Your job contains 1 sequence.
>023847
MDPPLVNESSFSAANPSSYSLAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSME
ESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAE
VEASSAAGNKPAESSKPSEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV
PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAF
DATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023847
(276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 678 1.1e-66 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 623 7.1e-61 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 518 9.5e-50 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 464 5.0e-44 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 362 3.5e-38 2
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 405 8.9e-38 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 384 1.5e-35 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 381 3.1e-35 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 379 5.1e-35 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 373 2.2e-34 1
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 373 2.2e-34 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 373 2.2e-34 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 370 4.6e-34 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 369 5.8e-34 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 347 1.3e-31 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 337 1.4e-30 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 335 2.3e-30 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 334 3.0e-30 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 331 6.2e-30 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 331 6.2e-30 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 330 7.9e-30 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 218 1.5e-29 2
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 325 2.7e-29 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 334 2.9e-29 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 289 1.1e-27 2
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 301 9.4e-27 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 298 1.9e-26 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 223 2.4e-18 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 194 1.1e-17 2
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 211 3.2e-17 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 218 3.6e-17 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 210 4.1e-17 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 215 8.5e-17 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 209 1.8e-16 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 201 3.7e-16 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 193 3.1e-15 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 186 1.4e-14 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 151 5.7e-14 2
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 180 6.2e-14 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 181 1.3e-12 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 180 3.1e-12 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 179 5.4e-12 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 168 2.2e-11 2
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 170 9.2e-11 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 168 1.7e-10 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 149 1.8e-10 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 138 2.2e-10 2
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 164 5.0e-10 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 163 5.1e-10 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 161 5.4e-10 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 153 5.6e-10 2
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 161 5.9e-10 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 152 7.0e-10 2
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 163 7.9e-10 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 161 9.5e-10 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 147 2.6e-09 2
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 156 3.7e-09 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 157 3.9e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 154 4.0e-09 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 147 5.4e-09 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 154 9.1e-09 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 149 1.0e-08 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 136 1.5e-08 2
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 139 2.0e-08 2
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 145 3.1e-08 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 134 3.4e-08 2
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 146 4.2e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 147 5.9e-08 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 141 1.1e-07 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 144 1.2e-07 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 147 1.3e-07 2
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 140 2.4e-07 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 138 3.9e-07 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 135 6.1e-07 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 123 7.0e-07 2
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 131 9.8e-07 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 131 1.2e-06 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 130 1.3e-06 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 138 1.4e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 130 1.5e-06 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 133 1.6e-06 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 130 1.8e-06 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 134 2.0e-06 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 120 2.9e-06 2
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 124 3.6e-06 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 129 5.2e-06 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 126 7.4e-06 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 123 2.7e-05 2
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 120 3.1e-05 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 115 4.8e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 122 5.0e-05 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 120 5.1e-05 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 124 5.2e-05 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 121 5.9e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 120 7.3e-05 1
TAIR|locus:2195291 - symbol:AIF4 "ATBS1 Interacting Facto... 113 0.00012 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 103 0.00016 2
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 96 0.00018 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 96 0.00018 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 112 0.00021 2
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 155/284 (54%), Positives = 183/284 (64%)
Query: 1 MDPPLVNEXXXXXXXXXXXXLAEIWPFPINNGGAGDAGLRMG-NMGHGF--GESSALRDG 57
MDPPLVN+ L+EIWPFP+N+ A +GLR+ N G F E S +D
Sbjct: 1 MDPPLVNDSSFSAANPSSYTLSEIWPFPVND--AVRSGLRLAVNSGRVFTRSEHSGNKDV 58
Query: 58 SM-EESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
S EESTVT+ + G RK RDL+SED+SSK+VS++SS N+L +S K K GS++ NG
Sbjct: 59 SAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGNELKESGDKKRKLCGSESGNG 118
Query: 117 S---KAEVEASSAAGNXXXXXXXXXXXX-XDYIHVRARRGQATDSHSLAERARREKISER 172
+ E E SS G DYIHVRARRGQATD HSLAERARREKISE+
Sbjct: 119 DGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEK 178
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHP 232
M LQD++PGCNK+IGKALVLDEIINYIQSLQRQVEFLSMKLE VNS + PTI F
Sbjct: 179 MTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEVVNSGASTGPTIGVFPS 238
Query: 233 KDLGEQAFDATGMIFGSQTAREYAQGSQQDWLHMQVGGSFERAT 276
DLG D I+ Q A E + SQ +WLHMQV G+F R T
Sbjct: 239 GDLGTLPIDVHRTIYEQQEANE-TRVSQPEWLHMQVDGNFNRTT 281
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 148/267 (55%), Positives = 177/267 (66%)
Query: 22 AEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCG---RKRRD 78
AE+W P GG G G G G G E++A G E+S + GGG G R++R+
Sbjct: 9 AELWRTPYLGGGGGGGG---G--GRGL-EAAA--SGVTEQSNGSRGGGGGGGAGRRRQRE 60
Query: 79 LSS-EDESSKIVSTTSSAN---DLNDSNGKWMKTSGSKNENGS---KAEVEASSAAGNXX 131
+ ED+SS+IVST+ DL DS K K S S +N S +AE ++ +A+ +
Sbjct: 61 APALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGD 120
Query: 132 XXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA
Sbjct: 121 QNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAS 180
Query: 192 VLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD-ATGMIFGSQ 250
VLDEIINYIQ+LQRQVEFLSMKLEAVN+ +N IE F PKD G Q ++ A G+ F Q
Sbjct: 181 VLDEIINYIQALQRQVEFLSMKLEAVNAHVN--NGIEAFPPKDFGAQVYNTAPGLTFDPQ 238
Query: 251 TAREYAQGSQ-QDWLHMQVGGSFERAT 276
T REYAQGS +WLHMQ+GG++ER T
Sbjct: 239 TPREYAQGSTPSEWLHMQIGGTYERVT 265
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 133/259 (51%), Positives = 156/259 (60%)
Query: 46 HGFGESSALRD-GSMEESTVTEQSGGGCGRKR--RDLSSEDES-SKIVSTTSSAN----- 96
H F SS + D GS + GGG GR+R D ED+ SK+VST++++
Sbjct: 19 HHFEASSVVTDQGS------GSRGGGGSGRRRPRSDAGPEDDDLSKVVSTSAASGGGGGG 72
Query: 97 --DLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXX----XXDYIHVRAR 150
D + K +K S ++N S EA + +GN DYIHVRAR
Sbjct: 73 GQDSDAPEAKRLKPMKSSDKNDS-LRTEAGTDSGNSSKAADKNATPPEPPKQDYIHVRAR 131
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF- 209
RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKA VLDEIINYIQSLQ QVEF
Sbjct: 132 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
Query: 210 -----------LSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFD-ATGMIFGSQTAREYAQ 257
LSMKLEAVNS M I F KD G Q ++ A G+ F QT RE+AQ
Sbjct: 192 FKYLIELFLQFLSMKLEAVNSHM--INGIVAFPSKDFGAQPYNTAAGLTFDPQTTREFAQ 249
Query: 258 GSQQDWLHMQVGGSFERAT 276
GS +WLHMQ+G ++ER T
Sbjct: 250 GSTSEWLHMQIGNAYERVT 268
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 123/222 (55%), Positives = 141/222 (63%)
Query: 21 LAEIWPFPINN-GGAGDAGLRMGNMGHGFGES---SALRDGSMEESTVTEQS--GGGCGR 74
LAEIW FP+N AGD+ R + FG++ +A S Q+ G G
Sbjct: 15 LAEIWQFPLNGVSTAGDSSRRSFVGPNQFGDADLTTAANGDPARMSHALSQAVIEGISGA 74
Query: 75 -KRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXX 133
KRR+ E +S+KIVST + S G+ + + +G KAE E+ G
Sbjct: 75 WKRRE--DESKSAKIVSTIGA------SEGENKRQKIDEVCDG-KAEAES---LGTETEQ 122
Query: 134 XXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL
Sbjct: 123 KKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 182
Query: 194 DEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 235
DEIINYIQSLQRQVEFLSMKLEAVNSRMN P IE F PK++
Sbjct: 183 DEIINYIQSLQRQVEFLSMKLEAVNSRMN--PGIEVFPPKEV 222
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 362 (132.5 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 72/93 (77%), Positives = 82/93 (88%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
DYIHVRARRGQATDSHSLAER RREKISERMK+LQDLVPGCNKV GKAL+LDEIINY+QS
Sbjct: 254 DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS 313
Query: 203 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 235
LQRQVEFLSMKL +VN+R++ ++ KD+
Sbjct: 314 LQRQVEFLSMKLSSVNTRLDFN--MDALLSKDI 344
Score = 63 (27.2 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 26/95 (27%), Positives = 39/95 (41%)
Query: 26 PFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDES 85
PFPINN +M + S + + +S G RKR+ S ++
Sbjct: 163 PFPINNEPPITTNEKMPRVS----SSPVFKP--LASHVPAGESSGELSRKRKTKSKQNSP 216
Query: 86 SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAE 120
S VS++ + DS+ K K S ENG K +
Sbjct: 217 SA-VSSSKEIEEKEDSDPKRCKKS---EENGDKTK 247
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 106/254 (41%), Positives = 136/254 (53%)
Query: 26 PFPINNGGAGDA--GLRMGNMGH----GFGESSALRDGSMEESTVTEQSGGGCGRKRRDL 79
P+ + GDA G G M H G ++ +E +E +GG C K D
Sbjct: 122 PYGAADQAMGDAFGGTAEGLMDHHRNVGNDKAEEFAGNGHDEVPSSEVAGGDCSSKGSDS 181
Query: 80 SSEDESSKIVSTTS--SANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXX 137
++++ T S+N +DS + + S K E S A + G
Sbjct: 182 KKRRRPNEVMGTDQVHSSNLPSDSANESVH-SKDKGEESSPATTNGGKSKGKGAKETSES 240
Query: 138 XXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
+YIHVRARRGQAT+SHSLAER RREKISERMK+LQDLVPGC+KV GKA++LDEII
Sbjct: 241 QKE--EYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEII 298
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGE-QAFDATGMIFGSQTAREYA 256
NY+QSLQRQVEFLSMKL VN R++L IEG KDL ++ + F +
Sbjct: 299 NYVQSLQRQVEFLSMKLATVNPRLDLN--IEGLLSKDLLRFPGVPSSSIGFSPEMMHPQL 356
Query: 257 QGSQQDWLHMQVGG 270
Q SQ +H G
Sbjct: 357 QLSQPGLIHGGTAG 370
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 95/235 (40%), Positives = 132/235 (56%)
Query: 27 FPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESS 86
F + + GA A M +G+ ESS + D + + + + ++R S + +
Sbjct: 152 FGLPDAGAAGASKEM-ELGNTRDESS-VSDPAPGGAEIPPKGASDGNARKRKASGKGKGK 209
Query: 87 KIVSTTSSANDLNDSNGKWMKTSGSKN----ENGSKAEVEASSAAGNXXXXXXXXXXXX- 141
+TS+A + DS+GK K++ N EN K + S++
Sbjct: 210 DSPMSTSAAKE--DSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSSKP 267
Query: 142 ----XDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 197
DYIHVRARRG+ATDSHSLAER RREKIS+RMK+LQDLVPGCNKV+GKA++LDEII
Sbjct: 268 PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEII 327
Query: 198 NYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 252
NY+QSLQRQVEFLSMKL VN +++ + KD+ + F +T+
Sbjct: 328 NYVQSLQRQVEFLSMKLATVNPQLDFN-NLPNLLAKDMHQSCSPLQSSHFPLETS 381
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 93/176 (52%), Positives = 112/176 (63%)
Query: 50 ESSALRDGSMEESTVTEQSGGGCGRKRRDLSSED--ESSKIVSTTSSANDLNDSNG--KW 105
+SS L S+ + T +S RKR+ + S + ES S T+S + ++ NG K
Sbjct: 94 KSSLLDPDSVSDRVHTTKSNS---RKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKG 150
Query: 106 MKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERAR 165
K S SK VE + G+ DYIHVRARRGQATDSHSLAERAR
Sbjct: 151 GKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPK-DYIHVRARRGQATDSHSLAERAR 209
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
REKISERM +LQDLVPGCN++ GKA++LDEIINY+QSLQRQVEFLSMKL VN RM
Sbjct: 210 REKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM 265
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 96/212 (45%), Positives = 121/212 (57%)
Query: 42 GNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDS 101
G G GE++ D S +E ++ ++GG + +S S K + +
Sbjct: 153 GEKQQGDGETTHAVDSSSKELSMPGRNGGAGHDEGTRVSC---SKKRKRSGQDGGVKHAE 209
Query: 102 NGKWMKTSGS--KNENGSKAEVEASSAAGNXXXXXXXXXXXXX---DYIHVRARRGQATD 156
G+ + T GS KNE+ K E + SS A DYIHVRARRGQAT+
Sbjct: 210 GGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNAGSPKEDYIHVRARRGQATN 269
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQRQVEFLSMKL +
Sbjct: 270 SHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAS 329
Query: 217 VNSRMNLTPTIEGFHPKDLGEQAFDATGMIFG 248
VN ++ IE KD+ + FG
Sbjct: 330 VNPTLDFN--IERILSKDIFQCRGTTASSAFG 359
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 103/250 (41%), Positives = 140/250 (56%)
Query: 32 GGAGDAGL------RMGNM-GHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDE 84
GGAG AGL G+ G G E+S++ D + S+ + + +KR+ ++
Sbjct: 76 GGAG-AGLFGMPPPAPGDFAGGGSREASSVSDPA---SSAMKDAAANA-KKRKSTAAAAA 130
Query: 85 SSKIVSTTSSANDLNDSNGKWMKTSGSKNEN---------GSKAEVEASSAAGNXXXXXX 135
++K + +S+GK KT + E+ GS + VE G
Sbjct: 131 AAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGK 190
Query: 136 XXXXXX--XDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
DY+HVRARRGQATDSHSLAER RRE+IS+RMK+LQDLVPGCNKVIGKAL+L
Sbjct: 191 NAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 250
Query: 194 DEIINYIQSLQRQVEFLSMKLEAVNSR--MNLTPTIEGFHPKDLGEQAFDATGMIFGSQT 251
DEIINY+QSLQRQVEFLSMKL VN NL PT+ KD+ + + +F ++
Sbjct: 251 DEIINYVQSLQRQVEFLSMKLATVNPLDFSNL-PTLL---QKDMFQACGPSASSVFSLES 306
Query: 252 AREYAQGSQQ 261
+ + ++Q
Sbjct: 307 SNSAFRFAEQ 316
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 101/217 (46%), Positives = 118/217 (54%)
Query: 28 PINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSK 87
PINNG + N G SS ++ VT GG RKR+ +
Sbjct: 181 PINNGNN-----MVNNSGKLTRVSSTPALKALVSPEVTP--GGEFSRKRKSVPKGKSKEN 233
Query: 88 IVSTTSSANDLNDSNGKWMKTSGSKN--ENGSKA-------EVEASSAAGNXXXXXXXXX 138
+ST S + + + K GSK+ E G K E E GN
Sbjct: 234 PISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPE 293
Query: 139 XXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
DYIHVRARRGQATDSHSLAER RREKI ERMK+LQDLVPGCNKV GKAL+LDEIIN
Sbjct: 294 PPK-DYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 235
Y+QSLQRQVEFLSMKL +VN L ++ KD+
Sbjct: 353 YVQSLQRQVEFLSMKLSSVNDT-RLDFNVDALVSKDV 388
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 92/184 (50%), Positives = 109/184 (59%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G++ E T QS GG G+K R+ SS + K +S + S+ N
Sbjct: 212 GNVSEDT---QSSGGNGQKGRETSSNTKKRKRNGQKNS--EAAQSHRSQQSEEEPDNNGD 266
Query: 117 SKAEVEAS-SAAGNXXXXXXXXXXXXXD-----YIHVRARRGQATDSHSLAERARREKIS 170
K E S ++ G D YIHVRARRGQAT+SHSLAER RREKIS
Sbjct: 267 EKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKIS 326
Query: 171 ERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGF 230
ERMK LQDLVPGCNKV GKA++LDEIINY+QSLQRQVEFLSMKL VN +M+ +EG
Sbjct: 327 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFN--LEGL 384
Query: 231 HPKD 234
KD
Sbjct: 385 LAKD 388
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 89/191 (46%), Positives = 115/191 (60%)
Query: 37 AGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAN 96
AGL + M +GE++ D + S T G +++ D ++D + K T + +
Sbjct: 59 AGLNLPMM---YGETTVEGDSRLSISPETTLGTGNFKKRKFDTETKDCNEKKKKMTMNRD 115
Query: 97 DLNDSNGKWMKTSGSKNENGS-----KAEVEASSAAGNXXXXXXXXXXXX--XDYIHVRA 149
DL + G+ K+ ++ NGS K + +A N DYIHVRA
Sbjct: 116 DLVEE-GEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYIHVRA 174
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RRGQATDSHS+AER RREKISERMK LQDLVPGC+K+ GKA +LDEIINY+QSLQRQ+EF
Sbjct: 175 RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEF 234
Query: 210 LSMKLEAVNSR 220
LSMKL VN R
Sbjct: 235 LSMKLAIVNPR 245
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 86/161 (53%), Positives = 103/161 (63%)
Query: 68 SGGGCGRKRRDLSSEDES--SKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASS 125
+ GG D SSE + S ++ T AN N +T SK+ NG A++
Sbjct: 92 NSGGIVEPAGDCSSESKKRRSDEIAGTDHANASNALADSGNETECSKDVNGEVIGPPATA 151
Query: 126 AAGNXXXXXXXXXXXXXD---YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPG 182
AAG Y HVRAR+GQAT++HSLAER RREKISERMK+LQDLVPG
Sbjct: 152 AAGGKSKGKGAKDAGEAQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPG 211
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNL 223
C+KV GKAL+LDEIINY+QSLQRQVEFLSMKL AVN R++L
Sbjct: 212 CSKVTGKALMLDEIINYVQSLQRQVEFLSMKLSAVNPRIDL 252
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 83/179 (46%), Positives = 103/179 (57%)
Query: 69 GGGCGRKRRDLSSEDESSKIVSTTSSANDLNDS--NGKWMKTSGSKNEN-----GSKAEV 121
GGG RKRR ++ ES+ I + M + K G+K +
Sbjct: 78 GGGSFRKRRPDDAKGESNSICKRQRGKQQQQQQPCHPDQMAAAVGKGRPERARPGAKKKA 137
Query: 122 EASSAAGN-XXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLV 180
E +S + DYIHVRARRGQATDSHSLAER RRE+ISERM+ LQ+LV
Sbjct: 138 EVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELV 197
Query: 181 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQA 239
PGCNKV GKA +LDEIINY+QSLQ+QVEFLSMK+ A N +N +E + L + A
Sbjct: 198 PGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFN-IVEDLFGRQLSQAA 255
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 89/201 (44%), Positives = 111/201 (55%)
Query: 37 AGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGR---KRRDLSSEDESSKIVSTTS 93
+G ++ N G S +++ S+ + QS GG G K SS+ SSK
Sbjct: 124 SGSKLDN-GPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSK--KRKR 180
Query: 94 SANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQ 153
D + K K S N +K E + YIH+RARRGQ
Sbjct: 181 IGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPS-----------DSLKDGYIHMRARRGQ 229
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
AT+SHSLAER RREKISERMK LQDLVPGC+KV GKA++LDEIINY+QSLQ Q+EFLSMK
Sbjct: 230 ATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMK 289
Query: 214 LEAVNSRMNLTPTIEGFHPKD 234
L AVN ++ +E KD
Sbjct: 290 LSAVNPVLDFN--LESLLAKD 308
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 82/177 (46%), Positives = 105/177 (59%)
Query: 48 FGESSALRDGSMEESTV-TEQSGGGCGRKRRDLSSEDESS-KIVSTTSSANDLNDSNGKW 105
F +S L D + S + TEQ+G G L S ++ V + D N
Sbjct: 91 FPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRVKAEPAETDSMVENQNQ 150
Query: 106 MKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERAR 165
+SG + E K + SS N Y+HVRARRGQATD+HSLAERAR
Sbjct: 151 SYSSGKRKEREKKVK---SSTKKNKSSVESDKL----PYVHVRARRGQATDNHSLAERAR 203
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
REKI+ RMK+LQ+LVPGC+K+ G ALVLDEIIN++Q+LQRQVE LSM+L AVN R++
Sbjct: 204 REKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRLAAVNPRID 260
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 93/213 (43%), Positives = 119/213 (55%)
Query: 28 PINNGGAGDAGLRMGNMGHG-----FGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSE 82
P + G G G +G+ G GESS + + V S G KRR +E
Sbjct: 97 PFGDCGGGQIGHFLGSDKKGERLIRAGESSHEDHHQVSDDAVLGASPVG---KRRLPEAE 153
Query: 83 DESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXX 142
+ +K + D N + K KN+ SK V S+
Sbjct: 154 SQWNK-KAVEEFQEDPQRGNDQSQKKH--KNDQ-SKETVNKESSQSEEAPKE-------- 201
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
+YIH+RARRGQAT+SHSLAER RREKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QS
Sbjct: 202 NYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQS 261
Query: 203 LQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 235
LQ+QVEFLSMKL VN +N+ I+ KDL
Sbjct: 262 LQQQVEFLSMKLATVNPEINID--IDRILAKDL 292
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 70/150 (46%), Positives = 98/150 (65%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXX 132
G KRR D+ +++ ++S+ + + + + S + + + + S +
Sbjct: 76 GAKRR--KGIDDHIALLNPSASSR-IQNVGDQQTEVSSQQERISMEEDNQKSCSKMQSKE 132
Query: 133 XXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
DY+HVRA+RGQAT+SHSLAER RR+KISERMK+LQDLVPGC+K+ GKA++
Sbjct: 133 DSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVM 192
Query: 193 LDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
LDEIINY+QSLQRQVEFLSMKL VN ++
Sbjct: 193 LDEIINYVQSLQRQVEFLSMKLATVNPELS 222
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 81/173 (46%), Positives = 98/173 (56%)
Query: 71 GCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEAS-SAAGN 129
GC + E + S + + GK K K + ++ E E S N
Sbjct: 66 GCISRTSSFHMEPVKNNGHSRAITLQNKRKPEGKTEKREKKKIK--AEDETEPSMKGKSN 123
Query: 130 XXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GK
Sbjct: 124 MSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGK 183
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDA 242
A +LDEIINY+QSLQ+QVEFLSMKL +N P +E H DL + F A
Sbjct: 184 AGMLDEIINYVQSLQQQVEFLSMKLSVIN------PELE-CHIDDLSAKQFQA 229
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 78/167 (46%), Positives = 96/167 (57%)
Query: 52 SALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGS 111
S + D S E V + G + + S S + GK + +
Sbjct: 45 STVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGK-TRGRKA 103
Query: 112 KNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISE 171
+N N SK VE + DYIHVRARRGQATDSHSLAER RREKISE
Sbjct: 104 RNSNNSKEGVEGRKSKKQKRGSKEEPPT---DYIHVRARRGQATDSHSLAERVRREKISE 160
Query: 172 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
RM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ QVEFLSMKL +++
Sbjct: 161 RMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSIS 207
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 218 (81.8 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 50/129 (38%), Positives = 69/129 (53%)
Query: 57 GSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG 116
G S+V S R + + + D S +++S ++ N + N N NG
Sbjct: 123 GETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPN--------QNNRNG 174
Query: 117 SKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKIL 176
+ + E + + Y+HVRARRGQATDSHSLAERARREKI+ RMK+L
Sbjct: 175 KRKDFEKKGKS-STKKNKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLL 233
Query: 177 QDLVPGCNK 185
Q+LVPGC+K
Sbjct: 234 QELVPGCDK 242
Score = 136 (52.9 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 38/86 (44%), Positives = 53/86 (61%)
Query: 185 KVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLT-PTIEGFHPKDLGEQAFDAT 243
++ G ALVLDEIIN++QSLQRQVE LSM+L AVN R++ TI L + +F+A
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAA 348
Query: 244 GM-IFGSQTAREYAQGSQQDWLHMQV 268
M + Q A E ++Q + H Q+
Sbjct: 349 PMQLAWPQQAIE----TEQSFHHRQL 370
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 69/97 (71%), Positives = 79/97 (81%)
Query: 144 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 203
YIHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKAL+LDEII+Y+QSL
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSL 236
Query: 204 QRQVEFLSMKLEAVNSRM-NLTPTIEGFHPKDLGEQA 239
Q QVEFLSMKL +++ M P I+ HP L + A
Sbjct: 237 QNQVEFLSMKLASLSPLMYEFGPGID-MHPDVLRQLA 272
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 334 (122.6 bits), Expect = 2.9e-29, P = 2.9e-29
Identities = 67/121 (55%), Positives = 86/121 (71%)
Query: 102 NGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLA 161
+G+ + S+ E G + E S + +Y+HVRA+RGQAT+SHSLA
Sbjct: 585 SGEGSSSLHSQEETGEMPQRELSME--HAGEKAGDADASREEYVHVRAKRGQATNSHSLA 642
Query: 162 ERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM 221
ER RREKI+ERMK+LQDLVPGCNK+ GKA++LDEIINY+QSLQRQVEFLSMKL ++ +
Sbjct: 643 ERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISPEL 702
Query: 222 N 222
N
Sbjct: 703 N 703
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 289 (106.8 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 56/77 (72%), Positives = 66/77 (85%)
Query: 143 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQS 202
+ +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QS
Sbjct: 141 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQS 200
Query: 203 LQRQVEFLSMKLEAVNS 219
LQ QVEFLSMKL A +S
Sbjct: 201 LQNQVEFLSMKLTAASS 217
Score = 36 (17.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 78 DLSSEDES--SKIVSTTSSANDLNDSN 102
+LSS+ ++ I S+ + A DLN++N
Sbjct: 6 NLSSDFQTIAMDIYSSITQAADLNNNN 32
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 71/166 (42%), Positives = 100/166 (60%)
Query: 78 DLSSEDESSKIVSTTSSANDLNDSNGKWM--------KTSGSKNENGSKAEVEASSAAGN 129
DL + SS ++ + + D N +N + + G+K E+GSK + S
Sbjct: 30 DLPASTPSSFMLFSNGALVDANHNNSHFFPNLLHGNTRRKGNKEESGSKRRRKRSE---E 86
Query: 130 XXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
D +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G
Sbjct: 87 EEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGM 146
Query: 190 ALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDL 235
A++LD II+Y++SLQ Q+EFLSMKL A ++ +L +++ P D+
Sbjct: 147 AVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN-SLD-IEPTDI 190
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 67/140 (47%), Positives = 91/140 (65%)
Query: 81 SEDESSKIVSTTSSANDLNDSNGKWMKTSGSK-NENGSKAEVEASSAAGNXXXXXXXXXX 139
++ S + + ++S N ++D + TS ++ + NG+ + SS G
Sbjct: 85 TKKRKSLMEAVSTSENSVSDQT---LSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKE 141
Query: 140 XXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINY 199
+ +HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY
Sbjct: 142 R--EVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINY 199
Query: 200 IQSLQRQVEFLSMKLEAVNS 219
+QSLQ QVEFLSMKL A +S
Sbjct: 200 VQSLQNQVEFLSMKLTAASS 219
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 223 (83.6 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 61/152 (40%), Positives = 84/152 (55%)
Query: 101 SNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSL 160
S G M G + + ++ + AS+A G +RARRGQATD HS+
Sbjct: 99 SGGGLMNQQG-QTQTQTQPQASASTATGGTVAAPPQSRTK------IRARRGQATDPHSI 151
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSR 220
AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM SR
Sbjct: 152 AERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM------SR 204
Query: 221 MNLTPTIEGFHPKDLGEQAFDATGMIFGSQTA 252
+ ++ + G ++ M+ GSQTA
Sbjct: 205 LGGAASVSSQISEAGGSHGNASSAMVGGSQTA 236
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 194 (73.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 204
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 205 VKVLSM 210
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 33 GAGDAGLRMGNMGHGFG 49
G+G+ G MG +G G G
Sbjct: 56 GSGEEGSHMGGLG-GSG 71
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 57/132 (43%), Positives = 72/132 (54%)
Query: 83 DESSKIVSTTSSANDLNDS--NGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXX 140
D ++I S N ND+ NG + GS + + S A
Sbjct: 65 DSRNQITMIPLSHNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQA-TASATTGGATAQ 123
Query: 141 XXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYI 200
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII+Y+
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYV 182
Query: 201 QSLQRQVEFLSM 212
+ LQ QV+ LSM
Sbjct: 183 KFLQLQVKVLSM 194
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 218 (81.8 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 67/184 (36%), Positives = 90/184 (48%)
Query: 32 GGAGDAGL----RMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRK-RRDLSSEDESS 86
GG GD GL +G+ G G G+ AL + S +GG G L + +
Sbjct: 140 GGGGDGGLLLPLTLGSGGSG-GDVQALLKAAAANSAGGGDAGGVYGGGFAGSLHQQQQHF 198
Query: 87 KIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIH 146
+ T+ G G G A+ +A +A G
Sbjct: 199 QPHPQTAPTIPTQSFGGGGGGGGGGTASGGGAAQPQAGAAGGGAPAPPRQ---------R 249
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI--GKALVLDEIINYIQSLQ 204
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK++ KA +LDEII+Y++ LQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 205 RQVE 208
QV+
Sbjct: 310 LQVK 313
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/66 (68%), Positives = 53/66 (80%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP NK KA +LDEII Y++ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQ 157
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 158 VKVLSM 163
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 215 (80.7 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 61/115 (53%), Positives = 73/115 (63%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RREKIS+RMK LQ+LVP NK KA +LDEII+Y++ LQ Q
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKT-NKASMLDEIIDYVKFLQLQ 372
Query: 207 VEFLSMK----LEAVNSRMNLTPTIE-GF--HPKDL-GEQAFDA---TGMIFGSQ 250
V+ LSM EAV + T T GF P+ GE+ A TG + G Q
Sbjct: 373 VKVLSMSRLGAAEAVVPLLTETQTESPGFLLSPRSSSGERQAGAGAVTGGLPGDQ 427
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 209 (78.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 53/98 (54%), Positives = 62/98 (63%)
Query: 115 NGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMK 174
+ S E +A+SA GN RARRGQATD HS+AER RREKISERMK
Sbjct: 217 HSSDVEPQANSAPGNSANAKP----------RTRARRGQATDPHSIAERLRREKISERMK 266
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
LQ LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 267 NLQVLVPNSNKA-DKASMLDEIIDYVKFLQLQVKVLSM 303
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ERM+ LQ+LVP NK +A +LDEI++Y++ L+ Q
Sbjct: 133 VRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKT-DRAAMLDEILDYVKFLRLQ 191
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 192 VKVLSM 197
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 193 (73.0 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRARRGQATD HS+AER RRE+I+ER++ LQ+LVP NK +A ++DEI++Y++ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT-DRAAMIDEIVDYVKFLRLQ 202
Query: 207 VEFLSM 212
V+ LSM
Sbjct: 203 VKVLSM 208
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 49/101 (48%), Positives = 61/101 (60%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM------NLTPT 226
M++L++LVPGC+KV G ALVLDEIIN++QSLQRQVE+LSM+L AVN R+ N T
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRVDFGGLDNFLTT 60
Query: 227 ----IEGFHPKDLGEQAFDATGMIFGSQTAREYAQGSQQDW 263
I G + K+ G T G AR Q QQ W
Sbjct: 61 ECGRITGLNYKN-GMDLEQVTWPDMGVHGARNLMQLQQQFW 100
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 151 (58.2 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +ISER++ LQ+LVP +K A +LD ++YI+ LQ+Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 207 VEFLS 211
V+ L+
Sbjct: 129 VKGLN 133
Score = 45 (20.9 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 44 MGHGFGESSALRDGSME------ESTVTEQSGGGCGRKRRDLSSEDESSKIVS 90
M G+ ESS + D ++ +S+ Q+GGG G S SS++ +
Sbjct: 2 MSSGWEESSLMSDTNISGVKRQRDSSEPSQNGGGGGGLAHQFSLPKTSSEMAA 54
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRM-NLTPTIEGFH 231
M++LQ LVPGC+KV GKAL+LDEIINY+QSLQ QVEFLSM++ +++ + +G H
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLH 60
Query: 232 PKDLGEQAFDATGM 245
+ +G +A M
Sbjct: 61 DQKIGGMFQEALAM 74
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 181 (68.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 52/172 (30%), Positives = 86/172 (50%)
Query: 51 SSALRDGSMEESTVTEQSGGGCG----RKRRDLSSEDESSKIVSTTSSANDLNDSNGKWM 106
SS +R+ ME+ +VT CG + D+S + SK + + N + S G
Sbjct: 145 SSGIRETEMEQYSVTTVGPSHCGSNPSQNDLDVSMSHDRSKNIEEKLNPNASSSSGGSSG 204
Query: 107 KTSGS---KNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRA---RRGQATDSHSL 160
+ G + +G + N + + R+ RR +A + H+L
Sbjct: 205 CSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSNQRSGSNRRSRAAEVHNL 264
Query: 161 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ER RR++I+ERMK LQ+L+P C+K KA +LDE I+Y++SLQ Q++ + M
Sbjct: 265 SERRRRDRINERMKALQELIPHCSKT-DKASILDEAIDYLKSLQLQLQVMWM 315
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 180 (68.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 30 NNGGAGDAG--LRMGNMGHGFGES-SALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESS 86
NNG G++G L + S SA + ES +T ++ G + +
Sbjct: 156 NNGRGGESGPLLSKAVVRESTQVSPSATPSAAASESGLTRRTDGTDSSAVAGGGAYNRKG 215
Query: 87 KIVSTTSSANDLNDSNGKWMKTSGSKNE--NGSKAEVEASSAAGNXXXXXXXXXXXXXDY 144
K V+ T+ A ++ ++ + S + E N + + A
Sbjct: 216 KAVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARV 275
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+R +A + H+L+ER RR++I+ERMK LQ+L+P CNK KA +LDE I Y++SLQ
Sbjct: 276 STTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKS-DKASMLDEAIEYMKSLQ 334
Query: 205 RQVEFLSM 212
Q++ +SM
Sbjct: 335 LQIQMMSM 342
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 179 (68.1 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 43/110 (39%), Positives = 64/110 (58%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R ++ + H+L+ER RR++I+E+M+ LQ+L+P CNKV KA +LDE I Y++SLQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKV-DKASMLDEAIEYLKSLQLQVQ 397
Query: 209 FLSMKLEAVNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREYAQG 258
+SM S L P + P +G A M G YA G
Sbjct: 398 IMSMA-----SGYYLPPAV--MFPPGMGHYPAAAAAMAMGM--GMPYAMG 438
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 168 (64.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + + H+L+ER RR++I+E+M+ LQ+L+P CNK I KA +LDE I Y+++LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 210 LSM 212
+SM
Sbjct: 368 MSM 370
Score = 45 (20.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 50 ESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTS 109
E+ + ++ S+V +G G R + ++ S S +DL+D G ++ S
Sbjct: 246 EARKAPEATVATSSVCSGNGAGSDELWRQQKRKCQAQAECSA-SQDDDLDDEPGV-LRKS 303
Query: 110 GSKNENGSK-AEV 121
G+++ S+ AEV
Sbjct: 304 GTRSTKRSRTAEV 316
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 170 (64.9 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 58/189 (30%), Positives = 92/189 (48%)
Query: 38 GLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND 97
G R+ G F S +R+ SM+ + T ++E +S+ VS T +A+D
Sbjct: 141 GGRVDEAGPSF---SVVRE-SMQVGSNTTPPSSSATESCVIPATEGTASR-VSGTLAAHD 195
Query: 98 LNDSNGKWM--KTSGSKNENGSKAE---VEASSAAGNXXXXXXXXXXXXXDYIHVRARRG 152
L GK + + +G+ + KAE V+ A + +R
Sbjct: 196 LG-RKGKAVAVEAAGTPSSGVCKAETEPVQIQPATESKLKAREETHGTEEARGSTSRKRS 254
Query: 153 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE-FLS 211
+ + H+LAER RREKI+E+MK LQ L+P CNK K LD+ I Y++SLQ Q++ +S
Sbjct: 255 RTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQGMMS 313
Query: 212 MKLEAVNSR 220
+ A N++
Sbjct: 314 PMMNAGNTQ 322
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 168 (64.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R +A D H+L+ER RRE+I+ERMK LQ+L+P C K K +L+++I Y++SLQ Q++
Sbjct: 354 KRSRAADMHNLSERRRRERINERMKTLQELLPRCRKT-DKVSMLEDVIEYVKSLQLQIQM 412
Query: 210 LSM 212
+SM
Sbjct: 413 MSM 415
Score = 36 (17.7 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 55 RDGSMEESTVTEQSGGGCGRKR 76
R+ ++ E TE++ G RKR
Sbjct: 334 REETIAEIQGTEEAHGSTSRKR 355
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 149 (57.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K K +LDE I+Y++SLQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKT-DKVSMLDEAIDYLKSLQLQLQM 68
Query: 210 LSM 212
L M
Sbjct: 69 LVM 71
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 138 (53.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
RRE+I+ERMK LQ+LVP NK KA +LDEII+Y++ LQ QV+ LSM
Sbjct: 252 RRERIAERMKALQELVPNANKT-DKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 72 (30.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 14/16 (87%), Positives = 15/16 (93%)
Query: 148 RARRGQATDSHSLAER 163
RARRGQATD HS+AER
Sbjct: 213 RARRGQATDPHSIAER 228
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 164 (62.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+E+++ LQ+LVP CNK KA +LDE I Y++SLQ QV+
Sbjct: 225 RRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKT-DKASILDEAIEYLKSLQMQVQI 283
Query: 210 LSM 212
+ M
Sbjct: 284 MWM 286
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 163 (62.4 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 47/161 (29%), Positives = 84/161 (52%)
Query: 66 EQSGGGCGRKR-------RDLSSEDESSKIV-STTSSANDLNDS-----NGKWMKTSGSK 112
E G C RKR R + ++ES ++ S T+SA+ N S +G+ +KT+ +
Sbjct: 73 ESKDGSCSRKRGYPQEMDRWFAVQEESHRVGHSVTASASGTNMSWASFESGRSLKTARTG 132
Query: 113 NENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISER 172
+ + ++ E G+ RRG+A H+ +ER RR++I++R
Sbjct: 133 DRDYFRSGSETQDTEGDEQETRGEAGRS-------NGRRGRAAAIHNESERRRRDRINQR 185
Query: 173 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
M+ LQ L+P +K K +LD++I +++ LQ QV+F+S++
Sbjct: 186 MRTLQKLLPTASKA-DKVSILDDVIEHLKQLQAQVQFMSLR 225
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 161 (61.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV-E 208
+R +A + H+LAER RREKI+ERMK LQ L+P CNK K +L+++I Y++SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 209 FLSMKLEAVNSRMNLTPTIEGFHPKDLG 236
F+ +N P H +G
Sbjct: 206 FMPHMAMGMNQPPAYIPFPSQAHMAGVG 233
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 153 (58.9 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR KISERM+ LQDLVP + A +LD + YI+ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 207 VEFL 210
V+ L
Sbjct: 364 VKAL 367
Score = 46 (21.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 41 MGNMGHGFGESSALRDGSMEESTVTEQS 68
M +MG GFG S+ + + E S++T +S
Sbjct: 176 MKSMG-GFGGSNVMSTSNTEASSLTPRS 202
Score = 40 (19.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 71 GCGRKRRDLSSEDESSKI-VSTTSSANDL 98
G +K ++ +EDE ++I V+ T++A ++
Sbjct: 84 GTEKKPPEVKTEDEDAEIPVTATATAMEV 112
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 161 (61.7 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A + H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQ 157
Query: 209 FLSMK 213
LSM+
Sbjct: 158 MLSMR 162
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 152 (58.6 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y++ LQRQ
Sbjct: 184 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQ 243
Query: 207 VEFLS 211
++ L+
Sbjct: 244 IQELT 248
Score = 37 (18.1 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 79 LSSEDESSKIVSTTSSANDLNDSN 102
+ E S ++ + SS +D+N N
Sbjct: 151 MKGEQSSGQVPTGVSSMSDMNMEN 174
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 163 (62.4 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
RR +A + H+L+ER RR++I+ERMK LQ+L+P C++ KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRT-DKASILDEAIDYLKSLQMQLQV 311
Query: 210 LSM 212
+ M
Sbjct: 312 MWM 314
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 161 (61.7 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 96 NDLNDSNGKWMKTSGSKNENGSKA-EVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQA 154
N++ ++ +S S +G++ E + S G ++R +A
Sbjct: 139 NNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRA 198
Query: 155 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 214
+ H+L+E+ RR +I+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L+M+
Sbjct: 199 AEVHNLSEKRRRSRINEKMKALQSLIPNSNKT-DKASMLDEAIEYLKQLQLQVQMLTMR- 256
Query: 215 EAVNSRMNLTPTIEGFHPKDLGE 237
+N P HP L +
Sbjct: 257 NGINLHPLCLPGTT-LHPLQLSQ 278
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 147 (56.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA RG ATD SL R RRE+I+ER++ILQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 267 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 325
Query: 208 EFLS 211
+ LS
Sbjct: 326 KLLS 329
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 60 EESTVTEQSGGGCGRKRRDLSS-EDESSKIVS 90
EES +Q GGG D SS ED+ SK ++
Sbjct: 235 EESNCADQDGGG-----EDSSSKEDDPSKALN 261
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 156 (60.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 47/138 (34%), Positives = 75/138 (54%)
Query: 83 DESSKIVSTTSSANDLNDSNGKWMKTSGSKN-ENGSKAEV--------EASSAAGNXXXX 133
D SS I + +S + D +GK G++N E+G++ ++ ++SS A +
Sbjct: 209 DPSSFIDNLSSLKREAED-DGKLFL--GAQNGESGNRMQLLSHHLSLPKSSSTASDMVSV 265
Query: 134 XXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
+RA+RG AT S+AER RR +ISERM+ LQ+LVP +K + +L
Sbjct: 266 DKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDML 325
Query: 194 DEIINYIQSLQRQVEFLS 211
D ++YI+ LQRQ + L+
Sbjct: 326 DLAVDYIKDLQRQYKILN 343
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 157 (60.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 49/164 (29%), Positives = 80/164 (48%)
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIV--STT---SSANDLNDSNGKWMKTSGSKN 113
+E ST+ + S G + DE S V ST +S++ + + + K
Sbjct: 129 VESSTLIDVSAKGPKNVEVTTAPPDEQSAAVGRSTELYFASSSKFSRGTSRDLSCCSLKR 188
Query: 114 ENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRAR-----RGQATDSHSLAERARREK 168
+ G E E++ + N +H R R R ++T+ H L ER RR++
Sbjct: 189 KYGDIEEEESTYLSNNSDDESDDAKTQ----VHARTRKPVTKRKRSTEVHKLYERKRRDE 244
Query: 169 ISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+++M+ LQDL+P C K KA +LDE I Y+++LQ QV+ +SM
Sbjct: 245 FNKKMRALQDLLPNCYKD-DKASLLDEAIKYMRTLQLQVQMMSM 287
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 154 (59.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 30/66 (45%), Positives = 47/66 (71%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
R +R +A + H+L+E+ RR +I+E+MK LQ L+P +K KA +LD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKT-DKASMLDDAIEYLKQLQLQV 85
Query: 208 EFLSMK 213
+ LSM+
Sbjct: 86 QMLSMR 91
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 147 (56.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 54/194 (27%), Positives = 86/194 (44%)
Query: 30 NNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGC---GRKRRDLSSEDESS 86
NN A L + G G S + + + + +T+ G GR ++S+ D
Sbjct: 6 NNNKKMKAPLSFASSRQGSGGLSQISEDGIPD--LTDSIHGAAHHHGRSEENVSTHDHVV 63
Query: 87 KIVSTTS-SANDLNDSNGKWMKTS-GSKNENGSK------AEVEASSAAGNXXXXXXXXX 138
+ S+ S DSN TS G +G+ + E+ A
Sbjct: 64 RSFSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPREMAGVEKYL 123
Query: 139 XXXXDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 196
D + VRA+RG AT S+AER RR +ISE+++ LQ LVP +K + +LD
Sbjct: 124 QMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLA 183
Query: 197 INYIQSLQRQVEFL 210
+++I+ LQ Q++ L
Sbjct: 184 VDHIKGLQSQLQTL 197
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 154 (59.3 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 29/64 (45%), Positives = 46/64 (71%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
++R +A H L+ER RR+KI+E MK LQ+L+P C K ++ +LD++I Y++SLQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKT-DRSSMLDDVIEYVKSLQSQIQ 331
Query: 209 FLSM 212
SM
Sbjct: 332 MFSM 335
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 149 (57.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
VRA+RG AT S+AER RR +IS+R++ LQ+LVP +K A +L+E + Y+++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 207 VEFLS 211
++ L+
Sbjct: 241 IQELT 245
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 136 (52.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
H+L+E+ RR KI+E+MK LQ L+P NK KA +LDE I Y++ LQ QV+ L++
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKT-DKASMLDEAIEYLKQLQLQVQTLAV 151
Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 107 KTSGSKNENGSKAEVEA 123
K SG+K N K ++A
Sbjct: 79 KRSGAKQRNSLKRNIDA 95
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 139 (54.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+TD S+A R RRE+ISER++ILQ LVPG K+ A +LDE I+Y++ L+ QV+ L +
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKTQVQSLE-R 215
Query: 214 LEAVNSRMNLTPT 226
A N PT
Sbjct: 216 AAAANGHRPPPPT 228
Score = 39 (18.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 31 NGGAGDAGLRMGNMGHGFGESSALRDGSMEESTV 64
+GG GD G+ M +AL+ +++ TV
Sbjct: 114 SGGGGDGGVGPAAMREMIFHIAALQPVNIDPETV 147
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 145 (56.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
RA +G ATD SL R RREKI+ER+K LQ+LVP KV + +L+E ++Y++ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQI 226
Query: 208 EFLS 211
+ LS
Sbjct: 227 KLLS 230
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 134 (52.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 207 VEFLSMKLE 215
++ L E
Sbjct: 343 LQNLKKDQE 351
Score = 52 (23.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 19/78 (24%), Positives = 35/78 (44%)
Query: 41 MGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLND 100
+GN G +SS+LR +ST + G+K+ ++ + S+K + S N+
Sbjct: 63 IGNFFTGAADSSSLRS----DSTTCGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNE 118
Query: 101 SNGKWMKTS-GSKNENGS 117
+ + G N +GS
Sbjct: 119 ISQQHKSNDIGGGNSSGS 136
Score = 47 (21.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 80 SSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEV 121
+++ S + STT N N S+G+ K G+ N N S ++
Sbjct: 70 AADSSSLRSDSTTCGVN--NSSDGQ--KQLGNNNNNNSNKDI 107
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 146 (56.5 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 42/139 (30%), Positives = 64/139 (46%)
Query: 73 GRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXX 132
G +R S+E E + A K K + K+ + + S + +
Sbjct: 142 GTNKRKQSAEGEFDGQTRGSKCARKAEPKRAKKAKQTVEKDASVAIPNGSCSISDNDSSS 201
Query: 133 XXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 192
RA RG ATD SL R RRE+I+ER+K LQ+LVP KV + +
Sbjct: 202 SQEVADAGATSKGKSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKV-DISTM 260
Query: 193 LDEIINYIQSLQRQVEFLS 211
L+E ++Y++ LQ Q++ LS
Sbjct: 261 LEEAVHYVKFLQLQIKLLS 279
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 147 (56.8 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 147 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
V +R +A H+ +ER RR+KI++RMK LQ LVP +K KA +LDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265
Query: 207 VEFLS 211
V +S
Sbjct: 266 VSMMS 270
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 141 (54.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R A +H+L E+ RR KI+ER + LQ LVPGC+ +A LD+ I Y++SLQ Q+E
Sbjct: 78 SRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLE 137
Query: 209 FLS 211
S
Sbjct: 138 ATS 140
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/86 (43%), Positives = 52/86 (60%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV---EFL 210
+TD ++A R RRE+ISE++++LQ LVPG K+ A +LDE NY++ L+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANYLKFLRAQVKALENL 334
Query: 211 SMKLEAVNSRMNLTPT-IEGFHPKDL 235
KL+ N + PT FHP L
Sbjct: 335 RPKLDQTNLSFSSAPTSFPLFHPSFL 360
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 147 (56.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 155 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKL 214
T +H++ E+ RREK++ER L+ ++P NK I K +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINK-IDKVSILDDTIEYLQELERRVQELESCR 497
Query: 215 EAVNSRMNLTPTIEGFHPKDLGEQ 238
E+ ++ T T++ P D GE+
Sbjct: 498 ESTDTETRGTMTMKRKKPCDAGER 521
Score = 38 (18.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 61 ESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSAND 97
+S +TE+ GG + + +DE S V + +++D
Sbjct: 273 DSFMTERITGGASQVQSWQLMDDELSNCVHQSLNSSD 309
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/157 (29%), Positives = 75/157 (47%)
Query: 59 MEESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSK 118
+ +S+V G KR+ + + + SA GK K + + E+GS
Sbjct: 132 LADSSVNLLDSIGASNKRK-IQEQGRLDDQTKSRKSAKKAGSKRGK--KAAQCEGEDGSI 188
Query: 119 AEV--EASSAAGNXXXXXXXXXXXXXDYIHVRARRGQ--ATDSHSLAERARREKISERMK 174
A ++ S + + +A+ G ATD SL R RRE+I+ER+K
Sbjct: 189 AVTNRQSLSCCTSENDSIGSQESPVAAKSNGKAQSGHRSATDPQSLYARKRRERINERLK 248
Query: 175 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
ILQ+LVP KV + +L+E ++Y++ LQ Q++ LS
Sbjct: 249 ILQNLVPNGTKV-DISTMLEEAMHYVKFLQLQIKLLS 284
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 138 (53.6 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 49/140 (35%), Positives = 69/140 (49%)
Query: 80 SSEDESS-KIVSTTSSANDLNDSNGKWMKTSGSKNEN-GSKAEVEASSAAGNXX-XXXXX 136
S E SS + S + S N NG W+ SGS N GS+ E + AGN
Sbjct: 127 SFETTSSFGLTSNSMSKPATNHGNGDWLY-SGSTIVNIGSRHESTSPKLAGNKRPFTGEN 185
Query: 137 XXXXXXDYIHVRAR-RGQAT----DSHSLAERARREKISERMKILQDLVPGCNKVIGKAL 191
+ + +AT D SLA + RRE+ISER+K+LQ+LVP KV
Sbjct: 186 TQLSKKPSSGTNGKIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTKV-DLVT 244
Query: 192 VLDEIINYIQSLQRQVEFLS 211
+L++ I Y++ LQ QV+ L+
Sbjct: 245 MLEKAIGYVKFLQVQVKVLA 264
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 135 (52.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 148 RARRGQA-TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+ARR ++H L E+ RR +I+E+ K+LQ LVPGC+K ++ LD I+Y++SLQ+Q
Sbjct: 146 KARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKC-SQSSTLDRTIHYMKSLQQQ 204
Query: 207 VE 208
++
Sbjct: 205 LQ 206
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 123 (48.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 159 SLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
S A + RRE+ISER+K+LQDLVP KV +L++ INY++ LQ QV+ L+
Sbjct: 210 SAAAKVRRERISERLKVLQDLVPNGTKV-DLVTMLEKAINYVKFLQLQVKVLA 261
Score = 49 (22.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 29 INNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRK 75
+ GG DA G SS++ S +++ V SGGGC R+
Sbjct: 38 VGGGGCVDADYYYSWSGSSSSSSSSVL--SFDQAAVGG-SGGGCARQ 81
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 131 (51.2 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
D S+A R RRE+ISER++ILQ LVPG K+ A +LDE I Y++ L+RQ+ L+
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLN 182
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 131 (51.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 215
D S+A R RRE+ISER++ILQ LVPG K+ A +LDE I+Y++ L+ QV+ L
Sbjct: 150 DPQSVAARLRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKSQVQSLERAAA 208
Query: 216 AVNSRMNLTPTIEGFHPKDLGEQ 238
A + + +P L Q
Sbjct: 209 ATGAAAHRAAAFGAAYPAALPMQ 231
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 130 (50.8 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
+A RG A+D SL R RRE+I++R+K LQ LVP KV + +L++ ++Y++ LQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFLQLQI 191
Query: 208 EFLS 211
+ LS
Sbjct: 192 KLLS 195
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 30/87 (34%), Positives = 54/87 (62%)
Query: 153 QATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
+ T +H+L+E+ RREK++ER L+ ++P +K I K +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISK-IDKVSILDDTIEYLQDLQKRVQELES 459
Query: 213 KLEAVNSRMNLTPTIEGFHPKDLGEQA 239
E+ ++ +T ++ P D E+A
Sbjct: 460 CRESADTETRIT-MMKRKKPDDEEERA 485
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 215
D S+A R RRE+ISER++ILQ LVPG K+ A +LDE I+Y++ L++QV+ S++
Sbjct: 128 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQ--SLEEH 184
Query: 216 AVNSRMNLTPTIEG 229
AV + +T G
Sbjct: 185 AVVNGGGMTAVAGG 198
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 133 (51.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/194 (28%), Positives = 87/194 (44%)
Query: 25 WPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVT------EQSGGGCGRKRRD 78
WP P++ G G +G G+ G G G R + E V G G RD
Sbjct: 87 WPPPLSGDGGGGSG--SGSSGTGEGSYIGERCYYVGEPDVPIGLNLLVGDNDGAGVVLRD 144
Query: 79 LSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNE----NGSKAEVEASSAAGNXXXXX 134
+ + +K + DL K + S +N+ +GS ++ E++ + N
Sbjct: 145 AAPQ---AKRRTQAGHGGDLGRQKKK-ARVSDKRNQESMQSGSCSDNESNCSQVNRRKVD 200
Query: 135 XXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLD 194
V ARR AT + SL R RRE+I+ R++ILQ LVP KV + +L+
Sbjct: 201 RVAGGGNGK---VPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKV-DISTMLE 256
Query: 195 EIINYIQSLQRQVE 208
E ++Y++ LQ Q++
Sbjct: 257 EAVHYVKFLQLQIK 270
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 130 (50.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/62 (50%), Positives = 46/62 (74%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 215
D S+A R RRE+ISER++ILQ LVPG K+ A +LDE I+Y++ L++QV+ S++ +
Sbjct: 131 DPQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQ--SLEEQ 187
Query: 216 AV 217
AV
Sbjct: 188 AV 189
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 134 (52.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 106 MKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERAR 165
M + +++G + + +ASSAAG Y + G + D R
Sbjct: 171 MNKDETSDDSGERKKKKASSAAGKSKQASPRGCRSSQPY----RKSGDSIDELFTKFHRR 226
Query: 166 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
R KI+ER + LQ LVPGC+K +A LD+ I Y++SLQ Q++ +S+
Sbjct: 227 RFKITERFRTLQRLVPGCDKS-NQASTLDQTIQYMKSLQHQLKAMSV 272
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 120 (47.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
++D ++A R RRE+ISER+++LQ LVPG K+ A +LDE NY++ L+ Q+ L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKM-DTASMLDEAANYLRFLKSQIREL 426
Score = 54 (24.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 29 INNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQS---------GGGCGRKRRDL 79
++ GGA DA + G +G+ + +M +T T GGGCGRK+R
Sbjct: 185 VDGGGAMDATVFSG-IGNDDVVDAVSATVAMTTATATTSQCERVRGGGGGGGCGRKQRRP 243
Query: 80 SSEDESSKIVSTTSSANDLNDSN 102
+ ++++ + ++A+ + N
Sbjct: 244 GRKRKAAEPTAAAAAADMSSQDN 266
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 124 (48.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 37/105 (35%), Positives = 54/105 (51%)
Query: 108 TSGSKNENGS-KAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARR 166
T+GS+NE+ S K+ S G + D SLA + RR
Sbjct: 156 TTGSRNESLSPKSAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTTSPK-DPQSLAAKNRR 214
Query: 167 EKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
E+ISER+KILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 215 ERISERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 258
Score = 41 (19.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 30 NNGGAGDAGLRMGNMGHGF 48
++GG G + L NM +GF
Sbjct: 103 SSGGGGFSFLEGNNMSYGF 121
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 129 (50.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 67 QSGGGCGRK---RRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEA 123
+SG G G + R ++ + ST+SS + + S + + + + VE
Sbjct: 38 ESGSGTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVET 97
Query: 124 SSAAGNXXXXXXXXXXXXXDYIHVRARRG-QATDSHSLAERARREKISERMKILQDLVPG 182
S N D ++ RR H LAER RR+K++ER+ L L+PG
Sbjct: 98 SLNFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPG 157
Query: 183 CNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMN 222
K KA VL++ I +++ LQ +V+ L + V +M+
Sbjct: 158 LKKT-DKATVLEDAIKHLKQLQERVKKLEEE-RVVTKKMD 195
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 126 (49.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 34/91 (37%), Positives = 53/91 (58%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
++D ++A R RRE++SER+++LQ LVPG +K+ A +LDE +Y++ L+ Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKM-DTATMLDEAASYLKFLKSQLEALET- 361
Query: 214 LEAVNSRMNLTPTIEGFHPKDLGEQAFDATG 244
L N NL G++ A ATG
Sbjct: 362 LGNGNGNGNLLH--HGYYTGSRNATATAATG 390
Score = 41 (19.5 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 32 GGAGDAGLRMGNMGHGFGESSAL 54
G G + + G HG G ++AL
Sbjct: 222 GAGGSSSITFGGGCHGAGAAAAL 244
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 123 (48.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 160 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
+AER RR+K+++R+ +L+ +VP +K+ +A +L + I Y++ L +++ L +LE+ +
Sbjct: 339 MAERRRRKKLNDRLYMLRSVVPKISKM-DRASILGDAIEYLKELLQKINDLQNELESSPA 397
Query: 220 RMNLTPTIEGFHP 232
+L PT FHP
Sbjct: 398 TSSLPPTPTSFHP 410
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 49 GESSALRDGSMEESTVTEQSGGGCGRKR 76
GE S + S STVT G G G+K+
Sbjct: 307 GEDSGAKKESNANSTVT---GDGKGKKK 331
Score = 38 (18.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 20/55 (36%), Positives = 24/55 (43%)
Query: 21 LAEIWPFPINNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRK 75
L E W F GG G A G+M G SS G + T SGGG G++
Sbjct: 61 LDEDWYFDAAGGGGGGAH---GSMMLGL--SSV--HGGIGAGT----SGGGHGQQ 104
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 120 (47.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/142 (27%), Positives = 66/142 (46%)
Query: 73 GRKRR---DLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGN 129
G KR D E + K T ++ ++ S+ + S+ N S + S+ G
Sbjct: 81 GNKRMFPMDEHFEQQQKKPKKKTRTSRSVSSSSTITDYETSSELVNPS---CSSGSSVGE 137
Query: 130 XXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 189
+ R + + D+ SL + RRE+I+ER++ILQ LVP KV
Sbjct: 138 DSIAATDGSVVLKQSDNSRGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTKV-DI 196
Query: 190 ALVLDEIINYIQSLQRQVEFLS 211
+ +L+E + Y++ LQ Q++ LS
Sbjct: 197 STMLEEAVQYVKFLQLQIKLLS 218
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 115 (45.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 165 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
RR++I+++MK LQ LVP +K KA +LDE+I+Y++ LQ QV+ +S
Sbjct: 13 RRDRINQKMKTLQKLVPNSSKT-DKASMLDEVIDYLKQLQAQVQVMS 58
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/57 (43%), Positives = 42/57 (73%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
++D ++A R RRE++S+R+++LQ LVPG NK+ A +LDE +Y++ L+ QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLKSQVQKL 337
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 120 (47.3 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
D SLA + RRE+ISER++ILQ+LVP KV +L++ I+Y++ LQ QV+ L+
Sbjct: 206 DPQSLAAKNRRERISERLRILQELVPNGTKV-DLVTMLEKAISYVKFLQLQVKVLA 260
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 124 (48.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 32/99 (32%), Positives = 55/99 (55%)
Query: 157 SHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
+H ++ER RREK++E IL+ +VP +KV KA +L+E I Y++ L+++V+ L E
Sbjct: 392 NHVISERRRREKLNEMFLILKSIVPSIHKV-DKASILEETIAYLKVLEKRVKELESSSEP 450
Query: 217 VNSRMNLTPTIEGFHPKDLGEQAFDATGMIFGSQTAREY 255
+ R T T + + G++ G+ G RE+
Sbjct: 451 SHQRA--TETGQQRRCEITGKELVSEIGVSGGGDAGREH 487
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 121 (47.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 45/173 (26%), Positives = 77/173 (44%)
Query: 67 QSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMK-------TSGSKNENGSKA 119
Q G G+++ + E + I S + + NDS+ W++ + S +
Sbjct: 92 QLGDDLGQQQAATAMEIDDDVIYSLIRNWD--NDSSSSWIELLDHAIVSPASCFVPWKRT 149
Query: 120 EVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQAT-DSHSLAERARREKISERMKILQD 178
E++ + AG + G + +H ++ER RREK++E IL+
Sbjct: 150 ELDKEAVAGGEAAQRLLKKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKS 209
Query: 179 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM--KLEAVNSRMNLTPTIEG 229
LVP +KV KA +L E I Y++ L+R+V+ L K+ R + TI G
Sbjct: 210 LVPSIDKV-DKASILSETIAYLKELERRVQELESGKKVSRPAKRKPCSETIIG 261
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 120 (47.3 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 28/62 (45%), Positives = 37/62 (59%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
+R H LAER RREK+S+R L +VPG K+ KA VL + I Y++ LQ QV+
Sbjct: 173 SRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKM-DKASVLGDAIKYVKQLQDQVK 231
Query: 209 FL 210
L
Sbjct: 232 GL 233
>TAIR|locus:2195291 [details] [associations]
symbol:AIF4 "ATBS1 Interacting Factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR011598 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000237706 EMBL:AC003114 EMBL:BT003052
EMBL:AK227577 IPI:IPI00526019 PIR:D86225 RefSeq:NP_563839.1
UniGene:At.43282 UniGene:At.73990 ProteinModelPortal:O80482
SMR:O80482 EnsemblPlants:AT1G09250.1 GeneID:837446
KEGG:ath:AT1G09250 TAIR:At1g09250 eggNOG:NOG281435
InParanoid:O80482 OMA:VERKLKI PhylomeDB:O80482
ProtClustDB:CLSN2916989 Genevestigator:O80482 Uniprot:O80482
Length = 207
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 45/156 (28%), Positives = 73/156 (46%)
Query: 74 RKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXX 133
R+R +S +E+ K+VS +A ++ D+ + + S S+A + AS
Sbjct: 65 RQRSSTTSNNETDKLVS--GAAREIRDTADRVLAASARGTTRWSRA-ILASRVRAKLKKH 121
Query: 134 XXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 193
+ ++R+G T+++ R + + ++KIL LVPGC KV L L
Sbjct: 122 RKAKKSTG----NCKSRKG-LTETN----RIKLPAVERKLKILGRLVPGCRKVSVPNL-L 171
Query: 194 DEIINYIQSLQRQV---EFLSMKLEAVNSRMNLTPT 226
DE +YI +L+ QV E L+ L A R LT T
Sbjct: 172 DEATDYIAALEMQVRAMEALAELLTAAAPRTTLTGT 207
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 103 (41.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 19/84 (22%), Positives = 50/84 (59%)
Query: 145 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
+H R++ + +AER RR+++++R+ +L+ +VP +K+ + +L + I+Y++ L
Sbjct: 170 VHPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKM-DRTSILGDTIDYVKELT 228
Query: 205 RQVEFLSMKLEAVNSRMNLTPTIE 228
+++ L ++ ++L T++
Sbjct: 229 ERIKTLEEEIGVTPEELDLLNTMK 252
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 26 PFPINNGGAGDAGLRMGNM-GHGFGESSALRDGSMEESTVTE 66
P+P GG G G+ M ++ +G SA G M+ S E
Sbjct: 27 PYPGGGGGGGGGGMMMSDLLFYGGDGGSAEARGGMDASPFQE 68
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 96 (38.9 bits), Expect = 0.00018, P = 0.00018
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI---GKALVLDEIINYIQSLQR 205
A+ Q D+H+L ER RR I++R+K L L+P N K +L ++YI+ LQR
Sbjct: 16 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 75
Query: 206 Q------VEFLSMKLEAVNSRMNL 223
+ +E KLE N + L
Sbjct: 76 EQQRAKDLENRQKKLEHANRHLLL 99
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 96 (38.9 bits), Expect = 0.00018, P = 0.00018
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVI---GKALVLDEIINYIQSLQR 205
A+ Q D+H+L ER RR I++R+K L L+P N K +L ++YI+ LQR
Sbjct: 16 AKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQR 75
Query: 206 Q------VEFLSMKLEAVNSRMNL 223
+ +E KLE N + L
Sbjct: 76 EQQRAKDLENRQKKLEHANRHLLL 99
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 112 (44.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 148 RARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV 207
+ +R ++ S A ++RRE+ISER++ LQ+LVP KV +LD I+Y++ +Q Q+
Sbjct: 190 KKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKV-DMVTMLDRAISYVKFMQMQL 248
Query: 208 EFL 210
L
Sbjct: 249 RVL 251
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 30 NNGGAGDAGLRM 41
++GG+GD+G+ M
Sbjct: 144 SSGGSGDSGMVM 155
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 110 (43.8 bits), Expect = 0.00024, P = 0.00024
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 156 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
D ++ R RRE+ISE+++IL+ +VPG K+ A +LDE I Y + L+RQV L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKM-DTASMLDEAIRYTKFLKRQVRIL 174
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 103 (41.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 146 HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
H A A H +AER RREKI++R L ++P K+ KA +L + +YI+ LQ
Sbjct: 119 HGGAAAAYAQLEHVVAERKRREKINQRFMELSAVIPKLKKM-DKATILSDAASYIRELQE 177
Query: 206 QVEFLSMKLEA-VNSRMNLTPT 226
+++ L + A V TP+
Sbjct: 178 KLKALEEQAAARVTEAAMATPS 199
Score = 48 (22.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/61 (32%), Positives = 26/61 (42%)
Query: 30 NNGGAGDAGLRMGNMGHGFGESSALRDGSMEESTVTEQSGGGCGRKRRDLSSEDESSKIV 89
+ GGA GL + HG G S + G+ S GGCG L S D S+ V
Sbjct: 59 HGGGASRIGLAVAVDEHG-GWSRSPNPGARPPS-------GGCGSNNLPLMSWDFSAASV 110
Query: 90 S 90
+
Sbjct: 111 A 111
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMK 213
+TD S+A R RR +IS+R KILQ +VPG K+ +LDE I+Y++ L+ Q+ +
Sbjct: 44 STDPQSVAARDRRHRISDRFKILQSMVPGGAKM-DTVSMLDEAISYVKFLKAQIWYHQNM 102
Query: 214 LEAVN-----SRMNLTPTIEGFHPKDLG 236
L +N S +P F PK G
Sbjct: 103 LLFINDHETTSSCTYSPGAGEFGPKLFG 130
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 116 (45.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/73 (34%), Positives = 48/73 (65%)
Query: 160 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNS 219
+AER RR+K+++R+ +L+ +VP +K+ +A +L + I+Y++ L +++ L +LE+
Sbjct: 310 MAERRRRKKLNDRLYMLRSVVPKISKM-DRASILGDAIDYLKELLQRINDLHNELESTPP 368
Query: 220 RMNLTPTIEGFHP 232
+L PT FHP
Sbjct: 369 G-SLPPTSSSFHP 380
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 97 DLNDSNGKWMKTSGSK---NENGS 117
D N+ G W+ G + NE GS
Sbjct: 4 DGNNGGGVWLNGGGGEREENEEGS 27
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 151 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 210
+G + +H ++ER RREK+ E IL+ +VP +KV KA +L E I Y++ L+++VE L
Sbjct: 238 QGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKV-DKASILAETIAYLKELEKRVEEL 296
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 40/148 (27%), Positives = 70/148 (47%)
Query: 85 SSKIVSTTSSANDLNDSNGKWMKTSGSKNENGS--KAEVEASSAAGNXXXXXXXXXXXXX 142
S I+ + N + G KT+ N+ GS K V S +GN
Sbjct: 172 SESIIQNRNFINRVKSIFGSG-KTTKHTNQTGSYPKPAVSDHSKSGNQQFGSERKRRRKL 230
Query: 143 DYIHVRA----RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
+ V A + A SH AE+ RREK++ R L+ +VP +++ KA +L + ++
Sbjct: 231 ETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRM-DKASLLSDAVS 289
Query: 199 YIQSLQRQVEFLSMKLEAVNSRMNLTPT 226
YI+SL+ +++ L +++ +M +T T
Sbjct: 290 YIESLKSKIDDLETEIK----KMKMTET 313
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 109 (43.4 bits), Expect = 0.00040, P = 0.00040
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 148 RARRGQA---TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 204
R RR A ++ S+A R RRE++S+RM+ LQ LVPG + + A +L+E I Y++ L+
Sbjct: 112 RPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGAR-LDTASMLEEAIRYVKFLK 170
Query: 205 RQVEFLSMKLEAVN 218
V+ L A++
Sbjct: 171 GHVQSLERAAAALH 184
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 112 (44.5 bits), Expect = 0.00042, P = 0.00042
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEA 216
H LAER RREK+SE+ L L+PG K K +LD+ I+ ++ LQ Q+ L + EA
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKA-DKVTILDDAISRMKQLQEQLRTLKEEKEA 177
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 56/229 (24%), Positives = 98/229 (42%)
Query: 28 PINNGGAGDAGLRMGNMGHGFGESSALRDGSMEE---STVTEQSGGGCGRKRRDLSSEDE 84
P N G A + GN + +S + + +E+ S+V Q+ +DL+ +
Sbjct: 271 PTNTGIESPARVNNGNNSNSNSKSDSHQISKLEKNDISSVENQNRQSSCLVEKDLTFQGG 330
Query: 85 SSKIVSTTSSANDLNDSNGKWMKTS-GSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXD 143
K T S N+S+ K S GS N+ G + +A N +
Sbjct: 331 LLKSNETLSFCG--NESSKKRTSVSKGSNNDEGMLSFSTVVRSAANDSDHSDLEASVVKE 388
Query: 144 YIHVRA------RRGQATDS-------HSLAERARREKISERMKILQDLVPGCNKVIGKA 190
I V +RG+ + H AER RREK+++R L+ +VP +K+ KA
Sbjct: 389 AIVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKM-DKA 447
Query: 191 LVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNLTPTIEGFHPKDLGEQA 239
+L + I+YI L+ +++ E + +++ + EG + K G +A
Sbjct: 448 SLLGDAISYINELKSKLQQAESDKEEIQKKLD-GMSKEGNNGKGCGSRA 495
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 149 ARRGQAT--DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
A +G +T HS E+ RR KI++R++IL++L+P ++ KA L E+I YI+ LQ +
Sbjct: 139 ADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEK 198
Query: 207 VE 208
V+
Sbjct: 199 VQ 200
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 148 RARRGQATDSHSL-AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 206
+ + G+ + + +L AER RR+K+++R+ L+ LVP K + +A +L + INY++ LQ +
Sbjct: 304 KKKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITK-LDRASILGDAINYVKELQNE 362
Query: 207 VEFLSMKLEAVNSR-----------MNLTPTI-EGFHP 232
+ L +LE NS M+L T+ GFHP
Sbjct: 363 AKELQDELEE-NSETEDGSNRPQGGMSLNGTVVTGFHP 399
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 105 (42.0 bits), Expect = 0.00075, P = 0.00075
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPG-CNKVIGKALVLDEIINYIQSLQRQV 207
A+R ++ + + E+ RR++I +++ ILQ L+P C K A L+ II YI+SL+ QV
Sbjct: 63 AKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTKP-DLASKLENIIEYIKSLKYQV 121
Query: 208 EFLSM 212
+ +SM
Sbjct: 122 DVMSM 126
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 110 (43.8 bits), Expect = 0.00076, P = 0.00076
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 151 RGQAT-DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQV-E 208
R Q+ H LAER RREK+++R L L+PG K+ KA VL + I +I+ LQ V E
Sbjct: 119 RSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKM-DKASVLGDAIKHIKYLQESVKE 177
Query: 209 FLSMKLE 215
+ K E
Sbjct: 178 YEEQKKE 184
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 107 (42.7 bits), Expect = 0.00078, P = 0.00078
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 148 RARRGQ--ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQR 205
R R G +TD S+A R RR +IS+R ++L+ LVPG +K+ +L++ I+Y++ L+
Sbjct: 45 RRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKM-DTVSMLEQAIHYVKFLKT 103
Query: 206 QV 207
Q+
Sbjct: 104 QI 105
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 110 (43.8 bits), Expect = 0.00079, P = 0.00079
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 158 HSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
HS+ E+ RR KI+ER +IL++L+P + A L E+I+Y+Q LQ +V+
Sbjct: 50 HSVTEQRRRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>TAIR|locus:2098008 [details] [associations]
symbol:PIL2 "phytochrome interacting factor 3-like 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010017 "red or far-red light signaling
pathway" evidence=IEP] [GO:0010089 "xylem development"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 GO:GO:0010017
EMBL:AL138651 EMBL:AB090874 EMBL:BT033108 IPI:IPI00525935
IPI:IPI00846835 PIR:T48001 RefSeq:NP_001078329.1 RefSeq:NP_191768.2
UniGene:At.1005 UniGene:At.50304 ProteinModelPortal:Q8L5W7
SMR:Q8L5W7 IntAct:Q8L5W7 STRING:Q8L5W7 EnsemblPlants:AT3G62090.2
GeneID:825382 KEGG:ath:AT3G62090 TAIR:At3g62090 eggNOG:NOG305930
HOGENOM:HOG000115543 InParanoid:Q8L5W7 OMA:ETNMLES PhylomeDB:Q8L5W7
ProtClustDB:CLSN2680935 Genevestigator:Q8L5W7 Uniprot:Q8L5W7
Length = 363
Score = 108 (43.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 22/63 (34%), Positives = 44/63 (69%)
Query: 150 RRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEF 209
+R + ++++ ER +R I+++M+ LQ+L+P +K +++ LDE INY+ +LQ QV+
Sbjct: 185 KRKRNAEAYNSPERNQRNDINKKMRTLQNLLPNSHKDDNESM-LDEAINYMTNLQLQVQM 243
Query: 210 LSM 212
++M
Sbjct: 244 MTM 246
Score = 40 (19.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 83 DESSKIVSTTSSANDLNDSNGKWMKTSGSKNENG-SKAEVEA 123
D S K+ TSS DS G +S +E+ ++ +V A
Sbjct: 136 DRSFKLGFDTSSVGFTEDSEGSMYLSSSLDDESDDARPQVPA 177
>UNIPROTKB|Q2QMM8 [details] [associations]
symbol:LOC_Os12g40630 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 Gramene:Q2QMM8
eggNOG:NOG272270 Uniprot:Q2QMM8
Length = 249
Score = 108 (43.1 bits), Expect = 0.00084, P = 0.00084
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 155 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSM 212
TD RR KI+E +K LQ LVP C+K +A LD+ I Y++SLQ+ + +S+
Sbjct: 98 TDEGICVMEKRRCKINENLKTLQQLVPVCDKSNNQASTLDKTIRYMKSLQQHAQAMSV 155
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 109 (43.4 bits), Expect = 0.00092, P = 0.00092
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 163 RARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
R R EK+S +M+ LQ LVP C+K K VLD+ I Y+++LQ Q++ +S
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHKT-DKVSVLDKTIEYMKNLQLQLQMMS 191
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 110 (43.8 bits), Expect = 0.00096, Sum P(2) = 0.00095
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 149 ARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE 208
A G D H +AER RREKI++R L ++PG K+ KA +L + + Y++ LQ +V+
Sbjct: 160 AAPGYVQD-HIIAERRRREKINQRFIELSTVIPGLKKM-DKATILGDAVKYVKELQEKVK 217
Query: 209 FL 210
L
Sbjct: 218 TL 219
Score = 36 (17.7 bits), Expect = 0.00096, Sum P(2) = 0.00095
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 42 GNMGHGFGESSALRDGSMEESTVTEQSGGGCG 73
G G G S + + T TE SGGG G
Sbjct: 96 GGGGRGHRPMSWNFSAASAQPT-TEDSGGGGG 126
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 105 (42.0 bits), Expect = 0.00098, P = 0.00098
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 154 ATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 211
A S S + RR++I+ER++ILQ+L+P KV + +L+E I Y++ L Q++ LS
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTKV-DISTMLEEAIQYVKFLHLQIKLLS 171
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 276 251 0.00081 114 3 11 23 0.39 34
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 600 (64 KB)
Total size of DFA: 176 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.08u 0.10s 25.18t Elapsed: 00:00:01
Total cpu time: 25.09u 0.10s 25.19t Elapsed: 00:00:01
Start: Sat May 11 00:00:30 2013 End: Sat May 11 00:00:31 2013
WARNINGS ISSUED: 1