Query 023845
Match_columns 276
No_of_seqs 127 out of 305
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 13:44:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2axo_A Hypothetical protein AT 100.0 1.9E-54 6.4E-59 398.1 17.8 215 41-275 41-261 (270)
2 2r2c_A 28 kDa outer membrane p 99.9 2.4E-24 8.1E-29 187.4 5.6 168 103-275 2-179 (183)
3 1fo5_A Thioredoxin; disulfide 98.4 4.9E-07 1.7E-11 65.1 5.2 80 43-145 3-83 (85)
4 1nho_A Probable thioredoxin; b 98.3 4.7E-07 1.6E-11 65.1 3.9 80 44-146 3-83 (85)
5 1wjk_A C330018D20RIK protein; 98.2 1.6E-06 5.5E-11 66.8 5.9 80 43-148 16-96 (100)
6 2k8s_A Thioredoxin; dimer, str 98.2 1.1E-06 3.7E-11 64.2 4.2 68 45-134 3-70 (80)
7 1ilo_A Conserved hypothetical 98.2 9.4E-06 3.2E-10 57.5 8.4 72 44-142 2-75 (77)
8 3ic4_A Glutaredoxin (GRX-1); s 98.0 7.9E-06 2.7E-10 60.7 6.2 79 45-144 13-91 (92)
9 1ego_A Glutaredoxin; electron 97.9 1.2E-05 4.1E-10 58.3 5.5 78 45-145 2-81 (85)
10 1ttz_A Conserved hypothetical 97.9 1.3E-05 4.4E-10 60.9 5.3 74 46-148 3-77 (87)
11 4dvc_A Thiol:disulfide interch 97.9 1.6E-05 5.4E-10 65.2 6.1 100 42-147 22-181 (184)
12 2lqo_A Putative glutaredoxin R 97.9 4E-05 1.4E-09 59.0 7.7 75 46-146 6-82 (92)
13 1r7h_A NRDH-redoxin; thioredox 97.8 5.2E-05 1.8E-09 53.4 7.3 72 46-144 3-74 (75)
14 2hls_A Protein disulfide oxido 97.8 4.9E-05 1.7E-09 67.1 8.2 89 40-148 136-226 (243)
15 2l57_A Uncharacterized protein 97.8 7.3E-05 2.5E-09 57.9 8.1 89 40-150 25-119 (126)
16 1xwb_A Thioredoxin; dimerizati 97.8 8.5E-05 2.9E-09 54.9 8.0 82 41-146 20-105 (106)
17 1hyu_A AHPF, alkyl hydroperoxi 97.8 5.7E-05 2E-09 73.5 8.8 82 41-146 116-198 (521)
18 3h8q_A Thioredoxin reductase 3 97.7 3.7E-05 1.3E-09 60.3 5.7 66 46-134 19-84 (114)
19 3gyk_A 27KDA outer membrane pr 97.7 0.00013 4.5E-09 59.8 9.1 99 42-146 22-171 (175)
20 3nzn_A Glutaredoxin; structura 97.7 4.1E-05 1.4E-09 58.7 5.6 76 45-143 23-101 (103)
21 3hd5_A Thiol:disulfide interch 97.7 0.00011 3.7E-09 61.7 8.4 99 42-145 25-181 (195)
22 3fkf_A Thiol-disulfide oxidore 97.7 0.00013 4.3E-09 57.0 8.3 99 40-147 32-145 (148)
23 1h75_A Glutaredoxin-like prote 97.7 5.8E-05 2E-09 54.4 5.8 72 46-144 3-74 (81)
24 3qfa_C Thioredoxin; protein-pr 97.7 7.3E-05 2.5E-09 57.7 6.6 81 40-145 30-114 (116)
25 1kte_A Thioltransferase; redox 97.7 7E-05 2.4E-09 56.6 6.3 66 46-130 14-79 (105)
26 3msz_A Glutaredoxin 1; alpha-b 97.7 1.7E-05 5.9E-10 57.8 2.6 76 44-145 4-84 (89)
27 1faa_A Thioredoxin F; electron 97.7 9.1E-05 3.1E-09 57.0 6.8 83 40-146 36-122 (124)
28 2l6c_A Thioredoxin; oxidoreduc 97.7 0.00023 8E-09 54.1 8.9 82 41-147 19-105 (110)
29 1fov_A Glutaredoxin 3, GRX3; a 97.6 0.00014 4.9E-09 52.1 7.2 72 46-145 3-74 (82)
30 2ywm_A Glutaredoxin-like prote 97.6 0.00014 4.8E-09 62.1 8.1 83 40-146 134-218 (229)
31 1dby_A Chloroplast thioredoxin 97.6 0.00012 4E-09 54.5 6.5 82 41-146 19-105 (107)
32 3hz8_A Thiol:disulfide interch 97.6 0.00026 9E-09 60.0 9.3 100 42-146 24-181 (193)
33 2trx_A Thioredoxin; electron t 97.6 0.00042 1.4E-08 51.5 9.1 81 41-145 20-105 (108)
34 3h93_A Thiol:disulfide interch 97.6 0.0002 7E-09 59.8 8.1 101 41-146 24-182 (192)
35 3c1r_A Glutaredoxin-1; oxidize 97.6 8.8E-05 3E-09 58.7 5.4 66 46-130 27-93 (118)
36 2rem_A Disulfide oxidoreductas 97.6 0.00042 1.4E-08 57.6 9.7 101 42-147 25-183 (193)
37 1nsw_A Thioredoxin, TRX; therm 97.5 0.00019 6.6E-09 53.2 6.9 82 41-146 17-103 (105)
38 1ep7_A Thioredoxin CH1, H-type 97.5 0.00018 6.3E-09 53.9 6.8 82 41-146 24-109 (112)
39 3qmx_A Glutaredoxin A, glutare 97.5 0.0002 7E-09 55.1 7.0 73 44-144 16-89 (99)
40 3m9j_A Thioredoxin; oxidoreduc 97.5 0.00016 5.5E-09 53.5 6.2 80 41-145 20-103 (105)
41 1thx_A Thioredoxin, thioredoxi 97.5 0.00044 1.5E-08 51.8 8.7 80 44-146 27-111 (115)
42 2yzu_A Thioredoxin; redox prot 97.5 0.00026 9E-09 52.2 7.3 85 40-148 17-106 (109)
43 2dj1_A Protein disulfide-isome 97.5 0.00015 5.1E-09 56.8 6.3 88 40-148 33-124 (140)
44 2i4a_A Thioredoxin; acidophIle 97.5 0.00027 9.3E-09 52.2 7.4 82 41-146 20-106 (107)
45 2hze_A Glutaredoxin-1; thiored 97.5 9.7E-05 3.3E-09 57.6 5.0 67 45-130 20-86 (114)
46 1z6m_A Conserved hypothetical 97.5 0.00049 1.7E-08 56.5 9.5 99 42-144 27-174 (175)
47 1xfl_A Thioredoxin H1; AT3G510 97.5 0.00025 8.7E-09 55.4 7.5 81 41-146 38-122 (124)
48 1fb6_A Thioredoxin M; electron 97.5 0.00027 9.3E-09 52.1 7.1 81 41-145 18-103 (105)
49 2ct6_A SH3 domain-binding glut 97.5 0.00014 4.8E-09 57.0 5.8 24 45-68 9-38 (111)
50 1t1v_A SH3BGRL3, SH3 domain-bi 97.5 0.00035 1.2E-08 52.5 7.8 73 46-144 4-82 (93)
51 3ctg_A Glutaredoxin-2; reduced 97.5 5.7E-05 1.9E-09 61.0 3.5 66 46-130 39-105 (129)
52 1syr_A Thioredoxin; SGPP, stru 97.5 0.00033 1.1E-08 53.1 7.6 83 40-147 25-111 (112)
53 2h30_A Thioredoxin, peptide me 97.5 0.00043 1.5E-08 55.2 8.6 101 40-148 37-156 (164)
54 2vm1_A Thioredoxin, thioredoxi 97.5 0.00016 5.5E-09 54.6 5.7 83 41-148 28-114 (118)
55 2fgx_A Putative thioredoxin; N 97.5 4.3E-05 1.5E-09 60.6 2.5 75 43-143 29-106 (107)
56 1t00_A Thioredoxin, TRX; redox 97.5 0.00029 1E-08 52.9 7.1 81 41-145 23-108 (112)
57 3d6i_A Monothiol glutaredoxin- 97.5 0.00047 1.6E-08 51.9 8.2 82 41-145 21-106 (112)
58 1w4v_A Thioredoxin, mitochondr 97.5 0.00028 9.6E-09 54.3 7.0 81 41-145 31-116 (119)
59 3p2a_A Thioredoxin 2, putative 97.5 0.0003 1E-08 56.1 7.3 85 39-147 53-142 (148)
60 1zzo_A RV1677; thioredoxin fol 97.5 0.00022 7.4E-09 54.5 6.2 98 40-147 24-134 (136)
61 2znm_A Thiol:disulfide interch 97.4 0.00039 1.3E-08 57.9 8.1 99 42-145 22-177 (195)
62 2xc2_A Thioredoxinn; oxidoredu 97.4 0.00033 1.1E-08 53.4 7.0 79 41-145 33-115 (117)
63 2voc_A Thioredoxin; electron t 97.4 0.00076 2.6E-08 51.2 9.1 86 40-149 16-106 (112)
64 1wik_A Thioredoxin-like protei 97.4 0.00021 7.2E-09 55.4 6.0 63 46-134 17-84 (109)
65 3die_A Thioredoxin, TRX; elect 97.4 0.00044 1.5E-08 51.0 7.5 83 40-146 18-105 (106)
66 1lu4_A Soluble secreted antige 97.4 0.00037 1.3E-08 53.5 7.3 96 40-146 23-134 (136)
67 1ti3_A Thioredoxin H, PTTRXH1; 97.4 0.00032 1.1E-08 52.5 6.7 79 43-145 27-109 (113)
68 2vim_A Thioredoxin, TRX; thior 97.4 0.00029 9.9E-09 51.8 6.3 80 41-145 19-102 (104)
69 3hxs_A Thioredoxin, TRXP; elec 97.4 0.00064 2.2E-08 53.3 8.7 84 41-148 51-139 (141)
70 2klx_A Glutaredoxin; thioredox 97.4 0.00081 2.8E-08 49.5 8.7 70 45-144 7-77 (89)
71 2i1u_A Thioredoxin, TRX, MPT46 97.4 0.00045 1.5E-08 52.4 7.3 83 41-147 30-117 (121)
72 3gnj_A Thioredoxin domain prot 97.4 0.00044 1.5E-08 51.5 7.0 81 41-145 22-107 (111)
73 2lrn_A Thiol:disulfide interch 97.4 0.00091 3.1E-08 53.1 9.1 103 40-148 28-141 (152)
74 2khp_A Glutaredoxin; thioredox 97.4 0.00033 1.1E-08 51.7 6.0 63 45-133 7-69 (92)
75 2j23_A Thioredoxin; immune pro 97.3 0.00046 1.6E-08 53.4 7.0 85 39-146 31-119 (121)
76 2pu9_C TRX-F, thioredoxin F-ty 97.3 0.00038 1.3E-08 52.4 6.3 81 41-145 24-108 (111)
77 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00029 1E-08 54.4 5.8 67 46-134 21-87 (113)
78 3ha9_A Uncharacterized thiored 97.3 0.00044 1.5E-08 55.6 7.0 101 40-147 36-163 (165)
79 3lor_A Thiol-disulfide isomera 97.3 0.00021 7.1E-09 56.9 4.9 100 40-148 29-155 (160)
80 3l4n_A Monothiol glutaredoxin- 97.3 0.00013 4.6E-09 59.1 3.8 69 46-134 16-84 (127)
81 2cq9_A GLRX2 protein, glutared 97.3 0.00053 1.8E-08 54.9 7.2 63 46-130 29-91 (130)
82 4euy_A Uncharacterized protein 97.3 0.00087 3E-08 50.1 8.0 82 41-147 18-104 (105)
83 1aba_A Glutaredoxin; electron 97.3 0.00018 6.1E-09 53.3 4.1 69 46-133 2-78 (87)
84 2e0q_A Thioredoxin; electron t 97.3 0.00067 2.3E-08 49.4 7.0 81 41-146 16-101 (104)
85 3ul3_B Thioredoxin, thioredoxi 97.3 0.00063 2.2E-08 53.0 7.2 82 40-145 41-127 (128)
86 2b5x_A YKUV protein, TRXY; thi 97.3 0.00029 9.8E-09 54.7 5.2 98 40-147 28-144 (148)
87 3zzx_A Thioredoxin; oxidoreduc 97.3 0.00074 2.5E-08 52.1 7.5 80 41-145 20-103 (105)
88 1u6t_A SH3 domain-binding glut 97.3 0.00048 1.6E-08 56.0 6.6 64 45-134 1-78 (121)
89 3d22_A TRXH4, thioredoxin H-ty 97.3 0.00025 8.5E-09 55.7 4.8 83 40-147 45-131 (139)
90 3uvt_A Thioredoxin domain-cont 97.3 0.0012 4.1E-08 49.0 8.4 84 41-145 21-109 (111)
91 2oe3_A Thioredoxin-3; electron 97.3 0.00055 1.9E-08 52.7 6.6 81 40-145 29-113 (114)
92 2l5o_A Putative thioredoxin; s 97.3 0.00049 1.7E-08 54.2 6.4 100 40-148 27-141 (153)
93 1t3b_A Thiol:disulfide interch 97.2 0.00038 1.3E-08 60.0 6.0 98 42-146 86-209 (211)
94 1mek_A Protein disulfide isome 97.2 0.0015 5.1E-08 48.9 8.6 88 40-148 23-117 (120)
95 3cxg_A Putative thioredoxin; m 97.2 0.00039 1.3E-08 55.1 5.6 79 44-147 42-128 (133)
96 2wz9_A Glutaredoxin-3; protein 97.2 0.00066 2.2E-08 54.8 7.0 84 41-149 32-119 (153)
97 3f3q_A Thioredoxin-1; His TAG, 97.2 0.00067 2.3E-08 51.5 6.6 80 41-145 24-107 (109)
98 2yan_A Glutaredoxin-3; oxidore 97.2 0.0004 1.4E-08 53.3 5.2 69 46-142 19-92 (105)
99 2e7p_A Glutaredoxin; thioredox 97.2 0.00059 2E-08 52.0 6.0 66 42-131 20-85 (116)
100 2ppt_A Thioredoxin-2; thiredox 97.2 0.00047 1.6E-08 56.4 5.5 84 40-147 63-151 (155)
101 1r26_A Thioredoxin; redox-acti 97.2 0.00069 2.4E-08 53.3 6.2 83 39-146 35-121 (125)
102 1eej_A Thiol:disulfide interch 97.2 0.00061 2.1E-08 58.8 6.3 99 42-146 86-209 (216)
103 2vlu_A Thioredoxin, thioredoxi 97.1 0.00094 3.2E-08 50.9 6.7 82 40-146 33-118 (122)
104 3tco_A Thioredoxin (TRXA-1); d 97.1 0.001 3.4E-08 49.1 6.7 82 41-146 21-107 (109)
105 1gh2_A Thioredoxin-like protei 97.1 0.0011 3.7E-08 49.6 6.9 80 41-145 21-104 (107)
106 1v58_A Thiol:disulfide interch 97.1 0.00054 1.9E-08 60.3 5.9 100 41-147 96-232 (241)
107 2dml_A Protein disulfide-isome 97.1 0.0028 9.7E-08 48.7 9.2 82 41-146 35-122 (130)
108 2f9s_A Thiol-disulfide oxidore 97.1 0.00089 3E-08 52.9 6.4 101 40-149 25-139 (151)
109 1v98_A Thioredoxin; oxidoreduc 97.1 0.0013 4.6E-08 51.7 7.3 79 45-146 53-136 (140)
110 2l5l_A Thioredoxin; structural 97.1 0.00078 2.7E-08 53.1 5.9 85 41-149 38-127 (136)
111 2lja_A Putative thiol-disulfid 97.1 0.002 7E-08 50.5 8.2 100 40-147 29-142 (152)
112 3or5_A Thiol:disulfide interch 97.1 0.0017 5.7E-08 51.6 7.8 90 40-148 33-151 (165)
113 3gv1_A Disulfide interchange p 97.0 0.0011 3.6E-08 54.8 6.1 100 41-149 13-140 (147)
114 3gl3_A Putative thiol:disulfid 97.0 0.0026 8.8E-08 50.0 8.1 101 40-149 27-143 (152)
115 2ht9_A Glutaredoxin-2; thiored 97.0 0.0014 4.6E-08 54.1 6.5 63 46-130 51-113 (146)
116 3hcz_A Possible thiol-disulfid 96.9 0.0046 1.6E-07 47.9 9.1 44 40-86 30-73 (148)
117 4evm_A Thioredoxin family prot 96.9 0.0019 6.5E-08 48.8 6.6 97 40-145 21-136 (138)
118 3eyt_A Uncharacterized protein 96.9 0.0015 5.1E-08 51.8 6.2 101 41-150 28-154 (158)
119 2o8v_B Thioredoxin 1; disulfid 96.9 0.00063 2.1E-08 53.5 3.9 81 41-145 40-125 (128)
120 3kcm_A Thioredoxin family prot 96.9 0.0022 7.6E-08 50.4 6.8 100 40-148 27-143 (154)
121 1a8l_A Protein disulfide oxido 96.9 0.01 3.4E-07 50.1 11.2 84 40-145 20-110 (226)
122 2wci_A Glutaredoxin-4; redox-a 96.8 0.0013 4.3E-08 53.9 5.1 63 46-134 37-104 (135)
123 3hz4_A Thioredoxin; NYSGXRC, P 96.8 0.0019 6.4E-08 51.2 5.9 83 41-147 24-111 (140)
124 2yj7_A LPBCA thioredoxin; oxid 95.8 0.00019 6.6E-09 52.5 0.0 66 41-130 19-86 (106)
125 1a8l_A Protein disulfide oxido 96.8 0.0036 1.2E-07 52.9 7.9 86 40-145 132-223 (226)
126 2f51_A Thioredoxin; electron t 96.8 0.0026 8.9E-08 49.0 6.4 82 41-147 23-112 (118)
127 3ewl_A Uncharacterized conserv 96.7 0.0022 7.5E-08 49.9 5.6 98 40-146 26-139 (142)
128 3raz_A Thioredoxin-related pro 96.7 0.0093 3.2E-07 47.1 9.1 105 40-148 23-140 (151)
129 2lst_A Thioredoxin; structural 95.7 0.00028 9.7E-09 54.6 0.0 86 40-147 18-115 (130)
130 3zyw_A Glutaredoxin-3; metal b 96.6 0.0016 5.5E-08 51.1 4.2 70 46-143 18-92 (111)
131 1x5e_A Thioredoxin domain cont 96.6 0.0031 1.1E-07 48.5 5.8 82 45-148 25-110 (126)
132 2fwh_A Thiol:disulfide interch 96.6 0.0059 2E-07 47.9 7.5 86 41-147 31-127 (134)
133 4fo5_A Thioredoxin-like protei 96.6 0.0071 2.4E-07 47.3 7.6 97 41-144 32-141 (143)
134 1wou_A Thioredoxin -related pr 96.5 0.0039 1.3E-07 48.4 5.8 88 41-145 24-122 (123)
135 3ipz_A Monothiol glutaredoxin- 96.5 0.0034 1.2E-07 48.8 5.4 63 46-134 20-87 (109)
136 2qgv_A Hydrogenase-1 operon pr 96.5 0.011 3.6E-07 49.1 8.6 87 40-148 33-125 (140)
137 1wmj_A Thioredoxin H-type; str 96.5 0.00038 1.3E-08 53.5 -0.2 84 41-149 36-123 (130)
138 2kuc_A Putative disulphide-iso 96.5 0.0021 7.3E-08 49.5 4.1 88 40-149 26-122 (130)
139 3kp8_A Vkorc1/thioredoxin doma 96.5 0.0024 8.2E-08 49.3 4.2 78 43-144 14-91 (106)
140 3hdc_A Thioredoxin family prot 96.5 0.0036 1.2E-07 50.0 5.4 81 40-126 40-123 (158)
141 3erw_A Sporulation thiol-disul 96.5 0.0022 7.4E-08 49.5 3.9 45 40-87 33-77 (145)
142 3gx8_A Monothiol glutaredoxin- 96.4 0.0045 1.5E-07 49.3 5.8 66 46-134 18-88 (121)
143 3bci_A Disulfide bond protein 96.4 0.0044 1.5E-07 51.4 5.9 41 105-147 137-177 (186)
144 1kng_A Thiol:disulfide interch 96.4 0.0072 2.5E-07 47.4 6.8 94 41-145 42-149 (156)
145 1zma_A Bacterocin transport ac 96.3 0.011 3.7E-07 45.0 7.1 83 41-143 29-116 (118)
146 2ju5_A Thioredoxin disulfide i 96.3 0.0048 1.6E-07 49.9 5.3 95 40-146 46-150 (154)
147 2lrt_A Uncharacterized protein 96.3 0.0079 2.7E-07 48.1 6.3 43 41-86 35-77 (152)
148 3eur_A Uncharacterized protein 96.3 0.0046 1.6E-07 48.4 4.8 43 41-86 31-76 (142)
149 1x5d_A Protein disulfide-isome 96.3 0.0076 2.6E-07 46.2 6.0 86 41-147 25-116 (133)
150 3ia1_A THIO-disulfide isomeras 96.3 0.0048 1.6E-07 48.6 5.0 99 42-149 31-145 (154)
151 3emx_A Thioredoxin; structural 96.3 0.016 5.4E-07 45.6 7.9 89 44-148 33-126 (135)
152 1oaz_A Thioredoxin 1; immune s 96.2 0.0094 3.2E-07 46.4 6.5 82 41-146 21-121 (123)
153 2jad_A Yellow fluorescent prot 96.2 0.0036 1.2E-07 59.5 4.6 70 45-134 262-332 (362)
154 2dj3_A Protein disulfide-isome 96.2 0.0096 3.3E-07 45.9 6.3 87 41-149 25-119 (133)
155 3c7m_A Thiol:disulfide interch 96.2 0.003 1E-07 52.2 3.4 42 42-87 18-60 (195)
156 2wem_A Glutaredoxin-related pr 96.1 0.0054 1.9E-07 48.9 4.4 63 46-134 22-90 (118)
157 3aps_A DNAJ homolog subfamily 96.0 0.0076 2.6E-07 45.7 4.7 83 41-147 21-112 (122)
158 2cvb_A Probable thiol-disulfid 96.0 0.0034 1.2E-07 51.6 2.8 98 41-148 33-159 (188)
159 3fw2_A Thiol-disulfide oxidore 95.9 0.036 1.2E-06 43.5 8.7 97 41-145 33-145 (150)
160 3gn3_A Putative protein-disulf 95.9 0.013 4.3E-07 49.7 6.3 30 41-70 13-42 (182)
161 3idv_A Protein disulfide-isome 95.9 0.016 5.5E-07 48.9 7.0 87 40-147 31-121 (241)
162 1nm3_A Protein HI0572; hybrid, 95.9 0.0094 3.2E-07 51.5 5.6 64 43-133 169-232 (241)
163 1jfu_A Thiol:disulfide interch 95.9 0.019 6.5E-07 46.9 7.1 43 41-86 60-102 (186)
164 3s9f_A Tryparedoxin; thioredox 95.9 0.015 5.3E-07 47.3 6.4 79 41-126 48-136 (165)
165 3gha_A Disulfide bond formatio 95.9 0.045 1.5E-06 46.7 9.5 41 105-147 151-191 (202)
166 3apq_A DNAJ homolog subfamily 95.8 0.0088 3E-07 50.6 4.8 86 39-148 112-202 (210)
167 2djj_A PDI, protein disulfide- 95.8 0.055 1.9E-06 40.7 8.8 85 40-148 24-117 (121)
168 3gmf_A Protein-disulfide isome 95.8 0.0065 2.2E-07 52.5 3.8 42 105-148 155-197 (205)
169 3gix_A Thioredoxin-like protei 95.8 0.029 9.9E-07 45.3 7.5 82 41-146 23-119 (149)
170 3qou_A Protein YBBN; thioredox 95.8 0.018 6.3E-07 50.5 6.8 83 41-147 26-113 (287)
171 3lwa_A Secreted thiol-disulfid 95.8 0.028 9.7E-07 45.8 7.5 91 41-145 59-178 (183)
172 3dxb_A Thioredoxin N-terminall 95.7 0.034 1.2E-06 47.5 8.2 87 40-150 29-120 (222)
173 2k6v_A Putative cytochrome C o 95.7 0.1 3.6E-06 41.4 10.5 46 41-87 35-82 (172)
174 2ywi_A Hypothetical conserved 95.6 0.0062 2.1E-07 50.1 3.1 96 43-147 48-173 (196)
175 2b1k_A Thiol:disulfide interch 95.6 0.048 1.6E-06 43.5 8.4 96 40-145 50-157 (168)
176 3q6o_A Sulfhydryl oxidase 1; p 95.6 0.025 8.7E-07 48.7 7.1 87 42-147 31-126 (244)
177 3fk8_A Disulphide isomerase; A 95.6 0.0077 2.6E-07 46.6 3.4 70 40-130 28-105 (133)
178 1xzo_A BSSCO, hypothetical pro 95.6 0.017 5.9E-07 46.3 5.6 45 41-86 33-78 (174)
179 2kok_A Arsenate reductase; bru 95.6 0.015 5.1E-07 46.0 5.0 91 45-143 6-118 (120)
180 2av4_A Thioredoxin-like protei 95.6 0.018 6E-07 49.0 5.7 81 44-147 43-138 (160)
181 1xvq_A Thiol peroxidase; thior 95.5 0.016 5.6E-07 47.5 5.3 84 40-131 43-143 (175)
182 2es7_A Q8ZP25_salty, putative 95.5 0.022 7.4E-07 46.3 5.9 83 42-149 35-126 (142)
183 3l9v_A Putative thiol-disulfid 95.5 0.013 4.5E-07 49.2 4.7 42 42-87 15-59 (189)
184 2bmx_A Alkyl hydroperoxidase C 95.5 0.013 4.5E-07 48.8 4.5 44 41-86 45-88 (195)
185 3kij_A Probable glutathione pe 95.3 0.064 2.2E-06 43.9 8.3 66 41-116 38-104 (180)
186 1o73_A Tryparedoxin; electron 95.3 0.042 1.5E-06 42.5 6.7 81 40-126 27-116 (144)
187 1i5g_A Tryparedoxin II; electr 95.2 0.045 1.5E-06 42.6 6.8 81 40-126 27-116 (144)
188 1rw1_A Conserved hypothetical 95.1 0.018 6.2E-07 45.1 4.0 23 46-68 2-24 (114)
189 2dj0_A Thioredoxin-related tra 95.0 0.023 7.9E-07 44.4 4.5 66 44-129 28-99 (137)
190 3kp9_A Vkorc1/thioredoxin doma 95.0 0.014 4.7E-07 53.8 3.5 76 46-144 201-276 (291)
191 3u5r_E Uncharacterized protein 95.0 0.012 4.2E-07 50.2 3.0 100 41-148 58-187 (218)
192 1o8x_A Tryparedoxin, TRYX, TXN 95.0 0.059 2E-06 42.1 6.8 79 41-126 28-116 (146)
193 3idv_A Protein disulfide-isome 94.9 0.043 1.5E-06 46.2 6.2 84 44-147 149-236 (241)
194 3drn_A Peroxiredoxin, bacterio 94.9 0.017 5.7E-07 46.5 3.3 42 43-86 31-72 (161)
195 2p5q_A Glutathione peroxidase 94.9 0.15 5E-06 40.4 8.9 45 40-87 31-75 (170)
196 3kh7_A Thiol:disulfide interch 94.8 0.1 3.5E-06 42.7 8.1 93 41-145 58-164 (176)
197 1qgv_A Spliceosomal protein U5 94.8 0.046 1.6E-06 43.7 5.8 66 41-130 23-90 (142)
198 2hyx_A Protein DIPZ; thioredox 94.7 0.059 2E-06 50.5 7.1 97 41-146 82-197 (352)
199 2qsi_A Putative hydrogenase ex 94.7 0.26 8.8E-06 40.5 10.0 83 44-147 35-122 (137)
200 3cmi_A Peroxiredoxin HYR1; thi 94.6 0.21 7.2E-06 40.2 9.4 43 40-86 31-73 (171)
201 2x8g_A Thioredoxin glutathione 94.6 0.02 6.8E-07 56.1 3.8 64 45-130 19-82 (598)
202 1we0_A Alkyl hydroperoxide red 94.6 0.011 3.7E-07 48.8 1.6 44 41-86 31-74 (187)
203 1xvw_A Hypothetical protein RV 94.6 0.075 2.6E-06 42.0 6.5 58 42-116 37-94 (160)
204 2jsy_A Probable thiol peroxida 94.6 0.031 1.1E-06 44.8 4.2 43 40-86 43-85 (167)
205 3ed3_A Protein disulfide-isome 94.5 0.074 2.5E-06 48.0 7.1 86 41-148 35-142 (298)
206 1uul_A Tryparedoxin peroxidase 94.3 0.059 2E-06 45.1 5.6 103 41-146 36-163 (202)
207 2h01_A 2-Cys peroxiredoxin; th 94.2 0.036 1.2E-06 45.9 4.0 44 41-86 31-74 (192)
208 1z3e_A Regulatory protein SPX; 94.0 0.032 1.1E-06 44.8 3.1 24 46-69 3-26 (132)
209 1qmv_A Human thioredoxin perox 93.9 0.081 2.8E-06 44.0 5.6 104 41-146 34-161 (197)
210 2p31_A CL683, glutathione pero 93.8 0.33 1.1E-05 39.7 9.1 44 41-87 49-92 (181)
211 3h79_A Thioredoxin-like protei 93.8 0.42 1.5E-05 36.4 9.2 83 41-144 33-124 (127)
212 2lus_A Thioredoxion; CR-Trp16, 92.8 0.012 4E-07 45.5 0.0 43 43-86 28-70 (143)
213 3f4s_A Alpha-DSBA1, putative u 93.7 0.11 3.6E-06 45.5 6.1 104 42-148 39-211 (226)
214 2i81_A 2-Cys peroxiredoxin; st 93.5 0.069 2.4E-06 45.7 4.5 105 40-146 51-178 (213)
215 2yzh_A Probable thiol peroxida 93.4 0.12 4.2E-06 41.7 5.7 57 41-116 47-103 (171)
216 3t58_A Sulfhydryl oxidase 1; o 93.3 0.24 8.2E-06 48.6 8.7 88 41-147 30-126 (519)
217 2ywm_A Glutaredoxin-like prote 93.3 0.083 2.8E-06 44.6 4.7 68 39-126 18-88 (229)
218 3dwv_A Glutathione peroxidase- 93.3 0.46 1.6E-05 39.1 9.1 43 41-86 46-88 (187)
219 1psq_A Probable thiol peroxida 93.2 0.13 4.6E-06 41.3 5.6 58 40-116 41-98 (163)
220 3ztl_A Thioredoxin peroxidase; 93.2 0.019 6.5E-07 49.4 0.6 45 40-86 68-112 (222)
221 1zof_A Alkyl hydroperoxide-red 93.1 0.053 1.8E-06 45.1 3.1 44 41-86 33-76 (198)
222 2wul_A Glutaredoxin related pr 93.0 0.15 5.1E-06 40.9 5.5 28 104-134 63-90 (118)
223 1zye_A Thioredoxin-dependent p 93.0 0.099 3.4E-06 44.8 4.7 45 41-87 56-100 (220)
224 2trc_P Phosducin, MEKA, PP33; 92.9 0.11 3.8E-06 45.0 5.0 79 42-146 121-211 (217)
225 3gkn_A Bacterioferritin comigr 92.7 0.066 2.3E-06 42.6 3.0 60 40-116 34-93 (163)
226 2ls5_A Uncharacterized protein 91.9 0.021 7.1E-07 45.3 0.0 44 41-86 33-77 (159)
227 2vup_A Glutathione peroxidase- 92.6 0.27 9.3E-06 40.5 6.8 44 40-86 47-90 (190)
228 3iv4_A Putative oxidoreductase 92.5 0.12 4.2E-06 41.2 4.3 66 43-131 25-95 (112)
229 2b5e_A Protein disulfide-isome 92.4 0.28 9.7E-06 46.6 7.6 87 39-148 29-122 (504)
230 3zrd_A Thiol peroxidase; oxido 92.3 0.28 9.6E-06 41.4 6.6 43 40-86 77-119 (200)
231 2dlx_A UBX domain-containing p 92.2 0.22 7.6E-06 41.1 5.8 85 37-146 38-134 (153)
232 2v1m_A Glutathione peroxidase; 92.2 0.55 1.9E-05 37.0 7.9 67 40-116 30-97 (169)
233 1z6n_A Hypothetical protein PA 92.2 0.13 4.5E-06 42.9 4.3 41 42-86 54-94 (167)
234 3l9s_A Thiol:disulfide interch 92.2 0.099 3.4E-06 44.1 3.6 41 43-87 23-66 (191)
235 3ga4_A Dolichyl-diphosphooligo 92.1 0.12 4.2E-06 44.1 4.1 62 44-125 39-109 (178)
236 2pn8_A Peroxiredoxin-4; thiore 92.0 0.23 7.9E-06 42.3 5.8 103 41-145 48-174 (211)
237 3p7x_A Probable thiol peroxida 91.5 0.23 8E-06 39.9 5.0 57 40-116 45-101 (166)
238 2a4v_A Peroxiredoxin DOT5; yea 91.4 0.14 4.8E-06 40.8 3.5 56 43-116 37-92 (159)
239 3ixr_A Bacterioferritin comigr 91.2 0.19 6.4E-06 41.4 4.2 60 40-116 50-109 (179)
240 3qcp_A QSOX from trypanosoma b 90.9 0.4 1.4E-05 46.8 6.9 63 42-125 43-110 (470)
241 3apo_A DNAJ homolog subfamily 90.9 0.16 5.4E-06 51.2 4.1 86 40-149 674-768 (780)
242 1n8j_A AHPC, alkyl hydroperoxi 90.7 0.19 6.6E-06 41.6 3.8 56 41-113 30-85 (186)
243 1sen_A Thioredoxin-like protei 90.5 0.041 1.4E-06 45.0 -0.5 31 38-69 43-73 (164)
244 2gs3_A PHGPX, GPX-4, phospholi 90.4 0.64 2.2E-05 38.0 6.8 64 41-116 49-114 (185)
245 2ggt_A SCO1 protein homolog, m 90.4 0.37 1.3E-05 37.8 5.1 64 41-116 23-89 (164)
246 4hde_A SCO1/SENC family lipopr 90.4 0.27 9.2E-06 40.3 4.4 66 40-117 31-97 (170)
247 3me7_A Putative uncharacterize 90.2 0.88 3E-05 36.9 7.4 64 41-117 28-92 (170)
248 2dbc_A PDCL2, unnamed protein 90.1 0.25 8.5E-06 38.8 3.8 77 42-146 31-119 (135)
249 2r2j_A Thioredoxin domain-cont 89.8 0.51 1.7E-05 43.5 6.3 88 40-148 21-117 (382)
250 3feu_A Putative lipoprotein; a 89.5 0.32 1.1E-05 40.6 4.2 40 105-146 140-182 (185)
251 2qc7_A ERP31, ERP28, endoplasm 89.1 1.9 6.5E-05 38.0 9.2 88 40-146 21-117 (240)
252 2rli_A SCO2 protein homolog, m 89.0 0.6 2.1E-05 36.9 5.4 63 41-115 26-91 (171)
253 3evi_A Phosducin-like protein 88.9 0.16 5.5E-06 39.9 1.9 60 43-130 25-86 (118)
254 3f9u_A Putative exported cytoc 88.6 0.33 1.1E-05 39.0 3.6 101 39-145 45-163 (172)
255 1a0r_P Phosducin, MEKA, PP33; 88.0 0.28 9.6E-06 43.6 3.0 81 41-147 133-225 (245)
256 1q98_A Thiol peroxidase, TPX; 87.9 0.6 2E-05 37.5 4.7 43 40-86 42-84 (165)
257 2obi_A PHGPX, GPX-4, phospholi 87.8 1.1 3.7E-05 36.4 6.3 64 41-116 47-112 (183)
258 4g2e_A Peroxiredoxin; redox pr 87.5 0.39 1.4E-05 38.6 3.4 60 40-116 29-88 (157)
259 1un2_A DSBA, thiol-disulfide i 87.3 0.32 1.1E-05 41.4 2.9 41 42-86 114-157 (197)
260 3dml_A Putative uncharacterize 87.3 0.18 6.3E-06 40.1 1.2 83 43-145 20-107 (116)
261 2c0d_A Thioredoxin peroxidase 87.2 0.93 3.2E-05 39.0 5.8 45 40-86 55-99 (221)
262 3f8u_A Protein disulfide-isome 87.2 0.76 2.6E-05 43.2 5.7 83 42-148 22-109 (481)
263 2djk_A PDI, protein disulfide- 86.8 0.85 2.9E-05 35.5 4.9 84 40-146 22-113 (133)
264 3uem_A Protein disulfide-isome 86.2 1.5 5E-05 39.5 6.8 82 41-146 267-355 (361)
265 1prx_A HORF6; peroxiredoxin, h 85.2 0.7 2.4E-05 39.9 4.0 106 39-146 29-167 (224)
266 2imf_A HCCA isomerase, 2-hydro 83.6 1.3 4.5E-05 36.9 4.9 38 106-146 156-194 (203)
267 3a2v_A Probable peroxiredoxin; 82.1 0.36 1.2E-05 42.9 0.8 105 40-146 32-160 (249)
268 3f8u_A Protein disulfide-isome 81.8 1.3 4.4E-05 41.6 4.6 85 41-148 370-461 (481)
269 2hls_A Protein disulfide oxido 80.5 3.9 0.00013 35.3 6.9 85 40-144 24-113 (243)
270 3feu_A Putative lipoprotein; a 80.3 0.29 1E-05 40.8 -0.4 40 41-86 22-61 (185)
271 1tp9_A Peroxiredoxin, PRX D (t 80.2 0.6 2E-05 37.5 1.4 60 40-116 34-95 (162)
272 2b5e_A Protein disulfide-isome 80.1 0.74 2.5E-05 43.7 2.3 85 41-148 376-467 (504)
273 2b7k_A SCO1 protein; metalloch 79.2 1.6 5.6E-05 36.2 3.9 46 41-87 41-88 (200)
274 2f8a_A Glutathione peroxidase 79.1 1.6 5.4E-05 36.9 3.9 59 41-111 47-107 (208)
275 3qpm_A Peroxiredoxin; oxidored 78.5 1.2 4.1E-05 38.8 3.0 45 40-86 76-120 (240)
276 3fz5_A Possible 2-hydroxychrom 78.5 2.7 9.1E-05 35.2 5.1 37 106-145 162-199 (202)
277 3gl5_A Putative DSBA oxidoredu 78.5 2.6 8.8E-05 36.7 5.1 43 104-148 170-213 (239)
278 2wfc_A Peroxiredoxin 5, PRDX5; 78.1 1.4 4.8E-05 35.9 3.1 60 40-116 30-91 (167)
279 1xcc_A 1-Cys peroxiredoxin; un 77.6 0.61 2.1E-05 40.1 0.8 105 40-146 30-164 (220)
280 1xg8_A Hypothetical protein SA 77.3 19 0.00066 28.5 9.2 79 43-135 7-95 (111)
281 2in3_A Hypothetical protein; D 76.3 4.3 0.00015 33.6 5.7 27 43-69 7-33 (216)
282 3tjj_A Peroxiredoxin-4; thiore 74.3 2.4 8.1E-05 37.4 3.7 44 41-86 91-134 (254)
283 3l78_A Regulatory protein SPX; 74.1 1 3.5E-05 35.4 1.2 23 46-68 2-24 (120)
284 2c0g_A ERP29 homolog, windbeut 73.6 4 0.00014 36.2 5.1 90 39-147 31-131 (248)
285 2r37_A Glutathione peroxidase 73.4 5.8 0.0002 33.6 5.9 58 44-111 40-97 (207)
286 1sji_A Calsequestrin 2, calseq 73.0 9.9 0.00034 34.1 7.7 84 41-148 28-122 (350)
287 3ph9_A Anterior gradient prote 72.8 1.3 4.3E-05 36.3 1.5 29 38-67 41-69 (151)
288 3apo_A DNAJ homolog subfamily 72.6 4.5 0.00015 40.5 5.7 85 40-148 132-221 (780)
289 3ira_A Conserved protein; meth 72.5 1.8 6.2E-05 36.3 2.4 80 36-132 34-120 (173)
290 3uem_A Protein disulfide-isome 72.1 11 0.00036 33.8 7.6 85 44-147 137-229 (361)
291 1r4w_A Glutathione S-transfera 71.9 6.7 0.00023 33.2 5.9 27 44-70 6-32 (226)
292 3gkx_A Putative ARSC family re 71.1 1.1 3.7E-05 35.4 0.6 23 46-68 6-28 (120)
293 4gqc_A Thiol peroxidase, perox 70.3 0.69 2.4E-05 37.6 -0.7 60 40-116 32-91 (164)
294 1s3c_A Arsenate reductase; ARS 70.0 1.2 4E-05 36.3 0.7 24 46-69 4-27 (141)
295 3fz4_A Putative arsenate reduc 69.0 1.6 5.3E-05 34.5 1.2 25 45-69 4-28 (120)
296 2i3y_A Epididymal secretory gl 68.3 5.9 0.0002 33.9 4.8 40 44-86 58-97 (215)
297 3rpp_A Glutathione S-transfera 68.0 9.9 0.00034 32.7 6.2 42 107-150 172-217 (234)
298 3uma_A Hypothetical peroxiredo 67.9 3.5 0.00012 34.4 3.2 60 40-116 55-116 (184)
299 2v2g_A Peroxiredoxin 6; oxidor 67.8 0.6 2E-05 40.9 -1.7 46 40-87 28-73 (233)
300 3f0i_A Arsenate reductase; str 66.7 1.5 5.2E-05 34.5 0.7 23 46-68 6-28 (119)
301 3rdw_A Putative arsenate reduc 66.3 1.4 4.8E-05 34.8 0.3 23 46-68 7-29 (121)
302 1nm3_A Protein HI0572; hybrid, 64.7 3.6 0.00012 34.9 2.7 60 40-116 32-93 (241)
303 2pwj_A Mitochondrial peroxired 63.4 6.2 0.00021 32.0 3.8 58 41-115 43-102 (171)
304 3us3_A Calsequestrin-1; calciu 58.1 50 0.0017 29.9 9.4 86 39-147 28-123 (367)
305 3keb_A Probable thiol peroxida 54.7 24 0.00081 30.8 6.2 28 40-67 47-79 (224)
306 1un2_A DSBA, thiol-disulfide i 48.8 18 0.0006 30.4 4.3 26 105-132 38-63 (197)
307 3kzq_A Putative uncharacterize 48.3 18 0.00062 29.9 4.3 28 44-71 3-30 (208)
308 3mng_A Peroxiredoxin-5, mitoch 43.5 13 0.00043 30.6 2.5 60 40-116 42-103 (173)
309 2r4v_A XAP121, chloride intrac 37.6 51 0.0017 27.7 5.6 74 45-147 13-94 (247)
310 3h7h_A Transcription elongatio 35.8 11 0.00036 30.5 0.8 69 47-146 29-107 (120)
311 2ahe_A Chloride intracellular 32.0 56 0.0019 28.1 5.0 74 45-147 18-99 (267)
312 3vk9_A Glutathione S-transfera 31.4 50 0.0017 26.9 4.4 74 46-145 3-76 (216)
313 4hoj_A REGF protein; GST, glut 29.5 79 0.0027 25.5 5.2 74 44-146 2-75 (210)
314 3ppu_A Glutathione-S-transfera 28.1 1.4E+02 0.0048 27.3 7.2 99 36-147 71-185 (352)
315 1axd_A Glutathione S-transfera 27.9 2.1E+02 0.0072 22.5 7.6 75 46-146 3-77 (209)
316 1v2a_A Glutathione transferase 26.7 78 0.0027 25.4 4.7 74 46-146 1-74 (210)
317 3f6d_A Adgstd4-4, glutathione 25.8 48 0.0016 26.8 3.2 75 46-146 1-76 (219)
318 1pn9_A GST class-delta, glutat 24.8 72 0.0025 25.6 4.2 75 46-146 1-75 (209)
319 3ir4_A Glutaredoxin 2; glutath 24.0 76 0.0026 25.6 4.2 72 46-147 4-76 (218)
320 4iel_A Glutathione S-transfera 24.0 67 0.0023 26.3 3.9 76 45-146 23-98 (229)
321 3kgk_A Arsenical resistance op 23.4 85 0.0029 24.7 4.1 36 107-144 62-99 (110)
322 3ktb_A Arsenical resistance op 22.0 82 0.0028 24.6 3.7 34 107-142 65-100 (106)
323 1dxs_A P53-like transcription 20.9 22 0.00076 26.7 0.2 13 46-58 10-22 (80)
324 3bby_A Uncharacterized GST-lik 20.8 1.4E+02 0.0047 23.9 5.1 75 46-146 7-83 (215)
325 4f9z_D Endoplasmic reticulum r 20.3 2.2E+02 0.0076 23.4 6.5 67 41-126 130-196 (227)
326 2in3_A Hypothetical protein; D 20.3 36 0.0012 27.8 1.4 24 44-67 11-34 (216)
327 4adn_A FAR1; antibiotic resist 20.1 14 0.00046 32.8 -1.4 10 89-98 127-136 (222)
No 1
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=100.00 E-value=1.9e-54 Score=398.14 Aligned_cols=215 Identities=26% Similarity=0.428 Sum_probs=176.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++.++||||||+|||+||+|+++|++++.+ .+||+|+|||+|||||||+|||++++|++||+.|.+.+|.++|||
T Consensus 41 ~~~~~VelyTs~gCp~C~~Ak~lL~~~~~~-----~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyT 115 (270)
T 2axo_A 41 AVKGVVELFTSQGCASCPPADEALRKMIQK-----GDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYT 115 (270)
T ss_dssp CCCCEEEEEECTTCTTCHHHHHHHHHHHHH-----TSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCS
T ss_pred CCCcEEEEEeCCCCCChHHHHHHHHHhhcc-----CCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccC
Confidence 445999999999999999999999999874 489999999999999999999999999999999999999999999
Q ss_pred ceEEEcCeEeccCCChhhHHHHHHcCCCCCC-CceeEEEeeecCCCceEEEEEecccccccCCCCeEEEEEEEeCCeeee
Q 023845 121 PQLVFQGRVQCQGNDQDGMLSAIANAPKFPA-PSFQATFERLTSGSESLQVSLTGSLRSKVDNQGANIMVALYESGLVTN 199 (276)
Q Consensus 121 Pq~vVnG~~~~~g~~~~~~~~~i~~~~~~~~-~~i~l~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~l~l~l~e~~~~~~ 199 (276)
||++|||+.+++|.+++.+.++|.+..+.++ ..+++++++ + +++++|+++... ..++|+|++|+++++++
T Consensus 116 PqI~Ing~~~v~G~d~~~l~~~l~~~~~~~~~~~v~l~~~~-~--~~~l~v~~~~~~------~~~~v~lv~~e~~~~~~ 186 (270)
T 2axo_A 116 PQAILNGRDHVKGADVRGIYDRLDAFKREGQGLNVPVSSKF-A--GDEVEIDIGAGN------GKADVVVAYFTREQTVD 186 (270)
T ss_dssp SEEEETTTEEEETTCHHHHHHHHHHHHHTTCSCCSCEEEEE-C--SSSEEEEECCCS------SCEEEEEEEEEEEEEEE
T ss_pred CEEEECCEEeecCCCHHHHHHHHHHhhcccCCCceEEEEEe-c--CCEEEEEEccCC------CceEEEEEEEcCCceee
Confidence 9999999999999999999999987765554 356777654 2 378888875421 26899999999999999
Q ss_pred cCCCCCCCeeeeeceeeeeeeeccccccCCCCccceeeEeeecCCCcCCCCceEEEEEEcC----C-CceeEEeeccCCC
Q 023845 200 CPAGENKGRVLSNDYVVRKLEKLCTVKDISPKKHVSGTVTFPLWEGFNSGKCGVAVFVQNN----S-HHIFGSQNFQLPD 274 (276)
Q Consensus 200 V~~GEN~Gr~L~h~~VVR~~~~~g~~g~w~~~~~~~~~~~~~l~~~~~~~~~~vVvfVQ~~----~-G~ILgAa~~~lp~ 274 (276)
|++|||+||+|+|+||||+|+++| +|+++. .++++|.+...+++++++|+|||++ + |+||||+++++.+
T Consensus 187 i~rGEN~Gr~l~h~nVVr~~~~~g---~w~g~~---~~~~lp~~~~~~~~~~~~vv~vq~~~~~~~~G~Il~Aa~~~~~~ 260 (270)
T 2axo_A 187 VQKGENQGKKMSYWHSVYDVQTVG---MWDGSP---MTVKLPASVVAKVKKGGCAVLLQTANASGDPAAIVGASILLGNE 260 (270)
T ss_dssp C-------CEEEEEEEEEEEEEEE---EECSSC---EEEEECHHHHHHHTTEEEEEEEEEECTTCCEEEEEEEEEEESCC
T ss_pred ccCCCCCCcEEEeeeeEEeeeecc---CCCCCC---EEEEccccccccCCCccEEEEEEcCCCCCCCCcEeeeEeccccc
Confidence 999999999999999999999875 566652 2445544332367889999999987 5 9999999999887
Q ss_pred C
Q 023845 275 N 275 (276)
Q Consensus 275 ~ 275 (276)
+
T Consensus 261 ~ 261 (270)
T 2axo_A 261 T 261 (270)
T ss_dssp C
T ss_pred c
Confidence 5
No 2
>2r2c_A 28 kDa outer membrane protein OMP28; lipoprotein, structural genomics, PSI, MCSG, protein initiative; 1.80A {Porphyromonas gingivalis}
Probab=99.89 E-value=2.4e-24 Score=187.40 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=84.0
Q ss_pred cHHHHHHHHHhCCCCCCcceEEEcCeEeccCC----ChhhHHHHHHcCCCCCCC-ceeEEEeeecCCCceEEEEEecccc
Q 023845 103 TVRQKAYVEALNLDTMFTPQLVFQGRVQCQGN----DQDGMLSAIANAPKFPAP-SFQATFERLTSGSESLQVSLTGSLR 177 (276)
Q Consensus 103 t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~----~~~~~~~~i~~~~~~~~~-~i~l~~~~~~~~~~~l~v~~~~~~~ 177 (276)
|+-.++|+++|+..+ |+|+++||++....+. +...|...|.+.+++++. .|.|+.+.. .+++++|+++....
T Consensus 2 ~~~g~~y~~~~~~~g-~~P~~~vNR~~~~~~~~~~~~~~~~~~~i~~~l~~~a~~~I~l~a~~~--~~~~i~v~~~~~~~ 78 (183)
T 2r2c_A 2 TEAGDAYYSKFANNT-PLPALMVSRKKFGSSYVYDKSYKTWDVPIAEQMEQKAKINIFAVAEYT--DTQKIKVTVKGKIL 78 (183)
T ss_dssp -----------------------------------CEECBCCCCCC-------CEEEEEEEEEE--ETTEEEEEEEEEEC
T ss_pred CchHHHHHHHHCCCC-CCCEEEEeCCccccccccccchhHHHHHHHHHHccCCCceEEEEEEec--CCCeEEEEEEEEEe
Confidence 455689999999987 9999999999877654 236677777777766663 566666552 23667776665422
Q ss_pred cccCCCCeEEEEEEEeCCeee-ecCCCCCCCeeeeeceeeeeeeecccccc---CCCCccceeeEeeecCCCcCCCCceE
Q 023845 178 SKVDNQGANIMVALYESGLVT-NCPAGENKGRVLSNDYVVRKLEKLCTVKD---ISPKKHVSGTVTFPLWEGFNSGKCGV 253 (276)
Q Consensus 178 ~~~~~~~~~l~l~l~e~~~~~-~V~~GEN~Gr~L~h~~VVR~~~~~g~~g~---w~~~~~~~~~~~~~l~~~~~~~~~~v 253 (276)
...+..++.|+|||+||+++. |+ +|||.+++|+|+||||++.+ |.||+ .++....+.++++.||+.|+++++.+
T Consensus 79 ~~~~~~~~~L~v~LvED~i~~~Q~-~G~n~~~~y~HnhVvRa~~~-~~~G~~i~l~~~~~~~~~~~~~lp~~~~~~n~~V 156 (183)
T 2r2c_A 79 EGNTLPKSMVQVYLLEDKLIAPQV-DGNTTVENYEHNHVLRGAVN-GIWGEEFVNLKDYLYTYAVEPLSGMSFVAENYSI 156 (183)
T ss_dssp TTCCCCSEEEEEEEEEEC------------------CEEEEEETT-CTTCEECCTTCCEEEEEECCCCTTCCCCGGGEEE
T ss_pred ccCCCCCeEEEEEEEECCceeeec-CCCCCCcCcEeceEEEeecc-cccCceEeccCCccEEEEEEEECCcccccccCEE
Confidence 112334689999999999996 66 99999999999999999876 57765 23334567788899999999999999
Q ss_pred EEEEEcCC-CceeEEeeccCCCC
Q 023845 254 AVFVQNNS-HHIFGSQNFQLPDN 275 (276)
Q Consensus 254 VvfVQ~~~-G~ILgAa~~~lp~~ 275 (276)
|+||+|.+ |+|++|++.++...
T Consensus 157 VafV~d~~tg~V~naa~~~i~~~ 179 (183)
T 2r2c_A 157 VAFVYDVQTFEVYDVVHVKINPQ 179 (183)
T ss_dssp EEEEEETTTCCEEEEEEEEEECC
T ss_pred EEEEEeCCCCcEeeEeecccCCc
Confidence 99999986 99999999987543
No 3
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.35 E-value=4.9e-07 Score=65.05 Aligned_cols=80 Identities=24% Similarity=0.337 Sum_probs=60.0
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
.+.|-+|++.+|++|-.....|.++++++ .+++..+.+++|- ++ ..++++|+.+ +|+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~vd~~~-----------~~-------~~~~~~~v~~--~Pt 59 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEM---PDAVEVEYINVME-----------NP-------QKAMEYGIMA--VPT 59 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHC---SSSEEEEEEESSS-----------SC-------CTTTSTTTCC--SSE
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHc---CCceEEEEEECCC-----------CH-------HHHHHCCCcc--cCE
Confidence 46788899999999999999999998875 3477777777751 11 2234567776 999
Q ss_pred EEEcCeEeccCC-ChhhHHHHHHc
Q 023845 123 LVFQGRVQCQGN-DQDGMLSAIAN 145 (276)
Q Consensus 123 ~vVnG~~~~~g~-~~~~~~~~i~~ 145 (276)
+++||+....|. +.+.+.+.|++
T Consensus 60 ~~~~G~~~~~G~~~~~~l~~~l~~ 83 (85)
T 1fo5_A 60 IVINGDVEFIGAPTKEALVEAIKK 83 (85)
T ss_dssp EEETTEEECCSSSSSHHHHHHHHH
T ss_pred EEECCEEeeecCCCHHHHHHHHHH
Confidence 999998745554 57778777764
No 4
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.29 E-value=4.7e-07 Score=65.14 Aligned_cols=80 Identities=21% Similarity=0.305 Sum_probs=59.9
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
+.|.+|++.+|++|-.....|.++++++ .+++..+.+++|- ++ ..++++|+.+ +|++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~vd~~~-----------~~-------~~~~~~~v~~--~Pt~ 59 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEF---GDKIDVEKIDIMV-----------DR-------EKAIEYGLMA--VPAI 59 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHH---CSSCCEEEECTTT-----------CG-------GGGGGTCSSC--SSEE
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHh---cCCeEEEEEECCC-----------CH-------HHHHhCCcee--eCEE
Confidence 4577899999999999999999998865 3467777777651 11 2455678877 9999
Q ss_pred EEcCeEeccCC-ChhhHHHHHHcC
Q 023845 124 VFQGRVQCQGN-DQDGMLSAIANA 146 (276)
Q Consensus 124 vVnG~~~~~g~-~~~~~~~~i~~~ 146 (276)
++||+....|. +.+.+.+.|++.
T Consensus 60 ~~~G~~~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 60 AINGVVRFVGAPSREELFEAINDE 83 (85)
T ss_dssp EETTTEEEECSSCCHHHHHHHHHH
T ss_pred EECCEEEEccCCCHHHHHHHHHHH
Confidence 99998744454 677888877754
No 5
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.23 E-value=1.6e-06 Score=66.81 Aligned_cols=80 Identities=11% Similarity=0.194 Sum_probs=57.4
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
...|.+|++.+|+.|-.+..+|.++.. +|-..-+.+| +++. ..+++++| ++ +|+
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~-------~i~~~~vdi~------------~~~~----~el~~~~g-~~--vP~ 69 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD-------RFILQEVDIT------------LPEN----STWYERYK-FD--IPV 69 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS-------SSEEEEEETT------------SSTT----HHHHHHSS-SS--CSE
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh-------CCeEEEEECC------------Ccch----HHHHHHHC-CC--CCE
Confidence 356888999999999999999998865 2222222222 1111 45677888 76 999
Q ss_pred EEEcCeEe-ccCCChhhHHHHHHcCCC
Q 023845 123 LVFQGRVQ-CQGNDQDGMLSAIANAPK 148 (276)
Q Consensus 123 ~vVnG~~~-~~g~~~~~~~~~i~~~~~ 148 (276)
+++||+.. ..|-+.+.+.+.|.+..+
T Consensus 70 l~~~g~~~~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 70 FHLNGQFLMMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp EEESSSEEEESSCCHHHHHHHHHSSSC
T ss_pred EEECCEEEEecCCCHHHHHHHHHHHHh
Confidence 99999864 556678899999987654
No 6
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.20 E-value=1.1e-06 Score=64.20 Aligned_cols=68 Identities=22% Similarity=0.232 Sum_probs=47.7
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
-|++|++.+|++|..+...|.++.+++ ++-.--+.||- | ++ ....++++|+++ +|+++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~-----~~~~~~~~v~~-------~----~~----~~~~~~~~gv~~--vPt~~ 60 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPS-----KYTVEIVHLGT-------D----KA----RIAEAEKAGVKS--VPALV 60 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTT-----TEEEEEEETTT-------C----SS----THHHHHHHTCCE--EEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhc-----CCeEEEEEecC-------C----hh----hHHHHHHcCCCc--CCEEE
Confidence 589999999999999999999998754 33222334431 1 11 123457788887 99999
Q ss_pred EcCeEeccCC
Q 023845 125 FQGRVQCQGN 134 (276)
Q Consensus 125 VnG~~~~~g~ 134 (276)
|||+....|.
T Consensus 61 i~g~~~~~G~ 70 (80)
T 2k8s_A 61 IDGAAFHINF 70 (80)
T ss_dssp ETTEEEEEEE
T ss_pred ECCEEEEecc
Confidence 9998655543
No 7
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.16 E-value=9.4e-06 Score=57.51 Aligned_cols=72 Identities=13% Similarity=0.260 Sum_probs=51.8
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
..|++|++ +|++|......|.++.+++ ..++..+.+. ....++++|+.+ +|++
T Consensus 2 ~~v~f~a~-wC~~C~~~~~~l~~~~~~~---~~~~~~~~v~---------------------~~~~~~~~~v~~--~Pt~ 54 (77)
T 1ilo_A 2 MKIQIYGT-GCANCQMLEKNAREAVKEL---GIDAEFEKIK---------------------EMDQILEAGLTA--LPGL 54 (77)
T ss_dssp EEEEEECS-SSSTTHHHHHHHHHHHHHT---TCCEEEEEEC---------------------SHHHHHHHTCSS--SSCE
T ss_pred cEEEEEcC-CChhHHHHHHHHHHHHHHc---CCceEEEEec---------------------CHHHHHHCCCCc--CCEE
Confidence 46888886 9999999999999998865 3354444332 134577889888 9999
Q ss_pred EEcCeEeccCC--ChhhHHHH
Q 023845 124 VFQGRVQCQGN--DQDGMLSA 142 (276)
Q Consensus 124 vVnG~~~~~g~--~~~~~~~~ 142 (276)
++||+....|. +.+.+.+.
T Consensus 55 ~~~G~~~~~G~~~~~~~l~~~ 75 (77)
T 1ilo_A 55 AVDGELKIMGRVASKEEIKKI 75 (77)
T ss_dssp EETTEEEECSSCCCHHHHHHH
T ss_pred EECCEEEEcCCCCCHHHHHHH
Confidence 99999866565 35555443
No 8
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.04 E-value=7.9e-06 Score=60.69 Aligned_cols=79 Identities=11% Similarity=0.121 Sum_probs=56.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
-|.+|++.+|++|-.+..+|.++.-.+ . .++|+. .......+.+..+.+.++..+ +|+++
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~gi~~-----~----~~~v~~---------~~~~~~~~~~~~l~~~~g~~~--vP~l~ 72 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREGVDF-----E----VIWIDK---------LEGEERKKVIEKVHSISGSYS--VPVVV 72 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHTCCC-----E----EEEGGG---------CCHHHHHHHHHHHHHHHSSSC--SCEEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcCCCc-----E----EEEeee---------CCccchHHHHHHHHHhcCCCC--cCEEE
Confidence 378999999999999999999986533 1 134432 110111223466777888776 99999
Q ss_pred EcCeEeccCCChhhHHHHHH
Q 023845 125 FQGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 125 VnG~~~~~g~~~~~~~~~i~ 144 (276)
+||+ .+.|.+.+.+.++|.
T Consensus 73 ~~g~-~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 73 KGDK-HVLGYNEEKLKELIR 91 (92)
T ss_dssp ETTE-EEESCCHHHHHHHHH
T ss_pred ECCE-EEeCCCHHHHHHHhc
Confidence 9996 466778998888775
No 9
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=97.94 E-value=1.2e-05 Score=58.31 Aligned_cols=78 Identities=13% Similarity=0.209 Sum_probs=51.1
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhC--CCCCCcce
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALN--LDTMFTPQ 122 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g--~~~vYTPq 122 (276)
-|.+|++.+|++|..+..+|.+|+.++ +++-...+.++- | +. .+ ..+.+.+| ..+ +|+
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~----~~i~~~~vdi~~-------~----~~--~~-~~l~~~~~~~~~~--vP~ 61 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNER----DDFQYQYVDIRA-------E----GI--TK-EDLQQKAGKPVET--VPQ 61 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHH----SSCEEEEECHHH-------H----TC--CS-HHHHHHTCCCSCC--SCE
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcC----CCceEEEEeccc-------C----hH--HH-HHHHHHhCCCCce--eCe
Confidence 377899999999999999999998753 243333333331 1 11 01 34667777 555 999
Q ss_pred EEEcCeEeccCCChhhHHHHHHc
Q 023845 123 LVFQGRVQCQGNDQDGMLSAIAN 145 (276)
Q Consensus 123 ~vVnG~~~~~g~~~~~~~~~i~~ 145 (276)
+++||+.. .|. +.+.+.+++
T Consensus 62 i~~~g~~i-~~~--~~l~~~~~~ 81 (85)
T 1ego_A 62 IFVDQQHI-GGY--TDFAAWVKE 81 (85)
T ss_dssp EEETTEEE-ESS--HHHHHHHHH
T ss_pred EEECCEEE-ECH--HHHHHHHHH
Confidence 99999754 443 556665553
No 10
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.91 E-value=1.3e-05 Score=60.94 Aligned_cols=74 Identities=20% Similarity=0.270 Sum_probs=53.5
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE-
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV- 124 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v- 124 (276)
|.+||..+|+.|-.+..+|.+++.++ . ..+.|| .+ ...++++|++ +|+++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~--~~vdid-----------~~-------~~l~~~~g~~---vPtl~~ 53 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------F--FSVFID-----------DD-------AALESAYGLR---VPVLRD 53 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------E--EEEECT-----------TC-------HHHHHHHTTT---CSEEEC
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------e--EEEECC-----------CC-------HHHHHHhCCC---cCeEEE
Confidence 78999999999999999999987742 1 223333 12 2355667764 89999
Q ss_pred EcCeEeccCCChhhHHHHHHcCCC
Q 023845 125 FQGRVQCQGNDQDGMLSAIANAPK 148 (276)
Q Consensus 125 VnG~~~~~g~~~~~~~~~i~~~~~ 148 (276)
+||+...++.+.+.+.+.|.+...
T Consensus 54 ~~G~~v~g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 54 PMGRELDWPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp TTCCEEESCCCHHHHHHHHHTCC-
T ss_pred ECCEEEeCCCCHHHHHHHHHHHHH
Confidence 899887644578889888876543
No 11
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.90 E-value=1.6e-05 Score=65.22 Aligned_cols=100 Identities=18% Similarity=0.197 Sum_probs=65.3
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc-------------------------c-----CC
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW-------------------------D-----YM 91 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW-------------------------D-----yl 91 (276)
.++||| |.|=.||+|=..+..|.+|.+++ .+++...-+|+.+- + ..
T Consensus 22 ~~~vvE-f~dy~Cp~C~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~ 97 (184)
T 4dvc_A 22 SPVVSE-FFSFYCPHCNTFEPIIAQLKQQL---PEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIH 97 (184)
T ss_dssp SCEEEE-EECTTCHHHHHHHHHHHHHHHTS---CTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCEEEE-EECCCCHhHHHHhHHHHHHHhhc---CCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 457888 66999999999999999998876 34555555666421 0 00
Q ss_pred CCCCCCCCc------------------------c---ccHHHHHHHHHhCCCCCCcceEEEcCeEeccCC---ChhhHHH
Q 023845 92 GWKDPYGSS------------------------Q---WTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGN---DQDGMLS 141 (276)
Q Consensus 92 GWkD~fa~~------------------------~---~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~---~~~~~~~ 141 (276)
-|.....+. . ..++....++.+|+++ ||+|+|||+..+.+. +.+++..
T Consensus 98 ~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~g--TPtfiINGky~v~~~~~~s~e~~~~ 175 (184)
T 4dvc_A 98 TLRKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTG--VPAVVVNNRYLVQGQSAKSLDEYFD 175 (184)
T ss_dssp TSCCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCS--SSEEEETTTEEECGGGCSSHHHHHH
T ss_pred HHhhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCc--CCEEEECCEEeeCCcCCCCHHHHHH
Confidence 111111111 1 2355667788999998 999999998765543 3566666
Q ss_pred HHHcCC
Q 023845 142 AIANAP 147 (276)
Q Consensus 142 ~i~~~~ 147 (276)
.|+..+
T Consensus 176 ~i~~Ll 181 (184)
T 4dvc_A 176 LVNYLL 181 (184)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 666543
No 12
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.88 E-value=4e-05 Score=59.00 Aligned_cols=75 Identities=8% Similarity=0.113 Sum_probs=49.6
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHH-hCCCCCCcceEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEA-LNLDTMFTPQLV 124 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~-~g~~~vYTPq~v 124 (276)
|.+||..+||.|-.|.++|.+..-.+ . -+.|+ .++ ..|+. +.+. .|.++ +|+++
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~gi~y----~-----~idi~-----------~d~--~~~~~-~~~~~~G~~t--VP~I~ 60 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTANRIAY----D-----EVDIE-----------HNR--AAAEF-VGSVNGGNRT--VPTVK 60 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHTTCCC----E-----EEETT-----------TCH--HHHHH-HHHHSSSSSC--SCEEE
T ss_pred EEEEcCCCCHhHHHHHHHHHhcCCce----E-----EEEcC-----------CCH--HHHHH-HHHHcCCCCE--eCEEE
Confidence 78999999999999999999865432 0 12222 222 22332 3333 36777 89999
Q ss_pred Ec-CeEeccCCChhhHHHHHHcC
Q 023845 125 FQ-GRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 125 Vn-G~~~~~g~~~~~~~~~i~~~ 146 (276)
|+ |. ..++.+.+++.++|.+.
T Consensus 61 i~Dg~-~l~~~~~~el~~~L~el 82 (92)
T 2lqo_A 61 FADGS-TLTNPSADEVKAKLVKI 82 (92)
T ss_dssp ETTSC-EEESCCHHHHHHHHHHH
T ss_pred EeCCE-EEeCCCHHHHHHHHHHh
Confidence 94 64 55666788888877754
No 13
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.85 E-value=5.2e-05 Score=53.43 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=48.8
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|++.+|++|..+..+|.++.-.+ . .++++ .++ +. ..+.+.+|..+ +|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~i~~-------~--~~di~-----------~~~---~~-~~~~~~~~~~~--vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRAGLAY-------N--TVDIS-----------LDD---EA-RDYVMALGYVQ--APVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC-------E--EEETT-----------TCH---HH-HHHHHHTTCBC--CCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHcCCCc-------E--EEECC-----------CCH---HH-HHHHHHcCCCc--cCEEEE
Confidence 67999999999999999999864321 1 12222 111 11 22335678777 999999
Q ss_pred cCeEeccCCChhhHHHHHH
Q 023845 126 QGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~ 144 (276)
||+. ..|.+.+.+.+.|.
T Consensus 57 ~g~~-~~g~~~~~l~~~l~ 74 (75)
T 1r7h_A 57 DGEH-WSGFRPERIKQLQA 74 (75)
T ss_dssp TTEE-EESCCHHHHHHHHC
T ss_pred CCeE-EcCCCHHHHHHHHh
Confidence 9975 56777887777663
No 14
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.82 E-value=4.9e-05 Score=67.09 Aligned_cols=89 Identities=15% Similarity=0.235 Sum_probs=65.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCC-CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFE-LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~-~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
....++|++|++.+|++|+.....|.+++..+.. ..++|....+.++- ....++.+++++
T Consensus 136 ~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~------------------~~~~~~~~~V~~- 196 (243)
T 2hls_A 136 LKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE------------------NPDIADKYGVMS- 196 (243)
T ss_dssp CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT------------------CHHHHHHTTCCS-
T ss_pred cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc------------------CHHHHHHcCCee-
Confidence 3467899999999999999999999999875410 01567766665541 124567789887
Q ss_pred CcceEEEcCeEeccCCC-hhhHHHHHHcCCC
Q 023845 119 FTPQLVFQGRVQCQGND-QDGMLSAIANAPK 148 (276)
Q Consensus 119 YTPq~vVnG~~~~~g~~-~~~~~~~i~~~~~ 148 (276)
+|++++||+....|.. .+.+...|.+...
T Consensus 197 -vPt~~i~G~~~~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 197 -VPSIAINGYLVFVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp -SSEEEETTEEEEESCCCHHHHHHHHHHHHT
T ss_pred -eCeEEECCEEEEeCCCCHHHHHHHHHHHhh
Confidence 9999999997666654 6677777776543
No 15
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.80 E-value=7.3e-05 Score=57.89 Aligned_cols=89 Identities=12% Similarity=0.204 Sum_probs=65.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|++|-.....|.++.+++ .++|..+.++++ .+.....++.+++..
T Consensus 25 ~~k~~lv-~f~a~wC~~C~~~~~~l~~~~~~~---~~~v~~~~v~~~----------------~d~~~~~~~~~~v~~-- 82 (126)
T 2l57_A 25 EGIPTII-MFKTDTCPYCVEMQKELSYVSKER---EGKFNIYYARLE----------------EEKNIDLAYKYDANI-- 82 (126)
T ss_dssp SSSCEEE-EEECSSCHHHHHHHHHHHHHHHHS---SSSCEEEEEETT----------------SSHHHHHHHHTTCCS--
T ss_pred CCCcEEE-EEECCCCccHHHHHHHHHHHHHHh---cCCeEEEEEeCC----------------CCchHHHHHHcCCcc--
Confidence 3445555 466889999999999999998875 357888888743 223456788899887
Q ss_pred cceEEE---cCeEe--ccC-CChhhHHHHHHcCCCCC
Q 023845 120 TPQLVF---QGRVQ--CQG-NDQDGMLSAIANAPKFP 150 (276)
Q Consensus 120 TPq~vV---nG~~~--~~g-~~~~~~~~~i~~~~~~~ 150 (276)
+|++++ ||+.. ..| .+.+.+.+.|++....+
T Consensus 83 ~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (126)
T 2l57_A 83 VPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKE 119 (126)
T ss_dssp SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCC
T ss_pred eeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccc
Confidence 999888 89864 334 46788888888766543
No 16
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.79 E-value=8.5e-05 Score=54.94 Aligned_cols=82 Identities=21% Similarity=0.256 Sum_probs=60.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ .+++..+.+++|- .....+.+++.. +
T Consensus 20 ~~~~vv-~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 75 (106)
T 1xwb_A 20 GKLVVL-DFFATWCGPCKMISPKLVELSTQF---ADNVVVLKVDVDE------------------CEDIAMEYNISS--M 75 (106)
T ss_dssp TSEEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTEEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCcCHHHHHhhHHHHHHHHHh---CCCeEEEEEeccc------------------hHHHHHHcCCCc--c
Confidence 445555 566789999999999999998865 3678888777751 235678889887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
|++++ ||+.. ..|.+.+.+...|++.
T Consensus 76 Pt~~~~~~G~~~~~~~g~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 76 PTFVFLKNGVKVEEFAGANAKRLEDVIKAN 105 (106)
T ss_dssp SEEEEEETTEEEEEEESCCHHHHHHHHHHT
T ss_pred cEEEEEcCCcEEEEEcCCCHHHHHHHHHHh
Confidence 99888 88753 3566677777777653
No 17
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.77 E-value=5.7e-05 Score=73.55 Aligned_cols=82 Identities=13% Similarity=0.188 Sum_probs=63.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
..++.|++|++.+|+.||.+...|.+++.++ ++|....+.++ .....+.++++++ +
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~----~~v~~~~vd~~------------------~~~~~~~~~~i~s--v 171 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLN----PRIKHTAIDGG------------------TFQNEITERNVMG--V 171 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHC----TTEEEEEEETT------------------TCHHHHHHTTCCS--S
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHc----CceEEEEEech------------------hhHHHHHHhCCCc--c
Confidence 4578999999999999999999999998764 46666666554 1134688899998 9
Q ss_pred ceEEEcCeEeccCCC-hhhHHHHHHcC
Q 023845 121 PQLVFQGRVQCQGND-QDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vVnG~~~~~g~~-~~~~~~~i~~~ 146 (276)
|++++||+....|.. .+.+.+.|...
T Consensus 172 Pt~~i~g~~~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 172 PAVFVNGKEFGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp SEEEETTEEEEESCCCHHHHHHHHCCS
T ss_pred CEEEECCEEEecCCCCHHHHHHHHhhc
Confidence 999999988776654 45566665544
No 18
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.75 E-value=3.7e-05 Score=60.34 Aligned_cols=66 Identities=24% Similarity=0.259 Sum_probs=45.9
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+||..+||.|..|.++|.++.-.+ . .+.|| ..+...+.+..+.+..|.++ +|+++|
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~~i~~-----~----~~dvd-----------~~~~~~~~~~~l~~~~g~~t--vP~vfi 76 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSLGVEC-----N----VLELD-----------QVDDGARVQEVLSEITNQKT--VPNIFV 76 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC-----E----EEETT-----------TSTTHHHHHHHHHHHHSCCS--SCEEEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHcCCCc-----E----EEEec-----------CCCChHHHHHHHHHHhCCCc--cCEEEE
Confidence 56699999999999999999975422 1 12332 11233456666777788777 999999
Q ss_pred cCeEeccCC
Q 023845 126 QGRVQCQGN 134 (276)
Q Consensus 126 nG~~~~~g~ 134 (276)
||+. ++|.
T Consensus 77 ~g~~-igG~ 84 (114)
T 3h8q_A 77 NKVH-VGGC 84 (114)
T ss_dssp TTEE-EESH
T ss_pred CCEE-EeCH
Confidence 9974 4443
No 19
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.73 E-value=0.00013 Score=59.81 Aligned_cols=99 Identities=18% Similarity=0.159 Sum_probs=64.7
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc---------------------cCCC--C--CCC
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW---------------------DYMG--W--KDP 96 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW---------------------DylG--W--kD~ 96 (276)
.++.|..|++-.||+|=.....|.++.+++ ++|-..-.|+..+ .+.- | .+.
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~----~~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~ 97 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDAD----PNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGK 97 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHC----TTEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhC----CCEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 458888999999999999999999998864 3443333344321 1000 0 000
Q ss_pred C-----------------------CCcc---ccHHHHHHHHHhCCCCCCcceEEEcCeEeccCCChhhHHHHHHcC
Q 023845 97 Y-----------------------GSSQ---WTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 97 f-----------------------a~~~---~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i~~~ 146 (276)
+ .++. ..++...+++.+|+.+ ||+++|||+...+..+.+.+...|.+.
T Consensus 98 ~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g--tPt~~i~g~~~~G~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 98 ANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNG--TPSFVVEDALVPGFVEQSQLQDAVDRA 171 (175)
T ss_dssp CSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCS--SSEEEETTEEECSCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCcc--CCEEEECCEEeeCCCCHHHHHHHHHHH
Confidence 0 0111 1455667788999988 999999998555444678888888754
No 20
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.73 E-value=4.1e-05 Score=58.71 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=51.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHH---HHHhCCCCCCcc
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAY---VEALNLDTMFTP 121 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y---~~~~g~~~vYTP 121 (276)
-|.+|+..+|++|-.|..+|.++.-.+ . .+.|+- -+ ..+++..+ .+..|.++ +|
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~i~y-----~----~vdI~~----------~~--~~~~~~~~~~l~~~~g~~~--vP 79 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLGVDF-----D----YVYVDR----------LE--GKEEEEAVEEVRRFNPSVS--FP 79 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTBCE-----E----EEEGGG----------CC--HHHHHHHHHHHHHHCTTCC--SC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCCc-----E----EEEeec----------cC--cccHHHHHHHHHHhCCCCc--cC
Confidence 477899999999999999999986532 1 133431 01 12222222 23357776 99
Q ss_pred eEEEcCeEeccCCChhhHHHHH
Q 023845 122 QLVFQGRVQCQGNDQDGMLSAI 143 (276)
Q Consensus 122 q~vVnG~~~~~g~~~~~~~~~i 143 (276)
+++|||...++|.+.+++..+|
T Consensus 80 ~l~i~~~~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 80 TTIINDEKAIVGFKEKEIRESL 101 (103)
T ss_dssp EEEETTTEEEESCCHHHHHHHT
T ss_pred EEEECCCEEEEcCCHHHHHHHh
Confidence 9999994467788888887765
No 21
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.71 E-value=0.00011 Score=61.67 Aligned_cols=99 Identities=18% Similarity=0.215 Sum_probs=67.7
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-------------------ccCC--------CCC
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-------------------WDYM--------GWK 94 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-------------------WDyl--------GWk 94 (276)
.+++|..|++-.|++|-.....|.+|.+++ .++|...-+++++ |.+. .|.
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~---~~~v~~~~~~~~~~~~s~~aa~a~~aa~~~g~~~~~~~lf~~~~~~~ 101 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTA---PQDVVLKQVPIAFNAGMKPLQQLYYTLQALERPDLHPKVFTAIHTER 101 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTC---CTTEEEEEEECCSSGGGHHHHHHHHHHHHTTCTTHHHHHHHHHHTSC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHC---CCCeEEEEEecccCcchHHHHHHHHHHHhcCHHHHHHHHHHHHHHhc
Confidence 467888899999999999999999999876 3478888888873 1100 000
Q ss_pred CCCCCcc---------------------------ccHHHHHHHHHhCCCCCCcceEEEcCeEeccCCCh----hhHHHHH
Q 023845 95 DPYGSSQ---------------------------WTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQ----DGMLSAI 143 (276)
Q Consensus 95 D~fa~~~---------------------------~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~----~~~~~~i 143 (276)
-.+.+++ ..++....++.+|+.+ ||++||||+....|+.. +.+.+.|
T Consensus 102 ~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~g--tPt~ving~~~~~g~~~~~~~e~~~~~i 179 (195)
T 3hd5_A 102 KRLFDKKAMGEWAASQGVDRAKFDSVFDSFSVQTQVQRASQLAEAAHIDG--TPAFAVGGRYMTSPVLAGNDYAGALKVV 179 (195)
T ss_dssp CCCCSHHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHTTCCS--SSEEEETTTEEECTTTTTGGGTTHHHHH
T ss_pred cCCCCHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhCCCc--CceEEECCEEEeCccccCChHHHHHHHH
Confidence 0111111 1344556678888887 99999999988877643 4566655
Q ss_pred Hc
Q 023845 144 AN 145 (276)
Q Consensus 144 ~~ 145 (276)
+.
T Consensus 180 ~~ 181 (195)
T 3hd5_A 180 DQ 181 (195)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 22
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.71 E-value=0.00013 Score=56.95 Aligned_cols=99 Identities=14% Similarity=0.182 Sum_probs=63.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccC-CCCCCCEEEEEEeeeccc--------CCCCCCCCCCccccHH---HH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGD-FELGVPVIVLAYHVDYWD--------YMGWKDPYGSSQWTVR---QK 107 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~-~~~~~~VIaLa~hVdYWD--------ylGWkD~fa~~~~t~R---q~ 107 (276)
.++++||..| +.+|++|......|.++.+++ . ..++..+++.+|--. ..|+ .-+...+. ..
T Consensus 32 ~gk~vll~F~-~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~v~~d~~~~~~~~~~~~~~~----~~~~~~d~~~~~~ 104 (148)
T 3fkf_A 32 RNRYLLLNFW-ASWCDPQPEANAELKRLNKEYKK--NKNFAMLGISLDIDREAWETAIKKDTL----SWDQVCDFTGLSS 104 (148)
T ss_dssp TTSEEEEEEE-CGGGCCCHHHHHHHHHHHHHTTT--CTTEEEEEEECCSCHHHHHHHHHHTTC----CSEEECCSCGGGC
T ss_pred CCcEEEEEEE-CCCCHHHHHHhHHHHHHHHHhcC--CCCeEEEEEECCCCHHHHHHHHHHcCC----CceEEEccCCcch
Confidence 3456777655 899999999999999998875 3 446888888776310 0000 00001110 23
Q ss_pred HHHHHhCCCCCCcceEE-E--cCeEeccCCChhhHHHHHHcCC
Q 023845 108 AYVEALNLDTMFTPQLV-F--QGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 108 ~Y~~~~g~~~vYTPq~v-V--nG~~~~~g~~~~~~~~~i~~~~ 147 (276)
...+.+++.. +|.++ | ||+......+.+.+...|++.+
T Consensus 105 ~~~~~~~v~~--~P~~~lid~~G~i~~~~~~~~~l~~~l~~ll 145 (148)
T 3fkf_A 105 ETAKQYAILT--LPTNILLSPTGKILARDIQGEALTGKLKELL 145 (148)
T ss_dssp HHHHHTTCCS--SSEEEEECTTSBEEEESCCHHHHHHHHHHHC
T ss_pred HHHHhcCCCC--cCEEEEECCCCeEEEecCCHHHHHHHHHHHH
Confidence 5577888876 89854 4 6777666667777887777654
No 23
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.71 E-value=5.8e-05 Score=54.36 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=46.9
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|++.+|++|..+..+|.++.-. +. .++++ .+++ ...+.+.+|..+ +|++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~~i~-------~~--~vdi~-----------~~~~----~~~~~~~~g~~~--vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENRGFD-------FE--MINVD-----------RVPE----AAEALRAQGFRQ--LPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCC-------CE--EEETT-----------TCHH----HHHHHHHTTCCS--SCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHHHCCCC-------eE--EEECC-----------CCHH----HHHHHHHhCCCc--cCEEEE
Confidence 6789999999999999999986432 11 12222 1222 122334578777 999999
Q ss_pred cCeEeccCCChhhHHHHHH
Q 023845 126 QGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~ 144 (276)
||+. ..|.+.+.+...|.
T Consensus 57 ~g~~-~~g~~~~~l~~~l~ 74 (81)
T 1h75_A 57 GDLS-WSGFRPDMINRLHP 74 (81)
T ss_dssp TTEE-EESCCHHHHGGGSC
T ss_pred CCEE-EecCCHHHHHHHHh
Confidence 9975 56666666555443
No 24
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.70 E-value=7.3e-05 Score=57.67 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=59.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|++|-.....|.+|++++ ++|..+.+++| .....++++++..
T Consensus 30 ~~k~vlv-~F~a~wC~~C~~~~p~l~~l~~~~----~~v~~~~vd~d------------------~~~~l~~~~~v~~-- 84 (116)
T 3qfa_C 30 GDKLVVV-DFSATWCGPSKMIKPFFHSLSEKY----SNVIFLEVDVD------------------DCQDVASECEVKS-- 84 (116)
T ss_dssp TTSCEEE-EEECTTCHHHHHHHHHHHHHHTTC----TTSEEEEEETT------------------TTHHHHHHTTCCS--
T ss_pred CCCEEEE-EEECCCCHHHHHHHHHHHHHHHHC----CCCEEEEEECC------------------CCHHHHHHcCCcc--
Confidence 4456666 455679999999999999999875 34666666664 2246788899988
Q ss_pred cceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 120 TPQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
+|++++ ||+.. ..|.+.+.+...|++
T Consensus 85 ~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 114 (116)
T 3qfa_C 85 MPTFQFFKKGQKVGEFSGANKEKLEATINE 114 (116)
T ss_dssp SSEEEEESSSSEEEEEESCCHHHHHHHHHH
T ss_pred ccEEEEEeCCeEEEEEcCCCHHHHHHHHHH
Confidence 899888 77653 345577777777764
No 25
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.69 E-value=7e-05 Score=56.65 Aligned_cols=66 Identities=15% Similarity=0.133 Sum_probs=46.0
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|++.+|++|..+..+|.++...+ +++.. +.++- ++...+.+....+.+|.++ +|++++
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~----~~~~~--vdi~~-----------~~~~~~~~~~l~~~~g~~~--vP~i~~ 74 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE----GLLEF--VDITA-----------TSDTNEIQDYLQQLTGART--VPRVFI 74 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT----TSEEE--EEGGG-----------STTHHHHHHHHHHHHSCCC--SCEEEE
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC----CccEE--EEccC-----------CCCHHHHHHHHHHHhCCCC--cCeEEE
Confidence 67799999999999999999987653 23222 34431 1111233455677788877 999999
Q ss_pred cCeEe
Q 023845 126 QGRVQ 130 (276)
Q Consensus 126 nG~~~ 130 (276)
||+..
T Consensus 75 ~g~~i 79 (105)
T 1kte_A 75 GKECI 79 (105)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 99754
No 26
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.67 E-value=1.7e-05 Score=57.79 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=48.2
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCC-----CCC
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNL-----DTM 118 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~-----~~v 118 (276)
..|.+|+..+|++|-.|..+|.++.-.+ .+ ..+|.. . . ......+.+..|. ++
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~i~~-----~~----~~vd~~---------~--~-~~~~~el~~~~g~~~~~~~~- 61 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENNIAF-----DE----TIIDDY---------A--Q-RSKFYDEMNQSGKVIFPIST- 61 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTTCCC-----EE----EECCSH---------H--H-HHHHHHHHHTTTCCSSCCCS-
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcCCCc-----eE----EEeecC---------C--C-hhHHHHHHHHhCCCCCCCCc-
Confidence 3488999999999999999999876422 11 123311 1 0 1122346666776 56
Q ss_pred CcceEEEcCeEeccCCChhhHHHHHHc
Q 023845 119 FTPQLVFQGRVQCQGNDQDGMLSAIAN 145 (276)
Q Consensus 119 YTPq~vVnG~~~~~g~~~~~~~~~i~~ 145 (276)
+|+++|||+.. .| .+.+...+++
T Consensus 62 -vP~i~i~g~~i-~g--~~~i~~~~~~ 84 (89)
T 3msz_A 62 -VPQIFIDDEHI-GG--FTELKANADK 84 (89)
T ss_dssp -SCEEEETTEEE-ES--HHHHHHTHHH
T ss_pred -cCEEEECCEEE-eC--hHHHHHHHHH
Confidence 99999999754 34 3555555443
No 27
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=97.67 E-value=9.1e-05 Score=57.02 Aligned_cols=83 Identities=20% Similarity=0.313 Sum_probs=60.0
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||+ |++.+|++|-.....|.++.+++ +++..+.++++- ......+++++..
T Consensus 36 ~~~~~vv~-f~a~wC~~C~~~~~~l~~~~~~~----~~~~~~~vd~~~-----------------~~~~~~~~~~v~~-- 91 (124)
T 1faa_A 36 GDKPVVLD-MFTQWCGPCKAMAPKYEKLAEEY----LDVIFLKLDCNQ-----------------ENKTLAKELGIRV-- 91 (124)
T ss_dssp TTSCEEEE-EECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEECSS-----------------TTHHHHHHHCCSS--
T ss_pred CCCEEEEE-EECCcCHhHHHHhHHHHHHHHHC----CCCEEEEEecCc-----------------chHHHHHHcCCCe--
Confidence 35567765 55899999999999999998865 356666666540 1245677889887
Q ss_pred cceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 120 TPQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
+|++++ ||+.. ..|.+.+.+.+.|++.
T Consensus 92 ~Pt~~~~~~G~~~~~~~G~~~~~l~~~i~~~ 122 (124)
T 1faa_A 92 VPTFKILKENSVVGEVTGAKYDKLLEAIQAA 122 (124)
T ss_dssp SSEEEEEETTEEEEEEESSCHHHHHHHHHHH
T ss_pred eeEEEEEeCCcEEEEEcCCCHHHHHHHHHHh
Confidence 899888 88764 3566677777777653
No 28
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.66 E-value=0.00023 Score=54.14 Aligned_cols=82 Identities=17% Similarity=0.338 Sum_probs=59.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
.+++| -.|++.+|+.|-.....|.++++++ +++..+.++++ .....++++++.. +
T Consensus 19 ~~~~v-v~f~a~wC~~C~~~~~~l~~~~~~~----~~v~~~~vd~~------------------~~~~l~~~~~v~~--~ 73 (110)
T 2l6c_A 19 LSDAI-VFFHKNLCPHCKNMEKVLDKFGARA----PQVAISSVDSE------------------ARPELMKELGFER--V 73 (110)
T ss_dssp CSEEE-EEEECSSCSTHHHHHHHHHHHHTTC----TTSCEEEEEGG------------------GCHHHHHHTTCCS--S
T ss_pred CCCEE-EEEECCCCHhHHHHHHHHHHHHHHC----CCcEEEEEcCc------------------CCHHHHHHcCCcc--c
Confidence 34554 4578899999999999999999864 35555555554 2345678889887 9
Q ss_pred ceEEE--cCeEec--cC-CChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQC--QG-NDQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g-~~~~~~~~~i~~~~ 147 (276)
|++++ ||+... .| .+.+.+...|....
T Consensus 74 Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 74 PTLVFIRDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp CEEEEEESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred CEEEEEECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 99988 997643 35 47888888887654
No 29
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.65 E-value=0.00014 Score=52.12 Aligned_cols=72 Identities=21% Similarity=0.344 Sum_probs=49.5
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|++.+|++|..+..+|.++.-.+ . .++++ . ..+.+..|.+.+|..+ +|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~i~~-------~--~~~i~-----------~---~~~~~~~~~~~~~~~~--vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKGVSF-------Q--ELPID-----------G---NAAKREEMIKRSGRTT--VPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHTCCC-------E--EEECT-----------T---CSHHHHHHHHHHSSCC--SCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCCCCc-------E--EEECC-----------C---CHHHHHHHHHHhCCCC--cCEEEE
Confidence 67899999999999999999874321 1 12232 1 1344566777888877 999999
Q ss_pred cCeEeccCCChhhHHHHHHc
Q 023845 126 QGRVQCQGNDQDGMLSAIAN 145 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~~ 145 (276)
||+.. .| ...+..++.+
T Consensus 58 ~g~~i-~g--~~~i~~~~~~ 74 (82)
T 1fov_A 58 DAQHI-GG--YDDLYALDAR 74 (82)
T ss_dssp TTEEE-ES--HHHHHHHHHT
T ss_pred CCEEE-eC--HHHHHHHHHC
Confidence 99754 43 3556665554
No 30
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.64 E-value=0.00014 Score=62.12 Aligned_cols=83 Identities=13% Similarity=0.229 Sum_probs=62.8
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.+++++|..|++.+|++|+.....+.+++.++ ++|....++++- ....++++++.+
T Consensus 134 ~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~----~~v~~~~vd~~~------------------~~~l~~~~~v~~-- 189 (229)
T 2ywm_A 134 VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN----DYITSKVIDASE------------------NQDLAEQFQVVG-- 189 (229)
T ss_dssp CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC----TTEEEEEEEGGG------------------CHHHHHHTTCCS--
T ss_pred cCCCeEEEEEECCCCcchHHHHHHHHHHHHHC----CCeEEEEEECCC------------------CHHHHHHcCCcc--
Confidence 45678788999999999999999999998864 478777777651 234678899988
Q ss_pred cceEEEcCeEe-ccCC-ChhhHHHHHHcC
Q 023845 120 TPQLVFQGRVQ-CQGN-DQDGMLSAIANA 146 (276)
Q Consensus 120 TPq~vVnG~~~-~~g~-~~~~~~~~i~~~ 146 (276)
+|++++||+.. ..|. +.+.+...|.+.
T Consensus 190 ~Pt~~~~G~~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 190 VPKIVINKGVAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp SSEEEEGGGTEEEESCCCHHHHHHHHHHH
T ss_pred cCEEEECCEEEEeeCCCCHHHHHHHHHHH
Confidence 99999999843 3443 355666666543
No 31
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.62 E-value=0.00012 Score=54.54 Aligned_cols=82 Identities=12% Similarity=0.169 Sum_probs=57.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++.+++ .+++..+.+++|- .....+++++.. +
T Consensus 19 ~~~~lv-~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 74 (107)
T 1dby_A 19 SVPVLV-DFWAPWCGPCRIIAPVVDEIAGEY---KDKLKCVKLNTDE------------------SPNVASEYGIRS--I 74 (107)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTCEEEEEETTT------------------CHHHHHHHTCCS--S
T ss_pred CCcEEE-EEECCCCHhHHHHHHHHHHHHHHh---CCceEEEEEECCC------------------CHHHHHHCCCCc--C
Confidence 345555 667899999999999999998865 3457666666541 235677889887 9
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~~ 146 (276)
|++++ ||+.. ..|. +.+.+...|++.
T Consensus 75 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 75 PTIMVFKGGKKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp CEEEEESSSSEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 99988 88763 2343 466777777653
No 32
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.60 E-value=0.00026 Score=60.04 Aligned_cols=100 Identities=16% Similarity=0.165 Sum_probs=68.8
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccC-------------CC--C-------------
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDY-------------MG--W------------- 93 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDy-------------lG--W------------- 93 (276)
.++.|..|++-.|++|-..+..|.++.++++ ++|+-.-+|+++=+. +| |
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~---~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~~~lf~a~~ 100 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFK---DDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMV 100 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCC---TTEEEEEEECCCSGGGHHHHHHHHHHHHHTGGGHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCC---CCeEEEEecCCCCcccHHHHHHHHHHHHcCchhHHhHHHHHHHHHH
Confidence 4577778889999999999999999998763 468777777752110 01 1
Q ss_pred --CCCCCCc----------------c------------ccHHHHHHHHHhCCCCCCcceEEEcCeEeccCCChhhHHHHH
Q 023845 94 --KDPYGSS----------------Q------------WTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAI 143 (276)
Q Consensus 94 --kD~fa~~----------------~------------~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i 143 (276)
...++++ . ..++...+++.+|+.+ ||+++|||+....+.+.+.+...|
T Consensus 101 ~~~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~g--tPt~vvng~~~~~~~~~e~l~~~i 178 (193)
T 3hz8_A 101 NQKIKLQNPEVLKKWLGEQTAFDGKKVLAAYESPESQARADKMQELTETFQIDG--VPTVIVGGKYKVEFADWESGMNTI 178 (193)
T ss_dssp TSCCCTTSHHHHHHHHHHCTTTTHHHHHHHHHSHHHHHHHHHHHHHHHHTTCCS--SSEEEETTTEEECCSSHHHHHHHH
T ss_pred HhCcCCCCHHHHHHHHHHccCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhCCCc--CCEEEECCEEEecCCCHHHHHHHH
Confidence 1111111 1 1123456678889888 999999999888777777777777
Q ss_pred HcC
Q 023845 144 ANA 146 (276)
Q Consensus 144 ~~~ 146 (276)
+..
T Consensus 179 ~~l 181 (193)
T 3hz8_A 179 DLL 181 (193)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 33
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.57 E-value=0.00042 Score=51.55 Aligned_cols=81 Identities=15% Similarity=0.251 Sum_probs=57.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++ =+|++.+|++|-.....|.++++++ .+++..+.++++- . ....+++++.. +
T Consensus 20 ~~~~~-v~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~-----------~-------~~~~~~~~v~~--~ 75 (108)
T 2trx_A 20 DGAIL-VDFWAEWCGPCKMIAPILDEIADEY---QGKLTVAKLNIDQ-----------N-------PGTAPKYGIRG--I 75 (108)
T ss_dssp SSEEE-EEEECTTCHHHHHHHHHHHHHHHHT---TTTEEEEEEETTT-----------C-------TTHHHHTTCCS--S
T ss_pred CCeEE-EEEECCCCHhHHHHHHHHHHHHHHh---CCCcEEEEEECCC-----------C-------HHHHHHcCCcc--c
Confidence 34444 4677899999999999999999875 3467777776652 1 13567788887 9
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~ 145 (276)
|++++ ||+... .|. +.+.+.+.|++
T Consensus 76 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 105 (108)
T 2trx_A 76 PTLLLFKNGEVAATKVGALSKGQLKEFLDA 105 (108)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEecCCCHHHHHHHHHH
Confidence 99988 898642 343 46677776654
No 34
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.57 E-value=0.0002 Score=59.79 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=67.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------------------ccC----------
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------------------WDY---------- 90 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------------------WDy---------- 90 (276)
+.++.|..|++-.||+|=..+..|.+|.+++ .++|.-.-+|+.+ |.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~---~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~ 100 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKL---PADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHK 100 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTC---CTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhC---CCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3467888899999999999999999999876 3477777777752 211
Q ss_pred --CCCCCC--------------------CCCcc---ccHHHHHHHHHhCCCCCCcceEEEcCeEecc--C-CChhhHHHH
Q 023845 91 --MGWKDP--------------------YGSSQ---WTVRQKAYVEALNLDTMFTPQLVFQGRVQCQ--G-NDQDGMLSA 142 (276)
Q Consensus 91 --lGWkD~--------------------fa~~~---~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~--g-~~~~~~~~~ 142 (276)
..|.|. +.+++ ..++....++.+|+.+ ||+++|||+.... | .+.+.+...
T Consensus 101 ~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g--tPt~~vng~~~~~~~G~~~~e~l~~~ 178 (192)
T 3h93_A 101 EHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTG--VPTMVVNGKYRFDIGSAGGPEETLKL 178 (192)
T ss_dssp SCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCS--SSEEEETTTEEEEHHHHTSHHHHHHH
T ss_pred hCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCC--CCeEEECCEEEecccccCCHHHHHHH
Confidence 111110 11111 1234455678889888 9999999997763 3 356777777
Q ss_pred HHcC
Q 023845 143 IANA 146 (276)
Q Consensus 143 i~~~ 146 (276)
|...
T Consensus 179 i~~l 182 (192)
T 3h93_A 179 ADYL 182 (192)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 35
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.56 E-value=8.8e-05 Score=58.67 Aligned_cols=66 Identities=20% Similarity=0.184 Sum_probs=44.7
Q ss_pred EEEecCCCCCCCHHH-HHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 46 VELFSSQGCKTSPEA-EILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 46 VElFTSqGCssCP~A-d~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
|.+|++.+|+.|..| .++|.++... ++-...+.+| .++...+.+....+.+|.++ +|+++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~~------~i~~~~vdid-----------~~~~~~~~~~~l~~~~g~~t--vP~vf 87 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKVP------RSKVLVLQLN-----------DMKEGADIQAALYEINGQRT--VPNIY 87 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCCC------GGGEEEEEGG-----------GSTTHHHHHHHHHHHHSCCS--SCEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCCC------CCCeEEEECc-----------cCCChHHHHHHHHHHhCCCC--cCEEE
Confidence 667999999999999 9999876521 1111223333 12222345566777888877 99999
Q ss_pred EcCeEe
Q 023845 125 FQGRVQ 130 (276)
Q Consensus 125 VnG~~~ 130 (276)
|||+..
T Consensus 88 i~g~~i 93 (118)
T 3c1r_A 88 INGKHI 93 (118)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 999864
No 36
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.55 E-value=0.00042 Score=57.56 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=67.2
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------------------ccCC--------CC
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------------------WDYM--------GW 93 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------------------WDyl--------GW 93 (276)
.++.|..|++-.||+|=.+...|.+|.+++ ..+|.-.-+++.+ |.+. .|
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~---~~~v~~~~~p~~~~~~s~~a~~a~~~a~~~~~~~~~~~~lf~~~~~~ 101 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQ---AKDVRFTLVPAVFGGVWDPFARAYLAADVLGVAKRSHTAMFEAIHEK 101 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTS---CTTEEEEEEECCCSTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhc---CCceEEEEeCcccCCCcHHHHHHHHHHHHcCcHHHHHHHHHHHHHHh
Confidence 357778899999999999999999998876 2366555555531 1100 00
Q ss_pred C---CCCCCc---------------------------cccHHHHHHHHHhCCCCCCcceEEEcCeEeccCCChhhHHHHH
Q 023845 94 K---DPYGSS---------------------------QWTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAI 143 (276)
Q Consensus 94 k---D~fa~~---------------------------~~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i 143 (276)
. +...++ ...+....+++.+|+.+ ||+++|||+....|.+.+.+...|
T Consensus 102 ~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g--tPt~ving~~~~~g~~~~~l~~~i 179 (193)
T 2rem_A 102 GSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYALKVRPVG--TPTIVVNGRYMVTGHDFEDTLRIT 179 (193)
T ss_dssp CCSCSTTCCHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHCCSS--SSEEEETTTEEECCSSHHHHHHHH
T ss_pred cccCcCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHhCCCC--CCeEEECCEEEecCCCHHHHHHHH
Confidence 0 011111 12333456778889988 999999999876776777888777
Q ss_pred HcCC
Q 023845 144 ANAP 147 (276)
Q Consensus 144 ~~~~ 147 (276)
....
T Consensus 180 ~~~~ 183 (193)
T 2rem_A 180 DYLV 183 (193)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7543
No 37
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.55 E-value=0.00019 Score=53.16 Aligned_cols=82 Identities=20% Similarity=0.292 Sum_probs=57.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++| .|++.+|++|-.....|.++++++ .+++..+.+++|- .....+++++.. +
T Consensus 17 ~~~~~v-~f~~~~C~~C~~~~~~l~~~~~~~---~~~v~~~~v~~~~------------------~~~~~~~~~v~~--~ 72 (105)
T 1nsw_A 17 DGPVLV-DFWAAWCGPCRMMAPVLEEFAEAH---ADKVTVAKLNVDE------------------NPETTSQFGIMS--I 72 (105)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHS---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCcEEE-EEECCCCHHHHHHHHHHHHHHHHh---cCCcEEEEEECcC------------------CHHHHHHcCCcc--c
Confidence 445555 577899999999999999998875 3456666666541 134677889887 9
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~~ 146 (276)
|++++ ||+... .|. +.+.+...|.+.
T Consensus 73 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeEEEEEecCCCHHHHHHHHHHH
Confidence 99988 897642 343 356666666543
No 38
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.55 E-value=0.00018 Score=53.90 Aligned_cols=82 Identities=23% Similarity=0.298 Sum_probs=60.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||. |++.+|++|-.....|.++.+++ .+++..+.+++|- .....+.+++.. +
T Consensus 24 ~~~~vv~-f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~vd~~~------------------~~~~~~~~~v~~--~ 79 (112)
T 1ep7_A 24 HKPIVVD-FTATWCGPCKMIAPLFETLSNDY---AGKVIFLKVDVDA------------------VAAVAEAAGITA--M 79 (112)
T ss_dssp TCCEEEE-EECTTCHHHHHHHHHHHHHHHHT---TTTSEEEEEETTT------------------THHHHHHHTCCB--S
T ss_pred CCeEEEE-EECCCCHHHHHHHHHHHHHHHHc---CCCeEEEEEECCc------------------hHHHHHHcCCCc--c
Confidence 4566665 66789999999999999998875 3367777776651 245677888887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
|++++ ||+.. ..|.+.+.+...|++.
T Consensus 80 Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~ 109 (112)
T 1ep7_A 80 PTFHVYKDGVKADDLVGASQDKLKALVAKH 109 (112)
T ss_dssp SEEEEEETTEEEEEEESCCHHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEcCCCHHHHHHHHHHH
Confidence 99988 88763 3555777777777653
No 39
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.53 E-value=0.0002 Score=55.06 Aligned_cols=73 Identities=19% Similarity=0.295 Sum_probs=47.6
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh-CCCCCCcce
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL-NLDTMFTPQ 122 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~-g~~~vYTPq 122 (276)
.-|.+||..+|+.|-.|.++|.++.-.+ . .+.|+ .++ +.+..+.+.. |.++ +|+
T Consensus 16 ~~v~vy~~~~Cp~C~~ak~~L~~~~i~y-----~----~idI~-----------~~~---~~~~~l~~~~~g~~~--vP~ 70 (99)
T 3qmx_A 16 AKIEIYTWSTCPFCMRALALLKRKGVEF-----Q----EYCID-----------GDN---EAREAMAARANGKRS--LPQ 70 (99)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHHTCCC-----E----EEECT-----------TCH---HHHHHHHHHTTTCCC--SCE
T ss_pred CCEEEEEcCCChhHHHHHHHHHHCCCCC-----E----EEEcC-----------CCH---HHHHHHHHHhCCCCC--CCE
Confidence 3577999999999999999999986532 1 12332 222 2334455555 7666 999
Q ss_pred EEEcCeEeccCCChhhHHHHHH
Q 023845 123 LVFQGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 123 ~vVnG~~~~~g~~~~~~~~~i~ 144 (276)
++|||+.. +| .+.+..+..
T Consensus 71 ifi~g~~i-gG--~d~l~~~~~ 89 (99)
T 3qmx_A 71 IFIDDQHI-GG--CDDIYALDG 89 (99)
T ss_dssp EEETTEEE-ES--HHHHHHHHH
T ss_pred EEECCEEE-eC--hHHHHHHHH
Confidence 99999744 44 344444443
No 40
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.53 E-value=0.00016 Score=53.48 Aligned_cols=80 Identities=20% Similarity=0.304 Sum_probs=58.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ +++..+.+++| ....+.+.+++.+ +
T Consensus 20 ~~~~~v-~f~~~~C~~C~~~~~~~~~~~~~~----~~~~~~~vd~~------------------~~~~~~~~~~v~~--~ 74 (105)
T 3m9j_A 20 DKLVVV-DFSATWCGPCKMIKPFFHSLSEKY----SNVIFLEVDVD------------------DCQDVASESEVKS--M 74 (105)
T ss_dssp TSCEEE-EEECTTCHHHHHHHHHHHHHHHHS----TTSEEEEEETT------------------TCHHHHHHTTCCB--S
T ss_pred CCeEEE-EEECCCChhhHHHHHHHHHHHHHc----cCeEEEEEEhh------------------hhHHHHHHcCCCc--C
Confidence 444555 566789999999999999999875 35666666554 1245678899888 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|.+.+.+...|.+
T Consensus 75 Pt~~~~~~g~~~~~~~g~~~~~l~~~l~~ 103 (105)
T 3m9j_A 75 PTFQFFKKGQKVGEFSGANKEKLEATINE 103 (105)
T ss_dssp SEEEEEETTEEEEEEESSCHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEeCCCHHHHHHHHHH
Confidence 99888 88764 356677777777764
No 41
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.53 E-value=0.00044 Score=51.76 Aligned_cols=80 Identities=15% Similarity=0.211 Sum_probs=58.2
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
.+|-.|++.+|++|-.....|.++++.+ .+++..+.+++|- .....+.+++.. +|++
T Consensus 27 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~---~~~v~~~~v~~~~------------------~~~~~~~~~v~~--~Pt~ 83 (115)
T 1thx_A 27 PVLVYFWASWCGPCQLMSPLINLAANTY---SDRLKVVKLEIDP------------------NPTTVKKYKVEG--VPAL 83 (115)
T ss_dssp CEEEEEECTTCTTHHHHHHHHHHHHHHT---TTTCEEEEEESTT------------------CHHHHHHTTCCS--SSEE
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHh---CCcEEEEEEEcCC------------------CHHHHHHcCCCc--eeEE
Confidence 4455566789999999999999998865 3457777776651 135677889887 9999
Q ss_pred EE--cCeEec--cCC-ChhhHHHHHHcC
Q 023845 124 VF--QGRVQC--QGN-DQDGMLSAIANA 146 (276)
Q Consensus 124 vV--nG~~~~--~g~-~~~~~~~~i~~~ 146 (276)
++ ||+... .|. +.+.+.+.|++.
T Consensus 84 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 84 RLVKGEQILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEcCCEEEEEecCCCCHHHHHHHHHHH
Confidence 88 898643 343 567777777654
No 42
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.53 E-value=0.00026 Score=52.22 Aligned_cols=85 Identities=14% Similarity=0.184 Sum_probs=61.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.+++++| .|++.+|++|-.....|.++.+++ .+++..+.+++|- .....+.+++..
T Consensus 17 ~~~~~lv-~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~-- 72 (109)
T 2yzu_A 17 QHPLVLV-DFWAEWCAPCRMIAPILEEIAKEY---EGKLLVAKLDVDE------------------NPKTAMRYRVMS-- 72 (109)
T ss_dssp HCSEEEE-EEECTTCHHHHHHHHHHHHHHHHT---BTTBEEEEEETTT------------------CHHHHHHTTCCS--
T ss_pred CCCeEEE-EEECCCCHHHHHhhHHHHHHHHHh---hCceEEEEEECCC------------------CHhHHHhCCCCc--
Confidence 3456666 566889999999999999998865 3367777777652 134677889887
Q ss_pred cceEEE--cCeEe--ccCC-ChhhHHHHHHcCCC
Q 023845 120 TPQLVF--QGRVQ--CQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~-~~~~~~~~i~~~~~ 148 (276)
+|++++ ||+.. ..|. +.+.+.+.|++...
T Consensus 73 ~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 73 IPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred CCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 999988 89864 2343 46788888887653
No 43
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.53 E-value=0.00015 Score=56.84 Aligned_cols=88 Identities=11% Similarity=0.212 Sum_probs=59.0
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|++|-.....|.++.+++.....+|..+.++++- .....+++++..
T Consensus 33 ~~~~vlv-~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~------------------~~~~~~~~~v~~-- 91 (140)
T 2dj1_A 33 DKDTVLL-EFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS------------------ASMLASKFDVSG-- 91 (140)
T ss_dssp TCSEEEE-EECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT------------------CHHHHHHTTCCS--
T ss_pred cCCeEEE-EEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc------------------cHHHHHHCCCCc--
Confidence 3445555 6778999999888888888876542112347776665541 145678889887
Q ss_pred cceEEE--cCeEec-cC-CChhhHHHHHHcCCC
Q 023845 120 TPQLVF--QGRVQC-QG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 120 TPq~vV--nG~~~~-~g-~~~~~~~~~i~~~~~ 148 (276)
+|++++ ||+... .| .+.+.+...|.+...
T Consensus 92 ~Pt~~~~~~G~~~~~~g~~~~~~l~~~l~~~~~ 124 (140)
T 2dj1_A 92 YPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQ 124 (140)
T ss_dssp SSEEEEEETTEEEECCSCCCHHHHHHHHHHHHS
T ss_pred cCeEEEEECCcEEEcCCCCCHHHHHHHHHHhcC
Confidence 999888 887322 33 356778888876554
No 44
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.52 E-value=0.00027 Score=52.23 Aligned_cols=82 Identities=21% Similarity=0.285 Sum_probs=58.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ .+++..+.++++- . ....+.+++.. +
T Consensus 20 ~~~~lv-~f~~~~C~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~~-----------~-------~~~~~~~~v~~--~ 75 (107)
T 2i4a_A 20 SGLVLV-DFWAEWCGPCKMIGPALGEIGKEF---AGKVTVAKVNIDD-----------N-------PETPNAYQVRS--I 75 (107)
T ss_dssp SSEEEE-EEECTTCHHHHHHHHHHHHHHHHH---TTSEEEEEEETTT-----------C-------CHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCChhHHHHhHHHHHHHHHh---CCcEEEEEEECCC-----------C-------HHHHHhcCCCc--c
Confidence 345554 566899999999999999998865 3468777777652 1 24577788887 9
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~~ 146 (276)
|++++ ||+... .|. +.+.+...|++.
T Consensus 76 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 76 PTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred CEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 99988 998753 343 567777777653
No 45
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.52 E-value=9.7e-05 Score=57.57 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=47.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
.|.+|++.+|+.|..+..+|.++...+ +++ ..+.+| .++...+.+....+.+|.++ +|+++
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~----~~~--~~vdi~-----------~~~~~~~~~~~l~~~~g~~~--vP~v~ 80 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR----GAY--EIVDIK-----------EFKPENELRDYFEQITGGKT--VPRIF 80 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT----TSE--EEEEGG-----------GSSSHHHHHHHHHHHHSCCS--SCEEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc----Cce--EEEEcc-----------CCCChHHHHHHHHHHhCCCC--cCEEE
Confidence 367899999999999999999876542 222 224443 12222355567778889887 99999
Q ss_pred EcCeEe
Q 023845 125 FQGRVQ 130 (276)
Q Consensus 125 VnG~~~ 130 (276)
+||+..
T Consensus 81 i~g~~i 86 (114)
T 2hze_A 81 FGKTSI 86 (114)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 999764
No 46
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.52 E-value=0.00049 Score=56.51 Aligned_cols=99 Identities=12% Similarity=0.070 Sum_probs=60.8
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-----------------------cc---------
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-----------------------WD--------- 89 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-----------------------WD--------- 89 (276)
.++.|+.|++-.||+|=.....|.++.+++.+ .++|-..-.|+.. |.
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~lf~~~ 105 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVK-SGKVERIIKLFDKEKESLQRGNVMHHYIDYSAPEQALSALHKMFATQ 105 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHH-TTSEEEEEEECCCCSTTTHHHHHHHTTCCTTCHHHHHHHHHHHHHTH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhh-CCcEEEEEEeCCCCcccHHHHHHHHHHHHhcChHHHHHHHHHHHHcC
Confidence 46888899999999998888766666543200 1245444444431 00
Q ss_pred -----------------CCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEEcCeEeccCCChhhHHHHHH
Q 023845 90 -----------------YMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 90 -----------------ylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i~ 144 (276)
.+|.... ..+...++...+++.+|+.+ ||.++|||+...+..+.+.+..+|.
T Consensus 106 ~~~~~~~~~~l~~~a~~~~Gld~~-~~~~~~~~~~~~a~~~gv~g--tPt~vvng~~~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 106 DEWGNLTLEEVATYAEKNLGLKEQ-KDATLVSAVIAEANAAHIQF--VPTIIIGEYIFDESVTEEELRGYIE 174 (175)
T ss_dssp HHHTTSCHHHHHHHHHHTSCCCCC-CCHHHHHHHHHHHHHHTCCS--SCEEEETTEEECTTCCHHHHHHHHT
T ss_pred hhhccCCHHHHHHHHHHhcCCCcc-cCHHHHHHHHHHHHHcCCCC--cCeEEECCEEccCCCCHHHHHHHhc
Confidence 0111000 11223345567788899988 9999999986544445777777664
No 47
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=97.52 E-value=0.00025 Score=55.43 Aligned_cols=81 Identities=21% Similarity=0.339 Sum_probs=60.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++.+++ ++|..+.+.+| .....++++++.. +
T Consensus 38 ~k~vvv-~f~a~wC~~C~~~~~~l~~l~~~~----~~v~~~~vd~d------------------~~~~l~~~~~v~~--~ 92 (124)
T 1xfl_A 38 KTLVVV-DFTASWCGPCRFIAPFFADLAKKL----PNVLFLKVDTD------------------ELKSVASDWAIQA--M 92 (124)
T ss_dssp TCEEEE-EEECTTCHHHHHHHHHHHHHHHHC----SSEEEEEEETT------------------TSHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHHHHHHHHHHHC----CCcEEEEEECc------------------cCHHHHHHcCCCc--c
Confidence 445555 566789999999999999999875 36777776664 1245678899887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
|++++ ||+.. ..|.+.+.+...|.+.
T Consensus 93 Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVGAKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTEEEEEEESCCHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCCCHHHHHHHHHHh
Confidence 99988 88764 3566777787777653
No 48
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.51 E-value=0.00027 Score=52.07 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=56.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ .+++..+.++++- .....+++++.. +
T Consensus 18 ~~~~~v-~f~~~~C~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 73 (105)
T 1fb6_A 18 EVPVMV-DFWAPWCGPCKLIAPVIDELAKEY---SGKIAVYKLNTDE------------------APGIATQYNIRS--I 73 (105)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCcEEE-EEECCCChHHHHHHHHHHHHHHHh---cCceEEEEEcCcc------------------hHHHHHhCCCCc--c
Confidence 445555 566799999999999999998865 3456666665541 135678889887 9
Q ss_pred ceEEE--cCeEec--cC-CChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQC--QG-NDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g-~~~~~~~~~i~~ 145 (276)
|++++ ||+... .| .+.+.+...|++
T Consensus 74 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 74 PTVLFFKNGERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp SEEEEEETTEEEEEEEECCCHHHHHHHHHH
T ss_pred cEEEEEeCCeEEEEEecCCCHHHHHHHHHh
Confidence 99988 887643 33 346667777654
No 49
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.50 E-value=0.00014 Score=57.04 Aligned_cols=24 Identities=4% Similarity=0.112 Sum_probs=21.3
Q ss_pred EEEEecCCCCCCCH------HHHHHHHHhc
Q 023845 45 LVELFSSQGCKTSP------EAEILVSRLG 68 (276)
Q Consensus 45 vVElFTSqGCssCP------~Ad~~l~~l~ 68 (276)
-|.+||+.+|++|- .|.++|.++.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~g 38 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEANK 38 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHcC
Confidence 47799999999999 8999999754
No 50
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=97.50 E-value=0.00035 Score=52.51 Aligned_cols=73 Identities=10% Similarity=0.112 Sum_probs=45.7
Q ss_pred EEEecCCCCCCC------HHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 46 VELFSSQGCKTS------PEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 46 VElFTSqGCssC------P~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
|.+||+.+|++| -.|.++|.+..-.+ -.++++ .++ +.+....+..|.....
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~---------~~~di~-----------~~~---~~~~~l~~~~g~~~~~ 60 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGKRIQY---------QLVDIS-----------QDN---ALRDEMRTLAGNPKAT 60 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHTTCCC---------EEEETT-----------SCH---HHHHHHHHHTTCTTCC
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHCCCce---------EEEECC-----------CCH---HHHHHHHHHhCCCCCC
Confidence 789999999999 89999999764321 012222 222 3334455556632334
Q ss_pred cceEEEcCeEeccCCChhhHHHHHH
Q 023845 120 TPQLVFQGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 120 TPq~vVnG~~~~~g~~~~~~~~~i~ 144 (276)
+||++|||+. ++| .+.+.++..
T Consensus 61 vP~ifi~g~~-igG--~d~l~~l~~ 82 (93)
T 1t1v_A 61 PPQIVNGNHY-CGD--YELFVEAVE 82 (93)
T ss_dssp SCEEEETTEE-EEE--HHHHHHHHH
T ss_pred CCEEEECCEE-EeC--HHHHHHHHh
Confidence 9999999974 444 355555444
No 51
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.50 E-value=5.7e-05 Score=61.04 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=45.1
Q ss_pred EEEecCCCCCCCHHH-HHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 46 VELFSSQGCKTSPEA-EILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 46 VElFTSqGCssCP~A-d~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
|.+|+..+|+.|..| .++|.++.... .++ -.+.|| ..+...+.+....+..|.++ +|+++
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~~----i~~--~~vdvd-----------~~~~~~~~~~~L~~~~g~~t--VP~vf 99 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVPK----SKA--LVLELD-----------EMSNGSEIQDALEEISGQKT--VPNVY 99 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCCG----GGE--EEEEGG-----------GSTTHHHHHHHHHHHHSCCS--SCEEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCccC----CCc--EEEEcc-----------ccCCHHHHHHHHHHHhCCCC--CCEEE
Confidence 679999999999999 99999876311 121 123333 11222345566777788877 99999
Q ss_pred EcCeEe
Q 023845 125 FQGRVQ 130 (276)
Q Consensus 125 VnG~~~ 130 (276)
|||+..
T Consensus 100 i~g~~i 105 (129)
T 3ctg_A 100 INGKHI 105 (129)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 999754
No 52
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.49 E-value=0.00033 Score=53.13 Aligned_cols=83 Identities=14% Similarity=0.218 Sum_probs=60.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|+.|-.....|.++.+++ ++|..+.++++- .....+++++..
T Consensus 25 ~~k~vlv-~f~a~~C~~C~~~~~~l~~l~~~~----~~v~~~~vd~~~------------------~~~~~~~~~v~~-- 79 (112)
T 1syr_A 25 QNELVIV-DFFAEWCGPCKRIAPFYEECSKTY----TKMVFIKVDVDE------------------VSEVTEKENITS-- 79 (112)
T ss_dssp HCSEEEE-EEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------THHHHHHTTCCS--
T ss_pred cCCeEEE-EEECCCCHHHHHHHHHHHHHHHHc----CCCEEEEEECCC------------------CHHHHHHcCCCc--
Confidence 3455555 566889999999999999998864 356666666541 135678889887
Q ss_pred cceEEE--cCeEe--ccCCChhhHHHHHHcCC
Q 023845 120 TPQLVF--QGRVQ--CQGNDQDGMLSAIANAP 147 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~~~~~~~~~i~~~~ 147 (276)
+|++++ ||+.. ..|.+.+.+...|.+.+
T Consensus 80 ~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 111 (112)
T 1syr_A 80 MPTFKVYKNGSSVDTLLGANDSALKQLIEKYA 111 (112)
T ss_dssp SSEEEEEETTEEEEEEESCCHHHHHHHHHTTC
T ss_pred ccEEEEEECCcEEEEEeCCCHHHHHHHHHHhh
Confidence 999888 88763 34557788888887643
No 53
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.49 E-value=0.00043 Score=55.22 Aligned_cols=101 Identities=13% Similarity=0.155 Sum_probs=66.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-------------ccCCCCCCCCCCccccHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-------------WDYMGWKDPYGSSQWTVRQ 106 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-------------WDylGWkD~fa~~~~t~Rq 106 (276)
.++++||..| +.+|++|......|.+|.+++. .++|..+++++|- ....+|. + -+...+..
T Consensus 37 ~gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~--~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~d~~ 110 (164)
T 2h30_A 37 KDKPTLIKFW-ASWCPLCLSELGQAEKWAQDAK--FSSANLITVASPGFLHEKKDGEFQKWYAGLNYP--K-LPVVTDNG 110 (164)
T ss_dssp TTSCEEEEEC-CTTCHHHHHHHHHHHHHHTCGG--GTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT--T-SCEEECTT
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcc--cCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC--c-ceEEEcCc
Confidence 3456777666 8999999999999999998753 3457777777652 1112222 0 12233334
Q ss_pred HHHHHHhCCCCCCcceEEE---cCeEec--cC-CChhhHHHHHHcCCC
Q 023845 107 KAYVEALNLDTMFTPQLVF---QGRVQC--QG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vV---nG~~~~--~g-~~~~~~~~~i~~~~~ 148 (276)
...++.+++.. +|+++| ||+... .| .+.+.+...|++.+.
T Consensus 111 ~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 111 GTIAQNLNISV--YPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp CHHHHHTTCCS--SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred hHHHHHcCCCc--cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56677888876 999765 576543 24 467888888887664
No 54
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=97.48 E-value=0.00016 Score=54.58 Aligned_cols=83 Identities=22% Similarity=0.349 Sum_probs=61.4
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||. |++.+|+.|-.....|.++.+++ +++..+.+++|- .....+.+++.. +
T Consensus 28 ~~~~vv~-f~~~~C~~C~~~~~~l~~~~~~~----~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 82 (118)
T 2vm1_A 28 GKLVIID-FTASWCGPCRVIAPVFAEYAKKF----PGAIFLKVDVDE------------------LKDVAEAYNVEA--M 82 (118)
T ss_dssp TCCEEEE-EECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------SHHHHHHTTCCS--B
T ss_pred CCEEEEE-EECCCCHhHHHHhHHHHHHHHHC----CCcEEEEEEccc------------------CHHHHHHcCCCc--C
Confidence 4566665 66789999999999999998865 367766666641 245678889887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHcCCC
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIANAPK 148 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~~~~ 148 (276)
|++++ ||+.. ..|.+.+.+...|.+...
T Consensus 83 Pt~~~~~~g~~~~~~~g~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 83 PTFLFIKDGEKVDSVVGGRKDDIHTKIVALMG 114 (118)
T ss_dssp SEEEEEETTEEEEEEESCCHHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEEEecCCCHHHHHHHHHHHhc
Confidence 99988 88764 456677788888876543
No 55
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.48 E-value=4.3e-05 Score=60.62 Aligned_cols=75 Identities=17% Similarity=0.239 Sum_probs=51.5
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
...|.+||..+|+.|-.+.++|.+++++. +|-..-+.|| .+ ...+.++|++ +|+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~-----~i~~~~vDId-----------~d-------~~l~~~ygv~---VP~ 82 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS-----WFELEVINID-----------GN-------EHLTRLYNDR---VPV 82 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS-----CCCCEEEETT-----------TC-------HHHHHHSTTS---CSE
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc-----CCeEEEEECC-----------CC-------HHHHHHhCCC---Cce
Confidence 45799999999999999999999998754 2222223333 11 2345667753 999
Q ss_pred E--EEcCeEeccC-CChhhHHHHH
Q 023845 123 L--VFQGRVQCQG-NDQDGMLSAI 143 (276)
Q Consensus 123 ~--vVnG~~~~~g-~~~~~~~~~i 143 (276)
+ ++||+....| -+++.+.+.|
T Consensus 83 l~~~~dG~~v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 83 LFAVNEDKELCHYFLDSDVIGAYL 106 (107)
T ss_dssp EEETTTTEEEECSSCCCHHHHHHH
T ss_pred EEEEECCEEEEecCCCHHHHHHHh
Confidence 9 7899887444 3566666654
No 56
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.48 E-value=0.00029 Score=52.89 Aligned_cols=81 Identities=15% Similarity=0.241 Sum_probs=56.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++.+++ .+++..+.+++|- .....+++++.. +
T Consensus 23 ~~~~vv-~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 78 (112)
T 1t00_A 23 DKPVLV-DFWAAWCGPCRQIAPSLEAIAAEY---GDKIEIVKLNIDE------------------NPGTAAKYGVMS--I 78 (112)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCeEEE-EEECCCCHhHHhcCHHHHHHHHHh---cCCeEEEEEEcCC------------------CHHHHHhCCCCc--c
Confidence 345554 667899999999999999998875 3467776666651 135678889887 9
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|. +.+.+.+.|++
T Consensus 79 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 108 (112)
T 1t00_A 79 PTLNVYQGGEVAKTIVGAKPKAAIVRDLED 108 (112)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTHH
T ss_pred cEEEEEeCCEEEEEEeCCCCHHHHHHHHHH
Confidence 99888 88764 2343 35666666654
No 57
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00047 Score=51.85 Aligned_cols=82 Identities=12% Similarity=0.257 Sum_probs=56.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++.+++. .+++..+.++++- .....+.+++.+ +
T Consensus 21 ~~~~~v-~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~~~vd~~~------------------~~~~~~~~~v~~--~ 77 (112)
T 3d6i_A 21 DKLIVL-YFHTSWAEPCKALKQVFEAISNEPS--NSNVSFLSIDADE------------------NSEISELFEISA--V 77 (112)
T ss_dssp TCCEEE-EEECCC--CHHHHHHHHHHHHHCGG--GTTSEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHHHHHHHHHHhcC--CCCEEEEEEeccc------------------CHHHHHHcCCCc--c
Confidence 445555 5777899999999999999988631 2467777776651 135678899887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|....++...|.+
T Consensus 78 Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 106 (112)
T 3d6i_A 78 PYFIIIHKGTILKELSGADPKEYVSLLED 106 (112)
T ss_dssp SEEEEEETTEEEEEECSCCHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEecCCCHHHHHHHHHH
Confidence 99888 88764 346566667776664
No 58
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.47 E-value=0.00028 Score=54.33 Aligned_cols=81 Identities=16% Similarity=0.218 Sum_probs=59.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++.+++ .++|..+.+.+|- ....++.+++.. +
T Consensus 31 ~k~vlv-~f~a~~C~~C~~~~~~l~~~~~~~---~~~v~~~~vd~d~------------------~~~l~~~~~v~~--~ 86 (119)
T 1w4v_A 31 ETPVVV-DFHAQWCGPCKILGPRLEKMVAKQ---HGKVVMAKVDIDD------------------HTDLAIEYEVSA--V 86 (119)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTSSEEEEEETTT------------------THHHHHHTTCCS--S
T ss_pred CCcEEE-EEECCCCHHHHHHHHHHHHHHHHh---cCCeEEEEEeCCC------------------CHHHHHHcCCCc--c
Confidence 455555 566899999999999999998865 3467777777651 235678899887 9
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|. +.+.+...|++
T Consensus 87 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 116 (119)
T 1w4v_A 87 PTVLAMKNGDVVDKFVGIKDEDQLEAFLKK 116 (119)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEEEcCCCCHHHHHHHHHH
Confidence 99988 89864 3454 56777777654
No 59
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.46 E-value=0.0003 Score=56.13 Aligned_cols=85 Identities=8% Similarity=0.171 Sum_probs=60.4
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
..++++||+ |++.+|++|-.....|.++++++ .+++..+.+++| ......+.+++.+
T Consensus 53 ~~~k~vlv~-F~a~wC~~C~~~~p~l~~~~~~~---~~~~~~~~vd~~------------------~~~~l~~~~~v~~- 109 (148)
T 3p2a_A 53 QDDLPMVID-FWAPWCGPCRSFAPIFAETAAER---AGKVRFVKVNTE------------------AEPALSTRFRIRS- 109 (148)
T ss_dssp TCSSCEEEE-EECSSCHHHHHHHHHHHHHHHHT---TTTCEEEEEETT------------------TCHHHHHHTTCCS-
T ss_pred hcCCcEEEE-EECCCCHHHHHHHHHHHHHHHHc---CCceEEEEEECc------------------CCHHHHHHCCCCc-
Confidence 344555555 55889999999999999999876 456777777665 1235678899988
Q ss_pred CcceEEE--cCeEec--cC-CChhhHHHHHHcCC
Q 023845 119 FTPQLVF--QGRVQC--QG-NDQDGMLSAIANAP 147 (276)
Q Consensus 119 YTPq~vV--nG~~~~--~g-~~~~~~~~~i~~~~ 147 (276)
+|++++ ||+... .| .+.+.+...|++..
T Consensus 110 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 110 -IPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp -SSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred -cCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHh
Confidence 899877 887542 33 35677777777654
No 60
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.45 E-value=0.00022 Score=54.50 Aligned_cols=98 Identities=14% Similarity=0.215 Sum_probs=61.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||..| +..|++|......|.++.+++ . ++..+.+++|- ....|+. +| +.+.+......+
T Consensus 24 ~~k~~ll~f~-~~~C~~C~~~~~~l~~~~~~~---~-~~~~~~v~~~~~~~~~~~~~~~~~~~-~~--~~~~d~~~~~~~ 95 (136)
T 1zzo_A 24 LGKPAVLWFW-APWCPTCQGEAPVVGQVAASH---P-EVTFVGVAGLDQVPAMQEFVNKYPVK-TF--TQLADTDGSVWA 95 (136)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC---T-TSEEEEEECSSCHHHHHHHHHHTTCT-TS--EEEECTTCHHHH
T ss_pred CCCeEEEEEE-cCCChhHHHHHHHHHHHHHHc---C-CeEEEEEeCCCCHHHHHHHHHHcCCC-ce--EEEEcCCcHHHH
Confidence 3456777655 889999999999999998875 2 67777777651 1111110 01 112222344567
Q ss_pred HhCCCCCCcceEEE---cCeEe-ccC-CChhhHHHHHHcCC
Q 023845 112 ALNLDTMFTPQLVF---QGRVQ-CQG-NDQDGMLSAIANAP 147 (276)
Q Consensus 112 ~~g~~~vYTPq~vV---nG~~~-~~g-~~~~~~~~~i~~~~ 147 (276)
.+++.. +|+++| ||+.. ..| .+.+.+...|.+.+
T Consensus 96 ~~~i~~--~P~~~~id~~g~i~~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 96 NFGVTQ--QPAYAFVDPHGNVDVVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HTTCCS--SSEEEEECTTCCEEEEESCCCHHHHHHHHHHHC
T ss_pred HcCCCC--CceEEEECCCCCEEEEecCCCHHHHHHHHHHHh
Confidence 788776 999776 78763 334 35777777776543
No 61
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.44 E-value=0.00039 Score=57.94 Aligned_cols=99 Identities=18% Similarity=0.300 Sum_probs=64.1
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------------------cc------------
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------------------WD------------ 89 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------------------WD------------ 89 (276)
.++.|..|++-.||+|=.....|.+|.+++ ..+|.-..+++.+ |.
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~---~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~ 98 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKAL---PSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQ 98 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHS---CTTEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHC---CCceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHh
Confidence 356777899999999988888888888765 3467777777642 10
Q ss_pred CCCCCC------------CCCCcc------------ccHHHHHHHHHhCCCCCCcceEEEcCeEeccCC-ChhhHHHHHH
Q 023845 90 YMGWKD------------PYGSSQ------------WTVRQKAYVEALNLDTMFTPQLVFQGRVQCQGN-DQDGMLSAIA 144 (276)
Q Consensus 90 ylGWkD------------~fa~~~------------~t~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~-~~~~~~~~i~ 144 (276)
...|.| .+..+. ..++....++.+|+.+ ||+++|||+..+.|. +.+.+...|.
T Consensus 99 ~~~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~g--tPt~ving~~~~~g~~~~~~l~~~i~ 176 (195)
T 2znm_A 99 KIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDS--TPTVIVGGKYRVIFNNGFDGGVHTIK 176 (195)
T ss_dssp SSCTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCS--SSEEEETTTEEECCCSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC--CCeEEECCEEEEcCCCCHHHHHHHHH
Confidence 111211 111111 2334566788889888 999999998756653 4556565555
Q ss_pred c
Q 023845 145 N 145 (276)
Q Consensus 145 ~ 145 (276)
+
T Consensus 177 ~ 177 (195)
T 2znm_A 177 E 177 (195)
T ss_dssp H
T ss_pred H
Confidence 4
No 62
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.44 E-value=0.00033 Score=53.39 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=57.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++| .|++.+|++|-.....|.++++++ ++..+.+++| ......+++++.. +
T Consensus 33 ~~~~vv-~f~a~wC~~C~~~~~~~~~~~~~~-----~~~~~~vd~~------------------~~~~~~~~~~v~~--~ 86 (117)
T 2xc2_A 33 NKLVVV-DFFATWCGPCKTIAPLFKELSEKY-----DAIFVKVDVD------------------KLEETARKYNISA--M 86 (117)
T ss_dssp TSCEEE-EEECTTCHHHHHHHHHHHHHHTTS-----SSEEEEEETT------------------TSHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCCHhHHHHhHHHHHHHHHc-----CcEEEEEECC------------------ccHHHHHHcCCCc--c
Confidence 445555 577789999999999999998853 5666666654 1245678889887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|.+.+.+...|++
T Consensus 87 Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 115 (117)
T 2xc2_A 87 PTFIAIKNGEKVGDVVGASIAKVEDMIKK 115 (117)
T ss_dssp SEEEEEETTEEEEEEESSCHHHHHHHHHH
T ss_pred ceEEEEeCCcEEEEEeCCCHHHHHHHHHH
Confidence 99888 88764 356667777777764
No 63
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.44 E-value=0.00076 Score=51.18 Aligned_cols=86 Identities=17% Similarity=0.244 Sum_probs=61.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|+.|-.....|.++++++ .+++..+.+++|- . ...++++++..
T Consensus 16 ~~~~~lv-~f~a~wC~~C~~~~~~l~~~~~~~---~~~v~~~~vd~~~-----------~-------~~l~~~~~v~~-- 71 (112)
T 2voc_A 16 SEGVVLA-DFWAPWCGPSKMIAPVLEELDQEM---GDKLKIVKIDVDE-----------N-------QETAGKYGVMS-- 71 (112)
T ss_dssp SSSEEEE-EEECTTBGGGGGHHHHHHHHHHHH---TTTCEEEEEETTT-----------C-------CSHHHHTTCCS--
T ss_pred CCCEEEE-EEECCCCHHHHHHHHHHHHHHHHh---CCCcEEEEEECCC-----------C-------HHHHHHcCCCc--
Confidence 3455555 566789999999999999998865 3467777777652 1 13567788887
Q ss_pred cceEEE--cCeEe--ccC-CChhhHHHHHHcCCCC
Q 023845 120 TPQLVF--QGRVQ--CQG-NDQDGMLSAIANAPKF 149 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g-~~~~~~~~~i~~~~~~ 149 (276)
+|++++ ||+.. ..| .+.+.+.+.|.+....
T Consensus 72 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 72 IPTLLVLKDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp BSEEEEEETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred ccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 999988 99864 334 3577788888876643
No 64
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.44 E-value=0.00021 Score=55.40 Aligned_cols=63 Identities=21% Similarity=0.234 Sum_probs=42.3
Q ss_pred EEEecC-----CCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 46 VELFSS-----QGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 46 VElFTS-----qGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
|.+|+. .+|+.|-.|.++|.++.-.+ -.++|+ .+ .+.+..+.+..|.++ +
T Consensus 17 vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~---------~~vdi~-----------~~---~~~~~~l~~~~g~~~--v 71 (109)
T 1wik_A 17 VMLFMKGNKQEAKCGFSKQILEILNSTGVEY---------ETFDIL-----------ED---EEVRQGLKTFSNWPT--Y 71 (109)
T ss_dssp EEEEESSTTTCCCSSTHHHHHHHHHHTCSCE---------EEEESS-----------SC---HHHHHHHHHHHSCCS--S
T ss_pred EEEEEecCCCCCCCchHHHHHHHHHHcCCCe---------EEEECC-----------CC---HHHHHHHHHHhCCCC--C
Confidence 457999 99999999999999874321 122332 11 233445566667666 9
Q ss_pred ceEEEcCeEeccCC
Q 023845 121 PQLVFQGRVQCQGN 134 (276)
Q Consensus 121 Pq~vVnG~~~~~g~ 134 (276)
|+++|||+. ++|.
T Consensus 72 P~ifi~g~~-igG~ 84 (109)
T 1wik_A 72 PQLYVRGDL-VGGL 84 (109)
T ss_dssp CEEECSSSE-EECH
T ss_pred CEEEECCEE-EcCH
Confidence 999999974 4443
No 65
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.43 E-value=0.00044 Score=50.97 Aligned_cols=83 Identities=16% Similarity=0.281 Sum_probs=58.8
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||. |++.+|++|-.....|.++++++ .+++..+.+++| ......+.+++..
T Consensus 18 ~~~~~lv~-f~~~~C~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~------------------~~~~~~~~~~v~~-- 73 (106)
T 3die_A 18 ESGVQLVD-FWATACGPCKMIAPVLEELAADY---EGKADILKLDVD------------------ENPSTAAKYEVMS-- 73 (106)
T ss_dssp CSSEEEEE-EECSBCHHHHHHHHHHHHHHHHT---TTTCEEEEEETT------------------TCHHHHHHTTCCS--
T ss_pred cCCcEEEE-EECCCCHHHHHHhHHHHHHHHHh---cCCcEEEEEECC------------------cCHHHHHhCCCcc--
Confidence 34555555 55889999999999999999876 345776666664 1245678889888
Q ss_pred cceEEE--cCeEec--cC-CChhhHHHHHHcC
Q 023845 120 TPQLVF--QGRVQC--QG-NDQDGMLSAIANA 146 (276)
Q Consensus 120 TPq~vV--nG~~~~--~g-~~~~~~~~~i~~~ 146 (276)
+|++++ ||+... .| .+.+.+.+.|.+.
T Consensus 74 ~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 74 IPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp BSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred cCEEEEEeCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 899877 887543 33 3567777777653
No 66
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.43 E-value=0.00037 Score=53.48 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=60.8
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||..| +.+|++|......|.++.+++ . ++..+.+++|- ....|+ .-+.+.+......+
T Consensus 23 ~~k~~lv~f~-~~~C~~C~~~~~~l~~~~~~~---~-~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~ 93 (136)
T 1lu4_A 23 QGKPAVLWFW-TPWCPFCNAEAPSLSQVAAAN---P-AVTFVGIATRADVGAMQSFVSKYNL----NFTNLNDADGVIWA 93 (136)
T ss_dssp TTSCEEEEEE-CTTCHHHHHHHHHHHHHHHHC---T-TSEEEEEECSSCHHHHHHHHHHHTC----CSEEEECTTSHHHH
T ss_pred CCCEEEEEEE-CCcChhHHHHHHHHHHHHHHC---C-CcEEEEEEcCCCHHHHHHHHHHcCC----CceEEECCchhHHH
Confidence 3467777666 889999999999999999875 2 67777777652 000111 01112222345567
Q ss_pred HhCCCCCCcceEEE---cCeEe-cc---C-CChhhHHHHHHcC
Q 023845 112 ALNLDTMFTPQLVF---QGRVQ-CQ---G-NDQDGMLSAIANA 146 (276)
Q Consensus 112 ~~g~~~vYTPq~vV---nG~~~-~~---g-~~~~~~~~~i~~~ 146 (276)
.+++.. +|++++ ||+.. .. | .+.+.+.+.|++.
T Consensus 94 ~~~i~~--~P~~~lid~~G~i~~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 94 RYNVPW--QPAFVFYRADGTSTFVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HTTCCS--SSEEEEECTTSCEEEECCSSSCCCHHHHHHHHHHC
T ss_pred hcCCCC--CCEEEEECCCCcEEEEEcCCCccCHHHHHHHHHHH
Confidence 788776 899765 67763 23 3 3567777777754
No 67
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=97.43 E-value=0.00032 Score=52.53 Aligned_cols=79 Identities=25% Similarity=0.438 Sum_probs=57.1
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
..+|=.|++.+|+.|-.....|.++.+++ +++..+.+++| ......+.+++.. +|+
T Consensus 27 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~----~~v~~~~v~~~------------------~~~~~~~~~~v~~--~Pt 82 (113)
T 1ti3_A 27 KLIVVDFTASWCPPCKMIAPIFAELAKKF----PNVTFLKVDVD------------------ELKAVAEEWNVEA--MPT 82 (113)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHC----SSEEEEEEETT------------------TCHHHHHHHHCSS--TTE
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHhC----CCcEEEEEEcc------------------ccHHHHHhCCCCc--ccE
Confidence 34555566789999999999999998864 36777666664 1234567788876 999
Q ss_pred EEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 123 LVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 123 ~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
+++ ||+.. ..|.+.+.+...|++
T Consensus 83 ~~~~~~G~~~~~~~g~~~~~l~~~l~~ 109 (113)
T 1ti3_A 83 FIFLKDGKLVDKTVGADKDGLPTLVAK 109 (113)
T ss_dssp EEEEETTEEEEEEECCCTTHHHHHHHH
T ss_pred EEEEeCCEEEEEEecCCHHHHHHHHHH
Confidence 988 88753 355667777777765
No 68
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.42 E-value=0.00029 Score=51.82 Aligned_cols=80 Identities=20% Similarity=0.320 Sum_probs=58.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++|. |.+.+|+.|-.....|.++.+++ +++..+.++++- .....+.+++.. +
T Consensus 19 ~~~~~v~-f~~~~C~~C~~~~~~l~~~~~~~----~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 73 (104)
T 2vim_A 19 GRLIVVD-FFAQWCGPCRNIAPKVEALAKEI----PEVEFAKVDVDQ------------------NEEAAAKYSVTA--M 73 (104)
T ss_dssp TSCEEEE-EECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCeEEEE-EECCCCHHHHHhhHHHHHHHHHC----CCCEEEEEeccC------------------CHHHHHHcCCcc--c
Confidence 4455555 55889999999999999998864 367777776651 235677889887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|.+.+.+...|++
T Consensus 74 Pt~~~~~~g~~~~~~~G~~~~~l~~~l~~ 102 (104)
T 2vim_A 74 PTFVFIKDGKEVDRFSGANETKLRETITR 102 (104)
T ss_dssp SEEEEEETTEEEEEEESSCHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEEEeCCCHHHHHHHHHh
Confidence 99888 88764 345567777777654
No 69
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.42 E-value=0.00064 Score=53.33 Aligned_cols=84 Identities=14% Similarity=0.251 Sum_probs=59.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++.+++ .++|..+.+.+|- .....+.+++.. +
T Consensus 51 ~k~vlv-~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 106 (141)
T 3hxs_A 51 DKPAIV-DFYADWCGPCKMVAPILEELSKEY---AGKIYIYKVNVDK------------------EPELARDFGIQS--I 106 (141)
T ss_dssp SSCEEE-EEECTTCTTHHHHHHHHHHHHHHT---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHHHHHHHHHHHh---cCceEEEEEECCC------------------CHHHHHHcCCCC--c
Confidence 455555 456789999999999999999876 3467776666641 235688899887 9
Q ss_pred ceEEE---cCeEe-ccC-CChhhHHHHHHcCCC
Q 023845 121 PQLVF---QGRVQ-CQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 121 Pq~vV---nG~~~-~~g-~~~~~~~~~i~~~~~ 148 (276)
|++++ +|+.. ..| .+.+.+...|.+.+.
T Consensus 107 Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 107 PTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp SEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred CEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 99876 45422 233 357788888887654
No 70
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.42 E-value=0.00081 Score=49.47 Aligned_cols=70 Identities=17% Similarity=0.223 Sum_probs=47.3
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh-CCCCCCcceE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL-NLDTMFTPQL 123 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~-g~~~vYTPq~ 123 (276)
-|.+|++.+|++|-.+..+|.++.-.+ . .++|+ .+.+..+.+.+ |..+ +|++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~i~~-------~--~vdv~----------------~~~~~~l~~~~~~~~~--vP~l 59 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKGVKY-------T--DIDAS----------------TSLRQEMVQRANGRNT--FPQI 59 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHTCCE-------E--EECSC----------------HHHHHHHHHHHHSSCC--SCEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcCCCc-------E--EEECC----------------HHHHHHHHHHhCCCCC--cCEE
Confidence 377899999999999999999875321 0 11221 23456677777 8777 9999
Q ss_pred EEcCeEeccCCChhhHHHHHH
Q 023845 124 VFQGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 124 vVnG~~~~~g~~~~~~~~~i~ 144 (276)
++||+. +.| .+.+..++.
T Consensus 60 ~~~g~~-i~g--~~~i~~~~~ 77 (89)
T 2klx_A 60 FIGDYH-VGG--CDDLYALEN 77 (89)
T ss_dssp EETTEE-CCS--HHHHHHHHH
T ss_pred EECCEE-EeC--hHHHHHHHH
Confidence 999975 333 344444443
No 71
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.40 E-value=0.00045 Score=52.44 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=58.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++++++ .+++..+.++++- .....+++++.. +
T Consensus 30 ~~~~lv-~f~~~~C~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~i~~--~ 85 (121)
T 2i1u_A 30 NKPVLV-DFWATWCGPCKMVAPVLEEIATER---ATDLTVAKLDVDT------------------NPETARNFQVVS--I 85 (121)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCcEEE-EEECCCCHHHHHHHHHHHHHHHHh---cCCeEEEEEECCC------------------CHHHHHhcCCCc--C
Confidence 445554 577789999999999999999875 3467777776651 134677889887 9
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~~~ 147 (276)
|++++ ||+... .|. +.+.+...|++.+
T Consensus 86 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 86 PTLILFKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred CEEEEEECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 99988 887642 343 3566777666543
No 72
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.38 E-value=0.00044 Score=51.54 Aligned_cols=81 Identities=22% Similarity=0.404 Sum_probs=58.4
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||. |++.+|++|-.....|.++++++ .+++..+.+++| ......+++++.. +
T Consensus 22 ~~~vlv~-f~a~~C~~C~~~~~~~~~~~~~~---~~~v~~~~vd~~------------------~~~~l~~~~~v~~--~ 77 (111)
T 3gnj_A 22 GKACLVM-FSRKNCHVCQKVTPVLEELRLNY---EESFGFYYVDVE------------------EEKTLFQRFSLKG--V 77 (111)
T ss_dssp CCCEEEE-EECSSCHHHHHHHHHHHHHHHHT---TTTSEEEEEETT------------------TCHHHHHHTTCCS--S
T ss_pred CCEEEEE-EeCCCChhHHHHHHHHHHHHHHc---CCceEEEEEECC------------------cChhHHHhcCCCc--C
Confidence 4555555 56789999999999999999875 335777777765 1235678899887 9
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|. +.+.+...|++
T Consensus 78 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~ 107 (111)
T 3gnj_A 78 PQILYFKDGEYKGKMAGDVEDDEVEQMIAD 107 (111)
T ss_dssp CEEEEEETTEEEEEEESSCCHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeccCCHHHHHHHHHH
Confidence 99887 88764 2343 56777777664
No 73
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.37 E-value=0.00091 Score=53.10 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=62.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCC-----CCCCCccccHH---HHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWK-----DPYGSSQWTVR---QKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWk-----D~fa~~~~t~R---q~~Y~~ 111 (276)
.++++||.. .+.+|+.|......|.++.+++. ..++..+++.+|. +.--|+ ..+.-+...+. ....++
T Consensus 28 ~gk~vll~F-~a~~C~~C~~~~~~l~~l~~~~~--~~~~~vv~v~~d~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 103 (152)
T 2lrn_A 28 KGKYVLVDF-WFAGCSWCRKETPYLLKTYNAFK--DKGFTIYGVSTDR-REEDWKKAIEEDKSYWNQVLLQKDDVKDVLE 103 (152)
T ss_dssp TTSEEEEEE-ECTTCTTHHHHHHHHHHHHHHHT--TTTEEEEEEECCS-CHHHHHHHHHHHTCCSEEEEECHHHHHHHHH
T ss_pred CCCEEEEEE-ECCCChhHHHHHHHHHHHHHHhc--cCCeEEEEEEccC-CHHHHHHHHHHhCCCCeEEecccchhHHHHH
Confidence 345666655 48899999999999999987663 3358888887762 000000 00001111111 456678
Q ss_pred HhCCCCCCcce-EEE--cCeEeccCCChhhHHHHHHcCCC
Q 023845 112 ALNLDTMFTPQ-LVF--QGRVQCQGNDQDGMLSAIANAPK 148 (276)
Q Consensus 112 ~~g~~~vYTPq-~vV--nG~~~~~g~~~~~~~~~i~~~~~ 148 (276)
.+|+.. +|. ++| ||+......+.+.+...|++...
T Consensus 104 ~~~v~~--~P~~~lid~~G~i~~~~~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 104 SYCIVG--FPHIILVDPEGKIVAKELRGDDLYNTVEKFVN 141 (152)
T ss_dssp HTTCCS--SCEEEEECTTSEEEEECCCTTHHHHHHHHHHT
T ss_pred HhCCCc--CCeEEEECCCCeEEEeeCCHHHHHHHHHHHHh
Confidence 888876 899 455 57766554455667777765443
No 74
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.36 E-value=0.00033 Score=51.73 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=43.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
-|.+|++.+|++|-.+..+|.++.-.+ . .++++ . ..+.+..+.+.++..+ +|+++
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~~i~~-------~--~~di~-----------~---~~~~~~~l~~~~~~~~--vP~l~ 61 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARKGAEF-------N--EIDAS-----------A---TPELRAEMQERSGRNT--FPQIF 61 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCC-------E--EEEST-----------T---SHHHHHHHHHHHTSSC--CCEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHcCCCc-------E--EEECC-----------C---CHHHHHHHHHHhCCCC--cCEEE
Confidence 378999999999999999999864321 1 12222 1 1233456677778777 89999
Q ss_pred EcCeEeccC
Q 023845 125 FQGRVQCQG 133 (276)
Q Consensus 125 VnG~~~~~g 133 (276)
+||+. ..|
T Consensus 62 ~~g~~-i~g 69 (92)
T 2khp_A 62 IGSVH-VGG 69 (92)
T ss_dssp ETTEE-EES
T ss_pred ECCEE-EcC
Confidence 99974 444
No 75
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.35 E-value=0.00046 Score=53.38 Aligned_cols=85 Identities=19% Similarity=0.266 Sum_probs=59.9
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
..++++|| .|++.+|+.|-.....|.++++.+. ..+|..+.+.+|- .....+.+++..
T Consensus 31 ~~~k~vvv-~f~a~~C~~C~~~~~~l~~l~~~~~--~~~v~~~~vd~d~------------------~~~~~~~~~v~~- 88 (121)
T 2j23_A 31 GGDKVVVI-DFWATWCGPCKMIGPVFEKISDTPA--GDKVGFYKVDVDE------------------QSQIAQEVGIRA- 88 (121)
T ss_dssp SSSSCEEE-EEECTTCSTHHHHHHHHHHHHTSTH--HHHSEEEEEETTT------------------CHHHHHHHTCCS-
T ss_pred cCCCEEEE-EEECCCCHhHHHHHHHHHHHHHHCc--CCcEEEEEEECcC------------------CHHHHHHcCCCc-
Confidence 33455665 5667899999999999999998652 1127777776651 134677888887
Q ss_pred CcceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 119 FTPQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 119 YTPq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
+|++++ ||+.. ..|.+.+.+...|.+.
T Consensus 89 -~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~ 119 (121)
T 2j23_A 89 -MPTFVFFKNGQKIDTVVGADPSKLQAAITQH 119 (121)
T ss_dssp -SSEEEEEETTEEEEEEESSCHHHHHHHHHHH
T ss_pred -ccEEEEEECCeEEeeEcCCCHHHHHHHHHHh
Confidence 999888 88763 3555777787777653
No 76
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.35 E-value=0.00038 Score=52.44 Aligned_cols=81 Identities=21% Similarity=0.307 Sum_probs=57.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ +++..+.++++ + .....++++++.+ +
T Consensus 24 ~~~vlv-~f~a~wC~~C~~~~~~l~~~~~~~----~~v~~~~vd~~--~---------------~~~~~~~~~~v~~--~ 79 (111)
T 2pu9_C 24 DKPVVL-DMFTQWCGPSKAMAPKYEKLAEEY----LDVIFLKLDCN--Q---------------ENKTLAKELGIRV--V 79 (111)
T ss_dssp TSCEEE-EEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEECS--S---------------TTHHHHHHHCCSB--S
T ss_pred CCEEEE-EEECCcCHhHHHHCHHHHHHHHHC----CCeEEEEEecC--c---------------chHHHHHHcCCCe--e
Confidence 455666 566689999999999999998865 35776666664 0 1245677889887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|.+.+.+...|++
T Consensus 80 Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 108 (111)
T 2pu9_C 80 PTFKILKENSVVGEVTGAKYDKLLEAIQA 108 (111)
T ss_dssp SEEEEESSSSEEEEEESSCHHHHHHHHHH
T ss_pred eEEEEEeCCcEEEEEcCCCHHHHHHHHHH
Confidence 99888 77653 456667777777654
No 77
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.34 E-value=0.00029 Score=54.42 Aligned_cols=67 Identities=24% Similarity=0.266 Sum_probs=45.5
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|+..+|++|-.|..+|.++.-.+ . .+.++- | .+...+.+..+.+..|.++ +|+++|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~i~~-----~----~~di~~-------~---~~~~~~~~~~l~~~~g~~t--vP~ifi 79 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLGVQP-----L----VVELDQ-------L---GPQGPQLQKVLERLTGQHT--VPNVFV 79 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC-----E----EEEGGG-------S---TTHHHHHHHHHHHHHSCCS--SCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCC-----e----EEEeec-------C---CCChHHHHHHHHHHhCCCC--cCEEEE
Confidence 67799999999999999999986532 1 133330 0 1122344555666678777 999999
Q ss_pred cCeEeccCC
Q 023845 126 QGRVQCQGN 134 (276)
Q Consensus 126 nG~~~~~g~ 134 (276)
||+. ++|.
T Consensus 80 ~g~~-igG~ 87 (113)
T 3rhb_A 80 CGKH-IGGC 87 (113)
T ss_dssp TTEE-EESH
T ss_pred CCEE-EcCc
Confidence 9974 4443
No 78
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.34 E-value=0.00044 Score=55.62 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=61.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc---CCCCCCCCC-CccccHHHHHHH-----
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD---YMGWKDPYG-SSQWTVRQKAYV----- 110 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD---ylGWkD~fa-~~~~t~Rq~~Y~----- 110 (276)
..+++||+.| +.+|++|......|.+|.+++ . +|..+++++|+-. ..|-.|+-. .+...+..+.|.
T Consensus 36 ~gk~~lv~F~-~~~C~~C~~~~~~l~~l~~~~---~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (165)
T 3ha9_A 36 GGDVVILWFM-AAWCPSCVYMADLLDRLTEKY---R-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGD 110 (165)
T ss_dssp CSSEEEEEEE-CTTCTTHHHHHHHHHHHHHHC---T-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSC
T ss_pred CCCEEEEEEE-CCCCcchhhhHHHHHHHHHHc---C-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCC
Confidence 3466777665 899999999999999999876 2 8888888887210 001111111 112233334444
Q ss_pred -------------HHhCCCCCCcceEEE---cCeEeccCC--ChhhHHHHHHcCC
Q 023845 111 -------------EALNLDTMFTPQLVF---QGRVQCQGN--DQDGMLSAIANAP 147 (276)
Q Consensus 111 -------------~~~g~~~vYTPq~vV---nG~~~~~g~--~~~~~~~~i~~~~ 147 (276)
+.+++.. +|.++| ||+....|. +.+.+...|++.+
T Consensus 111 ~~~~~~~d~~~~~~~~~v~~--~P~~~lid~~G~i~~~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 111 PSWIMVMDDGSLVEKFNVRS--IDYIVIMDKSSNVLYAGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp TTSEEEECCSHHHHHTTCCS--SSEEEEEETTCCEEEEEESCCHHHHHHHHHHC-
T ss_pred CCeeEEeChHHHHHHhCCCC--ceEEEEEcCCCcEEEeCCCCCHHHHHHHHHHHh
Confidence 4445554 898766 676655443 3667777776643
No 79
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.33 E-value=0.00021 Score=56.87 Aligned_cols=100 Identities=21% Similarity=0.265 Sum_probs=61.5
Q ss_pred cCCceEEEEecCCCCCCCHH-HHHHHHHhcccCCCCCCCEEEEEEeeec--------------ccCCCCCCCCCCccccH
Q 023845 40 RGGAVLVELFSSQGCKTSPE-AEILVSRLGRGDFELGVPVIVLAYHVDY--------------WDYMGWKDPYGSSQWTV 104 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~-Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------------WDylGWkD~fa~~~~t~ 104 (276)
.++++||+.|.+ +|+.|-. .-..|.++.+++. ..+|..+++++|+ ....|+. | |...+
T Consensus 29 ~gk~vlv~F~a~-~C~~C~~e~~~~l~~l~~~~~--~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~d 101 (160)
T 3lor_A 29 RGKVVVVEVFQM-LCPGCVNHGVPQAQKIHRMID--ESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIK--F--PVAVD 101 (160)
T ss_dssp TTSEEEEEEECT-TCHHHHHTHHHHHHHHHHHSC--TTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC--S--CEEEE
T ss_pred CCCEEEEEEEcC-CCcchhhhhhHHHHHHHHHhC--cCCcEEEEEeccccccccCCHHHHHHHHHHcCCC--C--cEEEC
Confidence 356888877776 9999999 6999999998774 3469999998862 1111111 0 01111
Q ss_pred HHH------HHHHHhCCCCCCcce-EEEc--CeEecc--C-CChhhHHHHHHcCCC
Q 023845 105 RQK------AYVEALNLDTMFTPQ-LVFQ--GRVQCQ--G-NDQDGMLSAIANAPK 148 (276)
Q Consensus 105 Rq~------~Y~~~~g~~~vYTPq-~vVn--G~~~~~--g-~~~~~~~~~i~~~~~ 148 (276)
... ..++.+|+.. +|. ++|| |+.... | .+.+.+...|++.++
T Consensus 102 ~~~~~~~~~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 102 MPREGQRIPSTMKKYRLEG--TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CCCTTCSSCHHHHHTTCCS--SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred CccccchhhhHHHhcccCc--cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 111 1566677766 886 5554 554432 3 356677777776554
No 80
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.00013 Score=59.14 Aligned_cols=69 Identities=19% Similarity=0.137 Sum_probs=44.7
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+||..+||.|-.|.++|.+...- .... -.+.+| ..+.-.++|....+..|.++ +||++|
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~~~----~v~~--~~idid-----------~~~d~~~~~~~l~~~~G~~t--VP~IfI 76 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEYQF----IPNY--YIIELD-----------KHGHGEELQEYIKLVTGRGT--VPNLLV 76 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHEEE----ESCC--EEEEGG-----------GSTTHHHHHHHHHHHHSCCS--SCEEEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhccc----CCCc--EEEEec-----------CCCCHHHHHHHHHHHcCCCC--cceEEE
Confidence 7899999999999999999985310 0010 112333 11222345565556668777 999999
Q ss_pred cCeEeccCC
Q 023845 126 QGRVQCQGN 134 (276)
Q Consensus 126 nG~~~~~g~ 134 (276)
||+ .++|.
T Consensus 77 ~G~-~IGG~ 84 (127)
T 3l4n_A 77 NGV-SRGGN 84 (127)
T ss_dssp TTE-ECCCH
T ss_pred CCE-EEcCH
Confidence 997 44443
No 81
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.32 E-value=0.00053 Score=54.92 Aligned_cols=63 Identities=19% Similarity=0.214 Sum_probs=43.6
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|+..+|++|..+..+|.++.-.+ . .+.||- .+...+.+....+.+|.++ +|++++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~i~~-----~----~vdid~-----------~~~~~~~~~~l~~~~g~~~--vP~l~i 86 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMNVNY-----K----VVELDL-----------LEYGNQFQDALYKMTGERT--VPRIFV 86 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHTCCC-----E----EEETTT-----------STTHHHHHHHHHHHHSSCC--SSEEEE
T ss_pred EEEEEcCCChHHHHHHHHHHHcCCCc-----E----EEECcC-----------CcCcHHHHHHHHHHhCCCC--cCEEEE
Confidence 34599999999999999999986432 1 133331 1112334556777888887 999999
Q ss_pred cCeEe
Q 023845 126 QGRVQ 130 (276)
Q Consensus 126 nG~~~ 130 (276)
||+..
T Consensus 87 ~G~~i 91 (130)
T 2cq9_A 87 NGTFI 91 (130)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 99754
No 82
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.32 E-value=0.00087 Score=50.13 Aligned_cols=82 Identities=11% Similarity=0.054 Sum_probs=53.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ +++..+.+.+|- . ...++++++.+ +
T Consensus 18 ~~~vlv-~f~a~wC~~C~~~~p~~~~~~~~~----~~~~~~~vd~~~-----------~-------~~l~~~~~v~~--~ 72 (105)
T 4euy_A 18 QQLVLL-FIKTENCGVCDVMLRKVNYVLENY----NYVEKIEILLQD-----------M-------QEIAGRYAVFT--G 72 (105)
T ss_dssp SSEEEE-EEEESSCHHHHHHHHHHHHHHHTC----TTEEEEEEEECC-----------C----------------CC--C
T ss_pred CCCEEE-EEeCCCCcchHHHHHHHHHHHHHc----CCceEEEEECCC-----------C-------HHHHHhcCCCC--C
Confidence 445555 566789999999999999999864 477777777762 1 13466778887 8
Q ss_pred ceEEE--cCeEec---cCCChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQC---QGNDQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~~---~g~~~~~~~~~i~~~~ 147 (276)
|++++ ||+... +..+.+.+...|++..
T Consensus 73 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 73 PTVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp CEEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CEEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 98776 887653 3336777888777643
No 83
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=97.32 E-value=0.00018 Score=53.28 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=43.8
Q ss_pred EEEecCC----CCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCC---C
Q 023845 46 VELFSSQ----GCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDT---M 118 (276)
Q Consensus 46 VElFTSq----GCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~---v 118 (276)
|.+|+.. +|++|-.|.++|.++.-.+ . .+.++- .-| ....+.+....+..|.+. .
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~gi~y-----~----~idI~~--~~~-------~~~~~~~~~l~~~~g~~~~~~~ 63 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVKKQPF-----E----FINIMP--EKG-------VFDDEKIAELLTKLGRDTQIGL 63 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHTTCCE-----E----EEESCS--BTT-------BCCHHHHHHHHHHHTCSCCTTC
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHcCCCE-----E----EEEeec--ccc-------ccCHHHHHHHHHHhCCCCCCCC
Confidence 6799999 9999999999999865422 1 122321 000 012344455666677661 1
Q ss_pred CcceEEE-cCeEeccC
Q 023845 119 FTPQLVF-QGRVQCQG 133 (276)
Q Consensus 119 YTPq~vV-nG~~~~~g 133 (276)
.+|+++| ||+. ++|
T Consensus 64 tvP~v~i~~g~~-igG 78 (87)
T 1aba_A 64 TMPQVFAPDGSH-IGG 78 (87)
T ss_dssp CSCEEECTTSCE-EES
T ss_pred ccCEEEEECCEE-EeC
Confidence 4999999 9964 444
No 84
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.29 E-value=0.00067 Score=49.39 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=57.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++ |-.|++.+|++|-.....|.++++++ +++..+.+++|- .....+.+++.. +
T Consensus 16 ~~~~-~v~f~~~~C~~C~~~~~~~~~~~~~~----~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 70 (104)
T 2e0q_A 16 HEIA-VVDFWAEWCAPCLILAPIIEELAEDY----PQVGFGKLNSDE------------------NPDIAARYGVMS--L 70 (104)
T ss_dssp SSEE-EEEEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCcE-EEEEECCCChhHHHHhHHHHHHHHHc----CCceEEEEECCC------------------CHHHHHhCCccc--c
Confidence 3444 45566889999999999999998865 246666666541 235677889887 9
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~~ 146 (276)
|++++ ||+... .|. +.+.+...|++.
T Consensus 71 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEPVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeEhhhccCCCCHHHHHHHHHHH
Confidence 99998 898643 343 466777776653
No 85
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.29 E-value=0.00063 Score=52.96 Aligned_cols=82 Identities=10% Similarity=0.289 Sum_probs=58.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||+ |++.+|++|-.....|.++++++ .++|..+.+++|- ....++++++..
T Consensus 41 ~~k~vlv~-F~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~~vd~d~------------------~~~l~~~~~v~~-- 96 (128)
T 3ul3_B 41 KNTVIVLY-FFAKWCQACTMQSTEMDKLQKYY---GKRIYLLKVDLDK------------------NESLARKFSVKS-- 96 (128)
T ss_dssp CCSEEEEE-EECTTCHHHHHHHHHHHHHHHHH---GGGEEEEEEEGGG------------------CHHHHHHTTCCS--
T ss_pred cCCEEEEE-EECCCCHHHHHHhHHHHHHHHHh---cCCeEEEEEECCC------------------CHHHHHHcCCCC--
Confidence 34555555 55779999999999999999875 3578888777652 236688899988
Q ss_pred cceEEE--cCeEec--cC-CChhhHHHHHHc
Q 023845 120 TPQLVF--QGRVQC--QG-NDQDGMLSAIAN 145 (276)
Q Consensus 120 TPq~vV--nG~~~~--~g-~~~~~~~~~i~~ 145 (276)
+|++++ ||+... .| .+.+.+...|++
T Consensus 97 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 97 LPTIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp SSEEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred cCEEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 999888 887654 22 456667666643
No 86
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.29 E-value=0.00029 Score=54.75 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=61.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-------------ccCCCCCCCCCCccccHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-------------WDYMGWKDPYGSSQWTVRQ 106 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-------------WDylGWkD~fa~~~~t~Rq 106 (276)
.++++||.. .+.+|++|......|.++.+++. +++..+.+++|. ....|+. | |...+..
T Consensus 28 ~gk~~lv~f-~~~~C~~C~~~~~~l~~l~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~d~~ 99 (148)
T 2b5x_A 28 GEKPTLIHF-WSISCHLCKEAMPQVNEFRDKYQ---DQLNVVAVHMPRSEDDLDPGKIKETAAEHDIT--Q--PIFVDSD 99 (148)
T ss_dssp TTSCEEEEE-ECTTCHHHHHHHHHHHHHHHHHT---TTSEEEEEECCCSTTTSSHHHHHHHHHHTTCC--S--CEEECSS
T ss_pred CCCEEEEEE-EcCCCHHHHHHhHHHHHHHHHhc---CCcEEEEEEcCCCccccCHHHHHHHHHHcCCC--c--ceEECCc
Confidence 446677755 57999999999999999988763 337888888763 1111111 0 1112222
Q ss_pred HHHHHHhCCCCCCcceEEE---cCeEec--cC-CChhhHHHHHHcCC
Q 023845 107 KAYVEALNLDTMFTPQLVF---QGRVQC--QG-NDQDGMLSAIANAP 147 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vV---nG~~~~--~g-~~~~~~~~~i~~~~ 147 (276)
....+.+++.. +|+++| ||+... .| .+.+.+...|++.+
T Consensus 100 ~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 100 HALTDAFENEY--VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp CHHHHHTCCCC--SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHH
T ss_pred hhHHHHhCCCC--CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 34567788776 999766 676543 23 34666777776644
No 87
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.29 E-value=0.00074 Score=52.07 Aligned_cols=80 Identities=18% Similarity=0.322 Sum_probs=59.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||+ |++.+|++|-.....+.++++.+ +++..+.+.+| .....++++++++ +
T Consensus 20 ~k~vvv~-F~a~wC~~C~~~~p~~~~~~~~~----~~~~~~~vd~d------------------~~~~l~~~~~V~~--~ 74 (105)
T 3zzx_A 20 NKLVVID-FYATWCGPCKMIAPKLEELSQSM----SDVVFLKVDVD------------------ECEDIAQDNQIAC--M 74 (105)
T ss_dssp TSEEEEE-EECTTCHHHHHHHHHHHHHHHHC----TTEEEEEEETT------------------TCHHHHHHTTCCB--S
T ss_pred CCEEEEE-EECCCCCCccCCCcchhhhhhcc----CCeEEEEEecc------------------cCHHHHHHcCCCe--e
Confidence 3455555 66789999999999999999874 47776666554 2245788999998 7
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|.+.+++...|.+
T Consensus 75 PT~~~~~~G~~v~~~~G~~~~~l~~~i~k 103 (105)
T 3zzx_A 75 PTFLFMKNGQKLDSLSGANYDKLLELVEK 103 (105)
T ss_dssp SEEEEEETTEEEEEEESCCHHHHHHHHHH
T ss_pred cEEEEEECCEEEEEEeCcCHHHHHHHHHh
Confidence 77555 78753 477888888877764
No 88
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=97.28 E-value=0.00048 Score=56.01 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=41.9
Q ss_pred EEEEecCCCCCCC------HHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh-----
Q 023845 45 LVELFSSQGCKTS------PEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL----- 113 (276)
Q Consensus 45 vVElFTSqGCssC------P~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~----- 113 (276)
||++||+..|++| -.|.++|....=.+ --+.|+ .++ ..| ....++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~f---------eEidI~-----------~d~--~~r-~eM~~~~~~~~~ 57 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEANKIGF---------EEKDIA-----------ANE--ENR-KWMRENVPENSR 57 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHHTTCCE---------EEEECT-----------TCH--HHH-HHHHHHSCGGGS
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHHCCCce---------EEEECC-----------CCH--HHH-HHHHHhcccccc
Confidence 6899999999999 79999999754322 113332 111 233 2334444
Q ss_pred ---CCCCCCcceEEEcCeEeccCC
Q 023845 114 ---NLDTMFTPQLVFQGRVQCQGN 134 (276)
Q Consensus 114 ---g~~~vYTPq~vVnG~~~~~g~ 134 (276)
|.++ +||++|||+ +++|-
T Consensus 58 ~~~G~~t--vPQIFi~~~-~iGG~ 78 (121)
T 1u6t_A 58 PATGYPL--PPQIFNESQ-YRGDY 78 (121)
T ss_dssp CSSSSCC--SCEEEETTE-EEEEH
T ss_pred ccCCCcC--CCEEEECCE-EEech
Confidence 6666 899999996 45553
No 89
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.28 E-value=0.00025 Score=55.74 Aligned_cols=83 Identities=20% Similarity=0.346 Sum_probs=60.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||. |++.+|++|-.....|.++.+++ ++|..+.+++| ......+.+++..
T Consensus 45 ~~k~vvv~-f~a~wC~~C~~~~~~l~~l~~~~----~~v~~~~v~~~------------------~~~~~~~~~~v~~-- 99 (139)
T 3d22_A 45 DGKIVLAN-FSARWCGPSRQIAPYYIELSENY----PSLMFLVIDVD------------------ELSDFSASWEIKA-- 99 (139)
T ss_dssp HTCCEEEE-EECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETT------------------TSHHHHHHTTCCE--
T ss_pred cCCEEEEE-EECCCCHHHHHHHHHHHHHHHHC----CCCEEEEEeCc------------------ccHHHHHHcCCCc--
Confidence 35566665 66789999999999999998864 36777776665 1245778899887
Q ss_pred cceEEE--cCeEe--ccCCChhhHHHHHHcCC
Q 023845 120 TPQLVF--QGRVQ--CQGNDQDGMLSAIANAP 147 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~~~~~~~~~i~~~~ 147 (276)
+|++++ ||+.. ..|.+.+.+...|.+..
T Consensus 100 ~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~~ 131 (139)
T 3d22_A 100 TPTFFFLRDGQQVDKLVGANKPELHKKITAIL 131 (139)
T ss_dssp ESEEEEEETTEEEEEEESCCHHHHHHHHHHHH
T ss_pred ccEEEEEcCCeEEEEEeCCCHHHHHHHHHHHh
Confidence 999776 67654 34657777887777654
No 90
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.28 E-value=0.0012 Score=48.97 Aligned_cols=84 Identities=14% Similarity=0.236 Sum_probs=58.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| +|++.+|++|-.....|.++++.+....+++..+.+.++ ......+++++.. +
T Consensus 21 ~~~~lv-~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~------------------~~~~l~~~~~v~~--~ 79 (111)
T 3uvt_A 21 EGITFI-KFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT------------------AERNICSKYSVRG--Y 79 (111)
T ss_dssp SSEEEE-EEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT------------------TCHHHHHHTTCCS--S
T ss_pred CCcEEE-EEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc------------------ccHhHHHhcCCCc--c
Confidence 455655 677899999999999999999865322246776666654 1234678899887 8
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~ 145 (276)
|++++ ||+... .|. +.+.+.+.|++
T Consensus 80 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 80 PTLLLFRGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHH
T ss_pred cEEEEEeCCcEEEeccCCcCHHHHHHHHHh
Confidence 98877 887532 333 56677766654
No 91
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.28 E-value=0.00055 Score=52.71 Aligned_cols=81 Identities=14% Similarity=0.254 Sum_probs=56.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|+.|-.....|.++++++ ++|..+.+.+| .....++++++..
T Consensus 29 ~~k~vvv-~F~a~wC~~C~~~~p~l~~~~~~~----~~v~~~~vd~~------------------~~~~l~~~~~v~~-- 83 (114)
T 2oe3_A 29 QNDKLVI-DFYATWCGPCKMMQPHLTKLIQAY----PDVRFVKCDVD------------------ESPDIAKECEVTA-- 83 (114)
T ss_dssp HCSEEEE-EEECTTCHHHHHTHHHHHHHHHHC----TTSEEEEEETT------------------TCHHHHHHTTCCS--
T ss_pred CCCEEEE-EEECCCCHHHHHHHHHHHHHHHHC----CCCEEEEEECC------------------CCHHHHHHCCCCc--
Confidence 3445555 567899999999999999998875 24666665554 1135678888887
Q ss_pred cceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 120 TPQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
+|++++ ||+.. ..|...+.+.+.|++
T Consensus 84 ~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 113 (114)
T 2oe3_A 84 MPTFVLGKDGQLIGKIIGANPTALEKGIKD 113 (114)
T ss_dssp BSEEEEEETTEEEEEEESSCHHHHHHHHHT
T ss_pred ccEEEEEeCCeEEEEEeCCCHHHHHHHHHh
Confidence 899888 88764 455556667666653
No 92
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.27 E-value=0.00049 Score=54.22 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=60.8
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec---------ccCCCCCCCCCCccccHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY---------WDYMGWKDPYGSSQWTVRQKAYV 110 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY---------WDylGWkD~fa~~~~t~Rq~~Y~ 110 (276)
.++++||..| +.+|+.|......|.++.+++. ..++..+++.++. .+..|+. -+...+......
T Consensus 27 ~gk~~lv~f~-~~~C~~C~~~~~~l~~l~~~~~--~~~~~vv~v~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~ 99 (153)
T 2l5o_A 27 QGKVTLINFW-FPSCPGCVSEMPKIIKTANDYK--NKNFQVLAVAQPIDPIESVRQYVKDYGLP----FTVMYDADKAVG 99 (153)
T ss_dssp TTCEEEEEEE-CTTCTTHHHHHHHHHHHHHHGG--GTTEEEEEEECTTSCHHHHHHHHHHTTCC----SEEEECSSCHHH
T ss_pred CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhc--cCCeEEEEEecCCCCHHHHHHHHHHcCCC----ceEEcCchHHHH
Confidence 4567777655 7899999999999999987663 2357777776541 1111111 011122223456
Q ss_pred HHhCCCCCCcceEEE---cCeEe--ccC-CChhhHHHHHHcCCC
Q 023845 111 EALNLDTMFTPQLVF---QGRVQ--CQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 111 ~~~g~~~vYTPq~vV---nG~~~--~~g-~~~~~~~~~i~~~~~ 148 (276)
+.+++.. +|+++| ||+.. ..| .+.+.+.+.|++.+.
T Consensus 100 ~~~~i~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 100 QAFGTQV--YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp HHHTCCS--SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHcCCCc--cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 7788776 999765 67653 233 356777777776543
No 93
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.25 E-value=0.00038 Score=60.02 Aligned_cols=98 Identities=14% Similarity=0.203 Sum_probs=63.2
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccC----------------CCCCCCCC-------
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDY----------------MGWKDPYG------- 98 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDy----------------lGWkD~fa------- 98 (276)
..++|-.|++-.|++|-.....|.++.+. .-.|+-+.|++.-.+. .-|.|-|.
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 46788899999999999999999998652 1133333333311000 00100000
Q ss_pred -CccccHHHHHHHHHhCCCCCCcceEEE-cCeEeccCC-ChhhHHHHHHcC
Q 023845 99 -SSQWTVRQKAYVEALNLDTMFTPQLVF-QGRVQCQGN-DQDGMLSAIANA 146 (276)
Q Consensus 99 -~~~~t~Rq~~Y~~~~g~~~vYTPq~vV-nG~~~~~g~-~~~~~~~~i~~~ 146 (276)
-....+++...++.+|+++ ||+++| ||+. +.|. +.+.+.+.|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~g--TPt~vi~nG~~-~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRG--TPSIVTSTGEL-IGGYLKPADLLRALEET 209 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCS--SCEEECTTSCC-CCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCc--CCEEEEeCCEE-ecCCCCHHHHHHHHHhc
Confidence 1223457778889999998 999999 9984 4454 788888888764
No 94
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.25 E-value=0.0015 Score=48.90 Aligned_cols=88 Identities=10% Similarity=0.132 Sum_probs=58.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| +|++.+|++|-.....|.++.++......+|..+.+.++- . ..+.+++++..
T Consensus 23 ~~~~~lv-~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------~-------~~~~~~~~v~~-- 81 (120)
T 1mek_A 23 AHKYLLV-EFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-----------E-------SDLAQQYGVRG-- 81 (120)
T ss_dssp HCSEEEE-EEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-----------C-------CSSHHHHTCCS--
T ss_pred cCCeEEE-EEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-----------C-------HHHHHHCCCCc--
Confidence 3455555 5778899999999999999887653222456666555431 1 13456678877
Q ss_pred cceEEE--cCeE----eccCC-ChhhHHHHHHcCCC
Q 023845 120 TPQLVF--QGRV----QCQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 120 TPq~vV--nG~~----~~~g~-~~~~~~~~i~~~~~ 148 (276)
+|++++ ||+. ...|. +.+.+...|++...
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 82 YPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp SSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred ccEEEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 999888 8863 33343 57788888887654
No 95
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.25 E-value=0.00039 Score=55.11 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=57.8
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
++|=.|++.+|+.|-.....|.++.+++ +|..+.+.+|- ....++++++.. +|++
T Consensus 42 ~vvv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~------------------~~~l~~~~~v~~--~Pt~ 96 (133)
T 3cxg_A 42 SIVIKFGAVWCKPCNKIKEYFKNQLNYY-----YVTLVDIDVDI------------------HPKLNDQHNIKA--LPTF 96 (133)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHGGGGTE-----ECEEEEEETTT------------------CHHHHHHTTCCS--SSEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHhc-----CEEEEEEeccc------------------hHHHHHhcCCCC--CCEE
Confidence 4455678899999999999999998753 46666655541 245677899887 9997
Q ss_pred EE----cCe--E--eccCCChhhHHHHHHcCC
Q 023845 124 VF----QGR--V--QCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 124 vV----nG~--~--~~~g~~~~~~~~~i~~~~ 147 (276)
++ ||+ . ...|.+.+.+...|.+..
T Consensus 97 ~~~~~~~g~g~~~~~~~G~~~~~l~~~l~~~l 128 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGANQNDIEKAFQKYC 128 (133)
T ss_dssp EEEEEETTEEEEEEEEESCCHHHHHHHHHHHS
T ss_pred EEEEecCCCeEEEEEEcCCCHHHHHHHHHHHH
Confidence 66 897 2 345667888888887654
No 96
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.24 E-value=0.00066 Score=54.84 Aligned_cols=84 Identities=10% Similarity=0.155 Sum_probs=63.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.+|.+++ ++|..+.+.++- .....+.+++.. +
T Consensus 32 ~~~vvv-~F~a~wC~~C~~~~p~l~~l~~~~----~~v~~~~vd~~~------------------~~~l~~~~~v~~--~ 86 (153)
T 2wz9_A 32 KSLLVV-HFWAPWAPQCAQMNEVMAELAKEL----PQVSFVKLEAEG------------------VPEVSEKYEISS--V 86 (153)
T ss_dssp TSCEEE-EEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------SHHHHHHTTCCS--S
T ss_pred CCeEEE-EEECCCCHhHHHHHHHHHHHHHHc----CCeEEEEEECCC------------------CHHHHHHcCCCC--C
Confidence 455555 566889999999999999998864 467777776651 235677889887 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHcCCCC
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIANAPKF 149 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~~~~~ 149 (276)
|++++ ||+.. ..|.+.+.+...|++....
T Consensus 87 Pt~~~~~~G~~~~~~~G~~~~~l~~~i~~~l~~ 119 (153)
T 2wz9_A 87 PTFLFFKNSQKIDRLDGAHAPELTKKVQRHASS 119 (153)
T ss_dssp SEEEEEETTEEEEEEESSCHHHHHHHHHHHSCT
T ss_pred CEEEEEECCEEEEEEeCCCHHHHHHHHHHHhcc
Confidence 99888 99764 3566778888888877654
No 97
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.23 E-value=0.00067 Score=51.47 Aligned_cols=80 Identities=16% Similarity=0.235 Sum_probs=57.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ +++..+.+.+| .....++.+++.. +
T Consensus 24 ~k~vlv-~f~a~wC~~C~~~~p~l~~l~~~~----~~~~~~~vd~~------------------~~~~l~~~~~v~~--~ 78 (109)
T 3f3q_A 24 DKLVVV-DFYATWCGPCKMIAPMIEKFSEQY----PQADFYKLDVD------------------ELGDVAQKNEVSA--M 78 (109)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETT------------------TCHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCcCHhHHHHHHHHHHHHHHC----CCCEEEEEECC------------------CCHHHHHHcCCCc--c
Confidence 455555 566789999999999999999875 35666555554 1245678899988 8
Q ss_pred ceEEE--cCeEec--cCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQC--QGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~~~~~~~~~i~~ 145 (276)
|++++ ||+... .|.+.+.+...|++
T Consensus 79 Pt~~~~~~G~~~~~~~G~~~~~l~~~i~~ 107 (109)
T 3f3q_A 79 PTLLLFKNGKEVAKVVGANPAAIKQAIAA 107 (109)
T ss_dssp SEEEEEETTEEEEEEESSCHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeCCCHHHHHHHHHh
Confidence 99877 887643 46677777777764
No 98
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.21 E-value=0.0004 Score=53.26 Aligned_cols=69 Identities=20% Similarity=0.212 Sum_probs=44.8
Q ss_pred EEEecC-----CCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 46 VELFSS-----QGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 46 VElFTS-----qGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
|.+|+. .+|+.|..|.++|.++.-.+ ..+.|+ .+ .+.+..+.+..|.++ +
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~---------~~vdi~-----------~~---~~~~~~l~~~~g~~~--v 73 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNSTGVEY---------ETFDIL-----------ED---EEVRQGLKAYSNWPT--Y 73 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHTCCC---------EEEEGG-----------GC---HHHHHHHHHHHTCCS--S
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHCCCCe---------EEEECC-----------CC---HHHHHHHHHHHCCCC--C
Confidence 446998 99999999999999875421 123333 11 233344566678776 9
Q ss_pred ceEEEcCeEeccCCChhhHHHH
Q 023845 121 PQLVFQGRVQCQGNDQDGMLSA 142 (276)
Q Consensus 121 Pq~vVnG~~~~~g~~~~~~~~~ 142 (276)
|+++|||+. +.|. +.+..+
T Consensus 74 P~v~i~g~~-igg~--d~~~~l 92 (105)
T 2yan_A 74 PQLYVKGEL-VGGL--DIVKEL 92 (105)
T ss_dssp CEEEETTEE-EECH--HHHHHH
T ss_pred CeEEECCEE-EeCh--HHHHHH
Confidence 999999975 4442 444443
No 99
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.19 E-value=0.00059 Score=52.00 Aligned_cols=66 Identities=21% Similarity=0.252 Sum_probs=45.4
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcc
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTP 121 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTP 121 (276)
.++++ |++.+|++|-.+..+|.++..++ . -+.||. ++...+-+....+.+|+.+ +|
T Consensus 20 ~~vv~--f~a~~C~~C~~~~~~l~~~~~~~-----~----~v~v~~-----------~~~~~~~~~~l~~~~~v~~--~P 75 (116)
T 2e7p_A 20 APVVV--FSKTYCGYCNRVKQLLTQVGASY-----K----VVELDE-----------LSDGSQLQSALAHWTGRGT--VP 75 (116)
T ss_dssp SSEEE--EECTTCHHHHHHHHHHHHHTCCC-----E----EEEGGG-----------STTHHHHHHHHHHHHSCCS--SC
T ss_pred CCEEE--EECCCChhHHHHHHHHHHcCCCe-----E----EEEccC-----------CCChHHHHHHHHHHhCCCC--cC
Confidence 34444 99999999999999999997632 1 134442 1111223456778889877 99
Q ss_pred eEEEcCeEec
Q 023845 122 QLVFQGRVQC 131 (276)
Q Consensus 122 q~vVnG~~~~ 131 (276)
++++||+...
T Consensus 76 t~~~~g~~v~ 85 (116)
T 2e7p_A 76 NVFIGGKQIG 85 (116)
T ss_dssp EEEETTEEEE
T ss_pred EEEECCEEEC
Confidence 9999997653
No 100
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.17 E-value=0.00047 Score=56.35 Aligned_cols=84 Identities=12% Similarity=0.152 Sum_probs=61.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||. |.+.+|+.|-.....|.++++++ .++|..+.+++|- .....+++++++
T Consensus 63 ~~~~vlv~-F~a~wC~~C~~~~p~l~~la~~~---~~~v~~~~vd~~~------------------~~~l~~~~~i~~-- 118 (155)
T 2ppt_A 63 DDLPLLVD-FWAPWCGPCRQMAPQFQAAAATL---AGQVRLAKIDTQA------------------HPAVAGRHRIQG-- 118 (155)
T ss_dssp CSSCEEEE-EECTTCHHHHHHHHHHHHHHHHH---TTTCEEEEEETTT------------------STHHHHHTTCCS--
T ss_pred CCCcEEEE-EECCCCHHHHHHHHHHHHHHHHc---cCCEEEEEEeCCc------------------cHHHHHHcCCCc--
Confidence 34566665 55889999999999999999875 3467777777651 124678899887
Q ss_pred cceEEE--cCeEe--ccCC-ChhhHHHHHHcCC
Q 023845 120 TPQLVF--QGRVQ--CQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~-~~~~~~~~i~~~~ 147 (276)
+|++++ ||+.. ..|. +.+.+.+.|++.+
T Consensus 119 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 119 IPAFILFHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 999888 89874 3443 5677887777654
No 101
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.17 E-value=0.00069 Score=53.29 Aligned_cols=83 Identities=11% Similarity=0.162 Sum_probs=60.7
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
..++++|| .|++.+|+.|-.....|.+|++++ ++|..+.+.+| .....++.+++..
T Consensus 35 ~~~k~vvv-~F~a~wC~~C~~~~p~l~~l~~~~----~~v~~~~vd~d------------------~~~~l~~~~~v~~- 90 (125)
T 1r26_A 35 SEDILTVA-WFTAVWCGPCKTIERPMEKIAYEF----PTVKFAKVDAD------------------NNSEIVSKCRVLQ- 90 (125)
T ss_dssp HSSSCEEE-EEECTTCHHHHHTHHHHHHHHHHC----TTSEEEEEETT------------------TCHHHHHHTTCCS-
T ss_pred ccCCEEEE-EEECCcCHhHHHHHHHHHHHHHHC----CCCEEEEEECC------------------CCHHHHHHcCCCc-
Confidence 34456666 566789999999999999998864 46777777665 1245678889887
Q ss_pred CcceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 119 FTPQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 119 YTPq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
+|++++ ||+.. ..|.+.+.+...|.+.
T Consensus 91 -~Pt~~i~~~G~~~~~~~G~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 -LPTFIIARSGKMLGHVIGANPGMLRQKLRDI 121 (125)
T ss_dssp -SSEEEEEETTEEEEEEESSCHHHHHHHHHHH
T ss_pred -ccEEEEEeCCeEEEEEeCCCHHHHHHHHHHH
Confidence 999988 89763 3566677777777653
No 102
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.15 E-value=0.00061 Score=58.77 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=63.2
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccC----------------CCCCC-------CC-
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDY----------------MGWKD-------PY- 97 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDy----------------lGWkD-------~f- 97 (276)
..++|-.|+...|++|-.....|.++.+. .-.|+.+.|.+.-++. .-|.| ++
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 46788899999999999999999998752 1233333333210000 00100 00
Q ss_pred CCccccHHHHHHHHHhCCCCCCcceEEE-cCeEeccCCChhhHHHHHHcC
Q 023845 98 GSSQWTVRQKAYVEALNLDTMFTPQLVF-QGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 98 a~~~~t~Rq~~Y~~~~g~~~vYTPq~vV-nG~~~~~g~~~~~~~~~i~~~ 146 (276)
.-+...+++..+++.+|+++ ||+++| ||+...+..+.+.+...|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~g--tPt~v~~dG~~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSG--TPAVVLSNGTLVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCS--SSEEECTTSCEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCc--cCEEEEcCCeEecCCCCHHHHHHHHHHh
Confidence 01234567788899999998 999999 887554444677888877654
No 103
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.15 E-value=0.00094 Score=50.95 Aligned_cols=82 Identities=17% Similarity=0.325 Sum_probs=58.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||. |++.+|++|-.....|.++.+++ +++..+.+++|- .....+++++..
T Consensus 33 ~~~~~vv~-f~~~~C~~C~~~~~~l~~~~~~~----~~~~~~~vd~~~------------------~~~~~~~~~v~~-- 87 (122)
T 2vlu_A 33 AKKLVVID-FTASWCGPCRIMAPVFADLAKKF----PNAVFLKVDVDE------------------LKPIAEQFSVEA-- 87 (122)
T ss_dssp TTCCEEEE-EECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------CHHHHHHTTCCS--
T ss_pred cCCEEEEE-EECCCCHHHHHHHHHHHHHHHHC----CCcEEEEEECCC------------------CHHHHHHcCCCc--
Confidence 34566665 55789999999999999998875 346666665541 235677889887
Q ss_pred cceEEE--cCeEe--ccCCChhhHHHHHHcC
Q 023845 120 TPQLVF--QGRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~~~~~~~~~i~~~ 146 (276)
+|++++ ||+.. ..|...+.+...|++.
T Consensus 88 ~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~ 118 (122)
T 2vlu_A 88 MPTFLFMKEGDVKDRVVGAIKEELTAKVGLH 118 (122)
T ss_dssp SSEEEEEETTEEEEEEESSCHHHHHHHHHHH
T ss_pred ccEEEEEeCCEEEEEEeCcCHHHHHHHHHHH
Confidence 999888 88763 3455566677777654
No 104
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.15 E-value=0.001 Score=49.12 Aligned_cols=82 Identities=16% Similarity=0.198 Sum_probs=57.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++| .|++.+|++|-.....|.++++.+ .+++..+.+++| ......+.+++.+ +
T Consensus 21 ~~~~lv-~f~~~~C~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~------------------~~~~~~~~~~i~~--~ 76 (109)
T 3tco_A 21 NKLVLV-DCWAEWCAPCHLYEPIYKKVAEKY---KGKAVFGRLNVD------------------ENQKIADKYSVLN--I 76 (109)
T ss_dssp SSEEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTSEEEEEETT------------------TCHHHHHHTTCCS--S
T ss_pred CCeEEE-EEECCCCHHHHhhhHHHHHHHHHh---CCCceEEEEccc------------------cCHHHHHhcCccc--C
Confidence 455555 566889999999999999999875 346666666654 1235678889888 8
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i~~~ 146 (276)
|++++ ||+... .|. +.+.+.+.|++.
T Consensus 77 Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 77 PTTLIFVNGQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEcCCcEEEeeeccCCHHHHHHHHHHH
Confidence 98555 887543 343 567777777654
No 105
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.14 E-value=0.0011 Score=49.57 Aligned_cols=80 Identities=20% Similarity=0.270 Sum_probs=57.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ +++..+.+.+|- ....++.+++.. +
T Consensus 21 ~~~v~v-~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~~vd~~~------------------~~~~~~~~~v~~--~ 75 (107)
T 1gh2_A 21 SRLAVV-KFTMRGCGPCLRIAPAFSSMSNKY----PQAVFLEVDVHQ------------------CQGTAATNNISA--T 75 (107)
T ss_dssp TSCEEE-EEECSSCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------SHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCChhhHHHHHHHHHHHHHC----CCcEEEEEECcc------------------CHHHHHhcCCCc--c
Confidence 455555 577889999999999999999865 467776666641 134677889887 8
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|.+..++...|++
T Consensus 76 Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 104 (107)
T 1gh2_A 76 PTFQFFRNKVRIDQYQGADAVGLEEKIKQ 104 (107)
T ss_dssp SEEEEEETTEEEEEEESSCHHHHHHHHHH
T ss_pred cEEEEEECCeEEEEEeCCCHHHHHHHHHH
Confidence 98766 78754 356666667666654
No 106
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.13 E-value=0.00054 Score=60.32 Aligned_cols=100 Identities=16% Similarity=0.174 Sum_probs=63.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee---------------------cccCCC--C----
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD---------------------YWDYMG--W---- 93 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd---------------------YWDylG--W---- 93 (276)
+.++.|.+|++-.|++|=.....|.++.+. .+|-..-+++. ||++.. .
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-----g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~ 170 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS-----GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLK 170 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT-----TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC-----CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCC
Confidence 346889999999999999999998887763 25544444442 232100 0
Q ss_pred CCCCC--Cc---cccHHHHHHHHHhCCCCCCcceEEEc---CeE-eccCC-ChhhHHHHHHcCC
Q 023845 94 KDPYG--SS---QWTVRQKAYVEALNLDTMFTPQLVFQ---GRV-QCQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 94 kD~fa--~~---~~t~Rq~~Y~~~~g~~~vYTPq~vVn---G~~-~~~g~-~~~~~~~~i~~~~ 147 (276)
-|+.+ ++ ...+++...++.+|+++ ||.++|+ |+. ...|. +.+.+...|.+..
T Consensus 171 l~~~~~~~~~~~~~v~~~~~l~~~~gv~g--tPt~vi~~~~G~~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 171 LNVPANVSTEQMKVLSDNEKLMDDLGANV--TPAIYYMSKENTLQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHTCCS--SCEEEEEETTTEEEEEESSCCHHHHHHHTTC--
T ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCCC--CCEEEEECCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 01111 11 13456677889999998 9999997 552 34554 6777887776654
No 107
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.12 E-value=0.0028 Score=48.74 Aligned_cols=82 Identities=17% Similarity=0.170 Sum_probs=54.3
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ .+.+..+.+++| ......+++++.. +
T Consensus 35 ~~~~lv-~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~~~vd~~------------------~~~~l~~~~~v~~--~ 90 (130)
T 2dml_A 35 DGLWLV-EFYAPWCGHCQRLTPEWKKAATAL---KDVVKVGAVNAD------------------KHQSLGGQYGVQG--F 90 (130)
T ss_dssp SSCEEE-EEECTTCSTTGGGHHHHHHHHHHT---TTTSEEEEEETT------------------TCHHHHHHHTCCS--S
T ss_pred CCeEEE-EEECCCCHHHHhhCHHHHHHHHHh---cCceEEEEEeCC------------------CCHHHHHHcCCCc--c
Confidence 445555 677889999999999999998865 334666666554 1245677889887 9
Q ss_pred ceEEE---cCe--EeccCC-ChhhHHHHHHcC
Q 023845 121 PQLVF---QGR--VQCQGN-DQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV---nG~--~~~~g~-~~~~~~~~i~~~ 146 (276)
|++++ +|. ....|. +.+.+...|.+.
T Consensus 91 Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 122 (130)
T 2dml_A 91 PTIKIFGANKNKPEDYQGGRTGEAIVDAALSA 122 (130)
T ss_dssp SEEEEESSCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred CEEEEEeCCCCeEEEeecCCCHHHHHHHHHHH
Confidence 99877 332 223343 455666666553
No 108
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.11 E-value=0.00089 Score=52.87 Aligned_cols=101 Identities=12% Similarity=0.153 Sum_probs=63.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||..| +.+|+.|......|.++.+++. ..+|..+.+++|- ....|+. -+...+......+
T Consensus 25 ~gk~vlv~F~-~~~C~~C~~~~~~l~~~~~~~~--~~~v~vv~v~~d~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~ 97 (151)
T 2f9s_A 25 KGKGVFLNFW-GTWCEPCKKEFPYMANQYKHFK--SQGVEIVAVNVGESKIAVHNFMKSYGVN----FPVVLDTDRQVLD 97 (151)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHG--GGTEEEEEEEESCCHHHHHHHHHHHTCC----SCEEEETTSHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhc--cCCeEEEEEECCCCHHHHHHHHHHcCCC----ceEEECCchHHHH
Confidence 3467777655 8899999999999999987653 2357777777752 0111110 0112222234567
Q ss_pred HhCCCCCCcce-EEE--cCeEec--cCC-ChhhHHHHHHcCCCC
Q 023845 112 ALNLDTMFTPQ-LVF--QGRVQC--QGN-DQDGMLSAIANAPKF 149 (276)
Q Consensus 112 ~~g~~~vYTPq-~vV--nG~~~~--~g~-~~~~~~~~i~~~~~~ 149 (276)
.+++.. +|+ ++| ||+... .|. +.+.+...|++.++.
T Consensus 98 ~~~v~~--~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 98 AYDVSP--LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp HTTCCS--SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred hcCCCC--CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 788876 899 566 566543 243 577888888876654
No 109
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.09 E-value=0.0013 Score=51.75 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=58.1
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
+|=.|++.+|++|-.....|.++++++ .++|..+.++++- .....+.+++.. +|+++
T Consensus 53 vvv~f~~~~C~~C~~~~~~l~~l~~~~---~~~v~~~~vd~~~------------------~~~l~~~~~v~~--~Pt~~ 109 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVSPILEELARDH---AGRLKVVKVNVDE------------------HPGLAARYGVRS--VPTLV 109 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHT---TTTEEEEEEETTT------------------CHHHHHHTTCCS--SSEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHc---cCceEEEEEECCC------------------CHHHHHHCCCCc--cCEEE
Confidence 555677889999999999999999875 3467777777651 134677888887 99988
Q ss_pred E--cCeEe--ccCC-ChhhHHHHHHcC
Q 023845 125 F--QGRVQ--CQGN-DQDGMLSAIANA 146 (276)
Q Consensus 125 V--nG~~~--~~g~-~~~~~~~~i~~~ 146 (276)
+ ||+.. ..|. +.+.+...|.+.
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 8 89864 3443 466777777654
No 110
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.09 E-value=0.00078 Score=53.10 Aligned_cols=85 Identities=12% Similarity=0.230 Sum_probs=60.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++++++ .++|..+.+.+|- .....+++++.. +
T Consensus 38 ~k~~lv-~f~a~wC~~C~~~~~~l~~l~~~~---~~~v~~~~vd~~~------------------~~~l~~~~~v~~--~ 93 (136)
T 2l5l_A 38 DKPAIV-DFYADWCGPCKMVAPILDELAKEY---DGQIVIYKVDTEK------------------EQELAGAFGIRS--I 93 (136)
T ss_dssp SSCEEE-EEECTTSHHHHHHHHHHHHHHHHT---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCcCHHHHHHHHHHHHHHHHh---cCCEEEEEEeCCC------------------CHHHHHHcCCCC--C
Confidence 345555 566789999999999999998875 3467776666541 235677889887 9
Q ss_pred ceEEE---cCeEe--ccCCChhhHHHHHHcCCCC
Q 023845 121 PQLVF---QGRVQ--CQGNDQDGMLSAIANAPKF 149 (276)
Q Consensus 121 Pq~vV---nG~~~--~~g~~~~~~~~~i~~~~~~ 149 (276)
|++++ ||+.. .++.+.+.+...|++....
T Consensus 94 Pt~~~~~~~G~~~~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 94 PSILFIPMEGKPEMAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp CEEEEECSSSCCEEEESCCCHHHHHHHHHHHHTS
T ss_pred CEEEEECCCCcEEEEeCCCCHHHHHHHHHHHhhc
Confidence 99765 67652 3344678888888876543
No 111
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.08 E-value=0.002 Score=50.55 Aligned_cols=100 Identities=9% Similarity=0.149 Sum_probs=60.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc--------CCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD--------YMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD--------ylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||. |.+.+|+.|......|.++.+++. ..++..+++.+|--+ ..++.- .+...+......+
T Consensus 29 ~gk~~lv~-f~~~~C~~C~~~~~~l~~l~~~~~--~~~~~~v~v~~d~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~ 102 (152)
T 2lja_A 29 KGKYIYID-VWATWCGPCRGELPALKELEEKYA--GKDIHFVSLSCDKNKKAWENMVTKDQLKG---IQLHMGTDRTFMD 102 (152)
T ss_dssp TTSEEEEE-ECCSSCCGGGGTHHHHHHHHHHST--TSSEEEEEEECCSCHHHHHHHHHHHTCCS---EEEECSSCTHHHH
T ss_pred CCCEEEEE-EECCcCHhHHHHhHHHHHHHHHhc--cCCeEEEEEEccCcHHHHHHHHHhcCCCC---ceeecCcchhHHH
Confidence 34567665 558999999999999999988763 346888888776311 000000 0001111224567
Q ss_pred HhCCCCCCcceEEE---cCeEecc--C-CChhhHHHHHHcCC
Q 023845 112 ALNLDTMFTPQLVF---QGRVQCQ--G-NDQDGMLSAIANAP 147 (276)
Q Consensus 112 ~~g~~~vYTPq~vV---nG~~~~~--g-~~~~~~~~~i~~~~ 147 (276)
.+++.. +|.++| ||+.... | .+.+.+.+.|++..
T Consensus 103 ~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 103 AYLING--IPRFILLDRDGKIISANMTRPSDPKTAEKFNELL 142 (152)
T ss_dssp HTTCCS--SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHH
T ss_pred HcCcCC--CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHh
Confidence 788776 898666 6765543 2 24567777777654
No 112
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.08 E-value=0.0017 Score=51.62 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=58.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh------
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL------ 113 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~------ 113 (276)
..+++||..| +.+|+.|......|.++.+++. ..+|..+++.+|- ..+..+.|.+.+
T Consensus 33 ~gk~vlv~f~-~~~C~~C~~~~~~l~~l~~~~~--~~~v~~v~v~~d~--------------~~~~~~~~~~~~~~~~~~ 95 (165)
T 3or5_A 33 KGKAYIVNFF-ATWCPPCRSEIPDMVQVQKTWA--SRGFTFVGIAVNE--------------QLPNVKNYMKTQGIIYPV 95 (165)
T ss_dssp TTCEEEEEEE-CTTSHHHHHHHHHHHHHHHHHT--TTTEEEEEEECSC--------------CHHHHHHHHHHHTCCSCE
T ss_pred CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhc--cCCeEEEEEECCC--------------CHHHHHHHHHHcCCCCce
Confidence 3467777666 9999999999999999988763 3358888887761 122333343333
Q ss_pred -----------------CCCCCCcce-EEE--cCeEec--cC-CChhhHHHHHHcCCC
Q 023845 114 -----------------NLDTMFTPQ-LVF--QGRVQC--QG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 114 -----------------g~~~vYTPq-~vV--nG~~~~--~g-~~~~~~~~~i~~~~~ 148 (276)
++. .+|+ ++| ||+... .| .+.+.+...|++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~i~--~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 96 MMATPELIRAFNGYIDGGIT--GIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp EECCHHHHHHHHTTSTTCSC--SSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred EecCHHHHHHHhhhhccCCC--CCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 444 4999 556 565432 23 347778888877654
No 113
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.00 E-value=0.0011 Score=54.82 Aligned_cols=100 Identities=24% Similarity=0.349 Sum_probs=66.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee---------------------cccCC---CCCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD---------------------YWDYM---GWKDP 96 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd---------------------YWDyl---GWkD~ 96 (276)
+.++.|-+||.-.|++|-.+...|.+|.+ -.|+-..|.+. +|+.+ | +-+
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l~~------v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g-~~~ 85 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKMTD------VTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKG-KFP 85 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTCCS------EEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHC-CCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhcCc------eEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCC-CCC
Confidence 34688899999999999999988876521 13333333331 23210 1 000
Q ss_pred CCCc---cccHHHHHHHHHhCCCCCCcceEEE-cCeEeccCCChhhHHHHHHcCCCC
Q 023845 97 YGSS---QWTVRQKAYVEALNLDTMFTPQLVF-QGRVQCQGNDQDGMLSAIANAPKF 149 (276)
Q Consensus 97 fa~~---~~t~Rq~~Y~~~~g~~~vYTPq~vV-nG~~~~~g~~~~~~~~~i~~~~~~ 149 (276)
-.++ ...++....++.+|+++ ||+++| ||+...+..+.+.+.++|.+..+.
T Consensus 86 ~~~~~~~~~v~~~~~la~~~gI~g--tPt~vi~nG~~i~G~~~~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 86 VGGSICDNPVAETTSLGEQFGFNG--TPTLVFPNGRTQSGYSPMPQLEEIIRKNQQE 140 (147)
T ss_dssp TTCCCCSCSHHHHHHHHHHTTCCS--SCEEECTTSCEEESCCCTTHHHHHHHHTSCC
T ss_pred CccHHHHHHHHHHHHHHHHhCCCc--cCEEEEECCEEeeCCCCHHHHHHHHHHHHHh
Confidence 0011 23556788899999999 999999 898655555788999999987764
No 114
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=96.99 E-value=0.0026 Score=49.95 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=61.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||..| +.+|+.|......|.++.+++. ..++..+.+.+|- .+..++. -+.+.+......+
T Consensus 27 ~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~--~~~~~~v~v~~d~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~ 99 (152)
T 3gl3_A 27 TGSVVYLDFW-ASWCGPCRQSFPWMNQMQAKYK--AKGFQVVAVNLDAKTGDAMKFLAQVPAE----FTVAFDPKGQTPR 99 (152)
T ss_dssp TTSEEEEEEE-CTTCTHHHHHHHHHHHHHHHHG--GGTEEEEEEECCSSHHHHHHHHHHSCCC----SEEEECTTCHHHH
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHhh--cCCeEEEEEECCCCHHHHHHHHHHcCCC----CceeECCcchhHH
Confidence 3456666666 8999999999999999988763 2347778887762 1111110 0111111224567
Q ss_pred HhCCCCCCcce-EEE--cCeEec--cC---CChhhHHHHHHcCCCC
Q 023845 112 ALNLDTMFTPQ-LVF--QGRVQC--QG---NDQDGMLSAIANAPKF 149 (276)
Q Consensus 112 ~~g~~~vYTPq-~vV--nG~~~~--~g---~~~~~~~~~i~~~~~~ 149 (276)
.+++.. +|. ++| +|+... .| .+.+.+.+.|++.+..
T Consensus 100 ~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 100 LYGVKG--MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp HTTCCS--SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred HcCCCC--CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 788877 999 677 465432 33 2346788888876643
No 115
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.97 E-value=0.0014 Score=54.05 Aligned_cols=63 Identities=19% Similarity=0.214 Sum_probs=44.0
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|.+|+..+|+.|..+..+|.++.-.+ . .+.||- .+...+.+..+.+.+|.++ +|+++|
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~i~~-----~----~vdId~-----------~~~~~~~~~~L~~~~g~~t--vP~ifi 108 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMNVNY-----K----VVELDL-----------LEYGNQFQDALYKMTGERT--VPRIFV 108 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTCCC-----E----EEEGGG-----------CTTHHHHHHHHHHHHSCCC--SCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCe-----E----EEECcc-----------CcCCHHHHHHHHHHhCCCC--cCeEEE
Confidence 34499999999999999999986532 1 133331 1112344556778889888 999999
Q ss_pred cCeEe
Q 023845 126 QGRVQ 130 (276)
Q Consensus 126 nG~~~ 130 (276)
||+..
T Consensus 109 ~G~~i 113 (146)
T 2ht9_A 109 NGTFI 113 (146)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 99754
No 116
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=96.95 E-value=0.0046 Score=47.89 Aligned_cols=44 Identities=7% Similarity=0.087 Sum_probs=33.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.++++||..| +.+|+.|......|.++.+++. ..+|..+++++|
T Consensus 30 ~gk~vll~f~-~~~C~~C~~~~~~l~~l~~~~~--~~~~~~v~v~~d 73 (148)
T 3hcz_A 30 QAKYTILFFW-DSQCGHCQQETPKLYDWWLKNR--AKGIQVYAANIE 73 (148)
T ss_dssp CCSEEEEEEE-CGGGCTTCSHHHHHHHHHHHHG--GGTEEEEEEECC
T ss_pred CCCEEEEEEE-CCCCccHHHHHHHHHHHHHHhc--cCCEEEEEEEec
Confidence 3456777655 7799999999999999987763 235888888876
No 117
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.94 E-value=0.0019 Score=48.81 Aligned_cols=97 Identities=15% Similarity=0.281 Sum_probs=58.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-------------ccCCCCCCCCCCccccHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-------------WDYMGWKDPYGSSQWTVRQ 106 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-------------WDylGWkD~fa~~~~t~Rq 106 (276)
.++++||. |.+.+|++|......|.++.+++ .+++..+.++.+. ....|+. .-+...+..
T Consensus 21 ~gk~~lv~-f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~ 93 (138)
T 4evm_A 21 KGKKVYLK-FWASWCSICLASLPDTDEIAKEA---GDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYK---NLPVLVDPS 93 (138)
T ss_dssp TTSEEEEE-ECCTTCHHHHHHHHHHHHHHHTC---TTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCT---TCCEEECTT
T ss_pred CCCEEEEE-EEcCcCHHHHHHHHHHHHHHHHh---CCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCC---CeeEEECcc
Confidence 34566665 55889999999999999999875 4578888875321 1111110 111122223
Q ss_pred HHHHHHhCCCCCCcceEEE---cCeEec--cC-CChhhHHHHHHc
Q 023845 107 KAYVEALNLDTMFTPQLVF---QGRVQC--QG-NDQDGMLSAIAN 145 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vV---nG~~~~--~g-~~~~~~~~~i~~ 145 (276)
....+.+++.. +|.++| ||+... .| .+.+.+.+.|++
T Consensus 94 ~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRS--YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCS--SSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCccc--CCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 35677788776 898555 565432 23 346667766654
No 118
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=96.93 E-value=0.0015 Score=51.83 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=61.6
Q ss_pred CCceEEEEecCCCCCCCHH-HHHHHHHhcccCCCCCCCEEEEEEeeec--------------ccCCCCCCCCCCccccHH
Q 023845 41 GGAVLVELFSSQGCKTSPE-AEILVSRLGRGDFELGVPVIVLAYHVDY--------------WDYMGWKDPYGSSQWTVR 105 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~-Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------------WDylGWkD~fa~~~~t~R 105 (276)
++++||+.| +.+|+.|.. +-..|.+|.+++. ..+|..+++++|+ ....|+. | |...+.
T Consensus 28 gk~vlv~f~-a~wC~~C~~~~~~~l~~l~~~~~--~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~d~ 100 (158)
T 3eyt_A 28 GKVIVIEAF-QMLCPGCVMHGIPLAQKVRAAFP--EDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIK--F--PVGVDQ 100 (158)
T ss_dssp TSEEEEEEE-CTTCHHHHHTHHHHHHHHHHHSC--TTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCC--S--CEEEEC
T ss_pred CCEEEEEEE-CCcCcchhhhhhHHHHHHHHHhC--cCCEEEEEEEecccccccCCHHHHHHHHHHcCCC--c--eEEEcC
Confidence 467777766 579999999 6899999998763 3579999998862 1111111 0 000111
Q ss_pred HH-----HHHHHhCCCCCCcce-EEE--cCeEec--cC-CChhhHHHHHHcCCCCC
Q 023845 106 QK-----AYVEALNLDTMFTPQ-LVF--QGRVQC--QG-NDQDGMLSAIANAPKFP 150 (276)
Q Consensus 106 q~-----~Y~~~~g~~~vYTPq-~vV--nG~~~~--~g-~~~~~~~~~i~~~~~~~ 150 (276)
.. ..++.+|+.. +|. ++| ||+... .| .+.+.+...|++.+..+
T Consensus 101 ~~~~~~~~~~~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~ 154 (158)
T 3eyt_A 101 PGDGAMPRTMAAYQMRG--TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEA 154 (158)
T ss_dssp CCSSSSCHHHHHTTCCS--SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSC
T ss_pred ccchhhHHHHHHcCCCC--CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhccC
Confidence 11 3566777766 896 555 565433 23 35667777777765443
No 119
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=96.93 E-value=0.00063 Score=53.55 Aligned_cols=81 Identities=16% Similarity=0.267 Sum_probs=56.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++++++ .++|..+.+.+|- .+ ...+.+++.. +
T Consensus 40 ~k~vlv-~F~a~wC~~C~~~~p~l~~l~~~~---~~~v~~~~vd~~~-----------~~-------~l~~~~~v~~--~ 95 (128)
T 2o8v_B 40 DGAILV-DFWAEWCGPAKMIAPILDEIADEY---QGKLTVAKLNIDQ-----------NP-------GTAPKYGIRG--I 95 (128)
T ss_dssp SSEEEE-EEECSSCHHHHHTHHHHHHHHHHT---TTTEEEEEEETTT-----------CC-------TTSGGGTCCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHhHHHHHHHHHh---cCCeEEEEEECCC-----------CH-------HHHHHcCCCc--c
Confidence 444554 677889999999999999998865 3468777777652 11 2344577776 9
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHc
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIAN 145 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~ 145 (276)
|++++ ||+.. ..|. +.+.+.+.|++
T Consensus 96 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 125 (128)
T 2o8v_B 96 PTLLLFKNGEVAATKVGALSKGQLKEFLDA 125 (128)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred CEEEEEeCCEEEEEEcCCCCHHHHHHHHHH
Confidence 99988 99864 3343 46677777764
No 120
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=96.88 E-value=0.0022 Score=50.45 Aligned_cols=100 Identities=19% Similarity=0.263 Sum_probs=61.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc---------cCCCCCCCCCCccccHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW---------DYMGWKDPYGSSQWTVRQKAYV 110 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW---------DylGWkD~fa~~~~t~Rq~~Y~ 110 (276)
.++++||..| +.+|+.|......|.++.+++. ..++..+++.+|-= +..|+. -+.+.+.....+
T Consensus 27 ~gk~vll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~v~~d~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~ 99 (154)
T 3kcm_A 27 KGQVVIVNFW-ATWCPPCREEIPSMMRLNAAMA--GKPFRMLCVSIDEGGKVAVEEFFRKTGFT----LPVLLDADKRVG 99 (154)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHTT--TSSEEEEEEECCTTHHHHHHHHHHHHCCC----CCEEECTTCHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhc--cCCeEEEEEEcCCcchHHHHHHHHHcCCC----eeEEecCchHHH
Confidence 3456666666 8999999999999999988763 34688888887731 001110 011122223456
Q ss_pred HHhCCCCCCcc-eEEEc--CeEec--cCC---ChhhHHHHHHcCCC
Q 023845 111 EALNLDTMFTP-QLVFQ--GRVQC--QGN---DQDGMLSAIANAPK 148 (276)
Q Consensus 111 ~~~g~~~vYTP-q~vVn--G~~~~--~g~---~~~~~~~~i~~~~~ 148 (276)
+.+++.. +| .++|| |+... .|. +...+...|++...
T Consensus 100 ~~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 100 KLYGTTG--VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp HHHTCCS--BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred HHhCCCC--CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 7788876 89 68885 54422 233 45678888877654
No 121
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.86 E-value=0.01 Score=50.08 Aligned_cols=84 Identities=15% Similarity=0.192 Sum_probs=57.1
Q ss_pred cCCceEEEEecCC-CCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 40 RGGAVLVELFSSQ-GCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 40 ~~~~vvVElFTSq-GCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
...+++|.+|++. +|++|......|.+|++. .++|....+.++ .......++.+|+.+
T Consensus 20 ~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~----~~~v~~~~vd~~----------------~~~~~~~~~~~~v~~- 78 (226)
T 1a8l_A 20 MVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL----TDKLSYEIVDFD----------------TPEGKELAKRYRIDR- 78 (226)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT----CTTEEEEEEETT----------------SHHHHHHHHHTTCCS-
T ss_pred cCCCeEEEEEecCCCCchhHHHHHHHHHHHhh----CCceEEEEEeCC----------------CcccHHHHHHcCCCc-
Confidence 3456777889999 999999999999999874 346655544443 222466789999997
Q ss_pred CcceEEE--cCeE---eccCCC-hhhHHHHHHc
Q 023845 119 FTPQLVF--QGRV---QCQGND-QDGMLSAIAN 145 (276)
Q Consensus 119 YTPq~vV--nG~~---~~~g~~-~~~~~~~i~~ 145 (276)
+|++++ ||.. ...|.. ...+...+..
T Consensus 79 -~Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~ 110 (226)
T 1a8l_A 79 -APATTITQDGKDFGVRYFGLPAGHEFAAFLED 110 (226)
T ss_dssp -SSEEEEEETTBCCSEEEESCCCTTHHHHHHHH
T ss_pred -CceEEEEcCCceeeEEEeccCcHHHHHHHHHH
Confidence 999888 6742 333432 3444444443
No 122
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=96.83 E-value=0.0013 Score=53.95 Aligned_cols=63 Identities=19% Similarity=0.190 Sum_probs=42.4
Q ss_pred EEEecC-----CCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 46 VELFSS-----QGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 46 VElFTS-----qGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
|.+|+. .+|+.|..|.++|.++.-.+ -.++|+ .++ +.+..+.+..|.++ +
T Consensus 37 Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y---------~~vdI~-----------~d~---~~~~~L~~~~G~~t--v 91 (135)
T 2wci_A 37 ILLYMKGSPKLPSCGFSAQAVQALAACGERF---------AYVDIL-----------QNP---DIRAELPKYANWPT--F 91 (135)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHTTCSCC---------EEEEGG-----------GCH---HHHHHHHHHHTCCS--S
T ss_pred EEEEEEecCCCCCCccHHHHHHHHHHcCCce---------EEEECC-----------CCH---HHHHHHHHHHCCCC--c
Confidence 667888 89999999999999864422 112332 122 34455556667766 9
Q ss_pred ceEEEcCeEeccCC
Q 023845 121 PQLVFQGRVQCQGN 134 (276)
Q Consensus 121 Pq~vVnG~~~~~g~ 134 (276)
|+++|||+. ++|.
T Consensus 92 P~VfI~G~~-iGG~ 104 (135)
T 2wci_A 92 PQLWVDGEL-VGGC 104 (135)
T ss_dssp CEEEETTEE-EESH
T ss_pred CEEEECCEE-EECh
Confidence 999999975 4443
No 123
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.81 E-value=0.0019 Score=51.22 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=60.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| +|++.+|+.|-.....|.+|++++ .++|..+.+.+|- .....+.+++.. +
T Consensus 24 ~~~vlv-~F~a~wC~~C~~~~~~l~~l~~~~---~~~v~~~~vd~~~------------------~~~l~~~~~v~~--~ 79 (140)
T 3hz4_A 24 KKPVVV-MFYSPACPYCKAMEPYFEEYAKEY---GSSAVFGRINIAT------------------NPWTAEKYGVQG--T 79 (140)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHH---TTTSEEEEEETTT------------------CHHHHHHHTCCE--E
T ss_pred CCcEEE-EEECCCChhHHHHHHHHHHHHHHh---CCceEEEEEECCc------------------CHhHHHHCCCCc--C
Confidence 455666 566889999999999999999876 3457777776641 135677889887 9
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~~~ 147 (276)
|++++ ||+.. ..|. +.+.+.+.|.+.+
T Consensus 80 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 80 PTFKFFCHGRPVWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp SEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred CEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 99988 88864 3343 4677777777654
No 124
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.84 E-value=0.00019 Score=52.55 Aligned_cols=66 Identities=21% Similarity=0.283 Sum_probs=46.3
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++| +|++.+|++|-.....|.++.+++ .+++..+.+++|- .....+.+++.. +
T Consensus 19 ~~~~~v-~f~~~~C~~C~~~~~~~~~~~~~~---~~~~~~~~v~~~~------------------~~~~~~~~~v~~--~ 74 (106)
T 2yj7_A 19 DKPVLV-DFWAPWCGPCRMIAPIIEELAKEY---EGKVKVVKVNVDE------------------NPNTAAQYGIRS--I 74 (106)
Confidence 445555 566899999999999999998865 2356666555541 234566677776 9
Q ss_pred ceEEE--cCeEe
Q 023845 121 PQLVF--QGRVQ 130 (276)
Q Consensus 121 Pq~vV--nG~~~ 130 (276)
|++++ ||+..
T Consensus 75 Pt~~~~~~g~~~ 86 (106)
T 2yj7_A 75 PTLLLFKNGQVV 86 (106)
Confidence 99888 77653
No 125
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.80 E-value=0.0036 Score=52.90 Aligned_cols=86 Identities=14% Similarity=0.227 Sum_probs=59.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCC-CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFE-LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~-~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
.+++++|-.|.+.+|++|......+.+|++++.. ..++|....+.++ ......+.+++++
T Consensus 132 ~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~------------------~~~~l~~~~~v~~- 192 (226)
T 1a8l_A 132 IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI------------------EYPEWADQYNVMA- 192 (226)
T ss_dssp CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG------------------GCHHHHHHTTCCS-
T ss_pred cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc------------------cCHHHHHhCCCcc-
Confidence 3466767788899999999999999999876410 0137777777665 1234678899988
Q ss_pred CcceEEE--cCe--EeccCC-ChhhHHHHHHc
Q 023845 119 FTPQLVF--QGR--VQCQGN-DQDGMLSAIAN 145 (276)
Q Consensus 119 YTPq~vV--nG~--~~~~g~-~~~~~~~~i~~ 145 (276)
+|++++ ||+ ....|. +.+.+...|.+
T Consensus 193 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 223 (226)
T 1a8l_A 193 -VPKIVIQVNGEDRVEFEGAYPEKMFLEKLLS 223 (226)
T ss_dssp -SCEEEEEETTEEEEEEESCCCHHHHHHHHHH
T ss_pred -cCeEEEEeCCceeEEEcCCCCHHHHHHHHHH
Confidence 899888 343 334454 35556666654
No 126
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.78 E-value=0.0026 Score=49.02 Aligned_cols=82 Identities=21% Similarity=0.306 Sum_probs=60.3
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++++++ +++..+.+.++- .....+.+++.. +
T Consensus 23 ~~~vlv-~f~a~wC~~C~~~~~~l~~l~~~~----~~v~~~~vd~~~------------------~~~~~~~~~i~~--~ 77 (118)
T 2f51_A 23 PGLVLV-DFFATWCGPCQRLGQILPSIAEAN----KDVTFIKVDVDK------------------NGNAADAYGVSS--I 77 (118)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHC----TTSEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHHHHHHHHHHHC----CCeEEEEEECCC------------------CHHHHHhcCCCC--C
Confidence 455555 577899999999999999998864 467777776651 134678899887 8
Q ss_pred ceEEE--c----CeE--eccCCChhhHHHHHHcCC
Q 023845 121 PQLVF--Q----GRV--QCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--n----G~~--~~~g~~~~~~~~~i~~~~ 147 (276)
|++++ + |+. ...|....++.+.|.+..
T Consensus 78 Pt~~~~~~~~~~G~~~~~~~G~~~~~l~~~~~~~~ 112 (118)
T 2f51_A 78 PALFFVKKEGNEIKTLDQFVGADVSRIKADIEKFK 112 (118)
T ss_dssp SEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHHC
T ss_pred CEEEEEeCCCCcceEEEeecCCCHHHHHHHHHHhh
Confidence 99776 5 655 357777788888887654
No 127
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=96.73 E-value=0.0022 Score=49.90 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=56.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHH---hcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSR---LGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKA 108 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~---l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~ 108 (276)
.++++||. |.+..|+.|......|.+ |.+++. ..++..+++++|. ....|+ .-+...+....
T Consensus 26 ~gk~vll~-F~a~~C~~C~~~~~~l~~~~~l~~~~~--~~~~~~v~v~~d~~~~~~~~~~~~~~~----~~~~~~d~~~~ 98 (142)
T 3ewl_A 26 KAQYTMLF-FYDPDCSNCRKFEKLFAEIPAFVEMVE--NGTLRVLAIYPDENREEWATKAVYMPQ----GWIVGWNKAGD 98 (142)
T ss_dssp CCSEEEEE-ECCSSCHHHHHHHHHHHTCHHHHHHHH--HTSEEEEEEECSSCHHHHHHHHTTSCT----TCEEEECTTCH
T ss_pred CCCEEEEE-EECCCCccHHHHHHHHHHhHHHHHHhc--cCCeEEEEEEecCCHHHHHHHHHHcCC----CcceeeCCccc
Confidence 34567776 558899999998777777 665542 2468888888762 011111 00111111111
Q ss_pred H--HHHhCCCCCCcce-EEE--cCeEeccCCChhhHHHHHHcC
Q 023845 109 Y--VEALNLDTMFTPQ-LVF--QGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 109 Y--~~~~g~~~vYTPq-~vV--nG~~~~~g~~~~~~~~~i~~~ 146 (276)
. ++.+++.. +|. ++| +|+....+.+.+.+.+.|++.
T Consensus 99 ~~~~~~~~v~~--~P~~~lid~~G~i~~~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 99 IRTRQLYDIRA--TPTIYLLDGRKRVILKDTSMEQLIDYLATQ 139 (142)
T ss_dssp HHHTTCSCCCS--SSEEEEECTTCBEEECSCCHHHHHHHHHC-
T ss_pred hhhHHHcCCCC--CCeEEEECCCCCEEecCCCHHHHHHHHHHH
Confidence 1 22567665 897 555 466666666678888887764
No 128
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.67 E-value=0.0093 Score=47.07 Aligned_cols=105 Identities=11% Similarity=0.135 Sum_probs=61.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee-------cccCCCCCCCCCCccccHHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD-------YWDYMGWKDPYGSSQWTVRQKAYVEA 112 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd-------YWDylGWkD~fa~~~~t~Rq~~Y~~~ 112 (276)
.++++||..| +..|+.|......|.++.+++. .++|..+++.+| |....|..=++.. ......+..++.
T Consensus 23 ~gk~vlv~F~-a~wC~~C~~~~~~l~~l~~~~~--~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 98 (151)
T 3raz_A 23 KAPVRIVNLW-ATWCGPCRKEMPAMSKWYKAQK--KGSVDMVGIALDTSDNIGNFLKQTPVSYPIWR-YTGANSRNFMKT 98 (151)
T ss_dssp CSSEEEEEEE-CTTCHHHHHHHHHHHHHHHTSC--TTTEEEEEEESSCHHHHHHHHHHSCCSSCEEE-ECCSCHHHHHHT
T ss_pred CCCEEEEEEE-cCcCHHHHHHHHHHHHHHHHhc--cCCeEEEEEECCChHHHHHHHHHcCCCCceEe-cCccchHHHHHH
Confidence 3456777655 8899999999999999988763 457888888886 1111111100000 011223445666
Q ss_pred hCCCCCCcce-EEE--cCeEe--ccCC-ChhhHHHHHHcCCC
Q 023845 113 LNLDTMFTPQ-LVF--QGRVQ--CQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 113 ~g~~~vYTPq-~vV--nG~~~--~~g~-~~~~~~~~i~~~~~ 148 (276)
+|.....+|. ++| +|+.. ..|. +.+.+.+.|++...
T Consensus 99 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 99 YGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp TTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred hCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 7722234895 666 45432 2333 56778777776543
No 129
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.69 E-value=0.00028 Score=54.64 Aligned_cols=86 Identities=22% Similarity=0.329 Sum_probs=54.0
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.++++||. |.+.+|+.|-.....| .++.+.. ..++..+.+.++ .+......+.+++.
T Consensus 18 ~~k~vlv~-f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~~vd~~----------------~~~~~~~~~~~~v~ 77 (130)
T 2lst_A 18 HGRMVMVY-FHSEHCPYCQQMNTFVLSDPGVSRLL---EARFVVASVSVD----------------TPEGQELARRYRVP 77 (130)
Confidence 34566665 6689999999988888 7887754 345666655553 12234566777877
Q ss_pred CCCcceEEE----cCeE----eccCC-ChhhHHHHHHcCC
Q 023845 117 TMFTPQLVF----QGRV----QCQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 117 ~vYTPq~vV----nG~~----~~~g~-~~~~~~~~i~~~~ 147 (276)
. +|++++ ||+. ...|. +.+.+...|++..
T Consensus 78 ~--~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 78 G--TPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 7 999776 4765 12332 3455555555544
No 130
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=96.64 E-value=0.0016 Score=51.14 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=44.7
Q ss_pred EEEecC-----CCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 46 VELFSS-----QGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 46 VElFTS-----qGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
|-+|+. .+||+|-.|.++|.++.-.+ -.++|+ .+ .+.+..+.+..|.++ +
T Consensus 18 Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y---------~~~di~-----------~d---~~~~~~l~~~~g~~t--v 72 (111)
T 3zyw_A 18 CMLFMKGTPQEPRCGFSKQMVEILHKHNIQF---------SSFDIF-----------SD---EEVRQGLKAYSSWPT--Y 72 (111)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHTTCCC---------EEEEGG-----------GC---HHHHHHHHHHHTCCS--S
T ss_pred EEEEEecCCCCCcchhHHHHHHHHHHcCCCe---------EEEECc-----------CC---HHHHHHHHHHHCCCC--C
Confidence 348999 99999999999999875422 113333 12 233344444557666 9
Q ss_pred ceEEEcCeEeccCCChhhHHHHH
Q 023845 121 PQLVFQGRVQCQGNDQDGMLSAI 143 (276)
Q Consensus 121 Pq~vVnG~~~~~g~~~~~~~~~i 143 (276)
|+++|||+ +++|. +.+..+.
T Consensus 73 P~ifi~g~-~iGG~--d~l~~l~ 92 (111)
T 3zyw_A 73 PQLYVSGE-LIGGL--DIIKELE 92 (111)
T ss_dssp CEEEETTE-EEECH--HHHHHHH
T ss_pred CEEEECCE-EEecH--HHHHHHH
Confidence 99999996 44553 4444433
No 131
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.63 E-value=0.0031 Score=48.49 Aligned_cols=82 Identities=12% Similarity=0.171 Sum_probs=58.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
+|=.|++.+|++|-.....|.++++++. ..+|..+.++++ ......+++++.. +|+++
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~v~~~~vd~~------------------~~~~~~~~~~v~~--~Pt~~ 82 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGE--DLEVNIAKVDVT------------------EQPGLSGRFIINA--LPTIY 82 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHG--GGTCEEEEEETT------------------TCHHHHHHTTCCS--SSEEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhc--cCCeEEEEEECc------------------CCHHHHHHcCCcc--cCEEE
Confidence 4556778899999999999999987642 236777666654 1134678889887 99988
Q ss_pred E--cCeEec-cC-CChhhHHHHHHcCCC
Q 023845 125 F--QGRVQC-QG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 125 V--nG~~~~-~g-~~~~~~~~~i~~~~~ 148 (276)
+ ||+... .| .+.+.+...|.+...
T Consensus 83 ~~~~G~~~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 83 HCKDGEFRRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp EEETTEEEECCSCCCHHHHHHHHHTCGG
T ss_pred EEeCCeEEEeecCCCHHHHHHHHHHHhh
Confidence 7 887422 33 356778888887653
No 132
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.62 E-value=0.0059 Score=47.93 Aligned_cols=86 Identities=19% Similarity=0.330 Sum_probs=59.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDT 117 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~ 117 (276)
++++||. |.+.+|+.|-.....+ .++.+.+ +++..+.+.++- ..+......+.+++..
T Consensus 31 ~k~vlv~-F~a~wC~~C~~~~~~~~~~~~l~~~~----~~~~~~~vd~~~--------------~~~~~~~l~~~~~v~~ 91 (134)
T 2fwh_A 31 GKPVMLD-LYADWCVACKEFEKYTFSDPQVQKAL----ADTVLLQANVTA--------------NDAQDVALLKHLNVLG 91 (134)
T ss_dssp TSCEEEE-EECTTCHHHHHHHHHTTTSHHHHHHT----TTSEEEEEECTT--------------CCHHHHHHHHHTTCCS
T ss_pred CCcEEEE-EECCCCHHHHHHHHHhcCCHHHHHHh----cCcEEEEEeCCC--------------CcchHHHHHHHcCCCC
Confidence 5667776 5578999998887777 7777654 357777766642 1256677889999987
Q ss_pred CCcceEEE---cCeEe----ccCC-ChhhHHHHHHcCC
Q 023845 118 MFTPQLVF---QGRVQ----CQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 118 vYTPq~vV---nG~~~----~~g~-~~~~~~~~i~~~~ 147 (276)
+|++++ ||+.. ..|. +.+.+.+.|++..
T Consensus 92 --~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 92 --LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp --SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred --CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 899654 67764 3443 5777888887654
No 133
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=96.57 E-value=0.0071 Score=47.35 Aligned_cols=97 Identities=7% Similarity=0.043 Sum_probs=56.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc--------c--CCCCCCCCCCccccHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW--------D--YMGWKDPYGSSQWTVRQKAYV 110 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW--------D--ylGWkD~fa~~~~t~Rq~~Y~ 110 (276)
.+++|| .|.+..|+.|...-..|.++.+++. ..++..+++++|.= . .+.|...+... .......+
T Consensus 32 gk~vll-~F~a~wC~~C~~~~~~l~~l~~~~~--~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~ 106 (143)
T 4fo5_A 32 GRYTLL-NFWAAYDAESRARNVQLANEVNKFG--PDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEG--LGKESELY 106 (143)
T ss_dssp CCEEEE-EEECTTCHHHHHHHHHHHHHHTTSC--TTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECT--TGGGSHHH
T ss_pred CCEEEE-EEEcCcCHHHHHHHHHHHHHHHHhC--cCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecc--cccchHHH
Confidence 355655 5557799999999999999998764 34688888887720 0 01110001111 11112345
Q ss_pred HHhCCCCCCcce-EEEc--CeEeccCCChhhHHHHHH
Q 023845 111 EALNLDTMFTPQ-LVFQ--GRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 111 ~~~g~~~vYTPq-~vVn--G~~~~~g~~~~~~~~~i~ 144 (276)
+.+++.. +|. ++|| |+........+++...|+
T Consensus 107 ~~~~v~~--~P~~~lid~~G~i~~~~~~~~~l~~~l~ 141 (143)
T 4fo5_A 107 KKYDLRK--GFKNFLINDEGVIIAANVTPEKLTEILK 141 (143)
T ss_dssp HHTTGGG--CCCEEEECTTSBEEEESCCHHHHHHHHT
T ss_pred HHcCCCC--CCcEEEECCCCEEEEccCCHHHHHHHHH
Confidence 6666665 774 6665 655555445566665554
No 134
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.53 E-value=0.0039 Score=48.36 Aligned_cols=88 Identities=17% Similarity=0.254 Sum_probs=56.6
Q ss_pred CCceEEEEecCC-------CCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh
Q 023845 41 GGAVLVELFSSQ-------GCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL 113 (276)
Q Consensus 41 ~~~vvVElFTSq-------GCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~ 113 (276)
++++|| .|++. +|+.|-.....|.++.+++ .+++..+...++- .-.|+|. ...+++++
T Consensus 24 ~~~v~v-~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~---~~~~~~~~vd~~~--~~~~~d~---------~~~~~~~~ 88 (123)
T 1wou_A 24 GKTIFA-YFTGSKDAGGKSWCPDCVQAEPVVREGLKHI---SEGCVFIYCQVGE--KPYWKDP---------NNDFRKNL 88 (123)
T ss_dssp TSEEEE-EEECCBCTTCCBSCHHHHHHHHHHHHHGGGC---CTTEEEEEEECCC--HHHHHCT---------TCHHHHHH
T ss_pred CCEEEE-EEEccCCCCCCCcCHHHHHhhHHHHHHHHHc---CCCcEEEEEECCC--chhhhch---------hHHHHHHC
Confidence 455555 56666 9999999999999999876 3478888887751 1123332 23466678
Q ss_pred CCCCCCcceEEEcCe--Eec--cCCChhhHHHHHHc
Q 023845 114 NLDTMFTPQLVFQGR--VQC--QGNDQDGMLSAIAN 145 (276)
Q Consensus 114 g~~~vYTPq~vVnG~--~~~--~g~~~~~~~~~i~~ 145 (276)
++.. +|++++=.. ... .+.+.+.+...|.+
T Consensus 89 ~i~~--~Pt~~~~~~~~~~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 89 KVTA--VPTLLKYGTPQKLVESECLQANLVEMLFSE 122 (123)
T ss_dssp CCCS--SSEEEETTSSCEEEGGGGGCHHHHHHHHHC
T ss_pred CCCe--eCEEEEEcCCceEeccccCCHHHHHHHHhc
Confidence 9888 899776322 211 23345566666543
No 135
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=96.52 E-value=0.0034 Score=48.75 Aligned_cols=63 Identities=22% Similarity=0.192 Sum_probs=41.7
Q ss_pred EEEecCC-----CCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 46 VELFSSQ-----GCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 46 VElFTSq-----GCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
|.+|+.. +||.|-.|.++|.++.-.+ . .++|+ .. .+.+..+.+..|.++ +
T Consensus 20 Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~-----~----~~dI~-----------~~---~~~~~~l~~~~g~~t--v 74 (109)
T 3ipz_A 20 VVLFMKGTRDFPMCGFSNTVVQILKNLNVPF-----E----DVNIL-----------EN---EMLRQGLKEYSNWPT--F 74 (109)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHTTCCC-----E----EEEGG-----------GC---HHHHHHHHHHHTCSS--S
T ss_pred EEEEEecCCCCCCChhHHHHHHHHHHcCCCc-----E----EEECC-----------CC---HHHHHHHHHHHCCCC--C
Confidence 4578875 9999999999999875432 1 13333 11 234455555567666 9
Q ss_pred ceEEEcCeEeccCC
Q 023845 121 PQLVFQGRVQCQGN 134 (276)
Q Consensus 121 Pq~vVnG~~~~~g~ 134 (276)
|+++|||+ +++|.
T Consensus 75 P~ifi~g~-~iGG~ 87 (109)
T 3ipz_A 75 PQLYIGGE-FFGGC 87 (109)
T ss_dssp CEEEETTE-EEECH
T ss_pred CeEEECCE-EEeCH
Confidence 99999996 45554
No 136
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.52 E-value=0.011 Score=49.05 Aligned_cols=87 Identities=10% Similarity=0.043 Sum_probs=63.2
Q ss_pred cCCceEEEEecCCC--CCCCHHHHHHHHHhcccCCCCCCC-EEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQG--CKTSPEAEILVSRLGRGDFELGVP-VIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqG--CssCP~Ad~~l~~l~~~~~~~~~~-VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
...+||| +|.... |+.|-.-...|.+|++++ .++ |...-..| +.....+.+||++
T Consensus 33 ~~~~vlV-dF~a~~crCgpCk~iaPvleela~e~---~g~~v~~~KVdv------------------De~~~lA~~ygV~ 90 (140)
T 2qgv_A 33 QAPDGVV-LLSSDPKRTPEVSDNPVMIGELLHEF---PDYTWQVAIADL------------------EQSEAIGDRFGAF 90 (140)
T ss_dssp TCSSEEE-EECCCTTTCTTTTHHHHHHHHHHTTC---TTSCCEEEECCH------------------HHHHHHHHHHTCC
T ss_pred CCCCEEE-EEeCCcccCCcHHHHHhHHHHHHHHc---CCCeEEEEEEEC------------------CCCHHHHHHcCCc
Confidence 4557888 888887 999999999999999987 345 66655544 4567789999999
Q ss_pred CCCcceEEEcCeEec--cCC-ChhhHHHHHHcCCC
Q 023845 117 TMFTPQLVFQGRVQC--QGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 117 ~vYTPq~vVnG~~~~--~g~-~~~~~~~~i~~~~~ 148 (276)
++-|=-++-||+... +|. +.+.+.+.|++.+.
T Consensus 91 sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 91 RFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp SSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 944444666887643 453 46677777776553
No 137
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.50 E-value=0.00038 Score=53.51 Aligned_cols=84 Identities=19% Similarity=0.303 Sum_probs=58.3
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|+.|-.....|.++.+++ ++|..+.+++|- .....+++++.. +
T Consensus 36 ~~~~vv-~f~~~~C~~C~~~~~~l~~~~~~~----~~v~~~~v~~~~------------------~~~~~~~~~v~~--~ 90 (130)
T 1wmj_A 36 GKVVII-DFTASWCGPCRFIAPVFAEYAKKF----PGAVFLKVDVDE------------------LKEVAEKYNVEA--M 90 (130)
T ss_dssp TCBCBE-ECCSSSCSCSSSSHHHHHHHHHHC----TTBCCEECCTTT------------------SGGGHHHHTCCS--S
T ss_pred CCEEEE-EEECCCChhHHHHHHHHHHHHHHC----CCCEEEEEeccc------------------hHHHHHHcCCCc--c
Confidence 455555 566899999999999999998864 255555555431 123466788877 9
Q ss_pred ceEEE--cCeEe--ccCCChhhHHHHHHcCCCC
Q 023845 121 PQLVF--QGRVQ--CQGNDQDGMLSAIANAPKF 149 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~~~~~~~~~i~~~~~~ 149 (276)
|++++ ||+.. ..|.+.+.+...|.+....
T Consensus 91 Pt~~~~~~g~~~~~~~g~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 91 PTFLFIKDGAEADKVVGARKDDLQNTIVKHVGA 123 (130)
T ss_dssp CCCCBCTTTTCCBCCCTTCTTTHHHHHHHHTSS
T ss_pred ceEEEEeCCeEEEEEeCCCHHHHHHHHHHHHhc
Confidence 99988 78653 3455677888888876543
No 138
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.50 E-value=0.0021 Score=49.47 Aligned_cols=88 Identities=15% Similarity=0.180 Sum_probs=57.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.++++||+ |.+.+|+.|-.....| .++.+.. ..+++.+.+.++- +......+.+++.
T Consensus 26 ~~k~vlv~-f~a~wC~~C~~~~~~~~~~~~~~~~~---~~~~~~~~vd~~~----------------~~~~~~~~~~~v~ 85 (130)
T 2kuc_A 26 EDKLLFVD-CFTTWCGPCKRLSKVVFKDSLVADYF---NRHFVNLKMDMEK----------------GEGVELRKKYGVH 85 (130)
T ss_dssp HSSCEEEE-ECCTTCTHHHHHHHHGGGCHHHHHHH---HHHSEEEEECSSS----------------TTHHHHHHHTTCC
T ss_pred cCCeEEEE-EECCCCccHHHHHHHhcCcHHHHHHH---hcCeEEEEEecCC----------------cchHHHHHHcCCC
Confidence 34566666 5589999999888877 5555432 2356666655541 2345678889988
Q ss_pred CCCcceEEE---cCeEec--cCC-ChhhHHHHHHcCCCC
Q 023845 117 TMFTPQLVF---QGRVQC--QGN-DQDGMLSAIANAPKF 149 (276)
Q Consensus 117 ~vYTPq~vV---nG~~~~--~g~-~~~~~~~~i~~~~~~ 149 (276)
. +|++++ ||+... .|. +.+.+...|++....
T Consensus 86 ~--~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 86 A--YPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp S--SCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred C--CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 7 999776 787543 343 567788888776543
No 139
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.47 E-value=0.0024 Score=49.34 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=52.4
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
++|| .|.+.+|++|-.....|.++++++ + -+.++ .|.. .+.+...++.+++++ +|+
T Consensus 14 ~~vV-~F~A~WC~~C~~~~p~~~~~a~~~-----~----~v~~~-------~~~~-----~~~~~~l~~~~~V~~--~PT 69 (106)
T 3kp8_A 14 IGGT-MYGAYWCPHCQDQKELFGAAFDQV-----P----YVECS-------PNGP-----GTPQAQECTEAGITS--YPT 69 (106)
T ss_dssp HTCE-EEECTTCHHHHHHHHHHGGGGGGS-----C----EEESC-------TTCT-----TSCCCHHHHHTTCCS--SSE
T ss_pred CEEE-EEECCCCHHHHHHHHHHHHHHHhC-----C----EEEEe-------cccc-----cchhHHHHHHcCCeE--eCE
Confidence 4455 477899999999999999998754 1 12222 0111 012345677899998 999
Q ss_pred EEEcCeEeccCCChhhHHHHHH
Q 023845 123 LVFQGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 123 ~vVnG~~~~~g~~~~~~~~~i~ 144 (276)
++|||+...+..+.+.+...+.
T Consensus 70 ~~i~G~~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 70 WIINGRTYTGVRSLEALAVASG 91 (106)
T ss_dssp EEETTEEEESCCCHHHHHHHHT
T ss_pred EEECCEEecCCCCHHHHHHHhC
Confidence 9999987555555666666554
No 140
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=96.47 E-value=0.0036 Score=50.02 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=51.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCC--CccccHHHHHHHHHhCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYG--SSQWTVRQKAYVEALNLDT 117 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa--~~~~t~Rq~~Y~~~~g~~~ 117 (276)
..+++||..| +.+|+.|......|.++.+++. ..++..+++.+|- +..-|.+.+. -+...+......+.+++..
T Consensus 40 ~gk~vll~F~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~v~~d~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 115 (158)
T 3hdc_A 40 RGKIVLVNFW-ASWCPYCRDEMPSMDRLVKSFP--KGDLVVLAVNVEK-RFPEKYRRAPVSFNFLSDATGQVQQRYGANR 115 (158)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHSS--TTSEEEEEEECSS-SCCGGGGGCCCSCEEEECTTSHHHHHTTCCS
T ss_pred CCCEEEEEEE-CCcCHHHHHHHHHHHHHHHHcc--cCCeEEEEEeCCH-HHHHHHHHcCCCceEEECchHHHHHHhCCCC
Confidence 3456677655 8999999999999999998764 3578888888764 1111111111 1122233345677888876
Q ss_pred CCcce-EEEc
Q 023845 118 MFTPQ-LVFQ 126 (276)
Q Consensus 118 vYTPq-~vVn 126 (276)
+|. ++||
T Consensus 116 --~P~~~lid 123 (158)
T 3hdc_A 116 --LPDTFIVD 123 (158)
T ss_dssp --SSEEEEEC
T ss_pred --cceEEEEc
Confidence 898 7774
No 141
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.46 E-value=0.0022 Score=49.47 Aligned_cols=45 Identities=7% Similarity=0.126 Sum_probs=35.8
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
.++++||..| +.+|++|......|.++.+++. ..+|..+.+++|.
T Consensus 33 ~gk~~ll~f~-~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~v~~d~ 77 (145)
T 3erw_A 33 KGQKTILHFW-TSWCPPCKKELPQFQSFYDAHP--SDSVKLVTVNLVN 77 (145)
T ss_dssp TTSEEEEEEE-CSSCHHHHHHHHHHHHHHHHCC--CSSEEEEEEECGG
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHcC--CCCEEEEEEEccC
Confidence 4566777655 9999999999999999998763 3578888888873
No 142
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.0045 Score=49.31 Aligned_cols=66 Identities=24% Similarity=0.209 Sum_probs=42.3
Q ss_pred EEEecCC-----CCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 46 VELFSSQ-----GCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 46 VElFTSq-----GCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
|-+|+.. +|+.|-.|.++|.++.-.+ ..+. .+.|+ .. .+.+..+.+..|.++ +
T Consensus 18 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~----~~~~--~~dv~-----------~~---~~~~~~l~~~sg~~t--v 75 (121)
T 3gx8_A 18 VVLFMKGTPEFPKCGFSRATIGLLGNQGVDP----AKFA--AYNVL-----------ED---PELREGIKEFSEWPT--I 75 (121)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHTBCG----GGEE--EEECT-----------TC---HHHHHHHHHHHTCCS--S
T ss_pred EEEEEeccCCCCCCccHHHHHHHHHHcCCCc----ceEE--EEEec-----------CC---HHHHHHHHHHhCCCC--C
Confidence 4578775 9999999999999975421 1111 12221 11 345555666667766 9
Q ss_pred ceEEEcCeEeccCC
Q 023845 121 PQLVFQGRVQCQGN 134 (276)
Q Consensus 121 Pq~vVnG~~~~~g~ 134 (276)
||++|||+ +++|.
T Consensus 76 P~vfI~g~-~iGG~ 88 (121)
T 3gx8_A 76 PQLYVNKE-FIGGC 88 (121)
T ss_dssp CEEEETTE-EEESH
T ss_pred CeEEECCE-EEecH
Confidence 99999996 45554
No 143
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=96.44 E-value=0.0044 Score=51.38 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCCCCcceEEEcCeEeccCCChhhHHHHHHcCC
Q 023845 105 RQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 105 Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i~~~~ 147 (276)
+...+++.+|+.+ ||+++|||+...+..+.+.+..+|.+..
T Consensus 137 ~~~~~a~~~gv~G--tPt~vvnG~~~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 137 KDKKIAKDNHIKT--TPTAFINGEKVEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHHHTTCCS--SSEEEETTEECSCTTCHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCC--CCeEEECCEEcCCCCCHHHHHHHHHHHH
Confidence 3455678888888 9999999986543356888998888765
No 144
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=96.43 E-value=0.0072 Score=47.42 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=54.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee--------cccCCCCCCCCCCccccHHHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD--------YWDYMGWKDPYGSSQWTVRQKAYVEA 112 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd--------YWDylGWkD~fa~~~~t~Rq~~Y~~~ 112 (276)
++++||. |.+.+|+.|......|.++.++ ++|..+.+++| |....|+. |.. ...+.....++.
T Consensus 42 gk~~ll~-f~~~~C~~C~~~~~~l~~l~~~-----~~v~~v~v~~~~~~~~~~~~~~~~~~~--~~~-~~~d~~~~~~~~ 112 (156)
T 1kng_A 42 GKVSLVN-VWASWCVPCHDEAPLLTELGKD-----KRFQLVGINYKDAADNARRFLGRYGNP--FGR-VGVDANGRASIE 112 (156)
T ss_dssp TSCEEEE-EECTTCHHHHHHHHHHHHHTTC-----TTSEEEEEEESCCHHHHHHHHHHHCCC--CSE-EEEETTSHHHHH
T ss_pred CCEEEEE-EEcccCHhHHHHHHHHHHHHhc-----CCeEEEEEECCCCHHHHHHHHHHcCCC--Cce-eeeCchhHHHHh
Confidence 5667775 5579999999999999999874 35666666654 11111111 000 111223345667
Q ss_pred hCCCCCCcc-eEEE--cCeEec--cCC-ChhhHHHHHHc
Q 023845 113 LNLDTMFTP-QLVF--QGRVQC--QGN-DQDGMLSAIAN 145 (276)
Q Consensus 113 ~g~~~vYTP-q~vV--nG~~~~--~g~-~~~~~~~~i~~ 145 (276)
+++.. +| .++| ||+... .|. +.+.+...|++
T Consensus 113 ~~v~~--~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 113 WGVYG--VPETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp TTCCS--SCEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred cCcCc--cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 78776 99 5788 565432 333 45556555554
No 145
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.32 E-value=0.011 Score=44.95 Aligned_cols=83 Identities=8% Similarity=0.139 Sum_probs=52.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++| =.|.+.+|++|-.....|.++.+++ ...|+.+ .++ .....+....+++++++.. +
T Consensus 29 ~~~~~-v~f~a~wC~~C~~~~p~l~~~~~~~---~~~v~~~--~~~------------~~~~~~~~~~~~~~~~i~~--~ 88 (118)
T 1zma_A 29 KETAT-FFIGRKTCPYCRKFAGTLSGVVAET---KAHIYFI--NSE------------EPSQLNDLQAFRSRYGIPT--V 88 (118)
T ss_dssp TCCEE-EEEECTTCHHHHHHHHHHHHHHHHH---CCCCEEE--ETT------------CGGGHHHHHHHHHHHTCCS--S
T ss_pred CCeEE-EEEECCCCccHHHHHHHHHHHHHhc---CCeEEEE--ECC------------CcCcHHHHHHHHHHcCCCC--C
Confidence 34444 4677899999999999999998754 2233332 221 1112344567888999988 8
Q ss_pred ceEEE--cCeEec--cCC-ChhhHHHHH
Q 023845 121 PQLVF--QGRVQC--QGN-DQDGMLSAI 143 (276)
Q Consensus 121 Pq~vV--nG~~~~--~g~-~~~~~~~~i 143 (276)
|++++ ||+... .|. +.+.+...|
T Consensus 89 Pt~~~~~~G~~~~~~~G~~~~~~l~~~l 116 (118)
T 1zma_A 89 PGFVHITDGQINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp CEEEEEETTEEEEECCTTCCHHHHHHHH
T ss_pred CeEEEEECCEEEEEecCCCCHHHHHHHh
Confidence 99765 786532 333 345555544
No 146
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=96.30 E-value=0.0048 Score=49.90 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=61.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.++++||.+|.+.+|+.|-.....| .++.+.. ..+++.+.+.++...- +.. ...+......+.+++.
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~---~~~~~~v~vd~~~~~~------~~~-~~~~~~~~l~~~~~v~ 115 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA---GVHLHMVEVDFPQKNH------QPE-EQRQKNQELKAQYKVT 115 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH---HHHCEEEEEECCSSCC------CCH-HHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh---cCcEEEEEecCccccC------CCh-hhHhhHHHHHHHcCCC
Confidence 3567777666589999998888877 6665432 2478888887764321 111 1235566788899998
Q ss_pred CCCcceEEE---cCeEecc-CC---ChhhHHHHHHcC
Q 023845 117 TMFTPQLVF---QGRVQCQ-GN---DQDGMLSAIANA 146 (276)
Q Consensus 117 ~vYTPq~vV---nG~~~~~-g~---~~~~~~~~i~~~ 146 (276)
. +|+++| ||+.... |. +.+.+...|++.
T Consensus 116 ~--~Pt~~~~d~~G~~~~~~G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 116 G--FPELVFIDAEGKQLARMGFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp S--SSEEEEECTTCCEEEEECCCTTCHHHHHHHHHHH
T ss_pred C--CCEEEEEcCCCCEEEEecCCCCCHHHHHHHHHHH
Confidence 8 999665 6765442 33 355666666543
No 147
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=96.27 E-value=0.0079 Score=48.11 Aligned_cols=43 Identities=14% Similarity=0.134 Sum_probs=33.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
++++||..|. .+|+.|...-..|.++.+++. ..++..+++.+|
T Consensus 35 gk~vll~F~a-~wC~~C~~~~~~l~~l~~~~~--~~~~~vv~i~~d 77 (152)
T 2lrt_A 35 GKVVLIDFTV-YNNAMSAAHNLALRELYNKYA--SQGFEIYQISLD 77 (152)
T ss_dssp GSEEEEEEEC-TTCHHHHHHHHHHHHHHHHHG--GGTEEEEEEECS
T ss_pred CCEEEEEEEc-CCChhhHHHHHHHHHHHHHhc--cCCeEEEEEEcc
Confidence 4677777775 599999999999999887653 235888888776
No 148
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=96.27 E-value=0.0046 Score=48.40 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=32.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHH---hcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSR---LGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~---l~~~~~~~~~~VIaLa~hVd 86 (276)
.+++||. |.+.+|++|......|.+ |.+++. ..++..+++.+|
T Consensus 31 gk~vll~-F~a~wC~~C~~~~~~l~~~~~l~~~~~--~~~~~vi~i~~d 76 (142)
T 3eur_A 31 AEYTLLF-INNPGCHACAEMIEGLKASPVINGFTA--AKKLKVLSIYPD 76 (142)
T ss_dssp CSEEEEE-ECCSSSHHHHHHHHHHHHCHHHHHHHH--TTSEEEEEEECS
T ss_pred CCEEEEE-EECCCCccHHHHHHHHhhhHHHHHHhc--cCCeEEEEEEcC
Confidence 4567776 559999999998888888 776543 357888888776
No 149
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.0076 Score=46.24 Aligned_cols=86 Identities=13% Similarity=0.114 Sum_probs=57.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCC-CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFE-LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~-~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
++++|| .|++.+|++|-.....|.++++++.. ..++|..+.++++- .....+++++..
T Consensus 25 ~~~~lv-~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~------------------~~~l~~~~~v~~-- 83 (133)
T 1x5d_A 25 EDVWMV-EFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV------------------NQVLASRYGIRG-- 83 (133)
T ss_dssp SSEEEE-EEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT------------------CCHHHHHHTCCS--
T ss_pred CCeEEE-EEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC------------------CHHHHHhCCCCe--
Confidence 445555 57788999999999999888875410 01467777666551 134567788887
Q ss_pred cceEEE--cCeEe--ccCC-ChhhHHHHHHcCC
Q 023845 120 TPQLVF--QGRVQ--CQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~-~~~~~~~~i~~~~ 147 (276)
+|++++ +|+.. ..|. +.+.+...|.+..
T Consensus 84 ~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 84 FPTIKIFQKGESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp SSEEEEEETTEEEEEECSCCSHHHHHHHHHHHH
T ss_pred eCeEEEEeCCCceEEecCCCCHHHHHHHHHHHh
Confidence 999776 67643 2343 5677777777654
No 150
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=96.26 E-value=0.0048 Score=48.60 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=61.5
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee----------cccCCCCCCCCCCccccHHHHHHHH
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD----------YWDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd----------YWDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
+++||..| +.+|+.|......|.++.+++ +|..+.+++| |....++.=++... ..+......+
T Consensus 31 k~vll~f~-~~~C~~C~~~~~~l~~l~~~~-----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~ 103 (154)
T 3ia1_A 31 KPAVIVFW-ASWCTVCKAEFPGLHRVAEET-----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLAS-DRDRPHEVAA 103 (154)
T ss_dssp SSEEEEEE-CTTCHHHHHHHHHHHHHHHHH-----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCC-SSCCHHHHHT
T ss_pred CeEEEEEE-cccChhHHHHHHHHHHHHHHc-----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccc-cccchHHHHH
Confidence 56777655 889999999999999998865 4555666663 11111211011000 0013455677
Q ss_pred HhCCCCCCcce-EEE--cCeEec--cC-CChhhHHHHHHcCCCC
Q 023845 112 ALNLDTMFTPQ-LVF--QGRVQC--QG-NDQDGMLSAIANAPKF 149 (276)
Q Consensus 112 ~~g~~~vYTPq-~vV--nG~~~~--~g-~~~~~~~~~i~~~~~~ 149 (276)
.+++.. +|. ++| ||+... .| .+.+.+.+.|++....
T Consensus 104 ~~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 104 RFKVLG--QPWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp TSSBCS--SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred HhCCCc--ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 788776 999 777 465332 33 3678899999887654
No 151
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.25 E-value=0.016 Score=45.57 Aligned_cols=89 Identities=12% Similarity=0.088 Sum_probs=59.0
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
.+|=.|++.+|++|-.....|.++++++ ++..+.+.++- . ......+.....++++++.. +|++
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~-----~v~~~~vd~~~--~-------~~~~~~d~~~~l~~~~~v~~--~Pt~ 96 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEV-----DVPIVMFIWGS--L-------IGERELSAARLEMNKAGVEG--TPTL 96 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTC-----CSCEEEEEECT--T-------CCHHHHHHHHHHHHHHTCCS--SSEE
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHC-----CCEEEEEECCC--c-------hhhhhhhhhHHHHHHcCCce--eCeE
Confidence 4444567889999999999999999875 24445554431 1 11234466778899999988 8887
Q ss_pred EE--cCeEe--ccCC-ChhhHHHHHHcCCC
Q 023845 124 VF--QGRVQ--CQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 124 vV--nG~~~--~~g~-~~~~~~~~i~~~~~ 148 (276)
++ ||+.. ..|. +.+.+...|++...
T Consensus 97 ~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~ 126 (135)
T 3emx_A 97 VFYKEGRIVDKLVGATPWSLKVEKAREIYG 126 (135)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHC-
T ss_pred EEEcCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 76 56543 2444 46666666666554
No 152
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=96.25 E-value=0.0094 Score=46.44 Aligned_cols=82 Identities=16% Similarity=0.254 Sum_probs=53.5
Q ss_pred CCceEEEEecCCCCC--------------CCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHH
Q 023845 41 GGAVLVELFSSQGCK--------------TSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQ 106 (276)
Q Consensus 41 ~~~vvVElFTSqGCs--------------sCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq 106 (276)
++++|| .|++.+|+ +|-.....+.++++++ .+++..+.+.+|- .
T Consensus 21 ~k~vlv-~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~---~~~~~~~~vd~d~-----------~------- 78 (123)
T 1oaz_A 21 DGAILV-DFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEY---QGKLTVAKLNIDQ-----------N------- 78 (123)
T ss_dssp SSEEEE-EEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC----------CEEEEEETTS-----------C-------
T ss_pred CCeEEE-EEECCCCccccccccccccCCCCcHHHHHHHHHHHHHh---cCCeEEEEEECCC-----------C-------
Confidence 455555 56788999 9999999999998865 3467777776652 1
Q ss_pred HHHHHHhCCCCCCcceEEE--cCeEe--ccCC-ChhhHHHHHHcC
Q 023845 107 KAYVEALNLDTMFTPQLVF--QGRVQ--CQGN-DQDGMLSAIANA 146 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vV--nG~~~--~~g~-~~~~~~~~i~~~ 146 (276)
...++++++.. +|++++ ||+.. ..|. +.+.+.+.|++.
T Consensus 79 ~~l~~~~~v~~--~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 79 PGTAPKYGIRG--IPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TTTGGGGTCCB--SSEEEEEESSSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHHHHHcCCCc--cCEEEEEECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 12345678877 999888 88864 3444 567787777654
No 153
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=96.21 E-value=0.0036 Score=59.53 Aligned_cols=70 Identities=24% Similarity=0.221 Sum_probs=44.8
Q ss_pred EEEEecCCCCCCCHHHHH-HHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 45 LVELFSSQGCKTSPEAEI-LVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~-~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
-|.+||..+|+.|..|.+ +|.++.-.+ ..+-++.+ | . . ..-.+.|....+..|.++ +||+
T Consensus 262 ~VvVYsk~~CPyC~~Ak~~LL~~~gV~y----~eidVlEl--d---~------~--~~~~e~~~~L~~~tG~~T--VPqV 322 (362)
T 2jad_A 262 EIFVASKTYCPYSHAALNTLFEKLKVPR----SKVLVLQL--N---D------M--KEGADIQAALYEINGQRT--VPNI 322 (362)
T ss_dssp SEEEEECTTCHHHHHHHHHHHTTTCCCT----TTEEEEEG--G---G------S--TTHHHHHHHHHHHHCCCS--SCEE
T ss_pred CEEEEEcCCCcchHHHHHHHHHHcCCCc----ceEEEEEe--c---c------c--cCCHHHHHHHHHHHCCCC--cCEE
Confidence 378899999999999987 788876432 23222211 1 0 0 112345555556678776 9999
Q ss_pred EEcCeEeccCC
Q 023845 124 VFQGRVQCQGN 134 (276)
Q Consensus 124 vVnG~~~~~g~ 134 (276)
+|||+ .++|.
T Consensus 323 FI~Gk-~IGG~ 332 (362)
T 2jad_A 323 YINGK-HIGGN 332 (362)
T ss_dssp EETTE-EEESH
T ss_pred EECCE-EEECh
Confidence 99997 45554
No 154
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.19 E-value=0.0096 Score=45.86 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=56.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++.. .++|..+.++++-.+. ..+++++.. +
T Consensus 25 ~~~vlv-~f~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~~~~vd~~~~~~------------------~~~~~~v~~--~ 82 (133)
T 2dj3_A 25 KKDVLI-EFYAPWCGHCKQLEPIYTSLGKKYKG-QKDLVIAKMDATANDI------------------TNDQYKVEG--F 82 (133)
T ss_dssp TSEEEE-EECCTTCSHHHHHHHHHHHHHHHHTT-SSSEEEEEECTTTSCC------------------CCSSCCCSS--S
T ss_pred CCcEEE-EEECCCChhHHHHHHHHHHHHHHhcC-CCCEEEEEecCCcCHH------------------HHhhcCCCc--C
Confidence 345555 56788999999999999999876521 2468777776653211 122467776 9
Q ss_pred ceEEE--cCeE----ecc-C-CChhhHHHHHHcCCCC
Q 023845 121 PQLVF--QGRV----QCQ-G-NDQDGMLSAIANAPKF 149 (276)
Q Consensus 121 Pq~vV--nG~~----~~~-g-~~~~~~~~~i~~~~~~ 149 (276)
|++++ +|.. ... | .+.+.+...|.+....
T Consensus 83 Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 83 PTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp SEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred CEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 99776 3421 223 4 4677888888876543
No 155
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=96.17 E-value=0.003 Score=52.18 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=30.9
Q ss_pred CceEEEEecCCCCCCCHHHHHHH-HHhcccCCCCCCCEEEEEEeeec
Q 023845 42 GAVLVELFSSQGCKTSPEAEILV-SRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l-~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
++++|| |.+-.||+|=.+...| .+|.+++ ..+|...-+|+.+
T Consensus 18 ~~~~ie-f~d~~CP~C~~~~~~l~~~l~~~~---~~~v~~~~~~l~~ 60 (195)
T 3c7m_A 18 DKTLIK-VFSYACPFCYKYDKAVTGPVSEKV---KDIVAFTPFHLET 60 (195)
T ss_dssp TTEEEE-EECTTCHHHHHHHHHTHHHHHHHT---TTTCEEEEEECTT
T ss_pred CcEEEE-EEeCcCcchhhCcHHHHHHHHHhC---CCceEEEEEecCc
Confidence 457888 5579999999999999 8888765 2355555566543
No 156
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=96.08 E-value=0.0054 Score=48.88 Aligned_cols=63 Identities=22% Similarity=0.248 Sum_probs=40.6
Q ss_pred EEEecCC-----CCCCCHHHHHHHHHhccc-CCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 46 VELFSSQ-----GCKTSPEAEILVSRLGRG-DFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 46 VElFTSq-----GCssCP~Ad~~l~~l~~~-~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
|.+|+.. +|+.|-.|.++|.++.-. + . .+.|+ .+ .+.+..+.+..|.++
T Consensus 22 Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~-----~----~vdV~-----------~d---~~~~~~l~~~tg~~t-- 76 (118)
T 2wem_A 22 VVVFLKGTPEQPQCGFSNAVVQILRLHGVRDY-----A----AYNVL-----------DD---PELRQGIKDYSNWPT-- 76 (118)
T ss_dssp EEEEESBCSSSBSSHHHHHHHHHHHHTTCCCC-----E----EEESS-----------SC---HHHHHHHHHHHTCCS--
T ss_pred EEEEEecCCCCCccHHHHHHHHHHHHcCCCCC-----E----EEEcC-----------CC---HHHHHHHHHHhCCCC--
Confidence 4568885 999999999999987542 2 1 13333 11 233344445556665
Q ss_pred cceEEEcCeEeccCC
Q 023845 120 TPQLVFQGRVQCQGN 134 (276)
Q Consensus 120 TPq~vVnG~~~~~g~ 134 (276)
+||++|||+ +++|.
T Consensus 77 vP~vfI~g~-~IGG~ 90 (118)
T 2wem_A 77 IPQVYLNGE-FVGGC 90 (118)
T ss_dssp SCEEEETTE-EEESH
T ss_pred cCeEEECCE-EEeCh
Confidence 999999996 44554
No 157
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=95.99 E-value=0.0076 Score=45.74 Aligned_cols=83 Identities=12% Similarity=0.013 Sum_probs=57.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|++.+|++|-.....|.++++++ .++|..+.++++- .....+++++.. +
T Consensus 21 ~~~~lv-~f~a~~C~~C~~~~~~~~~~~~~~---~~~~~~~~vd~~~------------------~~~~~~~~~v~~--~ 76 (122)
T 3aps_A 21 KTHWVV-DFYAPWCGPCQNFAPEFELLARMI---KGKVRAGKVDCQA------------------YPQTCQKAGIKA--Y 76 (122)
T ss_dssp SSCEEE-EEECTTCHHHHHHHHHHHHHHHHH---TTTCEEEEEETTT------------------CHHHHHHTTCCS--S
T ss_pred CCeEEE-EEECCCCHHHHHHHHHHHHHHHHh---cCCeEEEEEeCcC------------------CHHHHHHcCCCc--c
Confidence 455666 577889999999999999998875 3467777777652 134677899887 9
Q ss_pred ceEEE--cCeEe--ccC-----CChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQ--CQG-----NDQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g-----~~~~~~~~~i~~~~ 147 (276)
|++++ +|... ..| .+.+.+.+.|.+.+
T Consensus 77 Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 77 PSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp SEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred ceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHH
Confidence 99776 33221 223 36777777777654
No 158
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=95.96 E-value=0.0034 Score=51.60 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=59.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc---------------cCCCCCCCCCCccccHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW---------------DYMGWKDPYGSSQWTVR 105 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW---------------DylGWkD~fa~~~~t~R 105 (276)
.+++||..| +.+|+.|...-..|.+|.+++. +.|..+++++|.- ...|+. -+...+.
T Consensus 33 gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~---~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~----~~~~~d~ 104 (188)
T 2cvb_A 33 EPLLAVVFM-CNHCPYVKGSIGELVALAERYR---GKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIF----FPYLLDE 104 (188)
T ss_dssp SSEEEEEEE-CSSCHHHHTTHHHHHHHHHHTT---TTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCC----SCEEECS
T ss_pred CCEEEEEEE-CCCCccHHHHHHHHHHHHHHhh---cCeEEEEEEcCccccccccCHHHHHHHHHHhCCC----ceEEECC
Confidence 456777654 7799999988888999988763 2388888887521 111110 0111222
Q ss_pred HHHHHHHhCCCCCCcce-EEE--cCeEeccCC-----------ChhhHHHHHHcCCC
Q 023845 106 QKAYVEALNLDTMFTPQ-LVF--QGRVQCQGN-----------DQDGMLSAIANAPK 148 (276)
Q Consensus 106 q~~Y~~~~g~~~vYTPq-~vV--nG~~~~~g~-----------~~~~~~~~i~~~~~ 148 (276)
....++.+++.. +|. ++| +|+....|. +.+.+...|++.++
T Consensus 105 ~~~~~~~~~v~~--~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 105 TQEVAKAYRALR--TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp SSHHHHHTTCCE--ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cchHHHHcCCCC--CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 234566777665 897 556 466555443 45667777776554
No 159
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.94 E-value=0.036 Score=43.53 Aligned_cols=97 Identities=9% Similarity=0.158 Sum_probs=57.7
Q ss_pred CCceEEEEecCCCCCC--CHHHHHHHHHhcccC-CCCCCCEEEEEEeeeccc----------CCCCCCCCCCccccHHHH
Q 023845 41 GGAVLVELFSSQGCKT--SPEAEILVSRLGRGD-FELGVPVIVLAYHVDYWD----------YMGWKDPYGSSQWTVRQK 107 (276)
Q Consensus 41 ~~~vvVElFTSqGCss--CP~Ad~~l~~l~~~~-~~~~~~VIaLa~hVdYWD----------ylGWkD~fa~~~~t~Rq~ 107 (276)
.+++||. |.+..|+. |+..-..|.++.+++ . .++|..+++++|-=. .+.|.= +..+ .....
T Consensus 33 gk~vll~-F~a~~C~~v~C~~~~~~l~~l~~~~~~--~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~-~~d~--~~~~~ 106 (150)
T 3fw2_A 33 QKSLLIN-FWASWNDSISQKQSNSELREIYKKYKK--NKYIGMLGISLDVDKQQWKDAIKRDTLDWEQ-VCDF--GGLNS 106 (150)
T ss_dssp TSEEEEE-EECTTCCCHHHHHHHHHHHHHHHHHTT--CSSEEEEEEECCSCHHHHHHHHHHTTCCSEE-ECCS--CGGGC
T ss_pred CCEEEEE-EEeCCCCchHHHHHHHHHHHHHHHhcc--CCCeEEEEEEcCCCHHHHHHHHHHhCCCceE-EEcC--cccch
Confidence 4566665 55589999 999999999998765 3 456888888887200 001100 0000 00023
Q ss_pred HHHHHhCCCCCCcce-EEE--cCeEeccCCChhhHHHHHHc
Q 023845 108 AYVEALNLDTMFTPQ-LVF--QGRVQCQGNDQDGMLSAIAN 145 (276)
Q Consensus 108 ~Y~~~~g~~~vYTPq-~vV--nG~~~~~g~~~~~~~~~i~~ 145 (276)
...+.+|+.. +|. ++| ||+......+.+.+...|.+
T Consensus 107 ~~~~~~~v~~--~P~~~lid~~G~i~~~~~~~~~l~~~l~~ 145 (150)
T 3fw2_A 107 EVAKQYSIYK--IPANILLSSDGKILAKNLRGEELKKKIEN 145 (150)
T ss_dssp HHHHHTTCCS--SSEEEEECTTSBEEEESCCHHHHHHHHHH
T ss_pred HHHHHcCCCc--cCeEEEECCCCEEEEccCCHHHHHHHHHH
Confidence 4566777765 787 556 46665555566666666654
No 160
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=95.94 E-value=0.013 Score=49.69 Aligned_cols=30 Identities=27% Similarity=0.274 Sum_probs=24.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhccc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRG 70 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~ 70 (276)
+.+|.|++|++-.||+|-.+...+.++.++
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~ 42 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQ 42 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHH
Confidence 567999999999999999887777665554
No 161
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.94 E-value=0.016 Score=48.94 Aligned_cols=87 Identities=10% Similarity=0.172 Sum_probs=57.8
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++|| .|++.+|++|-.....|.+|++++....++|..+.++++ ....+.+++++..
T Consensus 31 ~~~~v~v-~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~------------------~~~~l~~~~~v~~-- 89 (241)
T 3idv_A 31 DKDTVLL-EFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT------------------SASVLASRFDVSG-- 89 (241)
T ss_dssp TCSEEEE-EEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT------------------TCHHHHHHTTCCS--
T ss_pred cCCeEEE-EEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc------------------CCHHHHHhcCCCc--
Confidence 3445555 566789999999999999988754322334776666554 2246788899988
Q ss_pred cceEEE--cCeEec--cCCChhhHHHHHHcCC
Q 023845 120 TPQLVF--QGRVQC--QGNDQDGMLSAIANAP 147 (276)
Q Consensus 120 TPq~vV--nG~~~~--~g~~~~~~~~~i~~~~ 147 (276)
+|++++ +|+... ++.+.+.+...|.+..
T Consensus 90 ~Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 90 YPTIKILKKGQAVDYEGSRTQEEIVAKVREVS 121 (241)
T ss_dssp SSEEEEEETTEEEECCSCSCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCcccccCcccHHHHHHHHhhcc
Confidence 888766 565432 3345677777777654
No 162
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=95.92 E-value=0.0094 Score=51.50 Aligned_cols=64 Identities=17% Similarity=0.250 Sum_probs=43.2
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
..-|.+|+..+|+.|..|.++|.++.-.+ . .++++ .++. + ....+..|.++ +|+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~~i~~-----~----~~~i~-----------~~~~---~-~~l~~~~g~~~--vP~ 222 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDKGLSF-----E----EIILG-----------HDAT---I-VSVRAVSGRTT--VPQ 222 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHTCCC-----E----EEETT-----------TTCC---H-HHHHHHTCCSS--SCE
T ss_pred cceEEEEECCCChHHHHHHHHHHHcCCce-----E----EEECC-----------CchH---H-HHHHHHhCCCC--cCE
Confidence 34589999999999999999999875432 1 12332 1121 2 34455567665 999
Q ss_pred EEEcCeEeccC
Q 023845 123 LVFQGRVQCQG 133 (276)
Q Consensus 123 ~vVnG~~~~~g 133 (276)
++|||+. +.|
T Consensus 223 ~~~~g~~-i~g 232 (241)
T 1nm3_A 223 VFIGGKH-IGG 232 (241)
T ss_dssp EEETTEE-EES
T ss_pred EEECCEE-EEC
Confidence 9999964 444
No 163
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.91 E-value=0.019 Score=46.87 Aligned_cols=43 Identities=23% Similarity=0.254 Sum_probs=33.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
++++||.. .+.+|+.|......|.++.+++. ..++..+++++|
T Consensus 60 gk~vll~F-~a~~C~~C~~~~~~l~~l~~~~~--~~~~~vv~v~~d 102 (186)
T 1jfu_A 60 GKTLLVNL-WATWCVPCRKEMPALDELQGKLS--GPNFEVVAINID 102 (186)
T ss_dssp TSEEEEEE-ECTTCHHHHHHHHHHHHHHHHHC--BTTEEEEEEECC
T ss_pred CCEEEEEE-EeCCCHhHHHHHHHHHHHHHHhc--cCCcEEEEEECC
Confidence 45666654 58899999999999999987653 257888888877
No 164
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=95.87 E-value=0.015 Score=47.29 Aligned_cols=79 Identities=10% Similarity=0.129 Sum_probs=49.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccc-cHHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQW-TVRQKAYVE 111 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~-t~Rq~~Y~~ 111 (276)
.+++||..| +..|+.|......|.+|.+++.+ ..++..+++.+|- ....+|. .-+.. .+.....++
T Consensus 48 gk~vll~F~-a~wC~~C~~~~p~l~~l~~~~~~-~~~v~vv~v~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 122 (165)
T 3s9f_A 48 GKTVFFYFS-ASWCPPCRGFTPQLVEFYEKHHD-SKNFEIILASWDEEEDDFNAYYAKMPWL---SIPFANRNIVEALTK 122 (165)
T ss_dssp TSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TTTEEEEEEECCCSHHHHHHHHTTCSSE---ECCTTCHHHHHHHHH
T ss_pred CCEEEEEEE-CCcChhHHHHHHHHHHHHHHhcc-CCCeEEEEEecCCCHHHHHHHHHhCCCc---ccccCchhHHHHHHH
Confidence 456666555 88999999999999999877631 1367777777662 1112221 11111 122266788
Q ss_pred HhCCCCCCcce-EEEc
Q 023845 112 ALNLDTMFTPQ-LVFQ 126 (276)
Q Consensus 112 ~~g~~~vYTPq-~vVn 126 (276)
.+++.. +|. ++||
T Consensus 123 ~~~v~~--~Pt~~lid 136 (165)
T 3s9f_A 123 KYSVES--IPTLIGLN 136 (165)
T ss_dssp HTTCCS--SSEEEEEE
T ss_pred HcCCCC--CCEEEEEe
Confidence 889876 898 4555
No 165
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.86 E-value=0.045 Score=46.73 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=31.1
Q ss_pred HHHHHHHHhCCCCCCcceEEEcCeEeccCCChhhHHHHHHcCC
Q 023845 105 RQKAYVEALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 105 Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i~~~~ 147 (276)
+...+++.+|+.+ ||.++|||+...+..+.+.+..+|.+.+
T Consensus 151 ~~~~~a~~~gV~g--tPtfvvnG~~~~G~~~~e~l~~~i~~~~ 191 (202)
T 3gha_A 151 KDSDLNQKMNIQA--TPTIYVNDKVIKNFADYDEIKETIEKEL 191 (202)
T ss_dssp HHHHHHHHTTCCS--SCEEEETTEECSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCc--CCEEEECCEEecCCCCHHHHHHHHHHHH
Confidence 3445677788888 9999999997554457888888887654
No 166
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.81 E-value=0.0088 Score=50.59 Aligned_cols=86 Identities=13% Similarity=0.215 Sum_probs=59.7
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
..++++|| .|++.+|++|-.....+.+++++. .++|..+.++++- .....+.+++..
T Consensus 112 ~~~~~vlv-~F~a~wC~~C~~~~p~~~~l~~~~---~~~v~~~~vd~~~------------------~~~l~~~~~v~~- 168 (210)
T 3apq_A 112 NSGELWFV-NFYSPGCSHCHDLAPTWREFAKEV---DGLLRIGAVNCGD------------------DRMLCRMKGVNS- 168 (210)
T ss_dssp HHSCCEEE-EEECTTCHHHHHHHHHHHHHHHHT---BTTBEEEEEETTT------------------CHHHHHHTTCCS-
T ss_pred ccCCcEEE-EEeCCCChhHHHHHHHHHHHHHHh---cCceEEEEEECCc------------------cHHHHHHcCCCc-
Confidence 34455555 466789999999999999998865 3457777766541 134677889887
Q ss_pred CcceEEE--cCeEe--ccC-CChhhHHHHHHcCCC
Q 023845 119 FTPQLVF--QGRVQ--CQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 119 YTPq~vV--nG~~~--~~g-~~~~~~~~~i~~~~~ 148 (276)
+|++++ +|+.. ..| .+.+.+...|.+.+.
T Consensus 169 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 169 -YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp -SSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred -CCeEEEEECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 999887 77642 234 356778887776543
No 167
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=95.77 E-value=0.055 Score=40.68 Aligned_cols=85 Identities=18% Similarity=0.264 Sum_probs=53.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCC--CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFE--LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDT 117 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~--~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~ 117 (276)
.++++||. |++.+|++|-.....|.++++++.. ..++|..+.++++- .+++ + ++..
T Consensus 24 ~~~~vlv~-f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~~~------------~--~v~~ 81 (121)
T 2djj_A 24 DTKDVLIE-FYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA-------NDVP------------D--EIQG 81 (121)
T ss_dssp TTSCEEEE-EECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT-------SCCS------------S--CCSS
T ss_pred CCCCEEEE-EECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc-------cccc------------c--ccCc
Confidence 34566664 6677999999999999999876521 01267777766652 1111 1 5555
Q ss_pred CCcceEEE--cC-e---EeccCC-ChhhHHHHHHcCCC
Q 023845 118 MFTPQLVF--QG-R---VQCQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 118 vYTPq~vV--nG-~---~~~~g~-~~~~~~~~i~~~~~ 148 (276)
+|++++ +| + ....|. +.+.+.+.|.+...
T Consensus 82 --~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 82 --FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp --SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred --CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 999776 44 2 123443 56778888877654
No 168
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=95.76 E-value=0.0065 Score=52.53 Aligned_cols=42 Identities=14% Similarity=0.217 Sum_probs=31.9
Q ss_pred HHHHHH-HHhCCCCCCcceEEEcCeEeccCCChhhHHHHHHcCCC
Q 023845 105 RQKAYV-EALNLDTMFTPQLVFQGRVQCQGNDQDGMLSAIANAPK 148 (276)
Q Consensus 105 Rq~~Y~-~~~g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i~~~~~ 148 (276)
+...++ +.+|+++ ||.++|||+...+..+.+.+.++|.+.++
T Consensus 155 ~~~~~a~~~~GV~G--tPtfvvng~~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 155 AETDEAINQYNVSG--TPSFMIDGILLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHHHCCCS--SSEEEETTEECTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcc--CCEEEECCEEEeCCCCHHHHHHHHHHHhh
Confidence 334456 7889998 99999999865444568889888887654
No 169
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.76 E-value=0.029 Score=45.30 Aligned_cols=82 Identities=13% Similarity=0.233 Sum_probs=56.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|.+.+|++|-.....|.++++++ .+.+..+.+.+|- ....++++++.+ +
T Consensus 23 ~k~vlv-~F~a~WC~~C~~~~p~l~~l~~~~---~~~~~~~~vd~d~------------------~~~l~~~~~v~~--~ 78 (149)
T 3gix_A 23 EKVLVL-RFGRDEDPVCLQLDDILSKTSSDL---SKMAAIYLVDVDQ------------------TAVYTQYFDISY--I 78 (149)
T ss_dssp SSEEEE-EEECTTSHHHHHHHHHHHHHHTTT---TTTEEEEEEETTT------------------CCHHHHHTTCCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHHHHHHHHHHHc---cCceEEEEEECCc------------------CHHHHHHcCCCc--c
Confidence 455555 567889999999999999999876 3457776666641 134678899887 8
Q ss_pred ceEEE--cCeEe-----------ccC--CChhhHHHHHHcC
Q 023845 121 PQLVF--QGRVQ-----------CQG--NDQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vV--nG~~~-----------~~g--~~~~~~~~~i~~~ 146 (276)
|++++ ||+.. ..| .+.+.+...|.+.
T Consensus 79 Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp SEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred CeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 88665 67655 234 3466666666654
No 170
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.75 E-value=0.018 Score=50.45 Aligned_cols=83 Identities=14% Similarity=0.206 Sum_probs=58.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++|||+ |.+.+|++|-.....|.++.+++ .++|..+.+++|- .....+.+++.+ +
T Consensus 26 ~~~v~v~-f~a~wC~~C~~~~p~~~~~~~~~---~~~~~~~~vd~~~------------------~~~~~~~~~v~~--~ 81 (287)
T 3qou_A 26 TTPVLFY-FWSERSQHCLQLTPILESLAAQY---NGQFILAKLDCDA------------------EQMIAAQFGLRA--I 81 (287)
T ss_dssp TSCEEEE-EECTTCTTTTTTHHHHHHHHHHH---TSSSEEEEEETTT------------------CHHHHHTTTCCS--S
T ss_pred CCeEEEE-EECCCChHHHHHHHHHHHHHHHc---CCCeEEEEEeCcc------------------CHHHHHHcCCCC--C
Confidence 4566665 55779999999999999998876 3468887777751 136678899988 7
Q ss_pred ceEEE--cCeEe--ccCC-ChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQ--CQGN-DQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~-~~~~~~~~i~~~~ 147 (276)
|++++ +|+.. ..|. +.+.+...|....
T Consensus 82 Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 82 PTVYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp SEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred CeEEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 88665 88754 3443 4667777776654
No 171
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=95.75 E-value=0.028 Score=45.79 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=56.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCC----CCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFEL----GVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~----~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.+++||..| +.+|+.|+.....|.+|.+++... .++|..+++++|- ...+..+.|.+.++..
T Consensus 59 gk~vlv~F~-a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~-------------~~~~~~~~~~~~~~~~ 124 (183)
T 3lwa_A 59 NQVVILNAW-GQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRD-------------YSRDIAQDFVTDNGLD 124 (183)
T ss_dssp TSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSC-------------CCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEE-CCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCC-------------CCHHHHHHHHHHcCCC
Confidence 456677655 899999999999999988765311 1233788887761 0235566777776652
Q ss_pred -------------------CCCcc-eEEEc--CeEec--cCC-ChhhHHHHHHc
Q 023845 117 -------------------TMFTP-QLVFQ--GRVQC--QGN-DQDGMLSAIAN 145 (276)
Q Consensus 117 -------------------~vYTP-q~vVn--G~~~~--~g~-~~~~~~~~i~~ 145 (276)
-..+| .++|| |+... .|. +.+.+...|++
T Consensus 125 ~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 125 YPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp SCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred ccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 23488 47775 44332 232 45666666654
No 172
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=95.70 E-value=0.034 Score=47.47 Aligned_cols=87 Identities=15% Similarity=0.217 Sum_probs=61.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||+ |++.+|++|-.....|.+|++++ .+++..+.+++|-.. ...+++++..
T Consensus 29 ~~k~vvv~-F~a~wC~~C~~~~p~l~~l~~~~---~~~v~~~~vd~d~~~------------------~l~~~~~v~~-- 84 (222)
T 3dxb_A 29 ADGAILVD-FWAEWCGPCKMIAPILDEIADEY---QGKLTVAKLNIDQNP------------------GTAPKYGIRG-- 84 (222)
T ss_dssp CSSCEEEE-EECTTCHHHHHHHHHHHHHHHHT---TTTCEEEEEETTTCT------------------TTGGGGTCCS--
T ss_pred cCCEEEEE-EECCcCHHHHHHHHHHHHHHHHh---cCCcEEEEEECCCCH------------------HHHHHcCCCc--
Confidence 35566666 45789999999999999999876 345777777776321 1234578877
Q ss_pred cceEEE--cCeEe--ccCC-ChhhHHHHHHcCCCCC
Q 023845 120 TPQLVF--QGRVQ--CQGN-DQDGMLSAIANAPKFP 150 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g~-~~~~~~~~i~~~~~~~ 150 (276)
+|++++ ||+.. ..|. +.+.+...|.+.....
T Consensus 85 ~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 85 IPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp BSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCS
T ss_pred CCEEEEEECCeEEEEeccccChHHHHHHHHhhcccc
Confidence 899888 78754 2343 5788888888776543
No 173
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=95.67 E-value=0.1 Score=41.37 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=33.6
Q ss_pred CCceEEEEecCCCCCC-CHHHHHHHHHhcccCCCCC-CCEEEEEEeeec
Q 023845 41 GGAVLVELFSSQGCKT-SPEAEILVSRLGRGDFELG-VPVIVLAYHVDY 87 (276)
Q Consensus 41 ~~~vvVElFTSqGCss-CP~Ad~~l~~l~~~~~~~~-~~VIaLa~hVdY 87 (276)
.+++|| .|...+|++ |+..-..|.++.+++.... ++|..+++.+|.
T Consensus 35 gk~vll-~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~ 82 (172)
T 2k6v_A 35 DKVVLL-FFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP 82 (172)
T ss_dssp TSEEEE-EEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT
T ss_pred CCEEEE-EEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC
Confidence 455666 455679998 9999999999998762100 268888888873
No 174
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=95.64 E-value=0.0062 Score=50.14 Aligned_cols=96 Identities=14% Similarity=0.188 Sum_probs=57.2
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc---------------cCCCCCCCCCCccccHHHH
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW---------------DYMGWKDPYGSSQWTVRQK 107 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW---------------DylGWkD~fa~~~~t~Rq~ 107 (276)
++|| .|.+.+|+.|......|.++.+++. ..+|..+++.+|.- +..|+. -+...+...
T Consensus 48 ~vlv-~F~a~~C~~C~~~~~~l~~l~~~~~--~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~----~~~~~d~~~ 120 (196)
T 2ywi_A 48 ATVI-MFICNHCPFVKHVQHELVRLANDYM--PKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYP----FPYLYDETQ 120 (196)
T ss_dssp EEEE-EECCSSCHHHHHHHHHHHHHHHHHG--GGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC----SCEEECSSC
T ss_pred eEEE-EEeCCCCccHHHHHHHHHHHHHHHH--hCCcEEEEEECCccccccccCHHHHHHHHHHcCCC----ceEEECCch
Confidence 3555 5668899999999999999987653 23588888887531 111111 011112223
Q ss_pred HHHHHhCCCCCCcceE-EE--cCeEecc-----------CC-ChhhHHHHHHcCC
Q 023845 108 AYVEALNLDTMFTPQL-VF--QGRVQCQ-----------GN-DQDGMLSAIANAP 147 (276)
Q Consensus 108 ~Y~~~~g~~~vYTPq~-vV--nG~~~~~-----------g~-~~~~~~~~i~~~~ 147 (276)
..++.+++.. +|.+ +| ||+.... |. +.+.+.+.|++.+
T Consensus 121 ~~~~~~~v~~--~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 121 EVAKAYDAAC--TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp HHHHHHTCCE--ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCC--CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHH
Confidence 3456677665 8985 44 5766543 22 5667777776554
No 175
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.63 E-value=0.048 Score=43.54 Aligned_cols=96 Identities=17% Similarity=0.273 Sum_probs=52.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee------cccCCCCCCCCCCccccHHHHHHHHHh
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD------YWDYMGWKDPYGSSQWTVRQKAYVEAL 113 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd------YWDylGWkD~fa~~~~t~Rq~~Y~~~~ 113 (276)
.++++||+.| +.+|++|......|.+|.++ .-.|+.+++.-+ |....|+.-+. ...+.....++.+
T Consensus 50 ~gk~vll~F~-a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~ 121 (168)
T 2b1k_A 50 QGKPVLLNVW-ATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYAL---SLFDGDGMLGLDL 121 (168)
T ss_dssp CSSCEEEEEE-CTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSE---EEEETTCHHHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCce---eeECcchHHHHHc
Confidence 4567777666 78999999999999999874 224554443211 11111111000 0112223456677
Q ss_pred CCCCCCcc-eEEEc--CeEec--cC-CChhhHHHHHHc
Q 023845 114 NLDTMFTP-QLVFQ--GRVQC--QG-NDQDGMLSAIAN 145 (276)
Q Consensus 114 g~~~vYTP-q~vVn--G~~~~--~g-~~~~~~~~~i~~ 145 (276)
++.. +| .++|| |+... .| .+.+.+...|++
T Consensus 122 ~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 122 GVYG--APETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp TCCS--SSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred Cccc--cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 8776 89 67885 55432 23 345555554443
No 176
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.63 E-value=0.025 Score=48.74 Aligned_cols=87 Identities=17% Similarity=0.140 Sum_probs=59.3
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcc
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTP 121 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTP 121 (276)
+++||+ |.+.+|++|-.....+.+|++++....+.|..+.++++ .+......+++++.. +|
T Consensus 31 ~~vlv~-F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~----------------~~~~~~l~~~~~v~~--~P 91 (244)
T 3q6o_A 31 SAWAVE-FFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA----------------EETNSAVCRDFNIPG--FP 91 (244)
T ss_dssp SEEEEE-EECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETT----------------STTTHHHHHHTTCCS--SS
T ss_pred CeEEEE-EECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCC----------------chhhHHHHHHcCCCc--cC
Confidence 556665 55679999999999999998876322247888888875 123456788899988 88
Q ss_pred eEEE-c-C------eE-eccCCChhhHHHHHHcCC
Q 023845 122 QLVF-Q-G------RV-QCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 122 q~vV-n-G------~~-~~~g~~~~~~~~~i~~~~ 147 (276)
++++ + | .. ...|.+.+.+...|.+.+
T Consensus 92 t~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 92 TVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDAL 126 (244)
T ss_dssp EEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHH
Confidence 8544 3 2 11 345566777777666543
No 177
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.62 E-value=0.0077 Score=46.64 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=49.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHH--HhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCC--
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVS--RLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNL-- 115 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~--~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~-- 115 (276)
.++++|| .|++.+|++|-.....|. ++.+.+ .+++..+.++++. .+.....++++++
T Consensus 28 ~~k~vlv-~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~~~~vd~~~---------------~~~~~~l~~~~~v~~ 88 (133)
T 3fk8_A 28 THKPTLL-VFGANWCTDCRALDKSLRNQKNTALI---AKHFEVVKIDVGN---------------FDRNLELSQAYGDPI 88 (133)
T ss_dssp HTCCEEE-EEECTTCHHHHHHHHHHTSHHHHHHH---HHHCEEEEEECTT---------------TTSSHHHHHHTTCGG
T ss_pred cCCcEEE-EEcCCCCHHHHHHHHHhCCHHHHHHh---cCCEEEEEEeCCc---------------ccchHHHHHHhCCcc
Confidence 4556666 466889999999999999 887754 3577777777742 1233557888998
Q ss_pred -CCCCcceEEE---cCeEe
Q 023845 116 -DTMFTPQLVF---QGRVQ 130 (276)
Q Consensus 116 -~~vYTPq~vV---nG~~~ 130 (276)
.. +|++++ ||+..
T Consensus 89 ~~~--~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 89 QDG--IPAVVVVNSDGKVR 105 (133)
T ss_dssp GGC--SSEEEEECTTSCEE
T ss_pred CCc--cceEEEECCCCCEE
Confidence 77 999765 67654
No 178
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=95.60 E-value=0.017 Score=46.26 Aligned_cols=45 Identities=20% Similarity=0.370 Sum_probs=31.1
Q ss_pred CCceEEEEecCCCCC-CCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCK-TSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCs-sCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.+++||. |....|+ .|+..-..|.+|.+++.....+|..|++.+|
T Consensus 33 gk~vll~-f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 33 GEVWLAD-FIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp TCCEEEE-EECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCEEEEE-EEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 4566665 5578899 9998888888887654321224777788776
No 179
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=95.58 E-value=0.015 Score=46.04 Aligned_cols=91 Identities=15% Similarity=0.173 Sum_probs=52.3
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec---------ccCCCCCCCCCCccccHHHHHHHHHh--
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY---------WDYMGWKDPYGSSQWTVRQKAYVEAL-- 113 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY---------WDylGWkD~fa~~~~t~Rq~~Y~~~~-- 113 (276)
-|.+|+..+|+.|-.|.++|.+..-.+ .+ .-+.-+. ...+||+|=|....-+=|.-......
T Consensus 6 ~i~iY~~~~C~~C~ka~~~L~~~gi~y-----~~--~di~~~~~~~~~l~~~~~~~g~~~l~n~~~~~~k~l~~~~~~~~ 78 (120)
T 2kok_A 6 SVTIYGIKNCDTMKKARIWLEDHGIDY-----TF--HDYKKEGLDAETLDRFLKTVPWEQLLNRAGTTFRKLPEDVRSNV 78 (120)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCE-----EE--EEHHHHCCCHHHHHHHHHHSCGGGTBCSSSHHHHHSCHHHHHSC
T ss_pred EEEEEECCCChHHHHHHHHHHHcCCcE-----EE--EeeeCCCCCHHHHHHHHHHcChHhhccCCchhhHhcCchhhccC
Confidence 378999999999999999999865432 11 1111111 13456665555443222221111110
Q ss_pred -----------CCCCCCcceEEEcCeEeccCCChhhHHHHH
Q 023845 114 -----------NLDTMFTPQLVFQGRVQCQGNDQDGMLSAI 143 (276)
Q Consensus 114 -----------g~~~vYTPq~vVnG~~~~~g~~~~~~~~~i 143 (276)
+-.-+=.|-++.+++ ..+|.+++.|...+
T Consensus 79 ~~~~~~~~l~~~p~likrPiv~~~~~-~~vGf~~~~~~~~l 118 (120)
T 2kok_A 79 DAASARELMLAQPSMVKRPVLERDGK-LMVGFKPAQYEAYF 118 (120)
T ss_dssp CHHHHHHHHHHCGGGBCSSEEEETTE-EEECCCHHHHHHHH
T ss_pred CHHHHHHHHHhCcccEECCEEEECCE-EEEeCCHHHHHHHh
Confidence 001245898888776 56788888887755
No 180
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=95.56 E-value=0.018 Score=48.97 Aligned_cols=81 Identities=4% Similarity=0.063 Sum_probs=60.9
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
+||=.|+..+|+.|-.-+..|.+|++++ .+.+..+-..|| ..|+ ++..+++++ .|++
T Consensus 43 ~VVVdF~A~WCgPCk~m~PvleelA~e~---~~~v~f~kVDVD-----------e~~e-------~a~~y~V~s--iPT~ 99 (160)
T 2av4_A 43 LVCIRFGHDYDPDCMKMDELLYKVADDI---KNFCVIYLVDIT-----------EVPD-------FNTMYELYD--PVSV 99 (160)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHH---TTTEEEEEEETT-----------TCCT-------TTTTTTCCS--SEEE
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHc---cCCcEEEEEECC-----------CCHH-------HHHHcCCCC--CCEE
Confidence 4556788999999999999999999986 456888888887 2333 477899998 6665
Q ss_pred --EEcCeEe-----------ccCC--ChhhHHHHHHcCC
Q 023845 124 --VFQGRVQ-----------CQGN--DQDGMLSAIANAP 147 (276)
Q Consensus 124 --vVnG~~~-----------~~g~--~~~~~~~~i~~~~ 147 (276)
+.||+.. .+|. +.+.+.+.|....
T Consensus 100 ~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 100 MFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 6799884 5676 4667777766543
No 181
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=95.52 E-value=0.016 Score=47.51 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=49.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee-------cccCCCCCCCCCCccccHHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD-------YWDYMGWKDPYGSSQWTVRQKAYVEA 112 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd-------YWDylGWkD~fa~~~~t~Rq~~Y~~~ 112 (276)
..+++||..|.+-+|+.|+..-..|.++.++ ++|..+++.+| |....|+. +| +-..+.....++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-----~~v~vv~Is~D~~~~~~~~~~~~~~~-~~--~~l~D~~~~~~~~ 114 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-----SGATVLCVSKDLPFAQKRFCGAEGTE-NV--MPASAFRDSFGED 114 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-----TTCEEEEEESSCHHHHTTCC-------CE--EEEECTTSSHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-----cCCEEEEEECCCHHHHHHHHHHcCCC-Cc--eEeeCCHHHHHHH
Confidence 3568888888888899999999999998764 35666666666 33333331 11 2222323445677
Q ss_pred hCCCCC-------Ccce-EEEc--CeEec
Q 023845 113 LNLDTM-------FTPQ-LVFQ--GRVQC 131 (276)
Q Consensus 113 ~g~~~v-------YTPq-~vVn--G~~~~ 131 (276)
+|+..+ ..|. ++|| |+...
T Consensus 115 ~gv~~~~~~~~g~~~p~~~lid~~G~I~~ 143 (175)
T 1xvq_A 115 YGVTIADGPMAGLLARAIVVIGADGNVAY 143 (175)
T ss_dssp TTCBBCSSTTTTSBCSEEEEECTTSBEEE
T ss_pred hCCcccccccCCcccceEEEECCCCeEEE
Confidence 776542 1255 6665 55433
No 182
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=95.52 E-value=0.022 Score=46.26 Aligned_cols=83 Identities=16% Similarity=0.242 Sum_probs=51.4
Q ss_pred CceEEEEecCCC--CCCCHHHHHHHHHhcccCCCCCCCEE--EEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCC
Q 023845 42 GAVLVELFSSQG--CKTSPEAEILVSRLGRGDFELGVPVI--VLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDT 117 (276)
Q Consensus 42 ~~vvVElFTSqG--CssCP~Ad~~l~~l~~~~~~~~~~VI--aLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~ 117 (276)
+.+|| +|++.. |+.|-.....|.+|++++ ++|. .+.+.+| .....++++++++
T Consensus 35 ~~~vv-~f~~~~~~C~~C~~l~P~l~~la~~~----~~v~~~~~~Vd~d------------------~~~~la~~~~V~~ 91 (142)
T 2es7_A 35 GDGVI-LLSSDPRRTPEVSDNPVMIAELLREF----PQFDWQVAVADLE------------------QSEAIGDRFNVRR 91 (142)
T ss_dssp CSEEE-EECCCSCC----CCHHHHHHHHHHTC----TTSCCEEEEECHH------------------HHHHHHHTTTCCS
T ss_pred CCEEE-EEECCCCCCccHHHHHHHHHHHHHHh----cccceeEEEEECC------------------CCHHHHHhcCCCc
Confidence 34666 566654 999988899999998864 3444 4444443 4566788999998
Q ss_pred CCcceEEE--cCeEe--ccCC-ChhhHHHHHHcCCCC
Q 023845 118 MFTPQLVF--QGRVQ--CQGN-DQDGMLSAIANAPKF 149 (276)
Q Consensus 118 vYTPq~vV--nG~~~--~~g~-~~~~~~~~i~~~~~~ 149 (276)
+|++++ ||+.. ..|. +.+.+.+.|.+....
T Consensus 92 --iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 92 --FPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp --SSEEEEESCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred --CCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 888766 88653 2343 567788888776543
No 183
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=95.50 E-value=0.013 Score=49.21 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=30.9
Q ss_pred CceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeec
Q 023845 42 GAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
.++|||.| +-+||+|-..+..| .++.+++ .++|...-.|+..
T Consensus 15 ~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 15 APAVVEFF-SFYCPPCYAFSQTMGVDQAIRHVL---PQGSRMVKYHVSL 59 (189)
T ss_dssp CCSEEEEE-CTTCHHHHHHHHTSCHHHHHHTTC---CTTCCEEEEECSS
T ss_pred CCEEEEEE-CCCChhHHHHhHhccchHHHHHhC---CCCCEEEEEechh
Confidence 46788777 89999999998876 5787765 2356666666654
No 184
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=95.46 E-value=0.013 Score=48.84 Aligned_cols=44 Identities=16% Similarity=0.091 Sum_probs=34.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.+++||..|.+..|+.|+..-..|.++.+++. ..+|..+++.+|
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~--~~~v~vv~Vs~d 88 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFE--DRDAQILGVSID 88 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHH--TTTEEEEEEESS
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHH--HCCCEEEEEECC
Confidence 46777776669999999999999999887653 236888888776
No 185
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=95.35 E-value=0.064 Score=43.91 Aligned_cols=66 Identities=12% Similarity=0.165 Sum_probs=44.3
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHH-hCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEA-LNLD 116 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~-~g~~ 116 (276)
++++|| .|..-.|+.|+..-..|.+|.+++. ..++..+++.+|.+.. ..+.-.+..+.|.+. ++..
T Consensus 38 Gk~vlv-~F~atwC~~C~~~~p~l~~l~~~~~--~~~~~vi~is~d~~~~-------~~~d~~~~~~~~~~~~~~~~ 104 (180)
T 3kij_A 38 GKVSLV-VNVASDCQLTDRNYLGLKELHKEFG--PSHFSVLAFPCNQFGE-------SEPRPSKEVESFARKNYGVT 104 (180)
T ss_dssp TSEEEE-EEECSSSTTHHHHHHHHHHHHHHHT--TTSEEEEEEECCCSTT-------CCCSCHHHHHHHHHHHHCCC
T ss_pred CCEEEE-EEEecCCCCcHHHHHHHHHHHHHhc--cCCeEEEEEECCcccc-------CCCCCHHHHHHHHHHhcCCC
Confidence 345555 6677799999999999999998764 3468889998874211 012234556667776 6644
No 186
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=95.29 E-value=0.042 Score=42.51 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=50.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||..| +..|+.|......|.++.+++.. ..++..+++.+|- ....+|.. |.-. ..+......+
T Consensus 27 ~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~-~~~~~vv~i~~d~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 102 (144)
T 1o73_A 27 VGKTVFLYFS-ASWCPPCRGFTPVLAEFYEKHHV-AKNFEVVLISWDENESDFHDYYGKMPWLA-LPFD-QRSTVSELGK 102 (144)
T ss_dssp TTCEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TTTEEEEEEECCSSHHHHHHHHTTCSSEE-CCTT-CHHHHHHHHH
T ss_pred CCCEEEEEEE-CcCCHHHHHHHHHHHHHHHHhcc-CCCEEEEEEeCCCCHHHHHHHHHhCCceE-eecc-chhHHHHHHH
Confidence 3456666555 67999999999999999876521 2477777777762 11222221 1100 1144566778
Q ss_pred HhCCCCCCcceE-EEc
Q 023845 112 ALNLDTMFTPQL-VFQ 126 (276)
Q Consensus 112 ~~g~~~vYTPq~-vVn 126 (276)
.+++.. +|++ +||
T Consensus 103 ~~~v~~--~Pt~~lid 116 (144)
T 1o73_A 103 TFGVES--IPTLITIN 116 (144)
T ss_dssp HHTCCS--SSEEEEEE
T ss_pred HcCCCC--CCEEEEEE
Confidence 888876 8884 555
No 187
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=95.25 E-value=0.045 Score=42.58 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=50.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCccccHHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
.++++||..| +..|+.|......|.+|.+++.+ ..++..+++.+|- ....+|. .|.-. ..+......+
T Consensus 27 ~gk~vll~F~-a~wC~~C~~~~~~l~~l~~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~-~~~~~-~~d~~~~~~~ 102 (144)
T 1i5g_A 27 AGKTVFFYFS-ASWCPPSRAFTPQLIDFYKAHAE-KKNFEVMLISWDESAEDFKDYYAKMPWL-ALPFE-DRKGMEFLTT 102 (144)
T ss_dssp TTSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHTT-TTTEEEEEEECCSSHHHHHHHHTTCSSE-ECCTT-CHHHHHHHHH
T ss_pred CCCEEEEEEE-CCCCHHHHHHHHHHHHHHHHhcc-CCCEEEEEEeCCCCHHHHHHHHHhCCcc-ccccC-chHHHHHHHH
Confidence 3456666655 57999999999999999886531 1477777777762 1222331 11111 1144566788
Q ss_pred HhCCCCCCcce-EEEc
Q 023845 112 ALNLDTMFTPQ-LVFQ 126 (276)
Q Consensus 112 ~~g~~~vYTPq-~vVn 126 (276)
.+++.. +|+ ++||
T Consensus 103 ~~~v~~--~P~~~lid 116 (144)
T 1i5g_A 103 GFDVKS--IPTLVGVE 116 (144)
T ss_dssp HTTCCS--SSEEEEEE
T ss_pred HcCCCC--CCEEEEEE
Confidence 888876 888 5565
No 188
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=95.11 E-value=0.018 Score=45.14 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=20.9
Q ss_pred EEEecCCCCCCCHHHHHHHHHhc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLG 68 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~ 68 (276)
|.+|+..+|+.|-.|.++|.+..
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~g 24 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEHK 24 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCC
Confidence 67999999999999999999743
No 189
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.02 E-value=0.023 Score=44.41 Aligned_cols=66 Identities=11% Similarity=0.022 Sum_probs=44.7
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC----CCC
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD----TMF 119 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~----~vY 119 (276)
.+|=.|++.+|++|-.....|.++++++. .+++..+.+.++- ....++++++. ...
T Consensus 28 ~vlv~f~a~wC~~C~~~~p~~~~l~~~~~--~~~v~~~~vd~~~------------------~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 28 TWIVEFFANWSNDCQSFAPIYADLSLKYN--CTGLNFGKVDVGR------------------YTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CEEEEECCTTCSTTTTTHHHHHHHHHHHC--SSSCEEEECCTTT------------------CHHHHHHTTCCCCSSSSC
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhC--CCCeEEEEEeCcc------------------CHHHHHHccCcccCCcCC
Confidence 44446778899999999999999988752 2467666655541 23467788887 013
Q ss_pred cceEEE--cCeE
Q 023845 120 TPQLVF--QGRV 129 (276)
Q Consensus 120 TPq~vV--nG~~ 129 (276)
+|++++ ||+.
T Consensus 88 ~Pt~~~~~~G~~ 99 (137)
T 2dj0_A 88 LPTLILFQGGKE 99 (137)
T ss_dssp SSEEEEESSSSE
T ss_pred CCEEEEEECCEE
Confidence 899776 5654
No 190
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=95.02 E-value=0.014 Score=53.78 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=51.2
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
|..|+...|++|-.....+++++++. + -+.+|- .+ ..+.++...+++++++ .|++++
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l-----~----~Vd~d~---~d---------~~~~~~~la~~~gI~~--vPT~~i 257 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQV-----P----YVECSP---NG---------PGTPQAQECTEAGITS--YPTWII 257 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGS-----C----EEESCS---SC---------SSSCCCHHHHTTTCCS--TTEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHc-----C----EEEEee---cC---------chhhHHHHHHHcCCcc--cCeEEE
Confidence 46789999999999999999998643 1 122320 00 0022455678899998 888999
Q ss_pred cCeEeccCCChhhHHHHHH
Q 023845 126 QGRVQCQGNDQDGMLSAIA 144 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~ 144 (276)
||+...+..+.+++.+.+.
T Consensus 258 ~G~~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 258 NGRTYTGVRSLEALAVASG 276 (291)
T ss_dssp TTEEEESCCCHHHHHHHTC
T ss_pred CCEEecCCCCHHHHHHHHC
Confidence 9987544445666665443
No 191
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=95.00 E-value=0.012 Score=50.23 Aligned_cols=100 Identities=15% Similarity=0.207 Sum_probs=60.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc---------------cCCCCCCCCCCccccHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW---------------DYMGWKDPYGSSQWTVR 105 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW---------------DylGWkD~fa~~~~t~R 105 (276)
.+.++|=.|.+..|+.|...-..|.+|.+++. ..+|..+++.+|-- ...|+. -+-..+.
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~--~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~----~~~l~D~ 131 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYA--GQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYG----FPYLKDA 131 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHT--TTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC----SCEEECT
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHH--hCCcEEEEEECCcccccccCCHHHHHHHHHHhCCC----ccEEECC
Confidence 34444446667899999999999999988763 34588888888521 111110 1112223
Q ss_pred HHHHHHHhCCCCCCcce-EEEc--CeEeccCC------------ChhhHHHHHHcCCC
Q 023845 106 QKAYVEALNLDTMFTPQ-LVFQ--GRVQCQGN------------DQDGMLSAIANAPK 148 (276)
Q Consensus 106 q~~Y~~~~g~~~vYTPq-~vVn--G~~~~~g~------------~~~~~~~~i~~~~~ 148 (276)
....++.+++.. +|. ++|| |+....|. +.+.+.++|++.+.
T Consensus 132 ~~~~~~~~~v~~--~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 132 SQSVAKAYGAAC--TPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp TCHHHHHHTCCE--ESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred ccHHHHHcCCCC--CCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 345567778776 898 5664 65544332 24667777776543
No 192
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=94.98 E-value=0.059 Score=42.09 Aligned_cols=79 Identities=15% Similarity=0.152 Sum_probs=49.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec--------ccCCCCCCCCCCcccc-HHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY--------WDYMGWKDPYGSSQWT-VRQKAYVE 111 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY--------WDylGWkD~fa~~~~t-~Rq~~Y~~ 111 (276)
++++||. |.+.+|+.|......|.++.+++.+ ..++..+++.+|- ....+|. .-+-.. +.....++
T Consensus 28 gk~vll~-F~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vv~v~~d~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~ 102 (146)
T 1o8x_A 28 GKLVFFY-FSASWCPPARGFTPQLIEFYDKFHE-SKNFEVVFCTWDEEEDGFAGYFAKMPWL---AVPFAQSEAVQKLSK 102 (146)
T ss_dssp TCEEEEE-EECTTCHHHHHHHHHHHHHHHHHTT-TTTEEEEEEECCCSHHHHHHHHTTCSSE---ECCGGGHHHHHHHHH
T ss_pred CCEEEEE-EEccCCHHHHHHHHHHHHHHHHhhh-cCCeEEEEEeCCCCHHHHHHHHHHCCce---eeccchhhHHHHHHH
Confidence 4556665 5567999999999999999876521 1477777777762 1222331 111111 44566788
Q ss_pred HhCCCCCCcce-EEEc
Q 023845 112 ALNLDTMFTPQ-LVFQ 126 (276)
Q Consensus 112 ~~g~~~vYTPq-~vVn 126 (276)
.+++.. +|+ ++||
T Consensus 103 ~~~v~~--~Pt~~lid 116 (146)
T 1o8x_A 103 HFNVES--IPTLIGVD 116 (146)
T ss_dssp HTTCCS--SSEEEEEE
T ss_pred HhCCCC--CCEEEEEE
Confidence 888876 898 5555
No 193
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=94.92 E-value=0.043 Score=46.23 Aligned_cols=84 Identities=11% Similarity=0.215 Sum_probs=53.6
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
.+|=.|++.+|++|-.....+.+++++.....++|..+.++++ .....++++++.+ +|++
T Consensus 149 ~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~------------------~~~~l~~~~~v~~--~Pt~ 208 (241)
T 3idv_A 149 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT------------------AETDLAKRFDVSG--YPTL 208 (241)
T ss_dssp EEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT------------------TCHHHHHHTTCCS--SSEE
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC------------------CCHHHHHHcCCcc--cCEE
Confidence 4555778899999966666666665543211345666666554 1245788899998 8887
Q ss_pred EE--cCeEec-cC-CChhhHHHHHHcCC
Q 023845 124 VF--QGRVQC-QG-NDQDGMLSAIANAP 147 (276)
Q Consensus 124 vV--nG~~~~-~g-~~~~~~~~~i~~~~ 147 (276)
++ +|+... .| .+.+.+...|.+..
T Consensus 209 ~~~~~g~~~~~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 209 KIFRKGRPYDYNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp EEEETTEEEECCSCCSHHHHHHHHHHHT
T ss_pred EEEECCeEEEecCCCCHHHHHHHHHhhh
Confidence 66 676543 23 34667777777654
No 194
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=94.88 E-value=0.017 Score=46.51 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=33.6
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
++||..|.+.+|+.|+..-..|.++.+++. ..+|..+++.+|
T Consensus 31 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~--~~~v~vv~vs~d 72 (161)
T 3drn_A 31 NIVLYFYPKDDTPGSTREASAFRDNWDLLK--DYDVVVIGVSSD 72 (161)
T ss_dssp EEEEEECSCTTCHHHHHHHHHHHHTHHHHH--TTCEEEEEEESC
T ss_pred CEEEEEEcCCCCCchHHHHHHHHHHHHHHH--HcCCEEEEEeCC
Confidence 378877779999999999999999988763 345888888775
No 195
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=94.87 E-value=0.15 Score=40.42 Aligned_cols=45 Identities=13% Similarity=0.179 Sum_probs=34.0
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
..+++||..| +..|+.|+..-..|.++.+++. ..+|..+++++|-
T Consensus 31 ~gk~vll~f~-a~~C~~C~~~~~~l~~l~~~~~--~~~~~vv~vs~d~ 75 (170)
T 2p5q_A 31 KGKVLLIVNV-ASKCGMTNSNYAEMNQLYEKYK--DQGLEILAFPCNQ 75 (170)
T ss_dssp TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHG--GGTEEEEEEECCT
T ss_pred CCCEEEEEEE-eccCCccHHHHHHHHHHHHHhc--cCCEEEEEEECCC
Confidence 3456777555 5799999999999999887653 2358888888864
No 196
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=94.83 E-value=0.1 Score=42.66 Aligned_cols=93 Identities=15% Similarity=0.205 Sum_probs=52.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee--------cccCCCCCCCCCCccccHHHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD--------YWDYMGWKDPYGSSQWTVRQKAYVEA 112 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd--------YWDylGWkD~fa~~~~t~Rq~~Y~~~ 112 (276)
.+++||..| +.+|+.|......|.++.++ +|..+++.+| |.+..++.-+. ...+......+.
T Consensus 58 gk~vll~F~-a~~C~~C~~~~~~l~~l~~~------~v~vv~vs~~d~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~ 127 (176)
T 3kh7_A 58 GKPALVNVW-GTWCPSCRVEHPELTRLAEQ------GVVIYGINYKDDNAAAIKWLNELHNPYLL---SISDADGTLGLD 127 (176)
T ss_dssp SSCEEEEEE-CTTCHHHHHHHHHHHHHHHT------TCEEEEEEESCCHHHHHHHHHHTTCCCSE---EEEETTCHHHHH
T ss_pred CCEEEEEEE-CCcCHHHHHHHHHHHHHHHC------CCEEEEEeCCCCHHHHHHHHHHcCCCCce---EEECCcchHHHH
Confidence 467777666 78999999999999999874 3444444442 11222221110 011222345666
Q ss_pred hCCCCCCcc-eEEEc--CeEec--cC-CChhhHHHHHHc
Q 023845 113 LNLDTMFTP-QLVFQ--GRVQC--QG-NDQDGMLSAIAN 145 (276)
Q Consensus 113 ~g~~~vYTP-q~vVn--G~~~~--~g-~~~~~~~~~i~~ 145 (276)
+++.. +| .++|| |+... .| .+.+.+...|.+
T Consensus 128 ~~v~~--~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 128 LGVYG--APETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp HTCCS--SCEEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred cCCCC--CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 77766 89 57785 54332 23 245555555544
No 197
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=94.82 E-value=0.046 Score=43.75 Aligned_cols=66 Identities=8% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++|| .|.+.+|++|-.....|.++++++ .+++..+.+.+|- .+ ..++++++.+ +
T Consensus 23 ~k~vlv-~F~a~wC~~C~~~~p~l~~l~~~~---~~~v~~~~vd~d~-----------~~-------~~~~~~~i~~--~ 78 (142)
T 1qgv_A 23 DRVVVI-RFGHDWDPTCMKMDEVLYSIAEKV---KNFAVIYLVDITE-----------VP-------DFNKMYELYD--P 78 (142)
T ss_dssp SSEEEE-EEECTTSHHHHHHHHHHHHHHHHH---TTTEEEEEEETTT-----------CC-------TTTTSSCSCS--S
T ss_pred CCEEEE-EEECCCCHHHHHHHHHHHHHHHHh---CCCeEEEEEcccc-----------CH-------HHHHHcCCCC--C
Confidence 445555 566789999999999999998865 3567777777762 11 2355688887 7
Q ss_pred ceEE--EcCeEe
Q 023845 121 PQLV--FQGRVQ 130 (276)
Q Consensus 121 Pq~v--VnG~~~ 130 (276)
|+++ -||+..
T Consensus 79 Pt~~~~~~G~~v 90 (142)
T 1qgv_A 79 CTVMFFFRNKHI 90 (142)
T ss_dssp CEEEEEETTEEE
T ss_pred CEEEEEECCcEE
Confidence 8764 477654
No 198
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=94.73 E-value=0.059 Score=50.45 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=59.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-------------ccCCCCCCCCCCccccHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-------------WDYMGWKDPYGSSQWTVRQK 107 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-------------WDylGWkD~fa~~~~t~Rq~ 107 (276)
.+++||..| +.+|+.|......|.+|.+++. ..+|..+++++|- .+..|+. -|...+...
T Consensus 82 GK~vLl~F~-atwC~~C~~~~p~L~~l~~~~~--~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~----fpv~~D~~~ 154 (352)
T 2hyx_A 82 GKVVLIDFW-AYSCINCQRAIPHVVGWYQAYK--DSGLAVIGVHTPEYAFEKVPGNVAKGAANLGIS----YPIALDNNY 154 (352)
T ss_dssp TSEEEEEEE-CTTCHHHHHHHHHHHHHHHHHG--GGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCC----SCEEECTTS
T ss_pred CCEEEEEEE-CCCChhHHHHHHHHHHHHHHhh--cCCeEEEEEECCcccccCCHHHHHHHHHHcCCC----ccEEeCCcH
Confidence 466777655 6899999999999999988763 2468899998762 1111111 011222223
Q ss_pred HHHHHhCCCCCCcce-EEEc--CeEec--cC-CChhhHHHHHHcC
Q 023845 108 AYVEALNLDTMFTPQ-LVFQ--GRVQC--QG-NDQDGMLSAIANA 146 (276)
Q Consensus 108 ~Y~~~~g~~~vYTPq-~vVn--G~~~~--~g-~~~~~~~~~i~~~ 146 (276)
...+.+++.. +|+ ++|| |+... .| .+.+.+...|++.
T Consensus 155 ~l~~~ygV~~--~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 155 ATWTNYRNRY--WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp HHHHHTTCCE--ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred HHHHHcCCCc--cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4566677765 899 6674 55432 23 3466666666543
No 199
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=94.65 E-value=0.26 Score=40.49 Aligned_cols=83 Identities=10% Similarity=0.128 Sum_probs=59.2
Q ss_pred eEEEEecCCCC--CCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcc
Q 023845 44 VLVELFSSQGC--KTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTP 121 (276)
Q Consensus 44 vvVElFTSqGC--ssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTP 121 (276)
.+|=+|+...| ..|-.-..+|.+|++++ .++|...-..|| .....+.+||++++-|=
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~---~~~v~~~KVdvD------------------e~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAF---PGRLVAAEVAAE------------------AERGLMARFGVAVCPSL 93 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTS---TTTEEEEEECGG------------------GHHHHHHHHTCCSSSEE
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHc---cCCcEEEEEECC------------------CCHHHHHHcCCccCCEE
Confidence 34556777789 99999999999999987 457777666665 45678999999994444
Q ss_pred eEEEcCeEec--cCC-ChhhHHHHHHcCC
Q 023845 122 QLVFQGRVQC--QGN-DQDGMLSAIANAP 147 (276)
Q Consensus 122 q~vVnG~~~~--~g~-~~~~~~~~i~~~~ 147 (276)
-++-||+..- +|. +.+.+.+.|.+.+
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4566887643 343 4566766666543
No 200
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=94.64 E-value=0.21 Score=40.21 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=32.0
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||. |.+..|+.|+ .-..|.++.+++. ..+|..|++.+|
T Consensus 31 ~Gk~vll~-F~a~wC~~C~-~~~~l~~l~~~~~--~~~v~vv~vs~d 73 (171)
T 3cmi_A 31 KGKVVLIV-NVASKCGFTP-QYKELEALYKRYK--DEGFTIIGFPCN 73 (171)
T ss_dssp TTCEEEEE-EEESSSCCHH-HHHHHHHHHHHHG--GGTEEEEEEEEC
T ss_pred CCCEEEEE-EEecCCCcch-hHHHHHHHHHHhc--cCCeEEEEEECc
Confidence 34677776 5589999999 8888998887653 235888888774
No 201
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=94.63 E-value=0.02 Score=56.13 Aligned_cols=64 Identities=20% Similarity=0.280 Sum_probs=45.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
-|.+|+..+||.|..+.++|.++.-.+ . -+.++. .++-.+.+..+.+..|.++ +|+++
T Consensus 19 ~v~vy~~~~Cp~C~~~k~~L~~~~i~~-----~----~~dv~~-----------~~~~~~~~~~l~~~~g~~t--vP~v~ 76 (598)
T 2x8g_A 19 AVILFSKTTCPYCKKVKDVLAEAKIKH-----A----TIELDQ-----------LSNGSAIQKCLASFSKIET--VPQMF 76 (598)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHTTCCC-----E----EEEGGG-----------STTHHHHHHHTHHHHSCCC--SCEEE
T ss_pred CEEEEECCCChhHHHHHHHHHHCCCCc-----E----EEEccc-----------CcchHHHHHHHHHHhCCce--eCEEE
Confidence 378999999999999999999876532 1 133331 1122344566666677776 99999
Q ss_pred EcCeEe
Q 023845 125 FQGRVQ 130 (276)
Q Consensus 125 VnG~~~ 130 (276)
+||+..
T Consensus 77 i~g~~i 82 (598)
T 2x8g_A 77 VRGKFI 82 (598)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 999754
No 202
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=94.61 E-value=0.011 Score=48.84 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=33.4
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.+++||..|-+..|+.|+..-..|.++.+++. ..+|..+++.+|
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~--~~~v~vv~vs~d 74 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELK--KLGVEVYSVSTD 74 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHH--HTTEEEEEEESS
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHH--HcCCEEEEEECC
Confidence 46677766659999999999999988887652 236778888776
No 203
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=94.56 E-value=0.075 Score=42.02 Aligned_cols=58 Identities=12% Similarity=-0.065 Sum_probs=45.1
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
+++||..|.+.+|+.|+..-..|.++.+++. ..++..+++.+|- .+..+.|.+.++..
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~--~~~~~vv~is~d~---------------~~~~~~~~~~~~~~ 94 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFE--NDDSAALAISVGP---------------PPTHKIWATQSGFT 94 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTS--SSSEEEEEEESCC---------------HHHHHHHHHHHTCC
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHH--HCCcEEEEEeCCC---------------HHHHHHHHHhcCCC
Confidence 3788877779999999999999999988763 3478888888751 35667788888763
No 204
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=94.55 E-value=0.031 Score=44.85 Aligned_cols=43 Identities=12% Similarity=0.071 Sum_probs=33.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.++++||..|.+-+|+.|+..-..|.++.+++ +++..+++.+|
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~----~~~~vv~is~d 85 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL----GDVNVYTISAD 85 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH----SSCEEEEEECS
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc----CCCEEEEEECC
Confidence 35688888887778999999999999988764 46667777666
No 205
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.52 E-value=0.074 Score=48.04 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=58.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||+ |.+.+|++|-.....+.+++++. .+.+..+.+.+|- +.....++.+++.. +
T Consensus 35 ~~~vlV~-F~A~wC~~C~~~~p~~~~la~~~---~~~~~~~~v~~d~----------------~~~~~l~~~~~I~~--~ 92 (298)
T 3ed3_A 35 NYTSLVE-FYAPWCGHCKKLSSTFRKAAKRL---DGVVQVAAVNCDL----------------NKNKALCAKYDVNG--F 92 (298)
T ss_dssp SSCEEEE-EECTTCHHHHHHHHHHHHHHHHT---TTTSEEEEEETTS----------------TTTHHHHHHTTCCB--S
T ss_pred CCeEEEE-EECCCCHHHHHHHHHHHHHHHHc---cCCcEEEEEEccC----------------ccCHHHHHhCCCCc--c
Confidence 4566665 55789999999999999998875 3346666666651 12356788899988 7
Q ss_pred ceEEE--cCe-------------------Eec-cCCChhhHHHHHHcCCC
Q 023845 121 PQLVF--QGR-------------------VQC-QGNDQDGMLSAIANAPK 148 (276)
Q Consensus 121 Pq~vV--nG~-------------------~~~-~g~~~~~~~~~i~~~~~ 148 (276)
|++++ +|+ ... +..+.+.+...|.+...
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~ 142 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR 142 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc
Confidence 88655 664 122 23346677777776553
No 206
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=94.34 E-value=0.059 Score=45.14 Aligned_cols=103 Identities=12% Similarity=0.058 Sum_probs=60.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec-------ccCC----CCCCCCCCccccHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY-------WDYM----GWKDPYGSSQWTVRQKAY 109 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY-------WDyl----GWkD~fa~~~~t~Rq~~Y 109 (276)
.+++||..|-+..|+.|+..-..|.++.+++. ..+|..+++.+|- .... |+. .+.-|-..+.....
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~--~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~-~~~~p~l~D~~~~~ 112 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFS--DIGCEVLACSMDSEYSHLAWTSIERKRGGLG-QMNIPILADKTKCI 112 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHH--TTTEEEEEEESSCHHHHHHHHHSCGGGTCCC-SCSSCEEECTTCHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHH--HCCCEEEEEeCCCHHHHHHHHHHHHhhCCCC-CCceeEEECCchHH
Confidence 45677765559999999999999999887653 3468888888773 1111 111 11222333434556
Q ss_pred HHHhCCC----CCCcce-EEEc--CeEecc--C-----CChhhHHHHHHcC
Q 023845 110 VEALNLD----TMFTPQ-LVFQ--GRVQCQ--G-----NDQDGMLSAIANA 146 (276)
Q Consensus 110 ~~~~g~~----~vYTPq-~vVn--G~~~~~--g-----~~~~~~~~~i~~~ 146 (276)
++.+|+. ...+|. ++|| |+.... | .+.+++.+.|++.
T Consensus 113 ~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 113 MKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 7777765 114886 6675 443332 2 2345666666543
No 207
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=94.22 E-value=0.036 Score=45.89 Aligned_cols=44 Identities=18% Similarity=0.076 Sum_probs=33.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
++++||..|-+..|+.|+..-..|.++.+++. ..++..+++.+|
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~--~~~v~vv~Is~d 74 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFK--ERNVELLGCSVD 74 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHH--HTTEEEEEEESS
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEEeC
Confidence 45677766669999999998888888877652 246778888776
No 208
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=93.97 E-value=0.032 Score=44.80 Aligned_cols=24 Identities=21% Similarity=0.396 Sum_probs=21.6
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGR 69 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~ 69 (276)
|.+|+..+|+.|-.|.++|.+..-
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~gi 26 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEHEI 26 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTC
T ss_pred EEEEeCCCChHHHHHHHHHHHcCC
Confidence 679999999999999999998643
No 209
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=93.91 E-value=0.081 Score=43.99 Aligned_cols=104 Identities=14% Similarity=0.119 Sum_probs=59.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc-CCCCCCC---------CCCccccHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD-YMGWKDP---------YGSSQWTVRQKAYV 110 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD-ylGWkD~---------fa~~~~t~Rq~~Y~ 110 (276)
.+++||..|-+..|+.|+..-..|.++.+++. ..+|..+++++|--+ ..-|... +.-|-..+.....+
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~--~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFR--KLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHH--TTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 45677766669999999999999999887653 346888888887311 0001111 11122233334566
Q ss_pred HHhCCC----CCCcce-EEEc--CeEecc-------CCChhhHHHHHHcC
Q 023845 111 EALNLD----TMFTPQ-LVFQ--GRVQCQ-------GNDQDGMLSAIANA 146 (276)
Q Consensus 111 ~~~g~~----~vYTPq-~vVn--G~~~~~-------g~~~~~~~~~i~~~ 146 (276)
+.+|+. ...+|. ++|| |+.... +.+.+++...|++.
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 777765 113785 6665 443222 23445666666543
No 210
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=93.81 E-value=0.33 Score=39.68 Aligned_cols=44 Identities=20% Similarity=0.159 Sum_probs=32.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
.+++||.. .+..|+.|+..-..|.+|.+++. ..+|..+++.+|-
T Consensus 49 Gk~vlv~F-~atwC~~C~~~~p~l~~l~~~~~--~~~v~vv~vs~d~ 92 (181)
T 2p31_A 49 GSVSLVVN-VASECGFTDQHYRALQQLQRDLG--PHHFNVLAFPCNQ 92 (181)
T ss_dssp TSEEEEEE-ECSSSTTHHHHHHHHHHHHHHHG--GGTEEEEEEECCC
T ss_pred CCEEEEEE-eccCCCCcHHHHHHHHHHHHHhh--cCCEEEEEEECcC
Confidence 45666655 56799999999999999987653 2358888888763
No 211
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=93.78 E-value=0.42 Score=36.40 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=53.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCC--CCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDF--ELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~--~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
.+++||+ |.+.+|++|-.....+.+|++.+. ...++|..+.+.++ ......+++++.+
T Consensus 33 ~~~vlv~-F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~------------------~~~~l~~~~~v~~- 92 (127)
T 3h79_A 33 EKDVFVL-YYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE------------------KYPDVIERMRVSG- 92 (127)
T ss_dssp TCEEEEE-EECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT------------------TCHHHHHHTTCCS-
T ss_pred CCCEEEE-EECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc------------------ccHhHHHhcCCcc-
Confidence 4556665 567899999999999999865321 11357777777665 1245678899988
Q ss_pred CcceEEE--cCeE----eccC-CChhhHHHHHH
Q 023845 119 FTPQLVF--QGRV----QCQG-NDQDGMLSAIA 144 (276)
Q Consensus 119 YTPq~vV--nG~~----~~~g-~~~~~~~~~i~ 144 (276)
+|++++ +|.. ...| .+.+.+...|.
T Consensus 93 -~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~ 124 (127)
T 3h79_A 93 -FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVF 124 (127)
T ss_dssp -SSEEEEECSSCSSSCEECCSCCCHHHHHHHHH
T ss_pred -CCEEEEEeCCCCCCceEecCCccHHHHHHHHH
Confidence 898765 4432 2223 34566666554
No 212
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=92.78 E-value=0.012 Score=45.48 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=30.8
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
++||. |.+..|+.|......|.++.+++.+..+++..+.+.+|
T Consensus 28 ~vll~-F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d 70 (143)
T 2lus_A 28 IIGFY-FSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD 70 (143)
Confidence 55554 55689999999999999988765222346767777666
No 213
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=93.67 E-value=0.11 Score=45.48 Aligned_cols=104 Identities=12% Similarity=0.203 Sum_probs=62.6
Q ss_pred CceEEEEecCCCCCCCHHHHHH-HHHhcccCCCCCCCEEEEEEeee--------------------cccC--------CC
Q 023845 42 GAVLVELFSSQGCKTSPEAEIL-VSRLGRGDFELGVPVIVLAYHVD--------------------YWDY--------MG 92 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~-l~~l~~~~~~~~~~VIaLa~hVd--------------------YWDy--------lG 92 (276)
.++.|..|++-.||+|=..+.. +.+|.+++.+ .++|-..-.|+- ||++ -.
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~-~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~ 117 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYID-TGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDS 117 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTT-TTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGGG
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHccc-CCeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCHh
Confidence 4688999999999999988864 4667654421 134444333332 2321 12
Q ss_pred CCCC-CC------------------------Ccc---ccHHHHHHHHH-hCCCCCCcceEEE---cCeEeccCCC-----
Q 023845 93 WKDP-YG------------------------SSQ---WTVRQKAYVEA-LNLDTMFTPQLVF---QGRVQCQGND----- 135 (276)
Q Consensus 93 WkD~-fa------------------------~~~---~t~Rq~~Y~~~-~g~~~vYTPq~vV---nG~~~~~g~~----- 135 (276)
|.+. .. +++ ...+....++. +|+.+ ||.++| ||+...+..+
T Consensus 118 ~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~G--tPtfvv~~~nG~~~~Ga~~~~~~G 195 (226)
T 3f4s_A 118 WNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITA--VPIFFIKLNDDKSYIEHNKVKHGG 195 (226)
T ss_dssp SCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCS--SCEEEEEECCTTCCCCGGGGEEES
T ss_pred hcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCc--CCEEEEEcCCCEEeeCCCCccccc
Confidence 4211 11 111 12344566778 99988 999999 9985432234
Q ss_pred ---hhhHHHHHHcCCC
Q 023845 136 ---QDGMLSAIANAPK 148 (276)
Q Consensus 136 ---~~~~~~~i~~~~~ 148 (276)
.+.+..+|.+.+.
T Consensus 196 ~~~~e~l~~~I~~~l~ 211 (226)
T 3f4s_A 196 YKELKYFTNVIDKLYG 211 (226)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHh
Confidence 6778888876553
No 214
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=93.49 E-value=0.069 Score=45.67 Aligned_cols=105 Identities=17% Similarity=0.142 Sum_probs=61.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc-CCCCCCC---------CCCccccHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD-YMGWKDP---------YGSSQWTVRQKAY 109 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD-ylGWkD~---------fa~~~~t~Rq~~Y 109 (276)
..+++||..|.+..|+.|+..-..|.++.+++. ..+|..|++.+|--+ ..-|... +.-|-..+.....
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~--~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~ 128 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFH--ERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSI 128 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHH--HTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHH
Confidence 345777776669999999999999999887652 246778888776210 0112111 1123334444556
Q ss_pred HHHhCCC---CCCcce-EEEc--CeEecc--C-----CChhhHHHHHHcC
Q 023845 110 VEALNLD---TMFTPQ-LVFQ--GRVQCQ--G-----NDQDGMLSAIANA 146 (276)
Q Consensus 110 ~~~~g~~---~vYTPq-~vVn--G~~~~~--g-----~~~~~~~~~i~~~ 146 (276)
++.+|+. .+.+|. ++|| |+.... | .+.+++.+.|++.
T Consensus 129 ~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 129 SKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7778865 223786 6665 443332 1 2355666666543
No 215
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=93.36 E-value=0.12 Score=41.68 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=44.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.+++||-.|.+-+|+.|+..-..|.++.++. ++|-.+++.+|- .+..+.|.++++..
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~----~~v~vv~Is~d~---------------~~~~~~~~~~~~~~ 103 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM----EGVDVTVVSMDL---------------PFAQKRFCESFNIQ 103 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC----TTEEEEEEESSC---------------HHHHHHHHHHTTCC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc----CCceEEEEeCCC---------------HHHHHHHHHHcCCC
Confidence 4678888888999999999988899888754 578888887751 35678899998863
No 216
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=93.34 E-value=0.24 Score=48.62 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=60.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||+ |.+.+|++|-.....+.+|++++.+....|..+.+.+| .+......+++++.. +
T Consensus 30 ~k~vlV~-FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d----------------~d~~~~l~~~~~V~~--~ 90 (519)
T 3t58_A 30 SSAWAVE-FFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCA----------------EETNSAVCREFNIAG--F 90 (519)
T ss_dssp SSEEEEE-EECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETT----------------SGGGHHHHHHTTCCS--B
T ss_pred CCeEEEE-EECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECC----------------ccccHHHHHHcCCcc--c
Confidence 3556665 55679999999999999998876322246888888775 233467788999988 8
Q ss_pred ceEEE-c-----Ce---EeccCCChhhHHHHHHcCC
Q 023845 121 PQLVF-Q-----GR---VQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV-n-----G~---~~~~g~~~~~~~~~i~~~~ 147 (276)
|++++ + |+ ....+.+.+.+...|.+.+
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 88554 3 22 2334556777777776544
No 217
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.31 E-value=0.083 Score=44.63 Aligned_cols=68 Identities=24% Similarity=0.262 Sum_probs=46.9
Q ss_pred hcCCceEEEEecCC-CCCCCHHHHHHHHHhcccCCCC--CCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCC
Q 023845 39 RRGGAVLVELFSSQ-GCKTSPEAEILVSRLGRGDFEL--GVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNL 115 (276)
Q Consensus 39 ~~~~~vvVElFTSq-GCssCP~Ad~~l~~l~~~~~~~--~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~ 115 (276)
....+++|.+|++. .|+.|++...++.++.+..... .++|......++ .....++++|+
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~------------------~~~~l~~~~~v 79 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF------------------THKEETEKYGV 79 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT------------------TCHHHHHHTTC
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc------------------ccHHHHHHcCC
Confidence 34578999999988 7999999998888776531000 235554444332 23567899999
Q ss_pred CCCCcceEEEc
Q 023845 116 DTMFTPQLVFQ 126 (276)
Q Consensus 116 ~~vYTPq~vVn 126 (276)
++ +|++++-
T Consensus 80 ~~--~Ptl~~~ 88 (229)
T 2ywm_A 80 DR--VPTIVIE 88 (229)
T ss_dssp CB--SSEEEEE
T ss_pred Cc--CcEEEEE
Confidence 97 8998775
No 218
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=93.27 E-value=0.46 Score=39.05 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=32.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.+++|| .|.+..|+.|+..-..|.+|.+++. ..++..|++.+|
T Consensus 46 Gk~vlv-~F~atwC~~C~~~~p~l~~l~~~~~--~~~~~vi~is~d 88 (187)
T 3dwv_A 46 GSPLLI-YNVASKCGYTKGGYETATTLYNKYK--SQGFTVLAFPSN 88 (187)
T ss_dssp TSCEEE-EEECCBCSCCTTHHHHHHHHHHHHG--GGTCEEEEEEBC
T ss_pred CCEEEE-EEecCCCCCcHHHHHHHHHHHHHhh--hCCeEEEEEECc
Confidence 345555 5668899999999999999988763 235888888876
No 219
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=93.25 E-value=0.13 Score=41.25 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=44.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.++++||-.|.+-+|+.|+..-..|.++.+++ ++|..|++.+|- .+..+.|.+.++..
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~----~~v~vv~is~d~---------------~~~~~~~~~~~~~~ 98 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL----DNTVVLTVSMDL---------------PFAQKRWCGAEGLD 98 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC----TTEEEEEEESSC---------------HHHHHHHHHHHTCT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc----CCcEEEEEECCC---------------HHHHHHHHHhcCCC
Confidence 34678888887899999999888899988764 578888887751 34677889988863
No 220
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=93.24 E-value=0.019 Score=49.36 Aligned_cols=45 Identities=20% Similarity=0.125 Sum_probs=36.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||..|.+.+|+.|+..-..|.++.+++. .++|..|++.+|
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~--~~~v~vv~Is~D 112 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFN--SRNCQVIACSTD 112 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHH--TTTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH--HCCCEEEEEECC
Confidence 356888888889999999999999999988753 346888888886
No 221
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=93.13 E-value=0.053 Score=45.09 Aligned_cols=44 Identities=11% Similarity=0.093 Sum_probs=33.9
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
++++||..|.+..|+.|+..-..|.++.+++. ..++..+++.+|
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~--~~~v~vv~Is~d 76 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFH--EKGFNVIGVSID 76 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHH--HTTEEEEEEESS
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHH--HcCCEEEEEECC
Confidence 46777766658999999999999988887652 236778888877
No 222
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=92.99 E-value=0.15 Score=40.87 Aligned_cols=28 Identities=21% Similarity=0.259 Sum_probs=21.2
Q ss_pred HHHHHHHHHhCCCCCCcceEEEcCeEeccCC
Q 023845 104 VRQKAYVEALNLDTMFTPQLVFQGRVQCQGN 134 (276)
Q Consensus 104 ~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~ 134 (276)
+.|....+.-|.++ +||++|||+ +++|.
T Consensus 63 ~~r~~l~~~sg~~T--vPqIFI~g~-~IGG~ 90 (118)
T 2wul_A 63 ELRQGIKDYSNWPT--IPQVYLNGE-FVGGC 90 (118)
T ss_dssp HHHHHHHHHHTCCS--SCEEEETTE-EEECH
T ss_pred HHHHHHHHhccCCC--CCeEeECCE-EECCH
Confidence 56666667778787 899999996 55664
No 223
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=92.96 E-value=0.099 Score=44.81 Aligned_cols=45 Identities=20% Similarity=0.128 Sum_probs=34.7
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
.+++||..|-+..|+.|+..-..|.++.+++. ..+|..|++.+|-
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~--~~~v~vv~Is~D~ 100 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFH--DVNCEVVAVSVDS 100 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHH--HTTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEECCC
Confidence 36777766659999999999889998887652 2478888888873
No 224
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=92.92 E-value=0.11 Score=45.00 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=52.9
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcc
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTP 121 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTP 121 (276)
.+|||. |.+.+|++|-.....|.+|++++ ++|..+.++++ + ......+++.. +|
T Consensus 121 k~vvV~-F~a~wC~~C~~l~p~l~~la~~~----~~v~f~~vd~~--~-----------------~~l~~~~~i~~--~P 174 (217)
T 2trc_P 121 TTIVVN-IYEDGVRGCDALNSSLECLAAEY----PMVKFCKIRAS--N-----------------TGAGDRFSSDV--LP 174 (217)
T ss_dssp CEEEEE-EECTTSTTHHHHHHHHHHHHTTC----TTSEEEEEEHH--H-----------------HTCSTTSCGGG--CS
T ss_pred cEEEEE-EECCCCccHHHHHHHHHHHHHHC----CCeEEEEEECC--c-----------------HHHHHHCCCCC--CC
Confidence 456665 55899999999999999999875 47777777775 2 11223456666 88
Q ss_pred eEEE--cCeEe--ccCCCh--------hhHHHHHHcC
Q 023845 122 QLVF--QGRVQ--CQGNDQ--------DGMLSAIANA 146 (276)
Q Consensus 122 q~vV--nG~~~--~~g~~~--------~~~~~~i~~~ 146 (276)
++++ ||+.. ..|... +.+...|.+.
T Consensus 175 Tl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 175 TLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 8655 78654 244332 5566666653
No 225
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=92.70 E-value=0.066 Score=42.58 Aligned_cols=60 Identities=7% Similarity=0.035 Sum_probs=44.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||..|.+-+|+.|+..-..|.++.+++. ..++..+++.+| -.+..+.|.+.++..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~--~~~~~vv~vs~d---------------~~~~~~~~~~~~~~~ 93 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFD--KAGAKILGVSRD---------------SVKSHDNFCAKQGFA 93 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHH--HTTCEEEEEESS---------------CHHHHHHHHHHHCCS
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHH--HCCCEEEEEeCC---------------CHHHHHHHHHHhCCC
Confidence 345788887777999999999888988887653 235777777775 146678889888754
No 226
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=91.86 E-value=0.021 Score=45.29 Aligned_cols=44 Identities=11% Similarity=0.233 Sum_probs=30.3
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHH-hcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSR-LGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~-l~~~~~~~~~~VIaLa~hVd 86 (276)
++++||. |.+.+|+.|......|.+ +..++. ..+++..+++.+|
T Consensus 33 gk~vll~-f~a~~C~~C~~~~~~l~~~l~~~~~-~~~~~~vv~v~~d 77 (159)
T 2ls5_A 33 GKVVMLQ-FTASWCGVCRKEMPFIEKDIWLKHK-DNADFALIGIDRD 77 (159)
Confidence 4566665 558899999988888887 766542 1246767776665
No 227
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=92.60 E-value=0.27 Score=40.48 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=32.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||. |....|+.|+..-..|.++.+++. ..+|..+++.+|
T Consensus 47 ~Gk~vll~-F~atwC~~C~~~~~~l~~l~~~~~--~~~v~vv~vs~d 90 (190)
T 2vup_A 47 KGSPLLIY-NVASKCGYTKGGYETATTLYNKYK--SQGFTVLAFPCN 90 (190)
T ss_dssp TTSCEEEE-EECSSSTTHHHHHHHHHHHHHHHG--GGTCEEEEEECC
T ss_pred CCCEEEEE-EecCCCCccHHHHHHHHHHHHHHh--cCCeEEEEEEcC
Confidence 34566665 557899999999999999887653 235777888776
No 228
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=92.46 E-value=0.12 Score=41.16 Aligned_cols=66 Identities=17% Similarity=0.152 Sum_probs=50.9
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHH--HHHHHHhCCC-CCC
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQ--KAYVEALNLD-TMF 119 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq--~~Y~~~~g~~-~vY 119 (276)
..+|=+|.|..|+.|-.+...+.++.++ +++-..-+.|| ..|. ..-+.++|++ .
T Consensus 25 ~~vvi~khatwCgpc~~~~~~~e~~~~~-----~~v~~~~vdVd----------------e~r~~Sn~IA~~~~V~h~-- 81 (112)
T 3iv4_A 25 KYVFVLKHSETCPISANAYDQFNKFLYE-----RDMDGYYLIVQ----------------QERDLSDYIAKKTNVKHE-- 81 (112)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHH-----HTCCEEEEEGG----------------GGHHHHHHHHHHHTCCCC--
T ss_pred CCEEEEEECCcCHhHHHHHHHHHHHhcc-----CCceEEEEEee----------------cCchhhHHHHHHhCCccC--
Confidence 4566789999999999999999999873 36666666776 5555 5689999998 6
Q ss_pred cceEEE--cCeEec
Q 023845 120 TPQLVF--QGRVQC 131 (276)
Q Consensus 120 TPq~vV--nG~~~~ 131 (276)
.||+++ ||+...
T Consensus 82 sPq~il~k~G~~v~ 95 (112)
T 3iv4_A 82 SPQAFYFVNGEMVW 95 (112)
T ss_dssp SSEEEEEETTEEEE
T ss_pred CCeEEEEECCEEEE
Confidence 788655 786654
No 229
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=92.43 E-value=0.28 Score=46.65 Aligned_cols=87 Identities=11% Similarity=0.161 Sum_probs=59.8
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCC
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTM 118 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~v 118 (276)
...+++||+ |.+.+|++|-.....+.++++... ..+|....++.+- .....+++|+.+
T Consensus 29 ~~~~~~lv~-F~a~wC~~C~~~~p~~~~~a~~~~--~~~v~~~~vd~~~------------------~~~l~~~~~v~~- 86 (504)
T 2b5e_A 29 QSHDLVLAE-FFAPWCGHCKNMAPEYVKAAETLV--EKNITLAQIDCTE------------------NQDLCMEHNIPG- 86 (504)
T ss_dssp TTCSEEEEE-EECTTCHHHHHHHHHHHHHHHHTT--TTTCEEEEEETTT------------------CHHHHHHTTCCS-
T ss_pred hcCCeEEEE-EECCCCHHHHHhHHHHHHHHHHhc--cCCeEEEEEECCC------------------CHHHHHhcCCCc-
Confidence 345566665 556899999999999999988652 1147776666541 145788899988
Q ss_pred CcceEEE--cCeE----eccC-CChhhHHHHHHcCCC
Q 023845 119 FTPQLVF--QGRV----QCQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 119 YTPq~vV--nG~~----~~~g-~~~~~~~~~i~~~~~ 148 (276)
+|++++ +|+. ...| .+.+.+...|.+...
T Consensus 87 -~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 87 -FPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQ 122 (504)
T ss_dssp -SSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTS
T ss_pred -CCEEEEEeCCccccceeecCCCCHHHHHHHHHHhcC
Confidence 888665 7763 2334 457778888877653
No 230
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=92.32 E-value=0.28 Score=41.39 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=35.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||-.|.+-+|+.|+..-..|.++.+++ ++|..+++.+|
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~----~~v~vv~Is~D 119 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL----ENTVVLCISSD 119 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS----TTEEEEEEESS
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh----CCCEEEEEECC
Confidence 34678888888999999999999999998764 46777777776
No 231
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=92.25 E-value=0.22 Score=41.11 Aligned_cols=85 Identities=12% Similarity=0.108 Sum_probs=53.9
Q ss_pred hhhcCCceEEEEecCCCCCCCHHHHHHH------HHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHH
Q 023845 37 EMRRGGAVLVELFSSQGCKTSPEAEILV------SRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYV 110 (276)
Q Consensus 37 ~~~~~~~vvVElFTSqGCssCP~Ad~~l------~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~ 110 (276)
+...+++++|.++. .+|.+|-.-++.+ .++.+ .+.|.+.+.++ +.-.+.|.
T Consensus 38 Ak~~~K~vlvd~~a-~wC~~C~~me~~vf~d~~V~~~l~------~~fv~v~~d~~----------------~~~~~~l~ 94 (153)
T 2dlx_A 38 GQMQNKWLMINIQN-VQDFACQCLNRDVWSNEAVKNIIR------EHFIFWQVYHD----------------SEEGQRYI 94 (153)
T ss_dssp HHHHTCEEEEEEEC-SCTTTHHHHHHHTTTCHHHHHHHH------HTEEEEEEESS----------------SHHHHHHH
T ss_pred HHHcCCeEEEEEEC-CCCHhHHHHHHHhcCCHHHHHHHH------cCeEEEEEecC----------------CHhHHHHH
Confidence 34456777776555 6999998775433 33322 27888777664 35567889
Q ss_pred HHhCCCCCCcceEE-Ec---CeEe--ccCCChhhHHHHHHcC
Q 023845 111 EALNLDTMFTPQLV-FQ---GRVQ--CQGNDQDGMLSAIANA 146 (276)
Q Consensus 111 ~~~g~~~vYTPq~v-Vn---G~~~--~~g~~~~~~~~~i~~~ 146 (276)
+++++.. +|.++ +| |+.. ..|-+.+.+...|++.
T Consensus 95 ~~y~v~~--~P~~~fld~~~G~~l~~~~g~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 95 QFYKLGD--FPYVSILDPRTGQKLVEWHQLDVSSFLDQVTGF 134 (153)
T ss_dssp HHHTCCS--SSEEEEECTTTCCCCEEESSCCHHHHHHHHHHH
T ss_pred HHcCCCC--CCEEEEEeCCCCcEeeecCCCCHHHHHHHHHHH
Confidence 9999876 89954 44 3221 3455677766666543
No 232
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=92.24 E-value=0.55 Score=36.95 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=44.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHH-HHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAY-VEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y-~~~~g~~ 116 (276)
.++++||..| +..|+.|+..-..|.++.+++. ..++..+++++|-++. ..+.-.+..+.| .+.++..
T Consensus 30 ~gk~vlv~f~-a~~C~~C~~~~~~l~~l~~~~~--~~~~~vv~v~~d~~~~-------~~~~~~~~~~~~~~~~~~~~ 97 (169)
T 2v1m_A 30 RGHVCLIVNV-ACKCGATDKNYRQLQEMHTRLV--GKGLRILAFPCNQFGG-------QEPWAEAEIKKFVTEKYGVQ 97 (169)
T ss_dssp TTSEEEEEEE-CSSSTTHHHHHHHHHHHHHHHG--GGTEEEEEEECCCSTT-------CCCSCHHHHHHHHHHHHCCC
T ss_pred CCCEEEEEEe-eccCCchHHHHHHHHHHHHHhh--cCCeEEEEEECCccCC-------CCCCCHHHHHHHHHHhcCCC
Confidence 3456777555 5799999999999999887653 2368888888873211 011123556778 5777764
No 233
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=92.19 E-value=0.13 Score=42.85 Aligned_cols=41 Identities=5% Similarity=-0.117 Sum_probs=31.6
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..++|-.|+..+|+.|......|.+|++++ +++..+.+.+|
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~----~~v~~~~v~~d 94 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQ----PNIELAIISKG 94 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHC----TTEEEEEECHH
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHC----CCcEEEEEECC
Confidence 345555599999999999999999998764 46666666665
No 234
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=92.19 E-value=0.099 Score=44.14 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=30.1
Q ss_pred ceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeec
Q 023845 43 AVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
+.|| .|.+-.||+|-..+..| .+|.+++ .++|...-+|+.+
T Consensus 23 ~~vv-ef~d~~Cp~C~~~~~~l~~~~~l~~~~---~~~v~~~~~~~~~ 66 (191)
T 3l9s_A 23 PQVL-EFFSFYCPHCYQFEEVLHVSDNVKKKL---PEGTKMTKYHVEF 66 (191)
T ss_dssp SCEE-EEECTTCHHHHHHHHTSCHHHHHHHHS---CTTCCEEEEECSS
T ss_pred CeEE-EEECCCChhHHHhChhccchHHHHHhC---CCCcEEEEEeccc
Confidence 4444 68899999999999876 5787765 2356666677765
No 235
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=92.06 E-value=0.12 Score=44.08 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=44.2
Q ss_pred eEEEEecC-------CCCCCCHHHHHHHHHhcccCCC--CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhC
Q 023845 44 VLVELFSS-------QGCKTSPEAEILVSRLGRGDFE--LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALN 114 (276)
Q Consensus 44 vvVElFTS-------qGCssCP~Ad~~l~~l~~~~~~--~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g 114 (276)
.||.+||. .+|..|-.....+++|++++.. ..++|......+| .....+.++|
T Consensus 39 ~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d------------------~~~~la~~~~ 100 (178)
T 3ga4_A 39 FNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN------------------EVPQLVKDLK 100 (178)
T ss_dssp EEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT------------------TCHHHHHHTT
T ss_pred cEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc------------------cCHHHHHHcC
Confidence 46667777 4999999999999999986410 0146666665554 2456789999
Q ss_pred CCCCCcceEEE
Q 023845 115 LDTMFTPQLVF 125 (276)
Q Consensus 115 ~~~vYTPq~vV 125 (276)
+++ .|++++
T Consensus 101 I~s--iPtl~~ 109 (178)
T 3ga4_A 101 LQN--VPHLVV 109 (178)
T ss_dssp CCS--SCEEEE
T ss_pred CCC--CCEEEE
Confidence 999 777554
No 236
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=92.00 E-value=0.23 Score=42.28 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=60.5
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc-CCCCCCCC---------CCccccHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD-YMGWKDPY---------GSSQWTVRQKAYV 110 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD-ylGWkD~f---------a~~~~t~Rq~~Y~ 110 (276)
.+++||-.|.+-.|+.|+..-..|.++.+++. ..+|..|++.+|--+ ..-|.+.+ .-|-..+.....+
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~--~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 125 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR--SINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS 125 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHH--TTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH
Confidence 45777776669999999998888888877653 246777777776211 11122221 1233344445667
Q ss_pred HHhCCC----CCCcce-EEEc--CeEecc--C-----CChhhHHHHHHc
Q 023845 111 EALNLD----TMFTPQ-LVFQ--GRVQCQ--G-----NDQDGMLSAIAN 145 (276)
Q Consensus 111 ~~~g~~----~vYTPq-~vVn--G~~~~~--g-----~~~~~~~~~i~~ 145 (276)
+.||+. ...+|. ++|| |+.... | .+.+++.+.|++
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~ 174 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 174 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 778863 124787 5665 554332 1 234556666654
No 237
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=91.50 E-value=0.23 Score=39.91 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=43.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|.+-+|+.|+..-..|.++.++ .++..|++..|- .+.++.|.+.++..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-----~~~~vv~is~d~---------------~~~~~~~~~~~~~~ 101 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-----EEGIVLTISADL---------------PFAQKRWCASAGLD 101 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-----TTSEEEEEESSC---------------HHHHHHHHHHHTCS
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-----CCCEEEEEECCC---------------HHHHHHHHHHcCCC
Confidence 3568899888899999999999999998774 356666666541 45678899998863
No 238
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=91.39 E-value=0.14 Score=40.78 Aligned_cols=56 Identities=20% Similarity=0.118 Sum_probs=39.0
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
++||-.|.+-.|+.|+..-..|.++.+++.+.. .||++ .+| + .+..+.|.+.++..
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~i--s~d------------~---~~~~~~~~~~~~~~ 92 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGL--SAD------------S---VTSQKKFQSKQNLP 92 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEE--ESC------------C---HHHHHHHHHHHTCS
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEE--eCC------------C---HHHHHHHHHHhCCC
Confidence 577777789999999988888888876653223 45544 454 1 34667888888853
No 239
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=91.22 E-value=0.19 Score=41.37 Aligned_cols=60 Identities=8% Similarity=0.054 Sum_probs=44.9
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|..-+|+.|+..-..|.++.+++. ..++..+++.+|- .+.++.|.+.++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~--~~~~~vv~Vs~D~---------------~~~~~~~~~~~~~~ 109 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFE--QINATVLGVSRDS---------------VKSHDSFCAKQGFT 109 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHH--TTTEEEEEEESCC---------------HHHHHHHHHHHTCC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHH--HCCCEEEEEcCCC---------------HHHHHHHHHHcCCc
Confidence 345788888889999999998888888877653 3467777776651 35678889988864
No 240
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=90.94 E-value=0.4 Score=46.83 Aligned_cols=63 Identities=14% Similarity=0.172 Sum_probs=45.2
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCC-----CCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELG-----VPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~-----~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
+++||+. ++.+|++|-.....+.+|++++.... ++|..+.+.+|- ....++++++.
T Consensus 43 k~VlV~F-yA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~------------------~~~la~~y~V~ 103 (470)
T 3qcp_A 43 CPWIVLF-YNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS------------------EVDLCRKYDIN 103 (470)
T ss_dssp SCEEEEE-ECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT------------------CHHHHHHTTCC
T ss_pred CeEEEEE-ECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC------------------CHHHHHHcCCC
Confidence 4566655 56799999999999999998763111 147777777651 24678889998
Q ss_pred CCCcceEEE
Q 023845 117 TMFTPQLVF 125 (276)
Q Consensus 117 ~vYTPq~vV 125 (276)
. +|++++
T Consensus 104 ~--~PTlil 110 (470)
T 3qcp_A 104 F--VPRLFF 110 (470)
T ss_dssp S--SCEEEE
T ss_pred c--cCeEEE
Confidence 8 888654
No 241
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=90.89 E-value=0.16 Score=51.18 Aligned_cols=86 Identities=12% Similarity=-0.005 Sum_probs=60.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.++++||. |.+.+|++|......|.+|++++ .++|..+.+.++- ....++.+++.+
T Consensus 674 ~~~~v~v~-F~a~wC~~C~~~~p~~~~la~~~---~~~~~~~~vd~~~------------------~~~~~~~~~v~~-- 729 (780)
T 3apo_A 674 GKTHWVVD-FYAPWSGPSQNFAPEFELLARMI---KGKVRAGKVDCQA------------------YPQTCQKAGIKA-- 729 (780)
T ss_dssp CSSCEEEE-EECTTCHHHHHHHHHHHHHHHHH---TTTCEEEEEETTT------------------CHHHHHHTTCCS--
T ss_pred CCCeEEEE-EECCCCHHHHHHHHHHHHHHHHh---cCCceEEEEECCC------------------CHHHHHhcCCCc--
Confidence 34566665 55789999999999999999875 3467777766641 134677899988
Q ss_pred cceEEE--cCeEe--ccC-----CChhhHHHHHHcCCCC
Q 023845 120 TPQLVF--QGRVQ--CQG-----NDQDGMLSAIANAPKF 149 (276)
Q Consensus 120 TPq~vV--nG~~~--~~g-----~~~~~~~~~i~~~~~~ 149 (276)
+|++++ +|+.. ..| .+.+.+...|.+.++.
T Consensus 730 ~Pt~~~~~~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 730 YPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp SSEEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred CCEEEEEcCCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 899776 55432 233 3678888888877643
No 242
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=90.68 E-value=0.19 Score=41.62 Aligned_cols=56 Identities=16% Similarity=0.012 Sum_probs=42.4
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL 113 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~ 113 (276)
.+++||-.|.+-.|+.|+.--..|.++.+++. ..+|..|++.+|- .+..++|.+.+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~--~~~v~vv~Is~d~---------------~~~~~~~~~~~ 85 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQ--KLGVDVYSVSTDT---------------HFTHKAWHSSS 85 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHH--HTTEEEEEEESSC---------------HHHHHHHHHHC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHH--HCCCEEEEEECCC---------------HHHHHHHHHHc
Confidence 46888888888999999988888888876542 2467888887761 34567888887
No 243
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=90.49 E-value=0.041 Score=45.05 Aligned_cols=31 Identities=10% Similarity=0.108 Sum_probs=23.5
Q ss_pred hhcCCceEEEEecCCCCCCCHHHHHHHHHhcc
Q 023845 38 MRRGGAVLVELFSSQGCKTSPEAEILVSRLGR 69 (276)
Q Consensus 38 ~~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~ 69 (276)
...++++||.. .+.+|+.|-.....|.++.+
T Consensus 43 ~~~~k~vlv~F-~a~WC~~C~~~~p~l~~~~~ 73 (164)
T 1sen_A 43 AASGLPLMVII-HKSWCGACKALKPKFAESTE 73 (164)
T ss_dssp HHHTCCEEEEE-ECTTCHHHHHHHHHHHTCHH
T ss_pred HhcCCeEEEEE-ECCCCHHHHHHHHHHHHHHH
Confidence 34456777755 57999999999999888764
No 244
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=90.41 E-value=0.64 Score=38.04 Aligned_cols=64 Identities=13% Similarity=0.110 Sum_probs=45.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCc--cccHHHHHHHHHhCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSS--QWTVRQKAYVEALNLD 116 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~--~~t~Rq~~Y~~~~g~~ 116 (276)
.+++|| .|.+..|+.|+..-..|.++.+++. ..++..+++.+|- |..+ .-.+..+.|.+.+++.
T Consensus 49 Gk~vlv-~F~atwC~~C~~~~~~l~~l~~~~~--~~~v~vv~is~d~---------~~~~~~~~~~~~~~~~~~~~~~ 114 (185)
T 2gs3_A 49 GFVCIV-TNVASQGGKTEVNYTQLVDLHARYA--ECGLRILAFPCNQ---------FGKQEPGSNEEIKEFAAGYNVK 114 (185)
T ss_dssp TSEEEE-EEECSSSTTHHHHHHHHHHHHHHHG--GGTEEEEEEECCT---------TTTCCCSCHHHHHHHHHHTTCC
T ss_pred CCEEEE-EEecCCCCchHHHHHHHHHHHHHhh--cCCeEEEEEECcc---------cCCCCCCCHHHHHHHHHHcCCC
Confidence 456666 5567899999998889999887653 2368888888863 2222 1245678889988865
No 245
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=90.39 E-value=0.37 Score=37.76 Aligned_cols=64 Identities=16% Similarity=0.102 Sum_probs=43.8
Q ss_pred CCceEEEEecCCCCCC-CHHHHHHHHHhcccCCC--CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 41 GGAVLVELFSSQGCKT-SPEAEILVSRLGRGDFE--LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 41 ~~~vvVElFTSqGCss-CP~Ad~~l~~l~~~~~~--~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
++++||. |....|+. |+..-..|.++.+++.. ..++|..+++.+|. .....+..+.|.+.++..
T Consensus 23 gk~vll~-f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~-----------~~d~~~~~~~~~~~~~~~ 89 (164)
T 2ggt_A 23 GQWLLIY-FGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP-----------ERDTKEAIANYVKEFSPK 89 (164)
T ss_dssp TCEEEEE-EECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT-----------TTCCHHHHHHHHHTTCSS
T ss_pred CCEEEEE-EEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC-----------CCCCHHHHHHHHHHcCCC
Confidence 4566665 55679998 99999999888775421 01478888888872 112245678888888743
No 246
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=90.39 E-value=0.27 Score=40.28 Aligned_cols=66 Identities=20% Similarity=0.285 Sum_probs=46.0
Q ss_pred cCCceEEEEecCCCCC-CCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCC
Q 023845 40 RGGAVLVELFSSQGCK-TSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDT 117 (276)
Q Consensus 40 ~~~~vvVElFTSqGCs-sCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~ 117 (276)
.++++||-. ---.|+ .||..-..|.+|.+...+...+|..|++-||.. +| --++.+.|++.++...
T Consensus 31 ~Gk~vll~F-~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~-----~D------tp~~l~~y~~~~~~~~ 97 (170)
T 4hde_A 31 KGKVWVADF-MFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPD-----LD------KPENLKAFIQKFTEDT 97 (170)
T ss_dssp TTSCEEEEE-ECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT-----TC------CHHHHHHHHTTTCSCC
T ss_pred CCCEEEEEE-ECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcc-----cc------cHHHHHHHHHHcCCCC
Confidence 345666655 455797 599998888888765433356899999999842 22 2467789999988654
No 247
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=90.16 E-value=0.88 Score=36.90 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=45.7
Q ss_pred CCceEEEEecCCCCCC-CHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCC
Q 023845 41 GGAVLVELFSSQGCKT-SPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDT 117 (276)
Q Consensus 41 ~~~vvVElFTSqGCss-CP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~ 117 (276)
.+++|| .|..-.|+. ||..-..|.++.++......++..|++.+|.- +..+..+.|.+.++...
T Consensus 28 Gk~vll-~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~------------d~~~~~~~~~~~~~~~~ 92 (170)
T 3me7_A 28 GKPIIL-SPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPK------------DTLEDIKRFQKEYGIDG 92 (170)
T ss_dssp TSCEEE-EEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTT------------CCHHHHHHHHHHTTCCS
T ss_pred CCEEEE-EEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCC------------CCHHHHHHHHHHcCCCC
Confidence 445555 566779985 99999999988876532235788888888731 23567788999988665
No 248
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=90.08 E-value=0.25 Score=38.78 Aligned_cols=77 Identities=12% Similarity=0.081 Sum_probs=52.0
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcc
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTP 121 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTP 121 (276)
+++|| .|.+.+|++|-.....|.+|++++ ++|..+.+.++- . + +.+++.. +|
T Consensus 31 ~~vvv-~f~a~wC~~C~~~~p~l~~la~~~----~~v~~~~vd~~~---------~--~----------~~~~i~~--~P 82 (135)
T 2dbc_A 31 LWVVI-HLYRSSVPMCLVVNQHLSVLARKF----PETKFVKAIVNS---------C--I----------EHYHDNC--LP 82 (135)
T ss_dssp CEEEE-EECCTTCHHHHHHHHHHHHHHHHC----SSEEEEEECCSS---------S--C----------SSCCSSC--CS
T ss_pred CEEEE-EEECCCChHHHHHHHHHHHHHHHC----CCcEEEEEEhhc---------C--c----------ccCCCCC--CC
Confidence 34555 566789999999999999999875 467777766652 1 1 3577777 88
Q ss_pred eEEE--cCeEe--ccCC--------ChhhHHHHHHcC
Q 023845 122 QLVF--QGRVQ--CQGN--------DQDGMLSAIANA 146 (276)
Q Consensus 122 q~vV--nG~~~--~~g~--------~~~~~~~~i~~~ 146 (276)
++++ ||+.. ..|. +.+.+...|.+.
T Consensus 83 t~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 83 TIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 8665 66542 2333 356677777654
No 249
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=89.85 E-value=0.51 Score=43.52 Aligned_cols=88 Identities=15% Similarity=0.205 Sum_probs=58.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCC---CCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFEL---GVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~---~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||+ |.+.+|++|-.....+.++++..... ..+|.....+.+ .....++++++.
T Consensus 21 ~~~~vlV~-F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~------------------~~~~l~~~~~v~ 81 (382)
T 2r2j_A 21 NADVALVN-FYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD------------------QHSDIAQRYRIS 81 (382)
T ss_dssp HCSEEEEE-EECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT------------------TCHHHHHHTTCC
T ss_pred cCCeEEEE-EECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC------------------ccHHHHHhcCCC
Confidence 34567775 56789999988888888887643111 124666665544 225578889998
Q ss_pred CCCcceEEE--cCeEe---ccC-CChhhHHHHHHcCCC
Q 023845 117 TMFTPQLVF--QGRVQ---CQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 117 ~vYTPq~vV--nG~~~---~~g-~~~~~~~~~i~~~~~ 148 (276)
. +|++++ ||+.. ..| .+.+.+...|.+...
T Consensus 82 ~--~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (382)
T 2r2j_A 82 K--YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKS 117 (382)
T ss_dssp E--ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHS
T ss_pred c--CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhcc
Confidence 8 888776 78753 344 357778888876553
No 250
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=89.45 E-value=0.32 Score=40.60 Aligned_cols=40 Identities=20% Similarity=0.373 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCCCcceEEEcCeEec--cCC-ChhhHHHHHHcC
Q 023845 105 RQKAYVEALNLDTMFTPQLVFQGRVQC--QGN-DQDGMLSAIANA 146 (276)
Q Consensus 105 Rq~~Y~~~~g~~~vYTPq~vVnG~~~~--~g~-~~~~~~~~i~~~ 146 (276)
+....++.+|+++ ||.+||||+..+ .|. +.+.+.+.|+..
T Consensus 140 ~~~~~a~~~gv~G--tPtfvvng~~~v~~~Ga~~~e~~~~~i~~l 182 (185)
T 3feu_A 140 NAKMLSEKSGISS--VPTFVVNGKYNVLIGGHDDPKQIADTIRYL 182 (185)
T ss_dssp HHHHHHHHHTCCS--SSEEEETTTEEECGGGCSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCc--cCEEEECCEEEEecCCCCCHHHHHHHHHHH
Confidence 3445567778887 999999999765 454 567777777653
No 251
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=89.12 E-value=1.9 Score=38.00 Aligned_cols=88 Identities=18% Similarity=0.240 Sum_probs=56.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC--C
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD--T 117 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~--~ 117 (276)
..+++||+.|+ .||.|| -...+.+|+..+.. .++|....+.+| || + ........++++++ +
T Consensus 21 ~~~~vlV~FyA--~~pWCg-l~P~~e~lA~~~~~-~~~v~~akVDvd--~~-------g----~~~~~~l~~~~~V~~~~ 83 (240)
T 2qc7_A 21 KSKFVLVKFDT--QYPYGE-KQDEFKRLAENSAS-SDDLLVAEVGIS--DY-------G----DKLNMELSEKYKLDKES 83 (240)
T ss_dssp GCSEEEEEECC--SSCCSH-HHHHHHHHHHHHTT-CTTEEEEEECCC--CS-------S----SCCSHHHHHHTTCCGGG
T ss_pred CCCCEEEEEeC--CCCCCc-chHHHHHHHHHhcC-CCCeEEEEEeCC--cc-------c----chhhHHHHHHcCCCCCC
Confidence 34678888776 367777 77777777765421 357888777765 10 0 01124578889999 7
Q ss_pred CCcceEEE--cCe----EeccC-CChhhHHHHHHcC
Q 023845 118 MFTPQLVF--QGR----VQCQG-NDQDGMLSAIANA 146 (276)
Q Consensus 118 vYTPq~vV--nG~----~~~~g-~~~~~~~~~i~~~ 146 (276)
.|++++ +|+ ....| .+.+.+...|.+.
T Consensus 84 --~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 84 --YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp --CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred --CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 677554 887 23334 4577888888876
No 252
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=89.02 E-value=0.6 Score=36.89 Aligned_cols=63 Identities=21% Similarity=0.158 Sum_probs=42.8
Q ss_pred CCceEEEEecCCCCCC-CHHHHHHHHHhcccCCC--CCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCC
Q 023845 41 GGAVLVELFSSQGCKT-SPEAEILVSRLGRGDFE--LGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNL 115 (276)
Q Consensus 41 ~~~vvVElFTSqGCss-CP~Ad~~l~~l~~~~~~--~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~ 115 (276)
++++|| .|....|+. |+..-..|.++.+++.+ ..++|..+++.+|. .....+..+.|.+.++.
T Consensus 26 gk~vll-~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~-----------~~d~~~~~~~~~~~~~~ 91 (171)
T 2rli_A 26 GQWVLM-YFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP-----------ERDDVEAMARYVQDFHP 91 (171)
T ss_dssp TSEEEE-EEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS-----------TTCCHHHHHHHHHTTCT
T ss_pred CCEEEE-EEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC-----------CCCCHHHHHHHHHHcCC
Confidence 455666 666889998 99999999888876421 12578888888873 11124566777777764
No 253
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=88.94 E-value=0.16 Score=39.89 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=44.3
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
+||| .|.+.+|+.|-..+..|.+|++++ +++.-+...+|- . +.++++++ +|+
T Consensus 25 ~vvv-~F~a~wc~~C~~~~p~l~~la~~~----~~v~f~kvd~d~---------~------------~~~~~v~~--~PT 76 (118)
T 3evi_A 25 WVII-HLYRSSIPMCLLVNQHLSLLARKF----PETKFVKAIVNS---------C------------IQHYHDNC--LPT 76 (118)
T ss_dssp EEEE-EEECTTSHHHHHHHHHHHHHHHHC----TTSEEEEEEGGG---------T------------STTCCGGG--CSE
T ss_pred eEEE-EEeCCCChHHHHHHHHHHHHHHHC----CCCEEEEEEhHH---------h------------HHHCCCCC--CCE
Confidence 5555 567899999999999999999875 467777777762 0 25678888 676
Q ss_pred E--EEcCeEe
Q 023845 123 L--VFQGRVQ 130 (276)
Q Consensus 123 ~--vVnG~~~ 130 (276)
+ +-||+..
T Consensus 77 ~~~fk~G~~v 86 (118)
T 3evi_A 77 IFVYKNGQIE 86 (118)
T ss_dssp EEEEETTEEE
T ss_pred EEEEECCEEE
Confidence 4 4588654
No 254
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=88.62 E-value=0.33 Score=39.03 Aligned_cols=101 Identities=9% Similarity=0.111 Sum_probs=49.0
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeeecccCCCCC-----C--CCCCccccHHHHH
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVDYWDYMGWK-----D--PYGSSQWTVRQKA 108 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVdYWDylGWk-----D--~fa~~~~t~Rq~~ 108 (276)
..++++||..| ..+|+.|=..+..+ .++.+.. .++++.+.+.+|--+.+... + ........++...
T Consensus 45 ~~gk~vlv~F~-A~WC~~C~~~~~~~~~~~~~~~~~---~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (172)
T 3f9u_A 45 QHNKPVMLDFT-GYGCVNCRKMELAVWTDPKVSSII---NNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSY 120 (172)
T ss_dssp HTTCCEEEEEE-CTTCHHHHHHHHHTTTSHHHHHHH---HHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHH
T ss_pred HcCCeEEEEEE-CCCCHHHHHHHHHhcCCHHHHHHh---cCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhH
Confidence 34567777655 55999997642222 3333322 22677777777521100000 0 0000011222222
Q ss_pred H-HHHhCCCCCCcceE-EE--cCeEec--cCC-C-hhhHHHHHHc
Q 023845 109 Y-VEALNLDTMFTPQL-VF--QGRVQC--QGN-D-QDGMLSAIAN 145 (276)
Q Consensus 109 Y-~~~~g~~~vYTPq~-vV--nG~~~~--~g~-~-~~~~~~~i~~ 145 (276)
. .+.+++.. +|++ +| +|+... .|. + .+.+...|.+
T Consensus 121 ~~~~~~~v~~--~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 121 LQRVKFGANA--QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHHHSCCC--SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHHHcCCCC--cceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 2 47788887 9995 45 465432 232 3 5555555554
No 255
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=87.97 E-value=0.28 Score=43.61 Aligned_cols=81 Identities=12% Similarity=0.033 Sum_probs=53.4
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
.++||| .|.+.+|++|-.....|.+|++++ ++|..+.++++- ......+++.. +
T Consensus 133 ~k~VvV-~Fya~wC~~Ck~l~p~l~~La~~~----~~v~f~kVd~d~-------------------~~l~~~~~I~~--~ 186 (245)
T 1a0r_P 133 ITTIVV-HIYEDGIKGCDALNSSLICLAAEY----PMVKFCKIKASN-------------------TGAGDRFSSDV--L 186 (245)
T ss_dssp TCEEEE-EEECTTSTTHHHHHHHHHHHHHHC----TTSEEEEEEHHH-------------------HCCTTSSCTTT--C
T ss_pred CCEEEE-EEECCCChHHHHHHHHHHHHHHHC----CCCEEEEEeCCc-------------------HHHHHHCCCCC--C
Confidence 345555 555789999999999999999875 357777776651 11334577777 7
Q ss_pred ceEEE--cCeEe--ccCC--------ChhhHHHHHHcCC
Q 023845 121 PQLVF--QGRVQ--CQGN--------DQDGMLSAIANAP 147 (276)
Q Consensus 121 Pq~vV--nG~~~--~~g~--------~~~~~~~~i~~~~ 147 (276)
|+++| ||+.. ++|. ....+...|.+..
T Consensus 187 PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 187 PTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp SEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred CEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 88665 78653 2332 1345777777654
No 256
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=87.92 E-value=0.6 Score=37.49 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=33.7
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||-.|.+-+|+.|+..-..|.++.+++ +++..|++.+|
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~----~~v~vv~Is~d 84 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL----SNTIVLCISAD 84 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS----TTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc----CCCEEEEEeCC
Confidence 34678888888999999998888888887754 46777777765
No 257
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=87.78 E-value=1.1 Score=36.42 Aligned_cols=64 Identities=14% Similarity=0.194 Sum_probs=44.4
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCcc--ccHHHHHHHHHhCCC
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQ--WTVRQKAYVEALNLD 116 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~--~t~Rq~~Y~~~~g~~ 116 (276)
.+++|| .|.+..|+.|+..-..|.+|.+++. ..+|..+++.+|- |..++ -.+..+.|.+.++..
T Consensus 47 gk~vll-~F~atwC~~C~~~~~~l~~l~~~~~--~~~v~vv~vs~d~---------~~~~e~~~~~~~~~~~~~~~~~ 112 (183)
T 2obi_A 47 GFVCIV-TNVASQCGKTEVNYTQLVDLHARYA--ECGLRILAFPCNQ---------FGKQEPGSNEEIKEFAAGYNVK 112 (183)
T ss_dssp TSEEEE-EEECSSSTTHHHHHHHHHHHHHHHG--GGTEEEEEEECCC---------STTCCCSCHHHHHHHHHTTTCC
T ss_pred CCEEEE-EEeCCCCCCcHHHHHHHHHHHHHHh--cCCeEEEEEECCC---------CCCCCCCCHHHHHHHHHHcCCC
Confidence 455666 5557799999999999999887663 2468888888863 22222 245667788887754
No 258
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=87.51 E-value=0.39 Score=38.57 Aligned_cols=60 Identities=18% Similarity=0.193 Sum_probs=38.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|..-+|+.|..--..|.++.+++. ..++..+++.+|- .+.+++|.++.++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~--~~~~~~v~vs~d~---------------~~~~~~~~~~~~~~ 88 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFN--QVNAVVLGISVDP---------------PFSNKAFKEHNKLN 88 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGG--GCSSEEEEEESSC---------------HHHHHHHHHHTTCC
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccc--ccCceEeeecccc---------------hhHHHHHHHHcCCc
Confidence 456788988889999999877666666666543 3466777776651 35667888888864
No 259
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=87.31 E-value=0.32 Score=41.41 Aligned_cols=41 Identities=22% Similarity=0.294 Sum_probs=34.5
Q ss_pred CceEEEEecCCCCCCCHHHHHHH---HHhcccCCCCCCCEEEEEEeee
Q 023845 42 GAVLVELFSSQGCKTSPEAEILV---SRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l---~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.++|||.|. -+|++|=..+..| .+|.+++ .++|...-+||+
T Consensus 114 ~~~vveFf~-~~C~~C~~~~p~~~~~~~l~~~~---~~~v~~~~~~v~ 157 (197)
T 1un2_A 114 APQVLEFFS-FFCPHCYQFEEVLHISDNVKKKL---PEGVKMTKYHVN 157 (197)
T ss_dssp CCSEEEEEC-TTCHHHHHHHHTSCHHHHHTTSS---CTTCCEEEEECS
T ss_pred CCEEEEEEC-CCChhHHHhCcccccHHHHHHHC---CCCCEEEEeccC
Confidence 468888665 9999999999988 9999876 357888889998
No 260
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=87.30 E-value=0.18 Score=40.14 Aligned_cols=83 Identities=17% Similarity=0.126 Sum_probs=41.9
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcce
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQ 122 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq 122 (276)
.+|| .|.+.+|++|-..++.+...-+.... ...+..+-+.|+-= .+ ...+..+++++ ||+
T Consensus 20 ~~LV-~F~A~wC~~Ck~~~~~i~~~~~~~a~-~~~~~l~~vdv~~~----------~~------~~la~~~~V~g--~PT 79 (116)
T 3dml_A 20 LRLL-MFEQPGCLYCARWDAEIAPQYPLTDE-GRAAPVQRLQMRDP----------LP------PGLELARPVTF--TPT 79 (116)
T ss_dssp EEEE-EEECTTCHHHHHHHHHTTTTGGGSHH-HHHSCEEEEETTSC----------CC------TTCBCSSCCCS--SSE
T ss_pred CEEE-EEECCCCHHHHHHHHHHHhhHHHhhh-cccceEEEEECCCC----------Cc------hhHHHHCCCCC--CCE
Confidence 4455 77789999998877644432111000 00133344455420 00 11123345554 999
Q ss_pred EEE--cCeEec--cC-CChhhHHHHHHc
Q 023845 123 LVF--QGRVQC--QG-NDQDGMLSAIAN 145 (276)
Q Consensus 123 ~vV--nG~~~~--~g-~~~~~~~~~i~~ 145 (276)
+|+ ||++.. .| .+.+.+.+.|++
T Consensus 80 ~i~f~~G~ev~Ri~G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 80 FVLMAGDVESGRLEGYPGEDFFWPMLAR 107 (116)
T ss_dssp EEEEETTEEEEEEECCCCHHHHHHHHHH
T ss_pred EEEEECCEEEeeecCCCCHHHHHHHHHH
Confidence 776 887643 23 245555555554
No 261
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=87.23 E-value=0.93 Score=38.99 Aligned_cols=45 Identities=13% Similarity=0.005 Sum_probs=34.1
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||-.|.+-.|+.|+..-..|.++.+++. ..+|..|++.+|
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~--~~~v~vv~Is~D 99 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFE--NKNVELLGISVD 99 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHH--HTTEEEEEEESS
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHH--HCCCEEEEEeCC
Confidence 346788877769999999998888888877542 246777777775
No 262
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=87.21 E-value=0.76 Score=43.21 Aligned_cols=83 Identities=16% Similarity=0.179 Sum_probs=55.7
Q ss_pred CceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcc
Q 023845 42 GAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTP 121 (276)
Q Consensus 42 ~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTP 121 (276)
+++|| .|.+.+|++|-.....+.++++.. .+.|.....+.+ .....++++|+.+ +|
T Consensus 22 ~~~lv-~F~a~wC~~C~~~~p~~~~~a~~~---~~~v~~~~vd~~------------------~~~~l~~~~~v~~--~P 77 (481)
T 3f8u_A 22 GLMLV-EFFAPWCGHAKRLAPEYEAAATRL---KGIVPLAKVDCT------------------ANTNTCNKYGVSG--YP 77 (481)
T ss_dssp SEEEE-EEECTTCHHHHHHHHHHHHHHHHT---TTTCCEEEEETT------------------TCHHHHHHTTCCE--ES
T ss_pred CeEEE-EEECCCCHHHHHhHHHHHHHHHHh---cCceEEEEEECC------------------CCHHHHHhcCCCC--CC
Confidence 45555 466789999999999999999875 333444444333 2356788899988 78
Q ss_pred eEEE--cCeEe--ccC-CChhhHHHHHHcCCC
Q 023845 122 QLVF--QGRVQ--CQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 122 q~vV--nG~~~--~~g-~~~~~~~~~i~~~~~ 148 (276)
++++ +|+.. ..| .+.+.+...|.+...
T Consensus 78 tl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~ 109 (481)
T 3f8u_A 78 TLKIFRDGEEAGAYDGPRTADGIVSHLKKQAG 109 (481)
T ss_dssp EEEEEETTEEEEECCSCSSHHHHHHHHHHHTS
T ss_pred EEEEEeCCceeeeecCccCHHHHHHHHHhhcc
Confidence 8655 77532 233 457778888876553
No 263
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=86.84 E-value=0.85 Score=35.51 Aligned_cols=84 Identities=10% Similarity=0.029 Sum_probs=53.3
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
.+.+++|.+|.. |..|-.-...|.++++++ ..+|.-+...+|- + ...+..+|+++--
T Consensus 22 ~~~pv~v~f~a~--~~~c~~~~p~l~~~A~~~---~gk~~f~~vd~d~--------------~----~~~a~~~gi~~~~ 78 (133)
T 2djk_A 22 AGIPLAYIFAET--AEERKELSDKLKPIAEAQ---RGVINFGTIDAKA--------------F----GAHAGNLNLKTDK 78 (133)
T ss_dssp TTSCEEEEECSC--SSSHHHHHHHHHHHHHSS---TTTSEEEEECTTT--------------T----GGGTTTTTCCSSS
T ss_pred CCCCEEEEEecC--hhhHHHHHHHHHHHHHHh---CCeEEEEEEchHH--------------h----HHHHHHcCCCccc
Confidence 445666665554 999998899999999977 4566666666551 1 1245678988755
Q ss_pred cceEEE-c---CeEecc---CC-ChhhHHHHHHcC
Q 023845 120 TPQLVF-Q---GRVQCQ---GN-DQDGMLSAIANA 146 (276)
Q Consensus 120 TPq~vV-n---G~~~~~---g~-~~~~~~~~i~~~ 146 (276)
.|+++| + |+.... |. +.+.+.+.|.+.
T Consensus 79 iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~ 113 (133)
T 2djk_A 79 FPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDF 113 (133)
T ss_dssp SSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHH
T ss_pred CCEEEEEecCcCcccCCCCccccCHHHHHHHHHHH
Confidence 788654 3 544322 32 355666666643
No 264
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=86.22 E-value=1.5 Score=39.55 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=52.1
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+++++|+ |.+.+|++|......+.+|++.+. ..++|+...+..+- .. .+.+++.+ .
T Consensus 267 ~k~~lv~-f~a~wC~~C~~~~p~~~~la~~~~-~~~~v~~~~vd~~~-----------~~---------~~~~~v~~--~ 322 (361)
T 3uem_A 267 KKNVFVE-FYAPWCGHCKQLAPIWDKLGETYK-DHENIVIAKMDSTA-----------NE---------VEAVKVHS--F 322 (361)
T ss_dssp TCEEEEE-EECTTCHHHHHHHHHHHHHHHHTT-TCSSEEEEEEETTT-----------CB---------CSSCCCCS--S
T ss_pred CCcEEEE-EecCcCHhHHHHHHHHHHHHHHhc-cCCcEEEEEEECCc-----------cc---------hhhcCCcc--c
Confidence 4556555 557899999999999999988653 13467777666542 11 23467777 8
Q ss_pred ceEEEc--C--e--EeccC-CChhhHHHHHHcC
Q 023845 121 PQLVFQ--G--R--VQCQG-NDQDGMLSAIANA 146 (276)
Q Consensus 121 Pq~vVn--G--~--~~~~g-~~~~~~~~~i~~~ 146 (276)
|++++= | + ....| .+.+.+...|++.
T Consensus 323 Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 355 (361)
T 3uem_A 323 PTLKFFPASADRTVIDYNGERTLDGFKKFLESG 355 (361)
T ss_dssp SEEEEECSSSSCCCEECCSCSSHHHHHHHHTTT
T ss_pred CeEEEEECCCCcceeEecCCCCHHHHHHHHHhc
Confidence 996653 4 2 22233 3466677766654
No 265
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=85.23 E-value=0.7 Score=39.85 Aligned_cols=106 Identities=11% Similarity=0.090 Sum_probs=62.5
Q ss_pred hcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc-CCCCCC------------CCCCccccHH
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD-YMGWKD------------PYGSSQWTVR 105 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD-ylGWkD------------~fa~~~~t~R 105 (276)
..++.+||=.|....|+.|+..-..|.++.++.. ..+|-.|++.+|--+ +..|.. .+.-|-..+.
T Consensus 29 ~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~--~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~ 106 (224)
T 1prx_A 29 LGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFA--KRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDR 106 (224)
T ss_dssp HTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHH--TTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECT
T ss_pred cCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHH--HCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecC
Confidence 3444688888899999999988888888876543 246777777777432 222322 1122333444
Q ss_pred HHHHHHHhCCC----------CCCcce-EEEc--CeEec-------cCCChhhHHHHHHcC
Q 023845 106 QKAYVEALNLD----------TMFTPQ-LVFQ--GRVQC-------QGNDQDGMLSAIANA 146 (276)
Q Consensus 106 q~~Y~~~~g~~----------~vYTPq-~vVn--G~~~~-------~g~~~~~~~~~i~~~ 146 (276)
.+..++.+|+. ...+|. ++|| |+... .|.+.+++.+.|++.
T Consensus 107 ~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 107 NRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp TCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred chHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 44556777753 234677 5665 44322 234566666666643
No 266
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=83.61 E-value=1.3 Score=36.88 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCCCCcceEEEcCeEeccCCC-hhhHHHHHHcC
Q 023845 106 QKAYVEALNLDTMFTPQLVFQGRVQCQGND-QDGMLSAIANA 146 (276)
Q Consensus 106 q~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~-~~~~~~~i~~~ 146 (276)
....++.+|+.+ ||.|+|||+ .+.|.+ .+.+..+|.+.
T Consensus 156 ~~~~a~~~Gv~G--~Ptfvi~g~-~~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 156 QTHAAIERKVFG--VPTMFLGDE-MWWGNDRLFMLESAMGRL 194 (203)
T ss_dssp HHHHHHHTTCCS--SSEEEETTE-EEESGGGHHHHHHHHHHH
T ss_pred HHHHHHHCCCCc--CCEEEECCE-EEECCCCHHHHHHHHhcc
Confidence 445577788888 999999998 455654 55666666653
No 267
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=82.10 E-value=0.36 Score=42.95 Aligned_cols=105 Identities=13% Similarity=0.088 Sum_probs=63.5
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecc-cCCCCCC--------CCCCccccHHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYW-DYMGWKD--------PYGSSQWTVRQKAYV 110 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYW-DylGWkD--------~fa~~~~t~Rq~~Y~ 110 (276)
.++.+||=.|....|+.|+.--..|+++.++.. ..+|..+++.+|-- ++..|.+ .+.-|-..+..+..+
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~--~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia 109 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQ--RLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVA 109 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHH--HTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHH--hCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHH
Confidence 345677778899999999998888888876542 23577777777631 1222222 122233344445567
Q ss_pred HHhCCCC-----CCcce-EEEc--CeEec-------cCCChhhHHHHHHcC
Q 023845 111 EALNLDT-----MFTPQ-LVFQ--GRVQC-------QGNDQDGMLSAIANA 146 (276)
Q Consensus 111 ~~~g~~~-----vYTPq-~vVn--G~~~~-------~g~~~~~~~~~i~~~ 146 (276)
+.+|+.. ..+|. |+|| |+... .|.+.+++...|.+.
T Consensus 110 ~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 110 RRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 7888651 14885 7785 44332 234567777777654
No 268
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=81.82 E-value=1.3 Score=41.64 Aligned_cols=85 Identities=14% Similarity=0.235 Sum_probs=57.0
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||+ |.+.+|++|-.....|.+|++.+.. .++|+.+.+.++-- .....+++.+ +
T Consensus 370 ~k~vlv~-f~a~wC~~C~~~~p~~~~l~~~~~~-~~~v~~~~id~~~~-------------------~~~~~~~v~~--~ 426 (481)
T 3f8u_A 370 NKDVLIE-FYAPWCGHCKNLEPKYKELGEKLSK-DPNIVIAKMDATAN-------------------DVPSPYEVRG--F 426 (481)
T ss_dssp TCEEEEE-EECTTBHHHHHHHHHHHHHHHHTTT-CSSEEEEEEETTSS-------------------CCCTTCCCCS--S
T ss_pred CCcEEEE-EecCcChhHHHhhHHHHHHHHHhcc-CCCEEEEEEECCch-------------------hhHhhCCCcc--c
Confidence 4567776 5578999999999999999987631 34788887777521 1123567777 8
Q ss_pred ceEEE--cCeE----ecc-CCChhhHHHHHHcCCC
Q 023845 121 PQLVF--QGRV----QCQ-GNDQDGMLSAIANAPK 148 (276)
Q Consensus 121 Pq~vV--nG~~----~~~-g~~~~~~~~~i~~~~~ 148 (276)
|++++ +|.. ... ..+.+.+...|.+...
T Consensus 427 Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 427 PTIYFSPANKKLNPKKYEGGRELSDFISYLQREAT 461 (481)
T ss_dssp SEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCS
T ss_pred CEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcC
Confidence 99777 3332 223 3457778888877543
No 269
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=80.48 E-value=3.9 Score=35.33 Aligned_cols=85 Identities=15% Similarity=0.253 Sum_probs=52.4
Q ss_pred cCCceEEEEecCCC-CCCCHHHHHHHHHhcccCCCCCCC--EEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQG-CKTSPEAEILVSRLGRGDFELGVP--VIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqG-CssCP~Ad~~l~~l~~~~~~~~~~--VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..++++|.+|.... |..|-....+|.+|++.......+ |...-..+| . ....++.+|++
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d----------------~--~~~~~~~~gv~ 85 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE----------------S--DSDKFSEFKVE 85 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT----------------T--THHHHHHTTCC
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC----------------c--CHHHHHhcCCC
Confidence 45689999998764 999999999999998753100111 433333332 1 23468889999
Q ss_pred CCCcceEEE-cCeEeccCCC-hhhHHHHHH
Q 023845 117 TMFTPQLVF-QGRVQCQGND-QDGMLSAIA 144 (276)
Q Consensus 117 ~vYTPq~vV-nG~~~~~g~~-~~~~~~~i~ 144 (276)
. .|++++ +|...+.|.. ...+...+.
T Consensus 86 ~--~Pt~~i~~g~~~~~G~~~~~~l~~fv~ 113 (243)
T 2hls_A 86 R--VPTVAFLGGEVRWTGIPAGEEIRALVE 113 (243)
T ss_dssp S--SSEEEETTTTEEEESCCCTTHHHHHHH
T ss_pred c--CCEEEEECCceeEcCCCcHHHHHHHHH
Confidence 6 899888 4523333443 344444443
No 270
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=80.28 E-value=0.29 Score=40.84 Aligned_cols=40 Identities=18% Similarity=0.299 Sum_probs=30.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..++|||.| +-+|++|-..+..|.++.+++ +|.-.-+|+.
T Consensus 22 ~~~~vvef~-d~~Cp~C~~~~~~~~~~~~~~-----~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVF-ALSCGHCRNMENFLPVISQEA-----GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEE-CTTCHHHHHHGGGHHHHHHHH-----TSCCEEEECC
T ss_pred CCCEEEEEE-CCCChhHHHhhHHHHHHHHHh-----CCeEEEEecc
Confidence 356777766 799999999999999998754 4555556775
No 271
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=80.17 E-value=0.6 Score=37.53 Aligned_cols=60 Identities=13% Similarity=0.075 Sum_probs=39.0
Q ss_pred cCCceEEEEecCCCCCCCH-HHHHHHHHhcccCCCCCCC-EEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSP-EAEILVSRLGRGDFELGVP-VIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP-~Ad~~l~~l~~~~~~~~~~-VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|-+-.|+.|+ .--..|.++.++.....-. ||+++ +| + .+.+++|.++++..
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is--~d------------~---~~~~~~~~~~~~~~ 95 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCIS--VN------------D---PFVMKAWAKSYPEN 95 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEE--SS------------C---HHHHHHHHHTCTTC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE--CC------------C---HHHHHHHHHhcCCC
Confidence 4567888888899999999 5656666666543211223 55554 44 1 34678889988863
No 272
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=80.09 E-value=0.74 Score=43.74 Aligned_cols=85 Identities=18% Similarity=0.214 Sum_probs=55.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
++++||+.| +.+|++|-.....+.+|++++.....+|+.+.+.++--+ . .. +++.+ +
T Consensus 376 ~k~vlv~F~-a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~--------------~-----~~-~~v~~--~ 432 (504)
T 2b5e_A 376 KKDVLVLYY-APWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND--------------V-----RG-VVIEG--Y 432 (504)
T ss_dssp TCCEEEEEE-CTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC--------------C-----SS-CCCSS--S
T ss_pred CCCEEEEEE-CCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc--------------c-----cc-CCcee--c
Confidence 566777655 689999999888898888754211347888777765211 0 11 56666 8
Q ss_pred ceEEE--cCeE----eccC-CChhhHHHHHHcCCC
Q 023845 121 PQLVF--QGRV----QCQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 121 Pq~vV--nG~~----~~~g-~~~~~~~~~i~~~~~ 148 (276)
|++++ +|+. ...| .+...+...|.+...
T Consensus 433 Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 433 PTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGH 467 (504)
T ss_dssp SEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCT
T ss_pred CeEEEEeCCceecceEecCCCCHHHHHHHHHhcCC
Confidence 98776 6743 2234 457778888887654
No 273
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=79.23 E-value=1.6 Score=36.22 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=30.5
Q ss_pred CCceEEEEecCCCCCC-CHHHHHHHHHhcccCCCC-CCCEEEEEEeeec
Q 023845 41 GGAVLVELFSSQGCKT-SPEAEILVSRLGRGDFEL-GVPVIVLAYHVDY 87 (276)
Q Consensus 41 ~~~vvVElFTSqGCss-CP~Ad~~l~~l~~~~~~~-~~~VIaLa~hVdY 87 (276)
++++|| .|..-.|+. |+..-..|.++.++.... .++|..+++.+|.
T Consensus 41 Gk~vlv-~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 41 GKFSII-YFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TSCEEE-EEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCEEEE-EEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 455666 556789998 999888888865432110 2367777777773
No 274
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=79.15 E-value=1.6 Score=36.95 Aligned_cols=59 Identities=15% Similarity=0.134 Sum_probs=39.8
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCcc--ccHHHHHHHH
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQ--WTVRQKAYVE 111 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~--~t~Rq~~Y~~ 111 (276)
.+++||- |....|+.|+..-..|.+|.+++. ..++..|++.+|- |..++ -.+..+.|.+
T Consensus 47 Gk~vlv~-FwatwC~~C~~e~p~l~~l~~~~~--~~g~~vv~v~~d~---------~~~~e~d~~~~i~~f~~ 107 (208)
T 2f8a_A 47 GKVLLIE-NVASLGGTTVRDYTQMNELQRRLG--PRGLVVLGFPCNQ---------FGHQENAKNEEILNSLK 107 (208)
T ss_dssp TSEEEEE-EECSSSTTHHHHHHHHHHHHHHHG--GGTEEEEEEECCC---------STTTTCSCHHHHHHHHH
T ss_pred CCEEEEE-EECCCCccHHHHHHHHHHHHHHcc--CCCeEEEEEECCc---------ccccCCCCHHHHHHHHH
Confidence 3455555 556799999988888899887653 2468888988862 22222 2355677887
No 275
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=78.54 E-value=1.2 Score=38.77 Aligned_cols=45 Identities=20% Similarity=0.124 Sum_probs=35.6
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
..+++||-.|.+-.|+.|+..-..|.++.+++. ..+|..|++.+|
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~--~~gv~vv~Is~D 120 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFR--AINTEVVACSVD 120 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHH--TTTEEEEEEESS
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHH--HCCCEEEEEECC
Confidence 346899999988999999998888888887653 246777777776
No 276
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=78.50 E-value=2.7 Score=35.22 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCCCcceEEEcCeEeccCCC-hhhHHHHHHc
Q 023845 106 QKAYVEALNLDTMFTPQLVFQGRVQCQGND-QDGMLSAIAN 145 (276)
Q Consensus 106 q~~Y~~~~g~~~vYTPq~vVnG~~~~~g~~-~~~~~~~i~~ 145 (276)
....++..|+.+ ||.++|||+. +.|.+ .+.+..+|..
T Consensus 162 ~~~~a~~~Gv~G--vPtfvv~g~~-~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 162 IGEDAVARGIFG--SPFFLVDDEP-FWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHHTTCCS--SSEEEETTEE-EESGGGHHHHHHHHHT
T ss_pred HHHHHHHCCCCc--CCEEEECCEE-EecCCCHHHHHHHHhc
Confidence 344566778887 9999999974 55554 5556666654
No 277
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=78.48 E-value=2.6 Score=36.67 Aligned_cols=43 Identities=14% Similarity=0.127 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCCCCcceEEEcCeEeccCC-ChhhHHHHHHcCCC
Q 023845 104 VRQKAYVEALNLDTMFTPQLVFQGRVQCQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 104 ~Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~g~-~~~~~~~~i~~~~~ 148 (276)
.+....++.+|+.+ ||.|||||+..+.|. +.+.+.++|++...
T Consensus 170 ~~~~~~a~~~Gv~G--vPtfvv~g~~~v~Ga~~~e~~~~~i~~~~~ 213 (239)
T 3gl5_A 170 RADEREAAQLGATG--VPFFVLDRAYGVSGAQPAEVFTQALTQAWG 213 (239)
T ss_dssp HHHHHHHHHTTCCS--SSEEEETTTEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCe--eCeEEECCcEeecCCCCHHHHHHHHHHHHh
Confidence 33445567788888 999999998656665 47778888776554
No 278
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=78.09 E-value=1.4 Score=35.94 Aligned_cols=60 Identities=15% Similarity=0.015 Sum_probs=40.0
Q ss_pred cCCceEEEEecCCCCCCCHH-HHHHHHHhcccCCCCCCCE-EEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPE-AEILVSRLGRGDFELGVPV-IVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~-Ad~~l~~l~~~~~~~~~~V-IaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|-+-.|+.|.. --..|.++.++.. ..+| ..+++.+|- .+.+++|.++.++.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~--~~gv~~vv~Is~d~---------------~~~~~~~~~~~~~~ 91 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIH--GKGVDIIACMAVND---------------SFVMDAWGKAHGAD 91 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHH--HTTCCEEEEEESSC---------------HHHHHHHHHHTTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHH--HCCCCEEEEEeCCC---------------HHHHHHHHHhcCCC
Confidence 34678888888999999998 6666666654432 1244 445554541 34678899998865
No 279
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=77.63 E-value=0.61 Score=40.14 Aligned_cols=105 Identities=4% Similarity=0.102 Sum_probs=62.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeeccc-CCCCCC---------CCCCccccHHHHHH
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWD-YMGWKD---------PYGSSQWTVRQKAY 109 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWD-ylGWkD---------~fa~~~~t~Rq~~Y 109 (276)
.++.+||=.|..-.|+.|+..-..|.++.++.. ..+|-.|++.+|--+ +..|.+ .+.-|-..+..+..
T Consensus 30 Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~--~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~v 107 (220)
T 1xcc_A 30 ENSWAILFSHPNDFTPVCTTELAELGKMHEDFL--KLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESREL 107 (220)
T ss_dssp TTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHH--TTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH--HcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHH
Confidence 333678877899999999988888888876543 246777777777421 233322 12223344444556
Q ss_pred HHHhCCC----------CCCcce-EEEc--CeEec-------cCCChhhHHHHHHcC
Q 023845 110 VEALNLD----------TMFTPQ-LVFQ--GRVQC-------QGNDQDGMLSAIANA 146 (276)
Q Consensus 110 ~~~~g~~----------~vYTPq-~vVn--G~~~~-------~g~~~~~~~~~i~~~ 146 (276)
++.+|+. ...+|. ++|| |+... .|.+.+++.+.|++.
T Consensus 108 a~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 108 ANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp HHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 6777762 123677 5665 43322 234566677766653
No 280
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=77.29 E-value=19 Score=28.49 Aligned_cols=79 Identities=15% Similarity=0.294 Sum_probs=56.3
Q ss_pred ceEEEEec-CCCCCCC---HHHH---HHHHHhcc-cCCCCCCCEEEEEEeeecccCCCCCCCCCCc-c-ccHHHHHHHHH
Q 023845 43 AVLVELFS-SQGCKTS---PEAE---ILVSRLGR-GDFELGVPVIVLAYHVDYWDYMGWKDPYGSS-Q-WTVRQKAYVEA 112 (276)
Q Consensus 43 ~vvVElFT-SqGCssC---P~Ad---~~l~~l~~-~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~-~-~t~Rq~~Y~~~ 112 (276)
++-|.+|- .+=|.|| |.+. +||..+-+ +++ ... |..+|-|. -.| + .|+..++|+++
T Consensus 7 ~v~i~VYGAe~iCASCVnaPSSkeTyEWLqAal~RKyp--~~~-----f~~~YIDI-------~~~~~~l~d~~~~~ae~ 72 (111)
T 1xg8_A 7 SNAVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYP--NIS-----FKYTYIDI-------TKDNDNLTDHDLQFIER 72 (111)
T ss_dssp CEEEEEEECSSCCGGGSSSCCHHHHHHHHHHHHHHHCT--TSC-----EEEEEEET-------TTC---CCHHHHHHHHH
T ss_pred EEEEEEEcccccchhccCCCCchhHHHHHHHHHhCcCC--CCc-----eEEEEEec-------cCCccchhHHHHHHHHH
Confidence 56677775 4679999 5544 57766543 443 334 88888773 333 2 35778899999
Q ss_pred hCCCCCCcceEEEcCeEeccCCC
Q 023845 113 LNLDTMFTPQLVFQGRVQCQGND 135 (276)
Q Consensus 113 ~g~~~vYTPq~vVnG~~~~~g~~ 135 (276)
.--.-.|=|-++|||+...-|..
T Consensus 73 I~ede~FYPlV~indeiVaEGnp 95 (111)
T 1xg8_A 73 IEQDELFYPLITMNDEYVADGYI 95 (111)
T ss_dssp HHTTSSCSSEEEETTEEEEESSC
T ss_pred HhhccccceEEEECCEEeecCCc
Confidence 98888999999999988777765
No 281
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=76.31 E-value=4.3 Score=33.55 Aligned_cols=27 Identities=4% Similarity=0.030 Sum_probs=23.2
Q ss_pred ceEEEEecCCCCCCCHHHHHHHHHhcc
Q 023845 43 AVLVELFSSQGCKTSPEAEILVSRLGR 69 (276)
Q Consensus 43 ~vvVElFTSqGCssCP~Ad~~l~~l~~ 69 (276)
++-|++|.+-.||.|=-+.+++.+|.+
T Consensus 7 ~~~I~~f~D~~CP~C~~~~~~~~~l~~ 33 (216)
T 2in3_A 7 KPVLWYIADPMCSWCWGFAPVIENIRQ 33 (216)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred ceeEEEEECCCCchhhcchHHHHHHHh
Confidence 367889999999999988888888876
No 282
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=74.29 E-value=2.4 Score=37.39 Aligned_cols=44 Identities=16% Similarity=0.067 Sum_probs=34.2
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
.+++||-.|..-.|+.|+..-..|.++.+++. ..+|..|++.+|
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~--~~gv~vv~IS~D 134 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR--SINTEVVACSVD 134 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHH--TTTEEEEEEESS
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHH--HcCCEEEEEcCC
Confidence 45788887879999999998888888877653 246777777776
No 283
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=74.09 E-value=1 Score=35.39 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=21.0
Q ss_pred EEEecCCCCCCCHHHHHHHHHhc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLG 68 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~ 68 (276)
|.+|+..+|+.|-.|.++|.+..
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~g 24 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRHD 24 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCHHHHHHHHHHHHcC
Confidence 68999999999999999999754
No 284
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=73.64 E-value=4 Score=36.15 Aligned_cols=90 Identities=17% Similarity=0.234 Sum_probs=55.4
Q ss_pred hcCCceEEEEec-CCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC-
Q 023845 39 RRGGAVLVELFS-SQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD- 116 (276)
Q Consensus 39 ~~~~~vvVElFT-SqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~- 116 (276)
...++|||+.|+ +.+|+ -...+.+|++++....++|....+.+| + +.. ......+++++++
T Consensus 31 ~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d--~-------~g~----~~n~~la~~~~V~~ 93 (248)
T 2c0g_A 31 ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVK--D-------YGE----LENKALGDRYKVDD 93 (248)
T ss_dssp TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEEC--S-------STT----CTTHHHHHHTTCCT
T ss_pred hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECC--c-------ccc----cccHHHHHHhCCCc
Confidence 345689999886 66665 677777887654110247887777765 0 000 1124578899999
Q ss_pred -CCCcceEEE-cCe----Ee---ccCCChhhHHHHHHcCC
Q 023845 117 -TMFTPQLVF-QGR----VQ---CQGNDQDGMLSAIANAP 147 (276)
Q Consensus 117 -~vYTPq~vV-nG~----~~---~~g~~~~~~~~~i~~~~ 147 (276)
+ .|++++ .|. .. .++.+.+.+...|.+..
T Consensus 94 ~~--~PTl~~F~G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 94 KN--FPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp TS--CCEEEEESSSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CC--CCeEEEEeCCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 7 777554 244 12 24456778888887643
No 285
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=73.45 E-value=5.8 Score=33.61 Aligned_cols=58 Identities=5% Similarity=-0.024 Sum_probs=37.7
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHH
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVE 111 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~ 111 (276)
+||=.|+...|+.|+ --..|.+|.+++. ..++..|++.+|-.+. . .+.-.+..+.|.+
T Consensus 40 vvll~F~At~C~~c~-e~p~L~~l~~~~~--~~g~~vlgvs~d~f~~---~----e~~~~~~i~~f~~ 97 (207)
T 2r37_A 40 YVLFVNVASYGGLTG-QYIELNALQEELA--PFGLVILGFPCNQFGK---Q----EPGENSEILPTLK 97 (207)
T ss_dssp EEEEEEECSSSTTTT-HHHHHHHHHHHHG--GGTEEEEEEECCCBTT---C----CCSCHHHHHHHHH
T ss_pred EEEEEEeCCCCCChH-HHHHHHHHHHHhc--cCCEEEEEEECcccCc---C----CCCCHHHHHHHHH
Confidence 555568899999995 4556788877663 3469999999873211 1 1122345677887
No 286
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=72.96 E-value=9.9 Score=34.14 Aligned_cols=84 Identities=10% Similarity=0.097 Sum_probs=50.5
Q ss_pred CCceEEEEecCCCCCCCH----H---HHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHh
Q 023845 41 GGAVLVELFSSQGCKTSP----E---AEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEAL 113 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP----~---Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~ 113 (276)
.+++||+ |.+.+|+ |- . ....+.++++... ..+|......++ .....++++
T Consensus 28 ~~~~lV~-F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~--~~~v~~~~Vd~~------------------~~~~l~~~~ 85 (350)
T 1sji_A 28 YDVLCLY-YHESVSS-DKVAQKQFQLKEIVLELVAQVLE--HKDIGFVMVDAK------------------KEAKLAKKL 85 (350)
T ss_dssp CSEEEEE-EECCSCS-SSTTSHHHHHHHHHHHHHHHHGG--GSSEEEEEEETT------------------TTHHHHHHH
T ss_pred CCeEEEE-EECCCCc-chhhCchhhhhhHHHHHHHHHHh--hcCcEEEEEeCC------------------CCHHHHHhc
Confidence 4556665 5578999 72 2 1222666665431 125766666554 124578889
Q ss_pred CCCCCCcceEEE--cCeEe-ccC-CChhhHHHHHHcCCC
Q 023845 114 NLDTMFTPQLVF--QGRVQ-CQG-NDQDGMLSAIANAPK 148 (276)
Q Consensus 114 g~~~vYTPq~vV--nG~~~-~~g-~~~~~~~~~i~~~~~ 148 (276)
++.+ .|++++ +|+.. ..| .+.+.+...|.+...
T Consensus 86 ~v~~--~Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~ 122 (350)
T 1sji_A 86 GFDE--EGSLYVLKGDRTIEFDGEFAADVLVEFLLDLIE 122 (350)
T ss_dssp TCCS--TTEEEEEETTEEEEECSCCCHHHHHHHHHTTSS
T ss_pred CCCc--cceEEEEECCcEEEecCCCCHHHHHHHHHHhcC
Confidence 9988 787654 77643 233 467778888887654
No 287
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=72.77 E-value=1.3 Score=36.29 Aligned_cols=29 Identities=10% Similarity=0.195 Sum_probs=21.2
Q ss_pred hhcCCceEEEEecCCCCCCCHHHHHHHHHh
Q 023845 38 MRRGGAVLVELFSSQGCKTSPEAEILVSRL 67 (276)
Q Consensus 38 ~~~~~~vvVElFTSqGCssCP~Ad~~l~~l 67 (276)
...+++|||. |++.+|+.|-.-+..+.++
T Consensus 41 ~~~~KpVlV~-F~A~WC~~Ck~m~p~~~~~ 69 (151)
T 3ph9_A 41 QKSKKPLMVI-HHLEDCQYSQALKKVFAQN 69 (151)
T ss_dssp HHHTCCEEEE-ECCTTCHHHHHHHHHHHHC
T ss_pred HHcCCcEEEE-EECCCCHhHHHHHHHHhcC
Confidence 3456677775 5589999998877777653
No 288
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=72.61 E-value=4.5 Score=40.52 Aligned_cols=85 Identities=13% Similarity=0.196 Sum_probs=50.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
..+++||+ |.+.+|++|-.....+.+++++. .+.|......++- .+ ..++++++..
T Consensus 132 ~~~~~lv~-Fya~wC~~C~~~~p~~~~~a~~~---~~~v~~~~vd~~~-----------~~-------~l~~~~~v~~-- 187 (780)
T 3apo_A 132 SGELWFVN-FYSPGSSHSHDLAPTWREFAKEV---DGLLRIGAVNCGD-----------DR-------MLCRMKGVNS-- 187 (780)
T ss_dssp SSSCEEEE-EECSSCHHHHHHHHHHHHHHHHT---TTTSEEEEEETTT-----------CS-------SCC---------
T ss_pred CCCcEEEE-EeCCCCcchhHhhHHHHHHHHHh---cCceEEEEEeCCC-----------cH-------HHHHHcCCce--
Confidence 44566665 55689999999999999998865 3346665555542 11 2334567776
Q ss_pred cceEEE--cCeE--eccCC-ChhhHHHHHHcCCC
Q 023845 120 TPQLVF--QGRV--QCQGN-DQDGMLSAIANAPK 148 (276)
Q Consensus 120 TPq~vV--nG~~--~~~g~-~~~~~~~~i~~~~~ 148 (276)
+|++++ +|+. ...|. +.+.+...|.+...
T Consensus 188 ~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~ 221 (780)
T 3apo_A 188 YPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVR 221 (780)
T ss_dssp -CEEEEECTTSCCEECCSCSCHHHHHHHHHTTSC
T ss_pred eeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhch
Confidence 788776 6653 23443 46778888877653
No 289
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=72.46 E-value=1.8 Score=36.33 Aligned_cols=80 Identities=5% Similarity=-0.024 Sum_probs=41.8
Q ss_pred hhhhcCCceEEEEecCCCCCCCHHHHH-HH--HHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHH-H
Q 023845 36 EEMRRGGAVLVELFSSQGCKTSPEAEI-LV--SRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYV-E 111 (276)
Q Consensus 36 ~~~~~~~~vvVElFTSqGCssCP~Ad~-~l--~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~-~ 111 (276)
.+...+++|||. |+..+|..|=.-+. .+ .++++.. .++++.+.+.+| ..|+...+-..+. .
T Consensus 34 ~A~~~~KpVlvd-F~A~WC~~Ck~m~~~~f~~~~va~~l---~~~fv~ikVD~d-----------e~~~l~~~y~~~~q~ 98 (173)
T 3ira_A 34 KARKENKPVFLS-IGYSTCHWCHMMAHESFEDEEVAGLM---NEAFVSIKVDRE-----------ERPDIDNIYMTVCQI 98 (173)
T ss_dssp HHHHHTCCEEEE-EECTTCHHHHHHHHHTTTCHHHHHHH---HHHCEEEEEETT-----------TCHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEe-cccchhHhhccccccccCCHHHHHHH---HhcCceeeeCCc-----------ccCcHHHHHHHHHHH
Confidence 344556777775 56899999966433 11 1222211 236776666544 2232222211111 2
Q ss_pred HhCCCCCCcceEEE---cCeEecc
Q 023845 112 ALNLDTMFTPQLVF---QGRVQCQ 132 (276)
Q Consensus 112 ~~g~~~vYTPq~vV---nG~~~~~ 132 (276)
.+|+.+ +|.+++ +|+....
T Consensus 99 ~~gv~g--~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 99 ILGRGG--WPLNIIMTPGKKPFFA 120 (173)
T ss_dssp HHSCCC--SSEEEEECTTSCEEEE
T ss_pred HcCCCC--CcceeeECCCCCceee
Confidence 247777 898554 5776655
No 290
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=72.14 E-value=11 Score=33.76 Aligned_cols=85 Identities=7% Similarity=0.000 Sum_probs=54.9
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
.++=+|.+..|+.|-.....+.++++++ ...|.-+....+ ........+.+|+..--.|++
T Consensus 137 ~~~v~F~~~~~~~~~~~~~~~~~~A~~~---~~~i~f~~vd~~----------------~~~~~~~~~~fgi~~~~~P~~ 197 (361)
T 3uem_A 137 THILLFLPKSVSDYDGKLSNFKTAAESF---KGKILFIFIDSD----------------HTDNQRILEFFGLKKEECPAV 197 (361)
T ss_dssp EEEEEECCSSSSSHHHHHHHHHHHHGGG---TTTCEEEEECTT----------------SGGGHHHHHHTTCCTTTCSEE
T ss_pred cEEEEEEeCCchhHHHHHHHHHHHHHHc---cCceEEEEecCC----------------hHHHHHHHHHcCCCccCCccE
Confidence 4455899999999999999999999876 445555554433 012245678899876568886
Q ss_pred EE-cC-eE--ec----cCCChhhHHHHHHcCC
Q 023845 124 VF-QG-RV--QC----QGNDQDGMLSAIANAP 147 (276)
Q Consensus 124 vV-nG-~~--~~----~g~~~~~~~~~i~~~~ 147 (276)
++ +. .. .. ...+.+.+...|....
T Consensus 198 ~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 198 RLITLEEEMTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp EEEECC--CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred EEEEcCCcccccCCCccccCHHHHHHHHHHHh
Confidence 65 32 21 11 2345677777776543
No 291
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=71.93 E-value=6.7 Score=33.17 Aligned_cols=27 Identities=19% Similarity=-0.017 Sum_probs=21.6
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhccc
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRG 70 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~ 70 (276)
+-||+|..--||.|=-+.+.|.+|.++
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~ 32 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHL 32 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTT
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHH
Confidence 567888888888888888888887764
No 292
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=71.12 E-value=1.1 Score=35.42 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=21.1
Q ss_pred EEEecCCCCCCCHHHHHHHHHhc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLG 68 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~ 68 (276)
|.+|+..+|+.|-.|.++|.+-.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~g 28 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIENN 28 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHcC
Confidence 78999999999999999999754
No 293
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=70.28 E-value=0.69 Score=37.61 Aligned_cols=60 Identities=17% Similarity=0.064 Sum_probs=39.2
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|.+-+|+.|+.--..|.++.++.. ..++..+++.+|- .+.++.|.+.+++.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~--~~~v~vv~is~d~---------------~~~~~~~~~~~~~~ 91 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLE--KANAEVLAISVDS---------------PWCLKKFKDENRLA 91 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGG--GSSSEEEEEESSC---------------HHHHHHHHHHTTCC
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhh--ccCceEEEecCCC---------------HHHHHHHHHhcCcc
Confidence 346788888889999999865444444444432 2356666666651 35567788888864
No 294
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=70.03 E-value=1.2 Score=36.27 Aligned_cols=24 Identities=13% Similarity=0.293 Sum_probs=21.2
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGR 69 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~ 69 (276)
|.+|+..+|+.|-.|.+||.+-.-
T Consensus 4 itiY~~p~C~~crkak~~L~~~gi 27 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNSGT 27 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHTTC
T ss_pred EEEEECCCChHHHHHHHHHHHcCC
Confidence 679999999999999999997543
No 295
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=69.02 E-value=1.6 Score=34.47 Aligned_cols=25 Identities=16% Similarity=0.364 Sum_probs=22.1
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcc
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGR 69 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~ 69 (276)
.|.+|+..+|+.|-.|.+||.+-.-
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~~gi 28 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDDLAW 28 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHHHTC
T ss_pred eEEEEeCCCChHHHHHHHHHHHcCC
Confidence 4789999999999999999997543
No 296
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=68.32 E-value=5.9 Score=33.90 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=30.8
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeee
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVD 86 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVd 86 (276)
+||=.|+...|+.|+ --..|.+|.+++. ..++..|++.+|
T Consensus 58 vvll~FwAt~C~~c~-e~p~L~~l~~~~~--~~g~~Vlgvs~d 97 (215)
T 2i3y_A 58 HILFVNVATYCGLTA-QYPELNALQEELK--PYGLVVLGFPCN 97 (215)
T ss_dssp EEEEEEECSSSGGGG-GHHHHHHHHHHHG--GGTEEEEEEECC
T ss_pred EEEEEEeCCCCCChH-hHHHHHHHHHHhc--cCCeEEEEEEcc
Confidence 556668999999998 5566788877663 346999999886
No 297
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=68.00 E-value=9.9 Score=32.70 Aligned_cols=42 Identities=14% Similarity=0.033 Sum_probs=29.3
Q ss_pred HHHHHHhCCCCCCcceEEEc--Ce-EeccCCC-hhhHHHHHHcCCCCC
Q 023845 107 KAYVEALNLDTMFTPQLVFQ--GR-VQCQGND-QDGMLSAIANAPKFP 150 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vVn--G~-~~~~g~~-~~~~~~~i~~~~~~~ 150 (276)
...+...|+.+ ||.+||| |+ +.+.|.+ .+.+...|.+....|
T Consensus 172 ~~~a~~~Gv~G--vPtfvv~~~g~~~~f~G~drl~~l~~~L~~~~~~p 217 (234)
T 3rpp_A 172 TEAACRYGAFG--LPITVAHVDGQTHMLFGSDRMELLAHLLGEKWMGP 217 (234)
T ss_dssp HHHHHHTTCSS--SCEEEEEETTEEEEEESSSCHHHHHHHHTCCCCCS
T ss_pred HHHHHHcCCCC--CCEEEEeCCCCcCceeCccCHHHHHHHhccccCCC
Confidence 34456678877 9999995 85 7778887 455777776654444
No 298
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=67.91 E-value=3.5 Score=34.37 Aligned_cols=60 Identities=17% Similarity=0.011 Sum_probs=40.1
Q ss_pred cCCceEEEEecCCCCCCCHH-HHHHHHHhcccCCCCCCC-EEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPE-AEILVSRLGRGDFELGVP-VIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~-Ad~~l~~l~~~~~~~~~~-VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||-.|.+-.|+.|.. --..|.++.++..+..-. ||+++ +| | ...+++|.++.++.
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is--~d--------~-------~~~~~~f~~~~~~~ 116 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVA--VN--------D-------LHVMGAWATHSGGM 116 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEE--SS--------C-------HHHHHHHHHHHTCT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEE--CC--------C-------HHHHHHHHHHhCCC
Confidence 34678898999999999998 466677776543211223 55555 43 1 24578889998875
No 299
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=67.79 E-value=0.6 Score=40.85 Aligned_cols=46 Identities=13% Similarity=-0.126 Sum_probs=33.4
Q ss_pred cCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeec
Q 023845 40 RGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDY 87 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdY 87 (276)
.++.+||-.|....|+.|+..-..|.++.++.. ..+|-.|++.+|-
T Consensus 28 Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~--~~~v~vigIS~D~ 73 (233)
T 2v2g_A 28 GNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFK--KRGVKLIALSCDN 73 (233)
T ss_dssp CSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHH--HTTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHH--HcCCEEEEEcCCC
Confidence 334788877789999999988888888776542 2367777777763
No 300
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=66.72 E-value=1.5 Score=34.47 Aligned_cols=23 Identities=26% Similarity=0.489 Sum_probs=21.0
Q ss_pred EEEecCCCCCCCHHHHHHHHHhc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLG 68 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~ 68 (276)
|.+|+..+|+.|-.|.+||.+-.
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~g 28 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLENQG 28 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHcC
Confidence 78999999999999999999743
No 301
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=66.32 E-value=1.4 Score=34.82 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=20.9
Q ss_pred EEEecCCCCCCCHHHHHHHHHhc
Q 023845 46 VELFSSQGCKTSPEAEILVSRLG 68 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~ 68 (276)
|.+|+..+|+.|-.|.+||.+-.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~~g 29 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQQG 29 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHTTT
T ss_pred EEEEECCCCHHHHHHHHHHHHcC
Confidence 78999999999999999999643
No 302
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=64.66 E-value=3.6 Score=34.94 Aligned_cols=60 Identities=17% Similarity=-0.005 Sum_probs=38.5
Q ss_pred cCCceEEEEecCCCCCCCH-HHHHHHHHhcccCCCCCCCE-EEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSP-EAEILVSRLGRGDFELGVPV-IVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP-~Ad~~l~~l~~~~~~~~~~V-IaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
.++++||-.|-+..|+.|+ .--..|.++.++.. ..++ ..+++.+|- .+..++|.++++..
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~--~~~~~~vv~is~d~---------------~~~~~~~~~~~~~~ 93 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFK--KYGVDDILVVSVND---------------TFVMNAWKEDEKSE 93 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHH--HTTCCEEEEEESSC---------------HHHHHHHHHHTTCT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHH--HCCCCEEEEEEcCC---------------HHHHHHHHHhcCCC
Confidence 3467888888899999999 66666777765432 1245 455554541 23566777777753
No 303
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=63.37 E-value=6.2 Score=32.03 Aligned_cols=58 Identities=14% Similarity=0.023 Sum_probs=38.2
Q ss_pred CCceEEEEecCCCCCCCHHH-HHHHHHhcccCCCCCCC-EEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCC
Q 023845 41 GGAVLVELFSSQGCKTSPEA-EILVSRLGRGDFELGVP-VIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNL 115 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~A-d~~l~~l~~~~~~~~~~-VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~ 115 (276)
.+.+||-.|.+-.|+.|..- -..|.++.++.....=. |++++ +|- .+.+++|.++.++
T Consensus 43 gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is--~d~---------------~~~~~~~~~~~~~ 102 (171)
T 2pwj_A 43 DKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVA--IND---------------PYTVNAWAEKIQA 102 (171)
T ss_dssp TSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEE--SSC---------------HHHHHHHHHHTTC
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe--CCC---------------HHHHHHHHHHhCC
Confidence 44788889999999999986 66666665543211224 55554 441 2457888888886
No 304
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=58.15 E-value=50 Score=29.90 Aligned_cols=86 Identities=7% Similarity=-0.003 Sum_probs=50.6
Q ss_pred hcCCceEEEEecCCCCCCCHHHH------HHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHH
Q 023845 39 RRGGAVLVELFSSQGCKTSPEAE------ILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEA 112 (276)
Q Consensus 39 ~~~~~vvVElFTSqGCssCP~Ad------~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~ 112 (276)
...+++||+.| +.+|++|--+. ..+.+++.... ..+|......++ .....+++
T Consensus 28 ~~~~~vlV~Fy-ApWC~~~~~~~~l~~~~p~~e~~a~~~~--~~~v~~~~Vd~~------------------~~~~l~~~ 86 (367)
T 3us3_A 28 KKYEVLALLYH-EPPEDDKASQRQFEMEELILELAAQVLE--DKGVGFGLVDSE------------------KDAAVAKK 86 (367)
T ss_dssp HHCSEEEEEEE-CCCCSSHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEETT------------------TTHHHHHH
T ss_pred hhCCeEEEEEE-CCCchhHHHhhhhccccHHHHHHHHHhh--cCCceEEEEeCc------------------ccHHHHHH
Confidence 34566777655 68999962222 24455544321 235666665554 22467889
Q ss_pred hCCCCCCcce--EEEcCeEec--cCCChhhHHHHHHcCC
Q 023845 113 LNLDTMFTPQ--LVFQGRVQC--QGNDQDGMLSAIANAP 147 (276)
Q Consensus 113 ~g~~~vYTPq--~vVnG~~~~--~g~~~~~~~~~i~~~~ 147 (276)
+|+++ .|+ ++-||+... ++.+.+.+...|.+..
T Consensus 87 ~~V~~--~PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~ 123 (367)
T 3us3_A 87 LGLTE--EDSIYVFKEDEVIEYDGEFSADTLVEFLLDVL 123 (367)
T ss_dssp HTCCS--TTEEEEEETTEEEECCSCCSHHHHHHHHHHHH
T ss_pred cCCCc--CceEEEEECCcEEEeCCCCCHHHHHHHHHHhc
Confidence 99998 666 445886532 3445777777777654
No 305
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=54.70 E-value=24 Score=30.77 Aligned_cols=28 Identities=7% Similarity=-0.124 Sum_probs=20.8
Q ss_pred cCCceEEEEecCCCCCCCH-----HHHHHHHHh
Q 023845 40 RGGAVLVELFSSQGCKTSP-----EAEILVSRL 67 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP-----~Ad~~l~~l 67 (276)
..+++||-.|.|-.|+.|+ .--..|.++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~ 79 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS 79 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH
Confidence 3467999999999999999 444445444
No 306
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=48.81 E-value=18 Score=30.39 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=20.4
Q ss_pred HHHHHHHHhCCCCCCcceEEEcCeEecc
Q 023845 105 RQKAYVEALNLDTMFTPQLVFQGRVQCQ 132 (276)
Q Consensus 105 Rq~~Y~~~~g~~~vYTPq~vVnG~~~~~ 132 (276)
+....++.+|+.+ ||.++|||+....
T Consensus 38 ~~~~~a~~~gi~g--vP~fvingk~~~~ 63 (197)
T 1un2_A 38 QQEKAAADVQLRG--VPAMFVNGKYQLN 63 (197)
T ss_dssp HHHHHHHHTTCCS--SSEEEETTTEEEC
T ss_pred HHHHHHHHcCCCc--CCEEEEcceEecC
Confidence 3444577889998 9999999987654
No 307
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=48.32 E-value=18 Score=29.85 Aligned_cols=28 Identities=7% Similarity=-0.001 Sum_probs=21.5
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccC
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGD 71 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~ 71 (276)
.-|+.|.+-.||.|=-+...|.++.+++
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~ 30 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQL 30 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhC
Confidence 3577888888888888888887777654
No 308
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=43.54 E-value=13 Score=30.58 Aligned_cols=60 Identities=10% Similarity=-0.071 Sum_probs=38.0
Q ss_pred cCCceEEEEecCCCCCCCHH-HHHHHHHhcccCCCCCCCEEEEE-EeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 40 RGGAVLVELFSSQGCKTSPE-AEILVSRLGRGDFELGVPVIVLA-YHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 40 ~~~~vvVElFTSqGCssCP~-Ad~~l~~l~~~~~~~~~~VIaLa-~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
..+++||=.|-+-.|+.|.. --..|.++.++.. ..++..++ +.+|- .+.+++|.+..+..
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~--~~gv~vv~~iS~D~---------------~~~~~~f~~~~~~~ 103 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALK--AKGVQVVACLSVND---------------AFVTGEWGRAHKAE 103 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHH--TTTCCEEEEEESSC---------------HHHHHHHHHHTTCT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHH--hCCCEEEEEEcCCC---------------HHHHHHHHHHhCCC
Confidence 34678888889999999994 4455666554332 12343443 44441 34678889998875
No 309
>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*
Probab=37.63 E-value=51 Score=27.71 Aligned_cols=74 Identities=18% Similarity=0.162 Sum_probs=41.0
Q ss_pred EEEEe--------cCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 45 LVELF--------SSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 45 vVElF--------TSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
-++|| +...||.|=...-+|.++.-.+ .++ .|+.. .+...|.+.....
T Consensus 13 ~i~ly~~~~~~~~~~~~sp~~~rv~~~L~~~gi~y-----e~~----~v~~~---------------~~~~~~~~~nP~g 68 (247)
T 2r4v_A 13 EIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKF-----NVT----TVDMT---------------RKPEELKDLAPGT 68 (247)
T ss_dssp CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCC-----EEE----EECCC-------------------------CCS
T ss_pred CEEEEEecCcccccCCCChhHHHHHHHHHHcCCCc-----EEE----EcCcc---------------cchHHHHHhCCCC
Confidence 37899 7888888887777777765432 222 22321 1112333333344
Q ss_pred CCCcceEEEcCeEeccCCChhhHHHHHHcCC
Q 023845 117 TMFTPQLVFQGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 117 ~vYTPq~vVnG~~~~~g~~~~~~~~~i~~~~ 147 (276)
. +|.++.||.... +...+...|.+..
T Consensus 69 ~--vP~L~~~g~~l~---ES~aI~~YL~~~~ 94 (247)
T 2r4v_A 69 N--PPFLVYNKELKT---DFIKIEEFLEQTL 94 (247)
T ss_dssp S--SCEEEETTEEEC---CHHHHHHHHHHHS
T ss_pred C--CCEEEECCEecc---CHHHHHHHHHHhc
Confidence 4 899998886542 4566777777543
No 310
>3h7h_A Transcription elongation factor SPT4; helices surrounding beta sheet, activator, ME binding, nucleus, repressor, transcription regulation; 1.55A {Homo sapiens}
Probab=35.77 E-value=11 Score=30.45 Aligned_cols=69 Identities=16% Similarity=0.257 Sum_probs=40.5
Q ss_pred EEecCCCCCCCHH-------HHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCC
Q 023845 47 ELFSSQGCKTSPE-------AEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMF 119 (276)
Q Consensus 47 ElFTSqGCssCP~-------Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vY 119 (276)
+-|..+||++|.. -|++.+-+... +..+|+|. +|+.+.- ++..+ -..|
T Consensus 29 ~qF~~~gCpnC~~~l~m~~~~d~v~~ctT~~----f~G~I~i~----------------dP~~SwV----Ak~~~-i~~~ 83 (120)
T 3h7h_A 29 DQFEYDGCDNCDAYLQMKGNREMVYDCTSSS----FDGIIAMM----------------SPEDSWV----SKWQR-VSNF 83 (120)
T ss_dssp HHHHHHCCTTTHHHHCCTTCHHHHHHHEESC----EEEEEEES----------------CGGGCHH----HHHTT-CTTS
T ss_pred hhccCCCCCCCcchhhccCCcccccccccCC----cceEEEEe----------------CCcHHHH----HHHhc-cCCC
Confidence 4466789999996 56655555553 56777663 2332221 33344 4558
Q ss_pred cceE---EEcCeEeccCCChhhHHHHHHcC
Q 023845 120 TPQL---VFQGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 120 TPq~---vVnG~~~~~g~~~~~~~~~i~~~ 146 (276)
+|.. -|+|+ -++++...+...
T Consensus 84 vPG~YAlkV~g~------lp~~i~~~le~~ 107 (120)
T 3h7h_A 84 KPGVYAVSVTGR------LPQGIVRELKSR 107 (120)
T ss_dssp CSEEEEEEECCC------CCHHHHHHHHHT
T ss_pred CCCeEEEEecCc------CCHHHHHHHHHc
Confidence 8875 45554 356676666653
No 311
>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A
Probab=32.02 E-value=56 Score=28.10 Aligned_cols=74 Identities=20% Similarity=0.214 Sum_probs=43.2
Q ss_pred EEEEe--------cCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCC
Q 023845 45 LVELF--------SSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLD 116 (276)
Q Consensus 45 vVElF--------TSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~ 116 (276)
-++|| +...||.|=...-+|.++.-.+ .+ .+|+..+ +...|.+.....
T Consensus 18 ~i~ly~~~~~~~~~~~~~p~~~rv~~~L~~~gi~y-----e~----~~v~~~~---------------~~~~~~~~nP~g 73 (267)
T 2ahe_A 18 LIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVF-----SV----TTVDLKR---------------KPADLQNLAPGT 73 (267)
T ss_dssp CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCC-----EE----EEECTTS---------------CCHHHHHHSTTC
T ss_pred CEEEEEecCCCccCCCCCchHHHHHHHHHHcCCCC-----EE----EEeCccc---------------ChHHHHHhCCCC
Confidence 47999 6667777766666777654432 11 1233211 113445554455
Q ss_pred CCCcceEEEcCeEeccCCChhhHHHHHHcCC
Q 023845 117 TMFTPQLVFQGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 117 ~vYTPq~vVnG~~~~~g~~~~~~~~~i~~~~ 147 (276)
. +|.++.||.... +...+...|.+..
T Consensus 74 k--VPvL~~~g~~l~---ES~aI~~YL~~~~ 99 (267)
T 2ahe_A 74 H--PPFITFNSEVKT---DVNKIEEFLEEVL 99 (267)
T ss_dssp C--SCEEEETTEEEC---CHHHHHHHHHHHS
T ss_pred C--CCEEEECCEEec---CHHHHHHHHHHhc
Confidence 5 899999986542 4567777777643
No 312
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=31.41 E-value=50 Score=26.94 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=43.9
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
++||.+.+|++|-..--+|+++.-.+ ++ ..||..+ . ..+...|.+..-... +|.++.
T Consensus 3 mkLY~~~~S~~~~~v~~~l~~~gi~~-----e~----~~v~~~~----------~--~~~~~~~~~~nP~g~--vP~L~d 59 (216)
T 3vk9_A 3 IDLYYVPGSAPCRAVLLTAKALNLNL-----NL----KLVDLHH----------G--EQLKPEYLKLNPQHT--VPTLVD 59 (216)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCC-----EE----EECCGGG----------T--GGGSHHHHHHCTTCC--SCEEEE
T ss_pred EEEEeCCCChhHHHHHHHHHHcCCCC-----EE----EEeCCCC----------C--ccCCHHHHHhCCCCc--cceEec
Confidence 58999998888877666677665432 22 2344211 1 122345555444444 899998
Q ss_pred cCeEeccCCChhhHHHHHHc
Q 023845 126 QGRVQCQGNDQDGMLSAIAN 145 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~~ 145 (276)
||.... +...+...|.+
T Consensus 60 ~g~~l~---eS~aI~~YL~~ 76 (216)
T 3vk9_A 60 DGLSIW---ESRAIITYLVN 76 (216)
T ss_dssp TTEEEC---CHHHHHHHHHH
T ss_pred CCceee---chHHHHHHHHH
Confidence 887654 34667777754
No 313
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=29.49 E-value=79 Score=25.47 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=45.3
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
+.+.||++..||+|=..--+|.++.-.+ .+ .+||.++ .+ ..|.+..-... +|.+
T Consensus 2 ~Mm~LY~~~~sP~~~rvr~~L~e~gi~~-----e~----~~v~~~~---------~~------~~~~~~nP~g~--vPvL 55 (210)
T 4hoj_A 2 VMMTLYSGITCPFSHRCRFVLYEKGMDF-----EI----KDIDIYN---------KP------EDLAVMNPYNQ--VPVL 55 (210)
T ss_dssp --CEEEECTTCHHHHHHHHHHHHHTCCC-----EE----EECCTTS---------CC------HHHHHHCTTCC--SCEE
T ss_pred ceEEEecCCCChHHHHHHHHHHHcCCCC-----EE----EEeCCCC---------CC------HHHHHHCCCCC--CcEE
Confidence 3578999988887777777777765432 22 2455432 11 24555555555 8999
Q ss_pred EEcCeEeccCCChhhHHHHHHcC
Q 023845 124 VFQGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 124 vVnG~~~~~g~~~~~~~~~i~~~ 146 (276)
+.||.... +...+...|.+.
T Consensus 56 ~~~~~~l~---ES~aI~~yL~~~ 75 (210)
T 4hoj_A 56 VERDLVLH---ESNIINEYIDER 75 (210)
T ss_dssp EETTEEEE---SHHHHHHHHHHH
T ss_pred EECCEEEe---ccHHHHHHHHHh
Confidence 99987653 345677777654
No 314
>3ppu_A Glutathione-S-transferase; GST fold; HET: GSH; 2.30A {Phanerochaete chrysosporium}
Probab=28.11 E-value=1.4e+02 Score=27.33 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=53.6
Q ss_pred hhhhcCCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCC------------CCCCCcccc
Q 023845 36 EEMRRGGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWK------------DPYGSSQWT 103 (276)
Q Consensus 36 ~~~~~~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWk------------D~fa~~~~t 103 (276)
.+++..| .-||.|-.||.|=.+--+|....- +++|.+..---+.|..||. |++.. ..
T Consensus 71 ~~~e~gr---y~Ly~s~~CP~a~Rv~i~l~lKGL------~~~I~v~~v~~~~~~~gW~f~~~~~~~g~~~d~~~~--~e 139 (352)
T 3ppu_A 71 FTPEKGR---YHLYVSYACPWATRTLIVRKLKGL------EDFIGVTVVSPRMGSNGWPFANVDPFPAADSDPLNN--AQ 139 (352)
T ss_dssp SCCCTTS---EEEEECSSCHHHHHHHHHHHHTTC------TTTSEEEECCSCCBTTBSBCTTTSCCTTCCCCTTTC--CS
T ss_pred CCCCCCc---EEEEEeCCCchHHHHHHHHHHcCC------CceeEEEEecCCCCCCCceeccccccCCCCcCcccc--cc
Confidence 3444444 558999888777666555554332 2444443322223678886 22221 23
Q ss_pred HHHHHHHHHhCCC--CCCcceEEE--cCeEeccCCChhhHHHHHHcCC
Q 023845 104 VRQKAYVEALNLD--TMFTPQLVF--QGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 104 ~Rq~~Y~~~~g~~--~vYTPq~vV--nG~~~~~g~~~~~~~~~i~~~~ 147 (276)
.+...|.+..-.. ..-+|.++. +|..... +...+...|.+..
T Consensus 140 ~~~~~y~~~nP~g~gr~kVPvL~d~~~g~~vl~--ES~aI~~YL~~~f 185 (352)
T 3ppu_A 140 HVKDLYLKVKPDYDGRFTVPVLWDKHTGTIVNN--ESSEIIRMFNTAF 185 (352)
T ss_dssp BHHHHHHHHCTTCCSCCCSCEEEETTTTEEEEC--CHHHHHHHHHHTT
T ss_pred cchHHHHHhCCCCCCCeeeeEEEEeCCCCEEEe--cHHHHHHHHHHhc
Confidence 3456776664333 123899987 3533322 4566777777643
No 315
>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*
Probab=27.95 E-value=2.1e+02 Score=22.45 Aligned_cols=75 Identities=8% Similarity=0.068 Sum_probs=44.6
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
+.||++..|++|=...-+|.++.-. |....-|...|. .+...|.+...... +|.++.
T Consensus 3 ~~Ly~~~~sp~~~~v~~~L~~~gi~------------~e~~~v~~~~~~---------~~~~~~~~~~P~g~--vP~L~~ 59 (209)
T 1axd_A 3 MKLYGAVMSWNLTRCATALEEAGSD------------YEIVPINFATAE---------HKSPEHLVRNPFGQ--VPALQD 59 (209)
T ss_dssp EEEESCTTCTTHHHHHHHHHHHTCC------------EEEECCCTTTTG---------GGSHHHHTTCTTCC--SCEEEE
T ss_pred eEEEeCCCCchHHHHHHHHHhcCCC------------CEEEeccccccC---------cCChHHHHhCcCCC--CCeEEE
Confidence 6899999999999888888876542 222222221111 12233443333344 899999
Q ss_pred cCeEeccCCChhhHHHHHHcC
Q 023845 126 QGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~~~ 146 (276)
||.... +...+...|.+.
T Consensus 60 ~g~~l~---eS~aI~~yL~~~ 77 (209)
T 1axd_A 60 GDLYLF---ESRAICKYAARK 77 (209)
T ss_dssp TTEEEE---SHHHHHHHHHHH
T ss_pred CCEEEe---cHHHHHHHHHHh
Confidence 886543 346666666653
No 316
>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5
Probab=26.70 E-value=78 Score=25.37 Aligned_cols=74 Identities=19% Similarity=0.215 Sum_probs=44.0
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
+.||....|++|-...-+|.++.-.+ .+ ..|+.++ . ..+ ..|.+...... +|.++.
T Consensus 1 ~~Ly~~~~s~~~~~v~~~L~~~gi~~-----e~----~~v~~~~----------~--~~~-~~~~~~nP~g~--vP~L~~ 56 (210)
T 1v2a_A 1 MDYYYSLISPPCQSAILLAKKLGITL-----NL----KKTNVHD----------P--VER-DALTKLNPQHT--IPTLVD 56 (210)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCC-----EE----EECCTTC----------H--HHH-HHHHHHCTTCC--SCEEEE
T ss_pred CeEEeCCCCccHHHHHHHHHHcCCCc-----EE----EECCccc----------c--hhh-HHHHHhCCCCC--cCeEEE
Confidence 47899998888877777777665422 11 2233211 1 233 45666555555 899998
Q ss_pred cCeEeccCCChhhHHHHHHcC
Q 023845 126 QGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~~~ 146 (276)
||.... +...+...|.+.
T Consensus 57 ~g~~l~---eS~aI~~yL~~~ 74 (210)
T 1v2a_A 57 NGHVVW---ESYAIVLYLVET 74 (210)
T ss_dssp TTEEEE---SHHHHHHHHHHH
T ss_pred CCEEEE---cHHHHHHHHHHH
Confidence 886543 346666666653
No 317
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=25.76 E-value=48 Score=26.79 Aligned_cols=75 Identities=9% Similarity=0.149 Sum_probs=45.4
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
+.||...+|++|=...-+|..+.-.+ .+ ..|++++ . ..+...|.+...... +|.++.
T Consensus 1 m~Ly~~~~s~~~~~v~~~L~~~gi~y-----e~----~~v~~~~----------~--~~~~~~~~~~~P~g~--vP~L~~ 57 (219)
T 3f6d_A 1 MDFYYLPGSAPCRAVQMTAAAVGVEL-----NL----KLTNLMA----------G--EHMKPEFLKLNPQHC--IPTLVD 57 (219)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCC-----EE----EECCTTT----------T--GGGSHHHHHHCTTCC--SCEEEC
T ss_pred CEEEeCCCCCchHHHHHHHHHcCCCc-----eE----EEccCcc----------c--ccCCHHHHhhCCCCc--cCeEEe
Confidence 46899999888888877888776532 11 2334322 1 122234555555555 999999
Q ss_pred -cCeEeccCCChhhHHHHHHcC
Q 023845 126 -QGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 126 -nG~~~~~g~~~~~~~~~i~~~ 146 (276)
||.... +...+...|.+.
T Consensus 58 ~~g~~l~---eS~aI~~yL~~~ 76 (219)
T 3f6d_A 58 EDGFVLW---ESRAIQIYLVEK 76 (219)
T ss_dssp TTSCEEE---SHHHHHHHHHHH
T ss_pred CCCCEEE---cHHHHHHHHHHh
Confidence 776543 346666666654
No 318
>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5
Probab=24.76 E-value=72 Score=25.60 Aligned_cols=75 Identities=11% Similarity=0.138 Sum_probs=44.0
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEEE
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLVF 125 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~vV 125 (276)
+.||+..+|++|-...-+|.++.-.+ .+ .+|+.++. ..+...|.+...... +|.++.
T Consensus 1 ~~Ly~~~~sp~~~~v~~~L~~~gi~~-----e~----~~v~~~~~------------~~~~~~~~~~~P~g~--vP~L~~ 57 (209)
T 1pn9_A 1 MDFYYLPGSAPCRAVQMTAAAVGVEL-----NL----KLTDLMKG------------EHMKPEFLKLNPQHC--IPTLVD 57 (209)
T ss_dssp CEEEECTTCHHHHHHHHHHHHTTCCC-----EE----EECCGGGT------------GGGSHHHHHHCTTCC--SSEEEE
T ss_pred CeEEeCCCCccHHHHHHHHHHcCCCc-----EE----EEecccCC------------CcCCHHHHhhCCCCC--CCEEEE
Confidence 36899999888887777777654422 11 23443221 112234555444455 899998
Q ss_pred cCeEeccCCChhhHHHHHHcC
Q 023845 126 QGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 126 nG~~~~~g~~~~~~~~~i~~~ 146 (276)
||.... +...+...|.+.
T Consensus 58 ~g~~l~---eS~aI~~yL~~~ 75 (209)
T 1pn9_A 58 NGFALW---ESRAIQIYLAEK 75 (209)
T ss_dssp TTEEEE---SHHHHHHHHHHH
T ss_pred CCEEEE---eHHHHHHHHHHh
Confidence 886543 346666666653
No 319
>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A
Probab=24.05 E-value=76 Score=25.65 Aligned_cols=72 Identities=11% Similarity=0.108 Sum_probs=44.3
Q ss_pred EEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE-
Q 023845 46 VELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV- 124 (276)
Q Consensus 46 VElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v- 124 (276)
+.||+..+|+.|-.+.-+|.++.-.+ .+ ..|++.+ .+ .+.+...... +|.++
T Consensus 4 ~~Ly~~~~sp~~~~v~~~l~~~gi~~-----~~----~~v~~~~---------~~-------~~~~~~p~~~--vP~l~~ 56 (218)
T 3ir4_A 4 MKLYIYDHCPFCVKARMIFGLKNIPV-----EL----NVLQNDD---------EA-------TPTRMIGQKM--VPILQK 56 (218)
T ss_dssp CEEEECTTCHHHHHHHHHHHHHTCCC-----EE----EECCTTC---------CH-------HHHHHHSSSC--SCEEEC
T ss_pred EEEEcCCCCchHHHHHHHHHHcCCce-----EE----EECCCcc---------hh-------hhhhcCCCce--eeeEEE
Confidence 57999999999999988888876532 11 2233211 11 1123344455 89999
Q ss_pred EcCeEeccCCChhhHHHHHHcCC
Q 023845 125 FQGRVQCQGNDQDGMLSAIANAP 147 (276)
Q Consensus 125 VnG~~~~~g~~~~~~~~~i~~~~ 147 (276)
.||.... +...+...|.+..
T Consensus 57 ~~g~~l~---eS~aI~~yL~~~~ 76 (218)
T 3ir4_A 57 DDSRYLP---ESMDIVHYVDNLD 76 (218)
T ss_dssp TTSCEEE---CHHHHHHHHHHTT
T ss_pred eCCeEee---CHHHHHHHHHHhC
Confidence 6675432 3466777777654
No 320
>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}
Probab=24.04 E-value=67 Score=26.34 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=44.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceEE
Q 023845 45 LVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQLV 124 (276)
Q Consensus 45 vVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~v 124 (276)
.+.||...+|+.|=...-+|..+.-. |.....|... ...+...|.+...... +|.++
T Consensus 23 m~~Ly~~~~sp~~~~vr~~L~~~gi~------------ye~~~v~~~~---------~~~~~~~~~~~~P~g~--vP~L~ 79 (229)
T 4iel_A 23 MLHILGKIPSINVRKVLWLCTELNLP------------FEQEDWGAGF---------RTTNDPAYLALNPNGL--VPVIK 79 (229)
T ss_dssp CEEEESCTTCHHHHHHHHHHHHHTCC------------EEEECCC----------------CHHHHTTCTTCC--SCEEE
T ss_pred eEEEecCCCCcchHHHHHHHHHCCCC------------cEEEEecCCc---------CCcCCHHHHhcCCCCC--CCEEE
Confidence 48999999999988888888876543 2222212110 0112233444333344 89999
Q ss_pred EcCeEeccCCChhhHHHHHHcC
Q 023845 125 FQGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 125 VnG~~~~~g~~~~~~~~~i~~~ 146 (276)
.||.... +...+...|.+.
T Consensus 80 ~~g~~l~---eS~aI~~yL~~~ 98 (229)
T 4iel_A 80 DDGFVLW---ESNTIIRYLANR 98 (229)
T ss_dssp ETTEEEE---CHHHHHHHHHHH
T ss_pred ECCEEEE---eHHHHHHHHHHh
Confidence 9986543 346676677654
No 321
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=23.40 E-value=85 Score=24.68 Aligned_cols=36 Identities=22% Similarity=0.403 Sum_probs=27.9
Q ss_pred HHHHHHhCCCCCCcceEEEcCeEeccCC--ChhhHHHHHH
Q 023845 107 KAYVEALNLDTMFTPQLVFQGRVQCQGN--DQDGMLSAIA 144 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vVnG~~~~~g~--~~~~~~~~i~ 144 (276)
+.+.+..|... +|-++|||+....|+ +.+++...+.
T Consensus 62 ~~~L~~~G~~~--LP~~~VDGevv~~G~yPt~eEl~~~lg 99 (110)
T 3kgk_A 62 KAFIEASGAEG--LPLLLLDGETVMAGRYPKRAELARWFG 99 (110)
T ss_dssp HHHHHHHCGGG--CCEEEETTEEEEESSCCCHHHHHHHHT
T ss_pred HHHHHHcCccc--CCEEEECCEEEEeccCCCHHHHHHHhC
Confidence 56677789888 999999999999887 3566665543
No 322
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=21.95 E-value=82 Score=24.59 Aligned_cols=34 Identities=12% Similarity=0.248 Sum_probs=25.5
Q ss_pred HHHHHHhCCCCCCcceEEEcCeEeccCC--ChhhHHHH
Q 023845 107 KAYVEALNLDTMFTPQLVFQGRVQCQGN--DQDGMLSA 142 (276)
Q Consensus 107 ~~Y~~~~g~~~vYTPq~vVnG~~~~~g~--~~~~~~~~ 142 (276)
+.+.+..|... +|-++|||+....|. ..+++...
T Consensus 65 ~~~L~~~G~~~--LP~~~VDGevv~~G~yPt~eEl~~~ 100 (106)
T 3ktb_A 65 NDFLQKHGADA--LPITLVDGEIAVSQTYPTTKQMSEW 100 (106)
T ss_dssp HHHHHTTCGGG--CSEEEETTEEEECSSCCCHHHHHHH
T ss_pred HHHHHHcCccc--CCEEEECCEEEEeccCCCHHHHHHH
Confidence 45566778777 999999999998886 24555544
No 323
>1dxs_A P53-like transcription factor; P73 SAM-like domain, gene regulation, P53 P63 homologue, sterIle alpha motif, tumour supressor; 2.54A {Homo sapiens} SCOP: a.60.1.2 PDB: 1cok_A
Probab=20.86 E-value=22 Score=26.67 Aligned_cols=13 Identities=23% Similarity=0.600 Sum_probs=9.7
Q ss_pred EEEecCCCCCCCH
Q 023845 46 VELFSSQGCKTSP 58 (276)
Q Consensus 46 VElFTSqGCssCP 58 (276)
+---|+.||++|=
T Consensus 10 ~s~Lt~LGc~~~I 22 (80)
T 1dxs_A 10 VSFLTGLGCPNCI 22 (80)
T ss_dssp HHHHHHTTCTTSH
T ss_pred HHHHHhcCchHHH
Confidence 3345889999994
No 324
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}
Probab=20.77 E-value=1.4e+02 Score=23.90 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=36.4
Q ss_pred EEEecCC--CCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCcceE
Q 023845 46 VELFSSQ--GCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFTPQL 123 (276)
Q Consensus 46 VElFTSq--GCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYTPq~ 123 (276)
+.||+.. .|+.|=...-+|.++.-.+ .++ .|+.++. ..+...|.+...... +|.+
T Consensus 7 ~~Ly~~~~~~s~~~~~v~~~l~~~gi~~-----e~~----~v~~~~~------------~~~~~~~~~~nP~g~--vP~L 63 (215)
T 3bby_A 7 ITLWSDAHFFSPYVLSAWVALQEKGLSF-----HIK----TIDLDSG------------EHLQPTWQGYGQTRR--VPLL 63 (215)
T ss_dssp EEEEEETTSCCHHHHHHHHHHHHHTCCC-----EEE----EEC------------------------------C--CCEE
T ss_pred EEEEecCCCCCcHHHHHHHHHHHcCCCC-----EEE----EecCccc------------cccCHHHHhhCCCCC--CCEE
Confidence 6899987 6777766666677665432 222 2332210 011122333333334 8999
Q ss_pred EEcCeEeccCCChhhHHHHHHcC
Q 023845 124 VFQGRVQCQGNDQDGMLSAIANA 146 (276)
Q Consensus 124 vVnG~~~~~g~~~~~~~~~i~~~ 146 (276)
+.||.... +...+...|.+.
T Consensus 64 ~~~g~~l~---eS~aI~~yL~~~ 83 (215)
T 3bby_A 64 QIDDFELS---ESSAIAEYLEDR 83 (215)
T ss_dssp EETTEEEE---SHHHHHHHHHHH
T ss_pred EeCCeEee---cHHHHHHHHHHh
Confidence 98886443 346677777654
No 325
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=20.35 E-value=2.2e+02 Score=23.44 Aligned_cols=67 Identities=7% Similarity=-0.015 Sum_probs=41.6
Q ss_pred CCceEEEEecCCCCCCCHHHHHHHHHhcccCCCCCCCEEEEEEeeecccCCCCCCCCCCccccHHHHHHHHHhCCCCCCc
Q 023845 41 GGAVLVELFSSQGCKTSPEAEILVSRLGRGDFELGVPVIVLAYHVDYWDYMGWKDPYGSSQWTVRQKAYVEALNLDTMFT 120 (276)
Q Consensus 41 ~~~vvVElFTSqGCssCP~Ad~~l~~l~~~~~~~~~~VIaLa~hVdYWDylGWkD~fa~~~~t~Rq~~Y~~~~g~~~vYT 120 (276)
+.+.++=+|....|..|..-...+.++++++ ..++.-+....+ ...| ....+.+|+..--.
T Consensus 130 ~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~---k~~i~F~~vd~~------------~~~~----~~~l~~fgl~~~~~ 190 (227)
T 4f9z_D 130 VIQIHLLLIMNKASPEYEENMHRYQKAAKLF---QGKILFILVDSG------------MKEN----GKVISFFKLKESQL 190 (227)
T ss_dssp SCCEEEEEEECTTSTTHHHHHHHHHHHHHHT---TTTCEEEEEETT------------SGGG----HHHHHHTTCCGGGC
T ss_pred CCceEEEEEEcCCcchHHHHHHHHHHHHHHh---hCCEEEEEeCCc------------cHhH----HHHHHHcCCCcccC
Confidence 3356666788888999988777888888765 445433322221 0112 12457899885458
Q ss_pred ceEEEc
Q 023845 121 PQLVFQ 126 (276)
Q Consensus 121 Pq~vVn 126 (276)
|+++|-
T Consensus 191 P~~~i~ 196 (227)
T 4f9z_D 191 PALAIY 196 (227)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 987763
No 326
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=20.31 E-value=36 Score=27.80 Aligned_cols=24 Identities=4% Similarity=-0.208 Sum_probs=10.1
Q ss_pred eEEEEecCCCCCCCHHHHHHHHHh
Q 023845 44 VLVELFSSQGCKTSPEAEILVSRL 67 (276)
Q Consensus 44 vvVElFTSqGCssCP~Ad~~l~~l 67 (276)
.+.-.|.+.-|-..-+..+.|.++
T Consensus 11 ~~f~D~~CP~C~~~~~~~~~l~~~ 34 (216)
T 2in3_A 11 WYIADPMCSWCWGFAPVIENIRQE 34 (216)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCchhhcchHHHHHHHhc
Confidence 344444444444443333334333
No 327
>4adn_A FAR1; antibiotic resistance; 1.65A {Staphylococcus aureus} PDB: 4ado_A
Probab=20.06 E-value=14 Score=32.78 Aligned_cols=10 Identities=20% Similarity=0.913 Sum_probs=8.3
Q ss_pred cCCCCCCCCC
Q 023845 89 DYMGWKDPYG 98 (276)
Q Consensus 89 DylGWkD~fa 98 (276)
|||||.|+=+
T Consensus 127 ~yLGW~D~~~ 136 (222)
T 4adn_A 127 SFVGWNELAS 136 (222)
T ss_dssp SEEEEEEGGG
T ss_pred ceEeeecCCC
Confidence 7999999744
Done!