Query 023844
Match_columns 276
No_of_seqs 198 out of 1009
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 13:43:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023844.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023844hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1e9g_A Ppase, inorganic pyroph 100.0 2.7E-66 9.4E-71 479.2 14.5 184 55-240 1-199 (286)
2 3q46_A TT-ippase; inorganic py 100.0 2.6E-50 8.9E-55 351.1 9.4 141 81-240 1-147 (178)
3 3fq3_A Inorganic pyrophosphata 100.0 1.6E-49 5.5E-54 351.1 12.4 150 76-244 16-174 (197)
4 2prd_A Pyrophosphate phosphohy 100.0 6.7E-49 2.3E-53 341.1 13.6 144 82-244 1-152 (174)
5 3gvf_A Inorganic pyrophosphata 100.0 4.5E-49 1.5E-53 348.0 11.8 150 76-244 16-174 (196)
6 3ld3_A Inorganic pyrophosphata 100.0 1.1E-48 3.7E-53 346.2 12.3 150 76-244 16-174 (199)
7 3d53_A Inorganic pyrophosphata 100.0 9.6E-48 3.3E-52 333.8 12.0 143 83-244 3-153 (173)
8 2au7_A Inorganic pyrophosphata 100.0 1.3E-47 4.5E-52 333.5 12.3 143 83-244 1-152 (175)
9 2bqx_A Inorganic pyrophosphata 100.0 2.7E-47 9.2E-52 330.8 11.3 143 83-244 2-151 (173)
10 3tr4_A Inorganic pyrophosphata 100.0 3.4E-47 1.1E-51 331.7 11.1 142 85-245 6-155 (178)
11 1qez_A Ppase, S-ppase, protein 100.0 2.2E-45 7.6E-50 318.9 12.3 140 81-244 3-149 (173)
12 1sxv_A Inorganic pyrophosphata 100.0 4E-44 1.4E-48 311.0 9.1 132 94-244 11-147 (172)
13 4gio_A Putative lipoprotein; u 37.5 17 0.00058 28.6 2.3 47 66-112 51-103 (107)
14 2yha_A Post-transcriptional ge 28.3 12 0.00042 35.1 0.0 15 257-271 133-147 (388)
15 2yhb_A QDE-2, post-transcripti 22.7 18 0.00062 34.6 0.0 15 257-271 133-147 (437)
16 3o0l_A Uncharacterized protein 21.9 44 0.0015 26.3 2.2 50 63-112 52-106 (112)
No 1
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A
Probab=100.00 E-value=2.7e-66 Score=479.20 Aligned_cols=184 Identities=48% Similarity=0.831 Sum_probs=174.2
Q ss_pred ceeEEEecCCCCcceEEEEEcCCCCcCCCCcCCCCCCC--CCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEE
Q 023844 55 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY 132 (276)
Q Consensus 55 ~~~~~~~G~~~t~~yrv~f~~~~g~~iSpwHDIPl~~~--~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~ 132 (276)
+|+++++|+++|++||+||++ +|+++|||||||++.+ ++.|||||||||||++|||+++++++|||+||.++|++|+
T Consensus 1 ~y~~~~~G~~~t~~~r~~~~~-~g~~~sp~hdIp~~~~~~~~~~nvVIEIP~gs~~KyEidk~~~~nPIkqd~k~G~lr~ 79 (286)
T 1e9g_A 1 TYTTRQIGAKNTLEYKVYIEK-DGKPVSAFHDIPLYADKENNIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRF 79 (286)
T ss_dssp CEEEEEEEETTSTTCEEEEEE-TTEEECTTTTSCSEEETTTTEEEEEEEECTTCCBCEEECTTSTTCCEEECEETTEECB
T ss_pred CceeeeecCCCCcceEEEEEe-CCeecCchhhCCCCCCCCCCEEEEEEEECCCCCeEEEEccCCCCCcchhhhcCCcEEE
Confidence 389999999999999999987 6999999999999865 3799999999999999999999999999999999999997
Q ss_pred ----ecC-cccccCCCCccccCCCCCCCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEE
Q 023844 133 ----YPY-NINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAI 207 (276)
Q Consensus 133 ----yP~-~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV 207 (276)
||+ .|||||||||||||||++.+++ ||+.||||||||||||++++.+|++++|||||+|+|+|+||+|||||||
T Consensus 80 dr~l~~~~~YP~NYGfIPqTledp~~~~~~-t~~~gDgDPLDVlvi~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaV 158 (286)
T 1e9g_A 80 VRNCFPHHGYIHNYGAFPQTWEDPNVSHPE-TKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAI 158 (286)
T ss_dssp CCEETTCCSCSSEEEECSSCCCCTTSEETT-TTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECCEEEEE
T ss_pred EeccCCCCCCccCcccCcccccCccccccc-CCCCCCCCceEEEEecCccCCCccEEEEEEeEEEEeccCCCCCceEEEE
Confidence 554 6999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcCCCCCCcccccccCCChh--------hHHhhhccc
Q 023844 208 SLDDPKAALVNDVDDVEKHFPVSN--------ILKESQKKV 240 (276)
Q Consensus 208 ~~~DP~~~~IndI~DVek~~pg~~--------~l~~~~~~~ 240 (276)
+++||++++|||++||++++|++. .||.+++|.
T Consensus 159 ~~~Dp~~~~i~di~Dl~~~~p~~l~~i~~fF~~YK~leGK~ 199 (286)
T 1e9g_A 159 DINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKP 199 (286)
T ss_dssp ETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCC
T ss_pred eCCCcccccCCCHHHhchhhHHHHHHHHHHHHHhcCcCCCC
Confidence 999999999999999999999985 788888665
No 2
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A
Probab=100.00 E-value=2.6e-50 Score=351.13 Aligned_cols=141 Identities=31% Similarity=0.496 Sum_probs=124.4
Q ss_pred CCCCcCCCCCC-CCCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCcccc
Q 023844 81 VSPWHDIPLQL-GDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVE 159 (276)
Q Consensus 81 iSpwHDIPl~~-~~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~ 159 (276)
+|||||||++. .++.|||||||||||++|||+++++ ++|++|+.... +..||||||||||||+
T Consensus 1 ~spwhdi~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~--g~i~~DR~l~~----~~~YP~NYGfIP~Tl~---------- 64 (178)
T 3q46_A 1 MNPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKAT--GLLKLDRVLYS----PFFYPVDYGIIPQTWY---------- 64 (178)
T ss_dssp CCTTTTSCSCSBTTTBCCCEEEECTTCCEEEEECTTT--SCEEEEEECSS----SCCCSSEEEECTTCCB----------
T ss_pred CCccccCCCCCCCCCEEEEEEEECCCCCeeEEECCCC--CCEEEeecccC----CCCCCcccccCCCccC----------
Confidence 69999999975 4789999999999999999999875 58999976443 3455669999999999
Q ss_pred CCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCCh-----hhHH
Q 023844 160 GAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVS-----NILK 234 (276)
Q Consensus 160 g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~-----~~l~ 234 (276)
+|||||||||||+.++.+|++++|||||+|+|+|+||+|||||||+++||++++|||++||+++...- ..||
T Consensus 65 ---~DgDPlDvlvl~~~~~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK 141 (178)
T 3q46_A 65 ---DDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYK 141 (178)
T ss_dssp ---TTTBCCEEEECCSSCCCTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTT
T ss_pred ---CCCCeeEEEEEcCCCCCCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999765422 3788
Q ss_pred hhhccc
Q 023844 235 ESQKKV 240 (276)
Q Consensus 235 ~~~~~~ 240 (276)
.+++|.
T Consensus 142 ~legK~ 147 (178)
T 3q46_A 142 ELQGKT 147 (178)
T ss_dssp GGGTCC
T ss_pred CcCCCc
Confidence 888554
No 3
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A
Probab=100.00 E-value=1.6e-49 Score=351.10 Aligned_cols=150 Identities=22% Similarity=0.286 Sum_probs=126.7
Q ss_pred CCCCcCCCCcCCCCCCC-CCeeEEEEEeCCC-CCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCC
Q 023844 76 NSGKKVSPWHDIPLQLG-DGVFNFVVEIPKE-SSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSF 153 (276)
Q Consensus 76 ~~g~~iSpwHDIPl~~~-~~~vn~VVEIPrg-S~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~ 153 (276)
..|+++|+||+||++.+ ++.|||||||||| |++|||+++++ ++|+|||...... .||||||||||||+
T Consensus 16 ~~g~~im~~~~ip~g~~~p~~vnvvIEIP~g~s~~KyE~dk~~--g~i~~DR~l~~~~----~YP~NYGfIP~Tl~---- 85 (197)
T 3fq3_A 16 TQGPGSMNIDAISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKA--GALIVDRFLYTPM----TYPGNYGFVPHTLS---- 85 (197)
T ss_dssp ------CCGGGSCSCSSTTSCEEEEEEECTTCCSEEEEEETTT--TEEEEEEECCSSB----CCSSEEEECTTCCC----
T ss_pred cCCCCcCCHHHCCCCCCCCCEEEEEEEecCCCCCEeEEEecCC--CCEEEEeecCCCC----cCCcccccccCccc----
Confidence 47999999999999975 7999999999985 99999999874 7999997654444 45569999999998
Q ss_pred CCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCCh-
Q 023844 154 ANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPVS- 230 (276)
Q Consensus 154 ~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg~- 230 (276)
|||||||||||+++++.+|++++|||||+|+|+|+||+|||||||+++ ||++++|+|++||+++...-
T Consensus 86 ---------~DgDPLDvlvl~~~p~~pG~vi~~r~iGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~~~l~~I 156 (197)
T 3fq3_A 86 ---------EDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQI 156 (197)
T ss_dssp ---------TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCSTTTTCCSGGGSCHHHHHHH
T ss_pred ---------CCCCceEEEEEcCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCCCchhcccCchHHCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 99999999999998765322
Q ss_pred ----hhHHhhhccceeEE
Q 023844 231 ----NILKESQKKVIMKM 244 (276)
Q Consensus 231 ----~~l~~~~~~~~~~~ 244 (276)
..||.+|.++++++
T Consensus 157 ~~fF~~YK~le~~K~v~v 174 (197)
T 3fq3_A 157 AHFFEHYKDLEPGKWVKI 174 (197)
T ss_dssp HHHHHHTTTTSTTCCEEE
T ss_pred HHHHHHhcCcCCCCeEEe
Confidence 37788885566554
No 4
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1
Probab=100.00 E-value=6.7e-49 Score=341.08 Aligned_cols=144 Identities=24% Similarity=0.327 Sum_probs=127.1
Q ss_pred CCCcCCCCCCC-CCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccC
Q 023844 82 SPWHDIPLQLG-DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (276)
Q Consensus 82 SpwHDIPl~~~-~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g 160 (276)
||||+||++.+ ++.|||||||||||++|||++++. ++|++|+..+..+ .||||||||||||+
T Consensus 1 ~~~h~ip~~~~~p~~~nvvIEIP~gs~~KyE~dk~~--g~i~~DR~l~~~~----~YP~NYGfIP~Tl~----------- 63 (174)
T 2prd_A 1 ANLKSLPVGDKAPEVVHMVIEVPRGSGNKYEYDPDL--GAIKLDRVLPGAQ----FYPGDYGFIPSTLA----------- 63 (174)
T ss_dssp CCGGGSCCCTTTTTEEEEEEEECTTCCEEEEEETTT--TEEEEEEECSSSC----CCSSEEEECSSCCC-----------
T ss_pred CCcccCCCCCCCCCEEEEEEEecCCCCeEEEEecCC--CCEEEeeecCCCC----cCCcccccccCccc-----------
Confidence 79999999876 589999999999999999999875 6999998765444 45569999999999
Q ss_pred CCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCC-----hhhHHh
Q 023844 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPV-----SNILKE 235 (276)
Q Consensus 161 ~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg-----~~~l~~ 235 (276)
||||||||||||++++.+|++++|||||+|+|+|+||+|||||||+++||++++|||++||+++... +..||.
T Consensus 64 --~DgDPlDvlvl~~~p~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~ 141 (174)
T 2prd_A 64 --EDGDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEGVKQEIQHFFETYKA 141 (174)
T ss_dssp --TTSSCCEEEEECSSCCCTTCEEEEEEEEEEEEEESSCEEEEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTG
T ss_pred --CCCCceEEEEECCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCcchhhcCChHHCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999987632 247888
Q ss_pred hh--ccceeEE
Q 023844 236 SQ--KKVIMKM 244 (276)
Q Consensus 236 ~~--~~~~~~~ 244 (276)
++ .++++++
T Consensus 142 le~k~gK~v~~ 152 (174)
T 2prd_A 142 LEAKKGKWVKV 152 (174)
T ss_dssp GGGGGTCCEEE
T ss_pred ccccCCCceEE
Confidence 88 2444444
No 5
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Probab=100.00 E-value=4.5e-49 Score=348.02 Aligned_cols=150 Identities=31% Similarity=0.438 Sum_probs=126.0
Q ss_pred CCCCcCCCCcCCCCCCC-CCeeEEEEEeCCCCC-ceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCC
Q 023844 76 NSGKKVSPWHDIPLQLG-DGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSF 153 (276)
Q Consensus 76 ~~g~~iSpwHDIPl~~~-~~~vn~VVEIPrgS~-aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~ 153 (276)
.+|+++++||+||++.+ ++.|||||||||||+ +|||+++++ ++|++|+.....++| |||||||||||+
T Consensus 16 ~~g~~~m~~~~i~~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~--g~i~~DR~l~s~~~Y----P~NYGfIP~Tl~---- 85 (196)
T 3gvf_A 16 TQGPGSMSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKAL--GLLVVDRFIGTGMRY----PVNYGFIPQTLS---- 85 (196)
T ss_dssp -------CGGGSCSCSBTTTBEEEEEEECTTCCSEEEEEETTT--TEEEEEEECTTCCCC----SSEEEECTTCCC----
T ss_pred ccCCCCCchhhCCCCCCCCCEEEEEEEecCCCCceEEEEecCC--CCEEEEeEcCCCccC----CcccccccCccC----
Confidence 47999999999999864 799999999999998 999999875 699999766544444 559999999998
Q ss_pred CCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCC--CcCCCCCCcccccccCCCh-
Q 023844 154 ANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDD--PKAALVNDVDDVEKHFPVS- 230 (276)
Q Consensus 154 ~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~D--P~~~~IndI~DVek~~pg~- 230 (276)
|||||||||||+++++.+|++++|||||+|+|+|+||+|||||||+++| |++++|+|++||+++...-
T Consensus 86 ---------~DgDPLDvlvl~~~p~~pG~vi~~r~iGvl~M~Dege~D~KIIaVp~~d~~p~~~~i~di~dlp~~~l~~I 156 (196)
T 3gvf_A 86 ---------GDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPAYLKDQI 156 (196)
T ss_dssp ---------TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHH
T ss_pred ---------CCCCceEEEEecCCccCCeeEEEEEEEEEEEEecCCCcccEEEEEecCCcCchhhhcCchhhCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 9999999999998765322
Q ss_pred ----hhHHhhhccceeEE
Q 023844 231 ----NILKESQKKVIMKM 244 (276)
Q Consensus 231 ----~~l~~~~~~~~~~~ 244 (276)
..||.+|..+++++
T Consensus 157 ~~fF~~YK~le~gK~v~v 174 (196)
T 3gvf_A 157 KHFFEQYKALEKGKWVKV 174 (196)
T ss_dssp HHHHHHTTTTSTTCCEEE
T ss_pred HHHHHHhcCcCCCCeEEe
Confidence 37888885555554
No 6
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Probab=100.00 E-value=1.1e-48 Score=346.24 Aligned_cols=150 Identities=25% Similarity=0.335 Sum_probs=123.2
Q ss_pred CCCCcCCCCcCCCCCCC-CCeeEEEEEeCCCC-CceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCC
Q 023844 76 NSGKKVSPWHDIPLQLG-DGVFNFVVEIPKES-SAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSF 153 (276)
Q Consensus 76 ~~g~~iSpwHDIPl~~~-~~~vn~VVEIPrgS-~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~ 153 (276)
.+|+++++||+||++.+ ++.||||||||||| ++|||+++++ ++|++|+..... ..||||||||||||+
T Consensus 16 ~~g~~~m~~~~i~~g~~~p~~vnvvIEIP~gs~~~KyE~dk~~--G~l~~DR~l~~~----~~YP~NYGfIP~Tl~---- 85 (199)
T 3ld3_A 16 TQGPGSMNLDDIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKN--GALWVDRFLPTA----MYYPCNYGFIPNTIA---- 85 (199)
T ss_dssp ----------CCCSCTTTTTSEEEEEEECTTCCSEEEEECTTT--CCEEEEEECSSS----BCCSSEEEECTTCCC----
T ss_pred cCCCccCChHHCCCCCCCCCEEEEEEEecCCCCCEEEEEecCC--CCEEEEEEcCCC----CcCCccccccccccc----
Confidence 47999999999999865 79999999999998 5999999875 799999765433 345569999999998
Q ss_pred CCccccCCCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCCh-
Q 023844 154 ANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPVS- 230 (276)
Q Consensus 154 ~~~~~~g~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg~- 230 (276)
|||||||||||+++++.+|++++|||||+|+|+|+||+|||||||+++ ||++++|+|++||+++...-
T Consensus 86 ---------~DGDPLDvlvl~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~~~l~~I 156 (199)
T 3ld3_A 86 ---------GDGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNYSDLPSSFLDSI 156 (199)
T ss_dssp ---------TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHH
T ss_pred ---------CCCCceEEEEecCCCCCCceEEEEEEEEEEEEecCCCCcceEEEEECCCCCccccccCchHHCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 99999999999998765322
Q ss_pred ----hhHHhhhccceeEE
Q 023844 231 ----NILKESQKKVIMKM 244 (276)
Q Consensus 231 ----~~l~~~~~~~~~~~ 244 (276)
..||.+|.++++++
T Consensus 157 ~~fF~~YK~le~gK~v~v 174 (199)
T 3ld3_A 157 SHFFSFYKKLEKDKFVSV 174 (199)
T ss_dssp HHHHHHTTTTSTTCCEEE
T ss_pred HHHHHHhcCcCCCceEEe
Confidence 37888887666654
No 7
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A*
Probab=100.00 E-value=9.6e-48 Score=333.79 Aligned_cols=143 Identities=25% Similarity=0.370 Sum_probs=127.5
Q ss_pred CCcCCCCCCCCCeeEEEEEeCCCCC-ceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCC
Q 023844 83 PWHDIPLQLGDGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGA 161 (276)
Q Consensus 83 pwHDIPl~~~~~~vn~VVEIPrgS~-aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~ 161 (276)
+||+||++.+++.|||||||||||+ +|||+++++ ++|++|+.....+ .||||||||||||+
T Consensus 3 ~~~~ip~~~~p~~~nvvIEIP~gs~p~KyE~dk~~--g~i~~DR~l~~~~----~YP~NYGfIP~Tl~------------ 64 (173)
T 3d53_A 3 FIKKIKAKANNNEINVIIEIPMNSGPIKYEFDKES--GALFVDRFMQTTM----SYPCNYGFIPDTLS------------ 64 (173)
T ss_dssp CGGGSCSCSSTTCEEEEEEECTTCCSEEEEECTTT--CCEEEEEECCSSC----CCSSEEEECTTCCC------------
T ss_pred chhhCCCCCCCCeEEEEEEeCCCCCceeEEEecCC--CCEEEeeecCCCC----cCCcccchhhCCcc------------
Confidence 8999999977899999999999999 999999875 7999998765444 45569999999998
Q ss_pred CCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCC-----hhhHH
Q 023844 162 FGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPV-----SNILK 234 (276)
Q Consensus 162 ~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg-----~~~l~ 234 (276)
|||||||||||+++++.+|++++|||||+|+|+|+||+|||||||+++ ||+++++||++||+++... +..||
T Consensus 65 -~DgDPlDvlvl~~~p~~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK 143 (173)
T 3d53_A 65 -NDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYK 143 (173)
T ss_dssp -TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTT
T ss_pred -CCCCceEEEEECCCccCCceEEEEEEEEEEEEccCCCccceEEEEeCCCCCcchhhcCChhHCCHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999 9999999999999987642 24788
Q ss_pred hhhccceeEE
Q 023844 235 ESQKKVIMKM 244 (276)
Q Consensus 235 ~~~~~~~~~~ 244 (276)
.+|.++++++
T Consensus 144 ~le~gK~v~v 153 (173)
T 3d53_A 144 DLEKGKWVKV 153 (173)
T ss_dssp TTSTTCCEEE
T ss_pred CccCCCcEEE
Confidence 8885555554
No 8
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Probab=100.00 E-value=1.3e-47 Score=333.46 Aligned_cols=143 Identities=24% Similarity=0.329 Sum_probs=126.5
Q ss_pred CCcCCCCCCC-CCeeEEEEEeCCCCC-ceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccC
Q 023844 83 PWHDIPLQLG-DGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (276)
Q Consensus 83 pwHDIPl~~~-~~~vn~VVEIPrgS~-aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g 160 (276)
+||+||++.+ ++.|||||||||||+ +|||+++++ ++|+||+.... +..||||||||||||+
T Consensus 1 ~~~~ip~~~~~p~~~nvvIEIP~gs~p~KyE~dk~~--g~i~~DR~l~~----~~~YP~NYGfIP~Tl~----------- 63 (175)
T 2au7_A 1 SLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKES--GALFVDQFMST----AMFYPCNYGYINHTLS----------- 63 (175)
T ss_dssp CGGGCCSCSBTTTBEEEEEEECTTCCSEEEEECTTT--CCEEEEEECSS----SCCCSSEEEECTTCCC-----------
T ss_pred CcccCCCCCCCCCEEEEEEEecCCCCceeEEEecCC--CCEEEeeecCC----CCcCCcCcCccCCccC-----------
Confidence 6999999875 589999999999999 999999875 79999976543 4445669999999998
Q ss_pred CCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCC-----hhhH
Q 023844 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPV-----SNIL 233 (276)
Q Consensus 161 ~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg-----~~~l 233 (276)
|||||||||||+++++.+|++++|||||+|+|+|+||+|||||||+++ ||++++|||++||+++... +..|
T Consensus 64 --~DgDPlDvlvl~~~p~~pG~vi~~r~iGvl~m~Deg~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~Y 141 (175)
T 2au7_A 64 --LDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHY 141 (175)
T ss_dssp --TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHT
T ss_pred --CCCCceEEEEECCCCCCCceEEEEEEEEEEEeecCCCCccEEEEEeCCCCCcchhhCCChHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999 9999999999999987532 2377
Q ss_pred HhhhccceeEE
Q 023844 234 KESQKKVIMKM 244 (276)
Q Consensus 234 ~~~~~~~~~~~ 244 (276)
|.+|.++++++
T Consensus 142 K~le~gK~v~v 152 (175)
T 2au7_A 142 KDLEKGKWVKV 152 (175)
T ss_dssp TTTSTTCCEEE
T ss_pred hCccCCCCeEE
Confidence 88885555554
No 9
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A
Probab=100.00 E-value=2.7e-47 Score=330.77 Aligned_cols=143 Identities=27% Similarity=0.416 Sum_probs=122.0
Q ss_pred CCcCCCCCCCCCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCC
Q 023844 83 PWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAF 162 (276)
Q Consensus 83 pwHDIPl~~~~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~ 162 (276)
+||+||++.+++.|||||||||||++|||++++ .++|++|+..+..+ .||||||||||||+
T Consensus 2 ~~~~ip~~~~p~~~nvvIEIP~gs~~KyE~dk~--~g~i~~DR~l~~~~----~YP~NYGfIP~Tl~------------- 62 (173)
T 2bqx_A 2 NLEKLEVSHDADSLCVVIEISKHSNIKYELDKE--SGALMVDRVLYGAQ----NYPANYGFVPNTLG------------- 62 (173)
T ss_dssp -----CCCEETTEEEEEEEECTTCSEEEEECTT--TCCEEEEEECSSSC----CCSSEEEECSSCCC-------------
T ss_pred CcccCCCCCCCCeEEEEEEECCCCCeEEEEecC--CCCEEEeeecCCCC----cCcccccccccccC-------------
Confidence 799999997789999999999999999999986 57999997765444 45569999999998
Q ss_pred CCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCC-----hhhHHh
Q 023844 163 GDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPV-----SNILKE 235 (276)
Q Consensus 163 GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg-----~~~l~~ 235 (276)
||||||||||||++++.+|++++|||||+|+|+|+||+|||||||+++ ||+++++||++||+++... +..||.
T Consensus 63 ~DgDPlDvlvl~~~p~~~G~vi~~r~iGvl~m~D~g~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~ 142 (173)
T 2bqx_A 63 SDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKD 142 (173)
T ss_dssp TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCCTTTTCCSGGGSCHHHHHHHHHHHHHTTT
T ss_pred CCCCceEEEEECCCCCCCceEEEEEEEEEEEeccCCCCccEEEEEeCCCCCcchhhcCChhHCCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999 9999999999999887532 247788
Q ss_pred hhccceeEE
Q 023844 236 SQKKVIMKM 244 (276)
Q Consensus 236 ~~~~~~~~~ 244 (276)
++.++++++
T Consensus 143 le~gK~v~~ 151 (173)
T 2bqx_A 143 LEPNKWVKV 151 (173)
T ss_dssp TSTTCCEEE
T ss_pred ccCCCceee
Confidence 885555543
No 10
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0
Probab=100.00 E-value=3.4e-47 Score=331.66 Aligned_cols=142 Identities=23% Similarity=0.297 Sum_probs=123.3
Q ss_pred cCCCCCCCCCeeEEEEEeCCCCC-ceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCC
Q 023844 85 HDIPLQLGDGVFNFVVEIPKESS-AKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFG 163 (276)
Q Consensus 85 HDIPl~~~~~~vn~VVEIPrgS~-aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~G 163 (276)
|+||++.+.+.|||||||||||+ +|||+++++ ++|+||+...... .||||||||||||+ |
T Consensus 6 h~ip~g~~~~~vnvvIEIP~gs~~~KyE~dk~~--g~i~~DR~l~~~~----~YP~NYGfIP~Tl~-------------~ 66 (178)
T 3tr4_A 6 FLVSAGKGIDDFNVIIEIPANGGEVKYEYDKEL--GFLTVDRFMPTSM----RYPCNYGFVPSTLA-------------Q 66 (178)
T ss_dssp --CCCEEETTEEEEEEEECTTCCSEEEEEETTT--TEEEEEEECCSSB----CCSSEEEECTTCCC-------------T
T ss_pred ccCCCCCCCCEEEEEEEecCCCCcEEEEEecCC--CcEEEEEecCcCc----cCCccccccCCccc-------------C
Confidence 99999876699999999999999 999999874 7999997655444 45569999999998 9
Q ss_pred CCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCCh-----hhHHhh
Q 023844 164 DNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPVS-----NILKES 236 (276)
Q Consensus 164 DgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg~-----~~l~~~ 236 (276)
|||||||||||++++.+|++++|||||+|+|+|+||+|||||||+++ ||++++|+|++||+++...- ..||.+
T Consensus 67 DgDPlDvlvl~~~p~~pG~vi~~r~iGvl~m~Dege~D~KiIaVp~~~~dp~~~~i~di~dl~~~~l~~i~~fF~~YK~l 146 (178)
T 3tr4_A 67 DGDPLDVLVLTPVPVQPGVLMRVRALGIMKMEDEAGEDSKVLAVPVVKACRAYEAIQSLKDISSLLLDAISHFFERYKDL 146 (178)
T ss_dssp TSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTT
T ss_pred CCCceEEEEECCCCCCCeeEEEEEEEEEEEeccCCCCcceEEEEEcCCCCchhhhcCchhhCCHHHHHHHHHHHHHHcCc
Confidence 99999999999999999999999999999999999999999999999 99999999999998765322 377888
Q ss_pred hccceeEEE
Q 023844 237 QKKVIMKMI 245 (276)
Q Consensus 237 ~~~~~~~~~ 245 (276)
|.++++++.
T Consensus 147 e~gK~v~~~ 155 (178)
T 3tr4_A 147 EPNKWAKVK 155 (178)
T ss_dssp STTCCEEEE
T ss_pred CCCceeEec
Confidence 876666543
No 11
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1
Probab=100.00 E-value=2.2e-45 Score=318.88 Aligned_cols=140 Identities=34% Similarity=0.469 Sum_probs=121.8
Q ss_pred CCCCcCCCCCCCCCeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccC
Q 023844 81 VSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEG 160 (276)
Q Consensus 81 iSpwHDIPl~~~~~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g 160 (276)
++++++.| +.|||||||||||++|||++++. ++|++|+.....++ ||||||||||||+
T Consensus 3 i~~g~~~p-----~~~nvvIEIP~gs~~KyE~dk~~--g~l~~DR~l~~~~~----YP~NYGfIP~Tl~----------- 60 (173)
T 1qez_A 3 LSPGKNAP-----DVVNVLVEIPQGSNIKYEYDDEE--GVIKVDRVLYTSMN----YPFNYGFIPGTLE----------- 60 (173)
T ss_dssp CCSCTTTT-----TSEEEEEEECTTCCEEEEEETTT--TEEEEEEECSSSBC----CSSEEEECTTCCC-----------
T ss_pred cCCCCCCC-----CeEEEEEEECCCCCeEEEEecCC--CCEEEEeecCCCCc----CCccccccccccC-----------
Confidence 56777766 78999999999999999999864 69999976554444 4569999999998
Q ss_pred CCCCCCcceEEEEcCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCC--CCcCCCCCCcccccccCCC-----hhhH
Q 023844 161 AFGDNDPVDVVEIGERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLD--DPKAALVNDVDDVEKHFPV-----SNIL 233 (276)
Q Consensus 161 ~~GDgDPLDVlvIg~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~--DP~~~~IndI~DVek~~pg-----~~~l 233 (276)
|||||||||||+++++.+|++++|||||+|+|+|+||+|||||||+++ ||++++|||++||+++... +..|
T Consensus 61 --~DgDPlDvlvl~~~p~~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~Y 138 (173)
T 1qez_A 61 --EDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHY 138 (173)
T ss_dssp --TTSSCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHT
T ss_pred --CCCCceEEEEECCCCCCCccEEEEEEEEEEEeecCCCcccEEEEEeCCCCCcchhhcCChHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999 9999999999999987642 2378
Q ss_pred HhhhccceeEE
Q 023844 234 KESQKKVIMKM 244 (276)
Q Consensus 234 ~~~~~~~~~~~ 244 (276)
|.++.++++++
T Consensus 139 K~le~gK~v~~ 149 (173)
T 1qez_A 139 KELEPGKYVKI 149 (173)
T ss_dssp TTTSTTCCEEE
T ss_pred ccccCCCceEE
Confidence 88885455543
No 12
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A
Probab=100.00 E-value=4e-44 Score=310.98 Aligned_cols=132 Identities=24% Similarity=0.338 Sum_probs=113.7
Q ss_pred CeeEEEEEeCCCCCceEEEecCCCCCceeeeeeCCeeEEecCcccccCCCCccccCCCCCCCccccCCCCCCCcceEEEE
Q 023844 94 GVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEI 173 (276)
Q Consensus 94 ~~vn~VVEIPrgS~aK~Ei~~~e~~npIkqD~k~G~lR~yP~~~p~NYGfIPqTwedP~~~~~~~~g~~GDgDPLDVlvI 173 (276)
-.|||||||||||++|||++++. +.+++|+... .+..||||||||||||+ |||||||||||
T Consensus 11 ~~~nvvIEIP~gs~~KyE~Dk~~--G~l~~DR~l~----~~~~YP~NYGfIP~Tl~-------------~DGDPlDvlvl 71 (172)
T 1sxv_A 11 MQFDVTIEIPKGQRNKYEVDHET--GRVRLDRYLY----TPMAYPTDYGFIEDTLG-------------DDGDPLDALVL 71 (172)
T ss_dssp CCEEEEEEECTTCCEEC-CCTTT--CCCCCCEECS----SSCCCSSEEEEETTCCC-------------TTSSCCEEEEC
T ss_pred eEEEEEEEECCCCCeEEEEEcCC--CCEEEEeecC----CCCCCCcCcCccCCccC-------------CCCCCeEEEEE
Confidence 47999999999999999998754 5677776533 34467779999999998 99999999999
Q ss_pred cCcccCCccEEEEEEeeeEEeeeCCCCceEEEEEeCCCCcCCCCCCcccccccCCCh-----hhHHhhhccceeEE
Q 023844 174 GERRRKIGEILRVKPLSALAMIDEGELDWKIVAISLDDPKAALVNDVDDVEKHFPVS-----NILKESQKKVIMKM 244 (276)
Q Consensus 174 g~~~~~~G~Vv~vKvLGvL~MIDeGE~DwKIIaV~~~DP~~~~IndI~DVek~~pg~-----~~l~~~~~~~~~~~ 244 (276)
+++|+.+|++++|||||+|+|+|+||+|||||||+++||++++|||++||+++...- ..||.+|.++++++
T Consensus 72 ~~~p~~pG~vi~~r~iGvl~m~Dege~D~KIIaVp~~Dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~gK~v~v 147 (172)
T 1sxv_A 72 LPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVKA 147 (172)
T ss_dssp CSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEE
T ss_pred cCCCcCCceEEEEEEEEEEEecCCCCCCCEEEEEeCCCCCccccCChHHCCHHHHHHHHHHHHHhcCcCCCCeEEe
Confidence 999999999999999999999999999999999999999999999999999875322 37888886666543
No 13
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=37.45 E-value=17 Score=28.64 Aligned_cols=47 Identities=11% Similarity=0.329 Sum_probs=30.8
Q ss_pred CcceEEEEEcCCCCcC-----CCCcCCCCCCCC-CeeEEEEEeCCCCCceEEE
Q 023844 66 TLDYRVFFVNNSGKKV-----SPWHDIPLQLGD-GVFNFVVEIPKESSAKMEV 112 (276)
Q Consensus 66 t~~yrv~f~~~~g~~i-----SpwHDIPl~~~~-~~vn~VVEIPrgS~aK~Ei 112 (276)
+..||+|..|++|-.+ +||+-+.|.... -.+..|-=-|+.++-+.+|
T Consensus 51 ~l~Yrf~WyD~~G~~v~~~~~~~W~~~~l~g~~~~~i~~vap~~~A~~fRl~i 103 (107)
T 4gio_A 51 DVIYKVDWLDKDGFVLRDVLNEDYQALRIPAGQEVILRKLASDTRANDFRLEI 103 (107)
T ss_dssp EEEEEEEEECTTSCBCCSSCCCCCEEEEECTTCCEEEEEECSSTTCCEEEEEE
T ss_pred EEEEEEEEECCCCCCcCCCCCCCCEEEEEcCCCeEEEEEECCCCCeEEEEEEE
Confidence 5779999999999766 579988776543 3344444444444455554
No 14
>2yha_A Post-transcriptional gene silencing protein QDE-2; RNA binding protein, argonaute, miRNA, siRNA; HET: GOL; 1.85A {Neurospora crassa} PDB: 2xdy_A
Probab=28.34 E-value=12 Score=35.14 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=12.4
Q ss_pred eccccccCccccccc
Q 023844 257 RKNAKLGGLNWNVGS 271 (276)
Q Consensus 257 ~~~~~~~~~~~~~~~ 271 (276)
.-|+||||.||.+..
T Consensus 133 KiN~KlGG~n~~l~~ 147 (388)
T 2yha_A 133 KVNLKFGGTNHNIKT 147 (388)
T ss_dssp HHHHHTTCBCCCCCS
T ss_pred HHHHHhCCcceeccc
Confidence 458999999998754
No 15
>2yhb_A QDE-2, post-transcriptional gene silencing protein QDE-2; RNA binding protein, argonaute, miRNA, siRNA; 3.65A {Neurospora crassa}
Probab=22.68 E-value=18 Score=34.62 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=12.4
Q ss_pred eccccccCccccccc
Q 023844 257 RKNAKLGGLNWNVGS 271 (276)
Q Consensus 257 ~~~~~~~~~~~~~~~ 271 (276)
.-|+||||.||.+..
T Consensus 133 KiN~KlGG~n~~l~~ 147 (437)
T 2yhb_A 133 KVNLKFGGTNHNIKT 147 (437)
T ss_dssp HHHHHTTCBCCCCSS
T ss_pred HHHHHhCCcceeccc
Confidence 458999999998754
No 16
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=21.93 E-value=44 Score=26.34 Aligned_cols=50 Identities=14% Similarity=0.274 Sum_probs=30.7
Q ss_pred CCCCcceEEEEEcCCCCcC----CCCcCCCCCCCC-CeeEEEEEeCCCCCceEEE
Q 023844 63 QPETLDYRVFFVNNSGKKV----SPWHDIPLQLGD-GVFNFVVEIPKESSAKMEV 112 (276)
Q Consensus 63 ~~~t~~yrv~f~~~~g~~i----SpwHDIPl~~~~-~~vn~VVEIPrgS~aK~Ei 112 (276)
.+-+..||+|..|.+|-.+ +||+.+.|.+.. -.+..+-=-|+-++.+.++
T Consensus 52 ~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~vapn~~A~~fRlyl 106 (112)
T 3o0l_A 52 KDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTALSPNATAVRCELYV 106 (112)
T ss_dssp SCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEEECSSTTCCEEEEEE
T ss_pred CCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEEECCCCCeEEEEEEE
Confidence 3446889999999999654 578888776542 3344443334444444444
Done!