEEEeCCChHHHcCCCCC
Confidence 344488888665 344322 23456788999999999988777543
No 12
>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i.e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.
Probab=36.13 E-value=36 Score=25.81 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=15.5
Q ss_pred eEEEEcCcccCCccEEEEEEe
Q 023844 169 DVVEIGERRRKIGEILRVKPL 189 (276)
Q Consensus 169 DVlvIg~~~~~~G~Vv~vKvL 189 (276)
..+|++++|+.+|+.+.+|+.
T Consensus 30 ~giVFS~rPl~~~E~~~v~I~ 50 (69)
T PF07177_consen 30 NGIVFSSRPLRIGEKFEVRID 50 (69)
T ss_dssp S-EEEESS-B-TT-EEEEEEE
T ss_pred ceEEEecCCccCCCEEEEEEE
Confidence 489999999999999999984
No 13
>PF02643 DUF192: Uncharacterized ACR, COG1430; InterPro: IPR003795 This entry describes proteins of unknown function.; PDB: 3M7A_B 3PJY_B.
Probab=33.52 E-value=6.9 Score=31.67 Aligned_cols=45 Identities=18% Similarity=0.266 Sum_probs=28.1
Q ss_pred EEEEEcCCCCcCCCCcCCCCC-----CCCCeeEEEEEeCCCCCceEEEec
Q 023844 70 RVFFVNNSGKKVSPWHDIPLQ-----LGDGVFNFVVEIPKESSAKMEVAT 114 (276)
Q Consensus 70 rv~f~~~~g~~iSpwHDIPl~-----~~~~~vn~VVEIPrgS~aK~Ei~~ 114 (276)
-+.|.|.+|+++.--+..|.+ .+..-...|+|+|.|+-.|+.|..
T Consensus 51 Di~fld~~g~Vv~i~~~~~P~~~~~~~~~~~a~~vLE~~aG~~~~~~i~~ 100 (108)
T PF02643_consen 51 DIAFLDSDGRVVKIERMVPPWRTYPCPSYKPARYVLELPAGWFEKLGIKV 100 (108)
T ss_dssp EEEEE-TTSBEEEEEEEE-TT--S-EEECCEECEEEEEETTHHHHHT--T
T ss_pred EEEEECCCCeEEEEEccCCCCccCCCCCCCccCEEEEcCCCchhhcCCCC
Confidence 456668899866544444222 123558899999999988777743
No 14
>smart00588 NEUZ domain in neuralized proteins.
Probab=31.29 E-value=60 Score=27.06 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=31.1
Q ss_pred CCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCce---EEEEEeCCCCcC
Q 023844 164 DNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDW---KIVAISLDDPKA 214 (276)
Q Consensus 164 DgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~Dw---KIIaV~~~DP~~ 214 (276)
+.+.-+.++++++|+.+|+.+.+|+.-.- ..| ==+++-..||..
T Consensus 26 ~~~f~~givFS~rPl~~~E~~~v~i~~~~-------~~w~G~l~~G~Ts~dP~~ 72 (123)
T smart00588 26 ASDFCNALVFSARPLRINELFEVKIEKVV-------RKWSGALRFGVTTCDPAT 72 (123)
T ss_pred cCCcCceEEecCCCCcCCCEEEEEEEEec-------CCccCceEEEEecCCccc
Confidence 33456799999999999999999986421 222 235666778864
No 15
>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A ....
Probab=27.62 E-value=16 Score=28.22 Aligned_cols=10 Identities=60% Similarity=1.066 Sum_probs=7.8
Q ss_pred ccccCCCCCC
Q 023844 145 PQTWEDPSFA 154 (276)
Q Consensus 145 PqTwedP~~~ 154 (276)
|+|||||+.+
T Consensus 56 P~TYEDP~qA 65 (75)
T PF14575_consen 56 PHTYEDPNQA 65 (75)
T ss_dssp GGGSSSHHHH
T ss_pred cccccCHHHH
Confidence 7899998654
No 16
>cd09030 DUF1425 Putative periplasmic lipoprotein. This bacterial family of proteins contains members described as putative lipoproteins, some are also known as YcfL. The function of this family is unknown. Family members have also been annotated as predicted periplasmic lipoproteins (COG5633), and appear to contain an N-terminal membrane lipoprotein lipid attachment side (pfam08139), which is not included in this alignment model.
Probab=26.86 E-value=55 Score=25.83 Aligned_cols=31 Identities=35% Similarity=0.839 Sum_probs=23.5
Q ss_pred cCCCCcceEEEEEcCCCCcC----CCCcCCCCCCC
Q 023844 62 GQPETLDYRVFFVNNSGKKV----SPWHDIPLQLG 92 (276)
Q Consensus 62 G~~~t~~yrv~f~~~~g~~i----SpwHDIPl~~~ 92 (276)
..+-+..||+|+.|++|-.+ ++|+.+.|...
T Consensus 45 ~~~~~l~Yrf~WyD~~G~~v~~~~~~w~~l~l~~~ 79 (101)
T cd09030 45 SKPLTLQYRFYWYDAQGLEVEPEQEPWQSLTLPGG 79 (101)
T ss_pred CCCEEEEEEEEEECCCCCCcCCCCCCCEEEEECCC
Confidence 34668899999999999533 67888877653
No 17
>COG1430 Uncharacterized conserved protein [Function unknown]
Probab=25.22 E-value=1.1e+02 Score=26.13 Aligned_cols=41 Identities=27% Similarity=0.745 Sum_probs=25.9
Q ss_pred EEEEcCCCCcCC-----CCcCCCCCCCCCeeEEEEEeCCCCCceEEE
Q 023844 71 VFFVNNSGKKVS-----PWHDIPLQLGDGVFNFVVEIPKESSAKMEV 112 (276)
Q Consensus 71 v~f~~~~g~~iS-----pwHDIPl~~~~~~vn~VVEIPrgS~aK~Ei 112 (276)
+-|.+.+|++.+ ||+.-|.. ....++.|+|.|+|..+++-+
T Consensus 66 iiFid~dg~i~~i~~~~P~~~~~~~-~~~~~~yvLEl~~G~~~~~~i 111 (126)
T COG1430 66 IIFIDSDGRVVDIVELVPWSTYPCK-SYGPVRYVLELPAGWAARLGI 111 (126)
T ss_pred EEEEcCCCCEEEEEeccccccCCCC-CCCCccEEEEecCCchhhcCC
Confidence 445577887554 44443332 223448999999999886655
No 18
>cd04657 Piwi_ago-like Piwi_ago-like: PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the 5' anchoring of the guide RNA and the other, the catalytic site for slicing.
Probab=21.78 E-value=32 Score=33.88 Aligned_cols=17 Identities=35% Similarity=0.559 Sum_probs=13.9
Q ss_pred eeccccccCcccccccc
Q 023844 256 YRKNAKLGGLNWNVGSC 272 (276)
Q Consensus 256 ~~~~~~~~~~~~~~~~~ 272 (276)
..-|+||||.||.+.+.
T Consensus 173 lKin~KlGG~n~~v~~~ 189 (426)
T cd04657 173 LKINLKLGGINHSLEPD 189 (426)
T ss_pred HHHHHhcCCEeeecccc
Confidence 45689999999998653
No 19
>cd02826 Piwi-like Piwi-like: PIWI domain. Domain found in proteins involved in RNA silencing. RNA silencing refers to a group of related gene-silencing mechanisms mediated by short RNA molecules, including siRNAs, miRNAs, and heterochromatin-related guide RNAs. The central component of the RNA-induced silencing complex (RISC) and related complexes is Argonaute. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the 5' anchoring of the guide RNA and the other, the catalytic site for slicing. This domain is also found in closely related proteins, including the Piwi subfamily, where it is believed to perform a crucial role in germline cells, via a similar mechanism.
Probab=20.95 E-value=34 Score=33.22 Aligned_cols=15 Identities=47% Similarity=0.851 Sum_probs=12.2
Q ss_pred eccccccCccccccc
Q 023844 257 RKNAKLGGLNWNVGS 271 (276)
Q Consensus 257 ~~~~~~~~~~~~~~~ 271 (276)
.-|+||||.||.+.+
T Consensus 150 kin~KlGG~~~~l~~ 164 (393)
T cd02826 150 KVNSKLGGINYILDS 164 (393)
T ss_pred HHhhhhCCeeeEecc
Confidence 458999999998753
No 20
>PF08437 Glyco_transf_8C: Glycosyl transferase family 8 C-terminal; InterPro: IPR013645 This domain is found at the C terminus of bacterial glucosyltransferase and galactosyltransferase proteins. ; GO: 0008918 lipopolysaccharide 3-alpha-galactosyltransferase activity, 0009103 lipopolysaccharide biosynthetic process
Probab=20.83 E-value=48 Score=24.39 Aligned_cols=12 Identities=67% Similarity=1.171 Sum_probs=10.2
Q ss_pred cCCCCcCCCCCC
Q 023844 80 KVSPWHDIPLQL 91 (276)
Q Consensus 80 ~iSpwHDIPl~~ 91 (276)
..|||.|+||..
T Consensus 12 ~~SPWk~~pl~~ 23 (57)
T PF08437_consen 12 KNSPWKDIPLLK 23 (57)
T ss_pred HcCCCCCCCCcC
Confidence 579999999964
No 21
>PF04425 Bul1_N: Bul1 N terminus; InterPro: IPR007519 This domain is the N terminus of Saccharomyces cerevisiae (Baker's yeast) Bul1. Bul1 binds the ubiquitin ligase Rsp5, via an N-terminal PPSY motif (157-160 in P48524 from SWISSPROT) []. The complex containing Bul1 and Rsp5 is involved in intracellular trafficking of the general amino acid permease Gap1 [], degradation of Rog1 in cooperation with Bul2 and GSK-3 [], and mitochondrial inheritance []. Bul1 may contain HEAT repeats. The C terminus is IPR007520 from INTERPRO.
Probab=20.08 E-value=68 Score=32.68 Aligned_cols=45 Identities=22% Similarity=0.400 Sum_probs=35.2
Q ss_pred ecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcC---cccCCccEEE
Q 023844 133 YPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGE---RRRKIGEILR 185 (276)
Q Consensus 133 yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~---~~~~~G~Vv~ 185 (276)
|-+..-||||.|+..-.+ .-|.+.-||.|=+.||= +.+.||...+
T Consensus 216 ~D~sASws~~~i~~~~~~--------~~~~~~~Dp~Dgt~lgl~~~r~l~p~~~Yk 263 (438)
T PF04425_consen 216 FDFSASWSYANIDRLVGD--------NYCPGEVDPYDGTYLGLPNKRILEPGVKYK 263 (438)
T ss_pred hcceeccccccccccccc--------ccCCccccCCCCeeEeCCCCceecCCCeEe
Confidence 677789999999988663 23568899999888874 6677887755
Done!