Query 023849
Match_columns 276
No_of_seqs 276 out of 1883
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 07:05:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023849.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023849hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02332 HpaX 4-hydroxyphenyl 99.9 8.4E-25 1.8E-29 191.6 18.8 183 46-245 5-194 (412)
2 COG2814 AraJ Arabinose efflux 99.9 1.8E-24 3.9E-29 183.1 19.2 154 88-241 35-189 (394)
3 KOG1330 Sugar transporter/spin 99.9 4.8E-26 1E-30 192.5 9.1 188 42-246 26-215 (493)
4 PRK14995 methyl viologen resis 99.9 3.8E-24 8.2E-29 191.6 19.2 181 47-244 4-186 (495)
5 COG2271 UhpC Sugar phosphate p 99.9 1.3E-24 2.8E-29 182.3 9.6 183 47-246 27-212 (448)
6 TIGR01299 synapt_SV2 synaptic 99.9 3.9E-24 8.5E-29 196.7 13.3 185 45-247 163-361 (742)
7 PRK03545 putative arabinose tr 99.9 8.9E-23 1.9E-27 177.6 19.7 156 88-243 31-187 (390)
8 PRK10213 nepI ribonucleoside t 99.9 2.8E-22 6.1E-27 174.6 21.1 155 89-243 43-198 (394)
9 TIGR00903 2A0129 major facilit 99.9 5.5E-23 1.2E-27 177.2 16.2 159 87-246 12-171 (368)
10 PRK11663 regulatory protein Uh 99.9 6.1E-23 1.3E-27 181.0 16.8 180 48-244 22-202 (434)
11 PRK15403 multidrug efflux syst 99.9 2.1E-22 4.5E-27 176.5 18.8 158 87-244 37-195 (413)
12 PRK11551 putative 3-hydroxyphe 99.9 1.9E-22 4.1E-27 176.3 17.9 183 46-245 12-195 (406)
13 TIGR00891 2A0112 putative sial 99.9 2.7E-22 5.9E-27 174.7 17.7 182 45-244 8-192 (405)
14 TIGR00711 efflux_EmrB drug res 99.9 2.6E-22 5.6E-27 179.3 16.3 177 50-243 3-180 (485)
15 PRK10091 MFS transport protein 99.9 9.3E-22 2E-26 170.7 18.8 157 88-244 25-182 (382)
16 TIGR00893 2A0114 d-galactonate 99.9 3.8E-22 8.3E-27 172.7 15.7 157 88-244 16-173 (399)
17 TIGR00894 2A0114euk Na(+)-depe 99.9 8.1E-22 1.8E-26 175.4 18.1 202 44-245 14-224 (465)
18 TIGR00710 efflux_Bcr_CflA drug 99.9 1.1E-21 2.3E-26 170.0 18.4 157 88-244 27-184 (385)
19 PRK10077 xylE D-xylose transpo 99.9 5.7E-22 1.2E-26 176.9 16.3 181 47-245 10-219 (479)
20 PRK09556 uhpT sugar phosphate 99.9 7.3E-23 1.6E-27 182.2 9.8 180 47-243 27-215 (467)
21 PF07690 MFS_1: Major Facilita 99.9 1.1E-21 2.4E-26 167.7 16.7 153 90-242 20-174 (352)
22 PRK10406 alpha-ketoglutarate t 99.9 1.7E-21 3.7E-26 171.8 17.5 169 47-232 20-211 (432)
23 PRK12307 putative sialic acid 99.9 1.8E-21 3.8E-26 171.2 17.1 165 46-227 15-180 (426)
24 TIGR00890 2A0111 Oxalate/Forma 99.9 1.5E-21 3.2E-26 168.2 15.1 154 88-242 25-179 (377)
25 PRK03699 putative transporter; 99.9 5.6E-21 1.2E-25 166.5 18.7 174 47-237 5-180 (394)
26 TIGR00879 SP MFS transporter, 99.9 1.3E-21 2.9E-26 173.6 15.0 155 89-244 51-220 (481)
27 PRK10642 proline/glycine betai 99.9 3E-21 6.5E-26 172.8 16.8 180 48-245 15-217 (490)
28 PRK09705 cynX putative cyanate 99.9 6.7E-21 1.5E-25 166.0 18.3 145 87-232 30-176 (393)
29 TIGR00887 2A0109 phosphate:H+ 99.9 2.8E-21 6E-26 173.5 16.3 185 45-247 12-231 (502)
30 PRK15402 multidrug efflux syst 99.9 4.8E-21 1.1E-25 167.5 17.1 157 88-244 35-192 (406)
31 TIGR00881 2A0104 phosphoglycer 99.9 6.3E-22 1.4E-26 170.7 11.3 157 88-244 17-175 (379)
32 TIGR00895 2A0115 benzoate tran 99.9 2.3E-21 5.1E-26 168.3 15.0 181 47-244 15-196 (398)
33 PLN00028 nitrate transmembrane 99.9 2E-20 4.3E-25 166.8 20.7 154 88-242 58-221 (476)
34 PRK03893 putative sialic acid 99.9 8.7E-21 1.9E-25 170.1 18.4 166 46-228 17-183 (496)
35 TIGR00898 2A0119 cation transp 99.9 2.7E-21 5.8E-26 173.8 14.6 157 87-246 110-269 (505)
36 PRK11652 emrD multidrug resist 99.9 2E-20 4.2E-25 163.1 19.4 157 88-244 30-187 (394)
37 KOG2533 Permease of the major 99.9 2.1E-21 4.6E-26 171.0 13.3 186 44-245 40-232 (495)
38 PRK10504 putative transporter; 99.9 1.8E-20 3.8E-25 167.1 19.0 177 50-243 11-188 (471)
39 PRK11102 bicyclomycin/multidru 99.9 1.4E-20 3E-25 162.9 16.1 159 85-243 10-169 (377)
40 PRK10473 multidrug efflux syst 99.9 4.9E-20 1.1E-24 160.5 19.0 157 88-244 25-182 (392)
41 TIGR00900 2A0121 H+ Antiporter 99.9 1.8E-20 3.9E-25 160.9 15.5 150 90-239 23-178 (365)
42 TIGR00886 2A0108 nitrite extru 99.9 3.9E-20 8.4E-25 159.4 17.3 156 88-244 23-192 (366)
43 PRK11273 glpT sn-glycerol-3-ph 99.9 1.9E-20 4E-25 166.1 15.6 180 48-245 28-213 (452)
44 TIGR00892 2A0113 monocarboxyla 99.9 5.8E-20 1.3E-24 163.0 18.6 152 89-241 42-195 (455)
45 TIGR00806 rfc RFC reduced fola 99.8 9.9E-20 2.2E-24 157.1 19.2 134 90-224 50-184 (511)
46 PRK09952 shikimate transporter 99.8 3.7E-20 8E-25 163.5 16.6 168 46-230 19-210 (438)
47 PRK11043 putative transporter; 99.8 1.2E-19 2.6E-24 158.5 19.0 154 88-241 28-182 (401)
48 PRK15034 nitrate/nitrite trans 99.8 1.6E-19 3.5E-24 157.8 19.5 177 48-242 33-234 (462)
49 KOG2532 Permease of the major 99.8 1.6E-19 3.5E-24 158.6 18.7 153 93-245 65-221 (466)
50 KOG0254 Predicted transporter 99.8 3.4E-20 7.3E-25 166.8 14.8 150 101-251 89-240 (513)
51 PRK05122 major facilitator sup 99.8 8.9E-20 1.9E-24 159.1 16.8 140 91-230 41-189 (399)
52 PRK10054 putative transporter; 99.8 2.3E-19 5E-24 156.4 19.2 153 90-242 32-184 (395)
53 PRK15075 citrate-proton sympor 99.8 8E-20 1.7E-24 161.3 16.2 164 47-227 13-199 (434)
54 TIGR00712 glpT glycerol-3-phos 99.8 1.5E-19 3.2E-24 159.7 17.2 179 48-244 26-210 (438)
55 PRK12382 putative transporter; 99.8 3.5E-19 7.6E-24 155.1 19.1 138 91-228 41-187 (392)
56 PRK10133 L-fucose transporter; 99.8 4.4E-19 9.5E-24 156.5 19.6 126 88-213 48-176 (438)
57 PRK11646 multidrug resistance 99.8 3.8E-19 8.3E-24 155.3 19.0 153 90-242 35-187 (400)
58 TIGR00805 oat sodium-independe 99.8 3.8E-20 8.3E-25 169.4 12.9 152 88-239 55-280 (633)
59 PRK09874 drug efflux system pr 99.8 1.2E-18 2.6E-23 152.3 19.7 155 88-243 36-196 (408)
60 KOG0255 Synaptic vesicle trans 99.8 1.3E-19 2.8E-24 163.5 13.2 157 94-253 111-267 (521)
61 TIGR00885 fucP L-fucose:H+ sym 99.8 9.5E-19 2E-23 153.1 18.3 150 88-237 25-204 (410)
62 TIGR00899 2A0120 sugar efflux 99.8 1.2E-18 2.6E-23 150.5 16.6 155 91-245 23-181 (375)
63 PRK10207 dipeptide/tripeptide 99.8 9.5E-19 2.1E-23 156.1 16.2 149 90-239 39-192 (489)
64 PRK03633 putative MFS family t 99.8 2.4E-18 5.2E-23 149.3 18.0 127 88-214 28-154 (381)
65 PRK11195 lysophospholipid tran 99.8 1.5E-18 3.3E-23 151.2 16.7 151 90-244 27-177 (393)
66 PF06609 TRI12: Fungal trichot 99.8 1.2E-18 2.7E-23 155.5 15.8 153 88-242 66-220 (599)
67 PTZ00207 hypothetical protein; 99.8 4.5E-18 9.8E-23 152.7 18.5 149 90-241 51-206 (591)
68 cd06174 MFS The Major Facilita 99.8 3.7E-18 8.1E-23 145.5 15.4 150 89-238 22-172 (352)
69 TIGR00924 yjdL_sub1_fam amino 99.8 7.5E-18 1.6E-22 150.1 17.1 143 91-233 36-185 (475)
70 TIGR00896 CynX cyanate transpo 99.8 9.6E-18 2.1E-22 144.1 16.6 142 87-230 21-165 (355)
71 COG2223 NarK Nitrate/nitrite t 99.8 3.2E-18 7E-23 144.1 13.0 177 49-244 14-197 (417)
72 TIGR00897 2A0118 polyol permea 99.8 1.7E-17 3.6E-22 145.1 18.1 152 90-241 37-194 (402)
73 KOG3764 Vesicular amine transp 99.8 2.5E-18 5.5E-23 143.3 11.4 149 94-242 99-249 (464)
74 KOG2504 Monocarboxylate transp 99.8 2.2E-17 4.8E-22 146.8 15.2 154 90-244 70-225 (509)
75 PRK10489 enterobactin exporter 99.8 2.3E-17 5E-22 144.9 15.0 153 90-243 41-199 (417)
76 KOG0569 Permease of the major 99.7 1.4E-17 2.9E-22 145.4 12.7 145 104-249 63-213 (485)
77 KOG2615 Permease of the major 99.7 1E-17 2.2E-22 138.9 11.0 118 97-215 64-181 (451)
78 PRK15011 sugar efflux transpor 99.7 2E-16 4.3E-21 137.9 19.0 154 90-244 40-198 (393)
79 TIGR00880 2_A_01_02 Multidrug 99.7 3.6E-17 7.8E-22 121.0 12.3 136 107-242 4-140 (141)
80 PRK09584 tppB putative tripept 99.7 1.9E-16 4.1E-21 141.9 18.6 144 90-233 46-194 (500)
81 TIGR00901 2A0125 AmpG-related 99.7 2.2E-16 4.7E-21 135.8 15.0 155 87-243 9-181 (356)
82 PF00083 Sugar_tr: Sugar (and 99.7 7.4E-20 1.6E-24 162.2 -6.9 154 100-254 45-205 (451)
83 PRK15462 dipeptide/tripeptide 99.7 4E-16 8.7E-21 137.9 16.2 141 91-231 35-180 (493)
84 TIGR00889 2A0110 nucleoside tr 99.7 1E-15 2.2E-20 134.5 18.1 145 100-244 250-406 (418)
85 TIGR00883 2A0106 metabolite-pr 99.7 1.6E-16 3.4E-21 137.8 12.7 135 98-232 27-183 (394)
86 PRK10642 proline/glycine betai 99.7 2.2E-15 4.8E-20 135.0 18.3 157 91-248 276-437 (490)
87 PRK08633 2-acyl-glycerophospho 99.7 9.1E-16 2E-20 150.5 16.6 154 91-244 35-203 (1146)
88 TIGR00902 2A0127 phenyl propri 99.7 1.1E-15 2.4E-20 132.7 15.1 137 88-228 26-167 (382)
89 PRK06814 acylglycerophosphoeth 99.7 1.4E-15 3.1E-20 149.1 17.3 150 92-242 42-196 (1140)
90 PRK11010 ampG muropeptide tran 99.7 2.2E-15 4.9E-20 134.8 16.6 152 89-243 35-197 (491)
91 PRK15011 sugar efflux transpor 99.7 8.9E-15 1.9E-19 127.6 19.9 148 91-239 242-390 (393)
92 TIGR00882 2A0105 oligosacchari 99.7 1.8E-15 4E-20 131.9 15.2 151 91-243 28-186 (396)
93 COG0738 FucP Fucose permease [ 99.7 6.6E-15 1.4E-19 123.6 17.6 153 88-240 35-210 (422)
94 KOG0253 Synaptic vesicle trans 99.7 3.1E-16 6.6E-21 129.7 9.4 155 90-247 102-257 (528)
95 TIGR01299 synapt_SV2 synaptic 99.7 4.5E-15 9.8E-20 137.2 17.0 141 103-244 597-737 (742)
96 PRK05122 major facilitator sup 99.7 9.5E-15 2.1E-19 127.5 18.1 147 94-242 244-391 (399)
97 PRK11902 ampG muropeptide tran 99.7 6E-15 1.3E-19 129.0 16.8 153 88-243 21-184 (402)
98 PRK09528 lacY galactoside perm 99.7 1.4E-15 2.9E-20 133.8 12.6 146 96-241 257-404 (420)
99 KOG0252 Inorganic phosphate tr 99.6 2.4E-16 5.3E-21 133.7 7.2 186 44-247 36-252 (538)
100 PRK11128 putative 3-phenylprop 99.6 2.2E-15 4.8E-20 130.8 13.1 141 88-232 26-171 (382)
101 TIGR00890 2A0111 Oxalate/Forma 99.6 2.7E-15 5.9E-20 129.2 12.7 142 91-232 230-374 (377)
102 TIGR00899 2A0120 sugar efflux 99.6 3.2E-14 7E-19 122.8 19.3 147 91-238 225-372 (375)
103 cd06174 MFS The Major Facilita 99.6 1.6E-14 3.4E-19 123.1 15.8 145 93-237 203-349 (352)
104 PRK10489 enterobactin exporter 99.6 5.6E-14 1.2E-18 123.4 19.5 152 91-242 249-401 (417)
105 PRK11551 putative 3-hydroxyphe 99.6 1.7E-14 3.8E-19 126.1 15.5 149 90-238 244-394 (406)
106 PRK09528 lacY galactoside perm 99.6 2.1E-14 4.6E-19 126.2 16.1 151 91-243 36-194 (420)
107 KOG2325 Predicted transporter/ 99.6 3.7E-14 7.9E-19 123.4 16.6 188 44-248 29-237 (488)
108 PRK12382 putative transporter; 99.6 4.9E-14 1.1E-18 122.7 17.5 144 94-239 244-388 (392)
109 TIGR00892 2A0113 monocarboxyla 99.6 7.8E-15 1.7E-19 130.3 12.2 146 90-235 265-416 (455)
110 PRK09556 uhpT sugar phosphate 99.6 3.2E-14 7E-19 126.8 16.2 149 91-239 284-448 (467)
111 TIGR00902 2A0127 phenyl propri 99.6 6.2E-14 1.3E-18 121.8 17.1 143 91-235 230-374 (382)
112 PRK03893 putative sialic acid 99.6 4.4E-14 9.5E-19 126.8 16.2 141 91-231 301-444 (496)
113 PRK03699 putative transporter; 99.6 9E-14 2E-18 121.3 17.5 148 91-239 231-379 (394)
114 TIGR00879 SP MFS transporter, 99.6 4.9E-14 1.1E-18 125.1 15.9 154 90-243 308-473 (481)
115 TIGR00893 2A0114 d-galactonate 99.6 3E-14 6.4E-19 123.3 14.0 146 91-237 241-396 (399)
116 PRK09874 drug efflux system pr 99.6 2.2E-14 4.9E-19 125.4 12.9 138 103-240 260-398 (408)
117 PRK03545 putative arabinose tr 99.6 3.7E-13 8.1E-18 117.2 18.8 149 90-240 230-380 (390)
118 PF05977 MFS_3: Transmembrane 99.6 1.3E-13 2.8E-18 123.5 15.9 152 90-241 34-191 (524)
119 PRK03633 putative MFS family t 99.6 3.4E-13 7.3E-18 117.1 18.2 143 90-235 224-367 (381)
120 PRK09705 cynX putative cyanate 99.6 7.4E-13 1.6E-17 115.5 19.6 153 91-245 230-386 (393)
121 PRK10077 xylE D-xylose transpo 99.5 7.2E-14 1.6E-18 124.8 13.5 155 90-244 295-461 (479)
122 TIGR00891 2A0112 putative sial 99.5 8.1E-14 1.8E-18 121.4 13.5 135 90-224 263-400 (405)
123 TIGR01301 GPH_sucrose GPH fami 99.5 3.6E-13 7.7E-18 118.9 17.0 155 90-244 28-222 (477)
124 PF05977 MFS_3: Transmembrane 99.5 8.4E-13 1.8E-17 118.2 18.8 150 90-239 242-393 (524)
125 TIGR00883 2A0106 metabolite-pr 99.5 6E-14 1.3E-18 121.5 10.6 139 91-229 245-390 (394)
126 COG2271 UhpC Sugar phosphate p 99.5 4.3E-14 9.4E-19 119.4 8.6 177 47-239 250-433 (448)
127 PRK11663 regulatory protein Uh 99.5 4.8E-13 1.1E-17 118.2 14.5 149 91-240 269-424 (434)
128 TIGR00792 gph sugar (Glycoside 99.5 2.8E-13 6.2E-18 119.5 12.7 155 90-244 24-198 (437)
129 TIGR00895 2A0115 benzoate tran 99.5 7.2E-13 1.6E-17 115.0 14.9 124 90-213 274-397 (398)
130 PLN00028 nitrate transmembrane 99.5 4.2E-13 9.1E-18 119.9 13.3 147 91-239 278-432 (476)
131 PF11700 ATG22: Vacuole efflux 99.5 1.9E-12 4.2E-17 114.7 17.1 149 91-239 307-467 (477)
132 TIGR00897 2A0118 polyol permea 99.5 2.6E-12 5.7E-17 112.3 17.9 148 90-239 246-400 (402)
133 COG2807 CynX Cyanate permease 99.5 1.7E-12 3.7E-17 107.8 15.0 149 87-237 33-183 (395)
134 PRK09952 shikimate transporter 99.5 3.5E-12 7.6E-17 112.8 18.1 149 91-239 276-432 (438)
135 PRK11128 putative 3-phenylprop 99.5 3.5E-12 7.6E-17 110.8 17.3 139 92-232 231-371 (382)
136 PRK11273 glpT sn-glycerol-3-ph 99.5 2E-12 4.3E-17 114.9 16.0 149 91-239 279-434 (452)
137 PRK11010 ampG muropeptide tran 99.4 9.2E-12 2E-16 111.6 18.7 151 90-240 247-403 (491)
138 TIGR00887 2A0109 phosphate:H+ 99.4 5.1E-12 1.1E-16 113.7 16.7 155 90-245 312-493 (502)
139 PRK15075 citrate-proton sympor 99.4 4.6E-12 1E-16 112.0 15.9 129 91-219 264-398 (434)
140 COG3104 PTR2 Dipeptide/tripept 99.4 9.6E-13 2.1E-17 113.7 11.1 144 96-239 56-205 (498)
141 TIGR00712 glpT glycerol-3-phos 99.4 9.1E-13 2E-17 116.5 11.5 154 91-244 277-437 (438)
142 TIGR00889 2A0110 nucleoside tr 99.4 5.9E-12 1.3E-16 110.7 16.1 147 90-244 27-183 (418)
143 COG2814 AraJ Arabinose efflux 99.4 1E-11 2.2E-16 105.9 16.6 150 89-240 235-386 (394)
144 PRK10504 putative transporter; 99.4 1.3E-11 2.9E-16 110.1 18.1 125 90-214 285-413 (471)
145 TIGR00898 2A0119 cation transp 99.4 1.7E-11 3.6E-16 110.4 18.3 137 105-243 359-497 (505)
146 PRK12307 putative sialic acid 99.4 1.2E-11 2.5E-16 108.9 16.9 136 90-225 255-393 (426)
147 TIGR00900 2A0121 H+ Antiporter 99.4 8E-12 1.7E-16 107.2 14.7 125 90-214 235-361 (365)
148 PRK08633 2-acyl-glycerophospho 99.4 6.6E-12 1.4E-16 123.5 16.0 146 90-235 257-405 (1146)
149 TIGR00792 gph sugar (Glycoside 99.4 2.2E-11 4.9E-16 107.5 17.8 123 95-218 252-383 (437)
150 TIGR00882 2A0105 oligosacchari 99.4 5.7E-12 1.2E-16 110.0 13.8 141 97-237 250-392 (396)
151 TIGR02718 sider_RhtX_FptX side 99.4 2.6E-11 5.7E-16 105.6 17.8 155 88-242 23-186 (390)
152 TIGR00881 2A0104 phosphoglycer 99.4 1.3E-12 2.9E-17 112.5 9.2 132 91-222 242-379 (379)
153 PRK10406 alpha-ketoglutarate t 99.4 3.1E-11 6.7E-16 106.6 17.2 148 91-238 269-422 (432)
154 PRK15402 multidrug efflux syst 99.4 5.7E-11 1.2E-15 104.0 18.0 144 91-235 241-390 (406)
155 PF05631 DUF791: Protein of un 99.4 6.7E-11 1.5E-15 98.9 17.2 153 91-244 59-220 (354)
156 TIGR00788 fbt folate/biopterin 99.4 1.7E-11 3.6E-16 109.3 14.3 151 90-243 50-211 (468)
157 TIGR01272 gluP glucose/galacto 99.4 5.3E-11 1.2E-15 100.4 16.7 128 95-225 172-300 (310)
158 KOG0569 Permease of the major 99.4 5E-11 1.1E-15 104.6 16.8 156 91-247 295-461 (485)
159 TIGR02718 sider_RhtX_FptX side 99.4 7.4E-11 1.6E-15 102.8 17.8 144 91-234 233-385 (390)
160 PRK10054 putative transporter; 99.3 2.3E-11 5E-16 106.2 14.5 143 94-237 237-381 (395)
161 COG2270 Permeases of the major 99.3 1.5E-11 3.3E-16 104.3 11.8 145 91-235 278-424 (438)
162 PF01306 LacY_symp: LacY proto 99.3 8.7E-11 1.9E-15 101.2 16.4 146 98-243 256-403 (412)
163 PRK06814 acylglycerophosphoeth 99.3 2.2E-11 4.8E-16 119.8 14.4 146 91-236 251-418 (1140)
164 PRK10091 MFS transport protein 99.3 1.5E-10 3.2E-15 100.6 17.9 150 90-241 224-377 (382)
165 KOG4686 Predicted sugar transp 99.3 1.2E-10 2.7E-15 93.7 15.7 175 44-239 262-441 (459)
166 PRK10213 nepI ribonucleoside t 99.3 2E-10 4.4E-15 100.2 18.3 142 90-232 241-383 (394)
167 PF03825 Nuc_H_symport: Nucleo 99.3 1.3E-10 2.9E-15 101.1 16.3 151 91-241 232-396 (400)
168 KOG2504 Monocarboxylate transp 99.3 3.5E-11 7.6E-16 107.5 12.9 151 90-240 322-476 (509)
169 PRK11902 ampG muropeptide tran 99.3 2.4E-10 5.2E-15 100.0 17.8 144 90-237 234-387 (402)
170 PRK11195 lysophospholipid tran 99.3 3.1E-10 6.8E-15 99.0 18.4 148 91-239 231-379 (393)
171 PF06813 Nodulin-like: Nodulin 99.3 1.5E-10 3.3E-15 93.5 14.9 150 90-241 26-183 (250)
172 TIGR00896 CynX cyanate transpo 99.3 1.3E-10 2.8E-15 99.9 14.9 124 90-214 221-346 (355)
173 PRK11646 multidrug resistance 99.3 1.8E-10 3.8E-15 100.8 16.0 144 90-233 232-381 (400)
174 PRK09848 glucuronide transport 99.3 3.2E-10 7E-15 100.6 16.7 124 91-214 254-386 (448)
175 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.1E-10 2.3E-15 102.6 13.4 139 90-228 266-409 (412)
176 PRK10473 multidrug efflux syst 99.3 2.5E-10 5.4E-15 99.5 15.6 134 91-229 229-363 (392)
177 TIGR00711 efflux_EmrB drug res 99.3 2.7E-10 5.8E-15 102.0 16.1 124 91-214 281-408 (485)
178 KOG2563 Permease of the major 99.2 2.7E-10 5.8E-15 97.4 14.8 183 43-243 39-238 (480)
179 COG2223 NarK Nitrate/nitrite t 99.2 1.1E-10 2.4E-15 98.9 12.4 148 91-239 244-400 (417)
180 TIGR00710 efflux_Bcr_CflA drug 99.2 1.2E-09 2.5E-14 94.7 18.9 132 91-224 232-370 (385)
181 TIGR00894 2A0114euk Na(+)-depe 99.2 1.9E-10 4.1E-15 102.6 13.6 148 91-239 287-449 (465)
182 PF03137 OATP: Organic Anion T 99.2 1.1E-12 2.3E-17 117.9 -0.8 152 88-239 25-249 (539)
183 PRK14995 methyl viologen resis 99.2 1.8E-10 4E-15 103.5 13.5 124 91-214 285-411 (495)
184 PRK09669 putative symporter Ya 99.2 3E-10 6.5E-15 100.7 13.8 153 90-242 34-206 (444)
185 KOG0253 Synaptic vesicle trans 99.2 1E-10 2.3E-15 97.4 9.0 130 109-239 389-518 (528)
186 PRK10133 L-fucose transporter; 99.2 1.5E-09 3.2E-14 96.1 16.7 133 93-228 287-421 (438)
187 TIGR00903 2A0129 major facilit 99.2 1.2E-09 2.5E-14 94.5 14.9 143 90-237 216-362 (368)
188 TIGR00901 2A0125 AmpG-related 99.2 7.9E-10 1.7E-14 95.0 13.4 110 91-200 234-355 (356)
189 PF07690 MFS_1: Major Facilita 99.1 4.3E-10 9.4E-15 96.0 11.5 116 92-207 233-352 (352)
190 PRK10429 melibiose:sodium symp 99.1 5.2E-09 1.1E-13 93.6 18.6 124 91-214 256-391 (473)
191 TIGR00924 yjdL_sub1_fam amino 99.1 2.8E-09 6E-14 95.3 16.1 139 103-241 314-469 (475)
192 TIGR00788 fbt folate/biopterin 99.1 1.8E-09 3.8E-14 96.4 14.5 125 93-217 280-415 (468)
193 COG2807 CynX Cyanate permease 99.1 9.8E-09 2.1E-13 85.7 17.2 149 90-239 232-384 (395)
194 PRK11043 putative transporter; 99.1 1.2E-08 2.6E-13 89.2 18.9 124 90-214 227-355 (401)
195 PRK15034 nitrate/nitrite trans 99.1 9.2E-09 2E-13 90.6 17.3 133 107-239 292-453 (462)
196 PRK11102 bicyclomycin/multidru 99.1 1.4E-08 3.1E-13 87.8 18.3 121 91-212 220-345 (377)
197 KOG3626 Organic anion transpor 99.1 7.4E-10 1.6E-14 100.7 10.5 153 88-240 119-343 (735)
198 PRK10429 melibiose:sodium symp 99.1 4.5E-09 9.7E-14 94.0 15.1 154 90-243 31-204 (473)
199 PF13347 MFS_2: MFS/sugar tran 99.1 4.5E-09 9.8E-14 92.8 14.9 121 93-214 253-382 (428)
200 PRK09669 putative symporter Ya 99.1 1.3E-08 2.9E-13 90.2 17.9 115 100-214 263-386 (444)
201 PF13347 MFS_2: MFS/sugar tran 99.1 5.9E-10 1.3E-14 98.4 9.0 153 90-242 26-200 (428)
202 PF01306 LacY_symp: LacY proto 99.1 1.3E-09 2.8E-14 94.0 10.5 152 91-244 33-192 (412)
203 COG0477 ProP Permeases of the 99.0 7.2E-09 1.6E-13 85.9 14.2 143 90-232 26-177 (338)
204 KOG3762 Predicted transporter 99.0 2.8E-09 6.2E-14 92.9 11.4 148 92-239 397-546 (618)
205 PRK09584 tppB putative tripept 99.0 2.1E-08 4.5E-13 90.3 16.3 139 103-241 318-480 (500)
206 PF03825 Nuc_H_symport: Nucleo 99.0 1.8E-08 3.9E-13 87.8 15.2 152 90-244 26-183 (400)
207 KOG3764 Vesicular amine transp 98.9 4.5E-09 9.8E-14 88.6 8.4 149 91-239 296-453 (464)
208 TIGR00926 2A1704 Peptide:H+ sy 98.9 6.5E-08 1.4E-12 89.0 15.7 149 91-239 13-181 (654)
209 PRK11652 emrD multidrug resist 98.9 2.1E-07 4.5E-12 81.2 18.2 123 91-214 233-358 (394)
210 PRK10207 dipeptide/tripeptide 98.9 4.3E-08 9.4E-13 87.9 13.9 139 103-241 311-477 (489)
211 PRK11462 putative transporter; 98.9 1.2E-07 2.6E-12 84.5 16.6 115 100-214 262-385 (460)
212 KOG2532 Permease of the major 98.9 2.5E-08 5.3E-13 88.3 12.0 145 90-239 283-446 (466)
213 PF03209 PUCC: PUCC protein; 98.9 2.4E-07 5.2E-12 79.1 17.1 146 90-235 233-393 (403)
214 KOG2816 Predicted transporter 98.8 1.3E-07 2.7E-12 83.6 15.2 135 110-247 71-206 (463)
215 TIGR00885 fucP L-fucose:H+ sym 98.8 1.4E-07 3.1E-12 82.8 15.4 126 97-225 265-397 (410)
216 TIGR00886 2A0108 nitrite extru 98.8 2.3E-08 4.9E-13 86.1 8.9 111 91-202 251-365 (366)
217 COG2211 MelB Na+/melibiose sym 98.8 3.3E-07 7.2E-12 80.2 16.0 124 91-214 262-394 (467)
218 PRK11462 putative transporter; 98.8 2.2E-07 4.8E-12 82.8 15.3 153 91-243 35-207 (460)
219 PRK09848 glucuronide transport 98.8 2.2E-07 4.8E-12 82.5 15.2 124 90-213 33-174 (448)
220 KOG4686 Predicted sugar transp 98.8 4.3E-10 9.4E-15 90.7 -2.0 124 90-213 68-195 (459)
221 PF06779 DUF1228: Protein of u 98.8 1.2E-08 2.6E-13 67.6 4.9 74 85-158 11-84 (85)
222 PF06609 TRI12: Fungal trichot 98.8 2.1E-07 4.4E-12 84.2 14.4 109 102-210 350-461 (599)
223 COG0738 FucP Fucose permease [ 98.8 1.7E-07 3.7E-12 79.5 12.6 137 91-230 262-399 (422)
224 PF03092 BT1: BT1 family; Int 98.7 1.7E-07 3.8E-12 82.7 12.4 152 90-242 14-177 (433)
225 PF00083 Sugar_tr: Sugar (and 98.7 6.6E-11 1.4E-15 105.0 -9.5 155 90-246 277-442 (451)
226 PF01770 Folate_carrier: Reduc 98.7 4.4E-06 9.5E-11 72.1 20.2 149 90-239 28-181 (412)
227 PF05978 UNC-93: Ion channel r 98.7 5.9E-07 1.3E-11 67.4 13.1 107 106-213 42-148 (156)
228 PRK15403 multidrug efflux syst 98.7 1.6E-06 3.5E-11 76.2 17.6 143 91-234 244-391 (413)
229 KOG0254 Predicted transporter 98.7 1.3E-06 2.8E-11 79.1 17.0 157 90-247 319-490 (513)
230 TIGR01272 gluP glucose/galacto 98.7 2E-07 4.4E-12 78.7 10.7 90 150-239 6-112 (310)
231 TIGR01301 GPH_sucrose GPH fami 98.7 1.6E-06 3.5E-11 77.0 16.3 140 105-244 309-475 (477)
232 KOG0252 Inorganic phosphate tr 98.7 3.9E-08 8.5E-13 84.5 5.6 132 114-246 361-503 (538)
233 PF03209 PUCC: PUCC protein; 98.6 2.4E-06 5.3E-11 73.0 16.0 126 91-217 5-153 (403)
234 COG2211 MelB Na+/melibiose sym 98.5 3.9E-06 8.4E-11 73.6 13.8 154 91-244 38-211 (467)
235 PF11700 ATG22: Vacuole efflux 98.5 1.6E-05 3.4E-10 71.0 17.3 144 102-245 71-252 (477)
236 KOG0255 Synaptic vesicle trans 98.4 2.9E-05 6.3E-10 70.4 18.4 152 93-247 345-499 (521)
237 KOG2533 Permease of the major 98.4 2E-06 4.4E-11 76.6 10.6 137 90-226 297-442 (495)
238 KOG2816 Predicted transporter 98.4 1.2E-05 2.6E-10 71.2 14.9 123 91-214 267-390 (463)
239 PRK15462 dipeptide/tripeptide 98.3 5.7E-05 1.2E-09 67.6 17.2 137 103-239 310-477 (493)
240 KOG0637 Sucrose transporter an 98.3 5.4E-06 1.2E-10 71.6 10.1 125 90-214 56-203 (498)
241 KOG2615 Permease of the major 98.3 7.6E-06 1.6E-10 69.2 10.5 136 93-228 289-428 (451)
242 PF00854 PTR2: POT family; In 98.2 1.6E-05 3.6E-10 68.9 10.2 108 132-239 2-122 (372)
243 PTZ00207 hypothetical protein; 98.2 3E-05 6.5E-10 70.7 11.9 149 90-240 377-552 (591)
244 PF02487 CLN3: CLN3 protein; 98.1 4.7E-05 1E-09 65.8 12.0 117 96-214 276-395 (402)
245 TIGR00769 AAA ADP/ATP carrier 98.1 0.00071 1.5E-08 60.1 19.2 125 90-214 27-189 (472)
246 PF12832 MFS_1_like: MFS_1 lik 98.0 2.5E-05 5.5E-10 51.3 6.8 53 89-141 23-75 (77)
247 PRK03612 spermidine synthase; 98.0 0.00076 1.7E-08 61.0 17.4 141 91-233 40-190 (521)
248 COG3104 PTR2 Dipeptide/tripept 97.8 0.00053 1.1E-08 60.3 13.3 141 102-242 325-489 (498)
249 PF02487 CLN3: CLN3 protein; 97.8 0.0007 1.5E-08 58.6 13.7 135 103-242 61-197 (402)
250 KOG4332 Predicted sugar transp 97.8 5.5E-05 1.2E-09 61.2 6.2 92 91-183 62-154 (454)
251 KOG1237 H+/oligopeptide sympor 97.8 0.00034 7.5E-09 63.7 11.2 150 90-239 62-244 (571)
252 PF03092 BT1: BT1 family; Int 97.7 0.00083 1.8E-08 59.5 13.1 117 98-214 252-378 (433)
253 COG2270 Permeases of the major 97.7 0.0005 1.1E-08 59.2 11.1 145 100-244 57-224 (438)
254 KOG3098 Uncharacterized conser 97.4 0.00092 2E-08 58.9 8.9 106 107-213 56-161 (461)
255 KOG2563 Permease of the major 97.3 0.00074 1.6E-08 58.6 7.3 151 95-245 295-455 (480)
256 PF06963 FPN1: Ferroportin1 (F 97.3 0.0017 3.7E-08 57.1 9.4 124 91-214 283-416 (432)
257 KOG3098 Uncharacterized conser 97.2 0.033 7.2E-07 49.3 16.1 106 107-213 285-411 (461)
258 PF03137 OATP: Organic Anion T 97.1 0.00012 2.6E-09 66.5 0.0 125 90-214 330-512 (539)
259 KOG1330 Sugar transporter/spin 97.0 0.002 4.3E-08 56.2 6.6 129 91-219 273-417 (493)
260 KOG2325 Predicted transporter/ 96.9 0.0016 3.5E-08 57.7 5.1 81 156-236 389-471 (488)
261 TIGR00939 2a57 Equilibrative N 96.9 0.044 9.5E-07 48.6 13.9 108 104-212 310-430 (437)
262 TIGR00805 oat sodium-independe 96.8 0.0082 1.8E-07 55.9 9.0 125 90-214 355-579 (633)
263 KOG3574 Acetyl-CoA transporter 96.8 0.043 9.4E-07 47.1 12.3 143 47-209 29-188 (510)
264 PF03219 TLC: TLC ATP/ADP tran 96.7 0.36 7.8E-06 43.5 18.7 117 99-215 56-205 (491)
265 COG3202 ATP/ADP translocase [E 96.6 0.35 7.7E-06 43.0 17.4 124 91-214 48-208 (509)
266 KOG3762 Predicted transporter 96.5 0.0029 6.2E-08 56.3 3.8 65 87-151 32-97 (618)
267 KOG3626 Organic anion transpor 96.4 0.017 3.7E-07 53.7 8.4 125 90-214 417-647 (735)
268 PF06963 FPN1: Ferroportin1 (F 96.1 0.49 1.1E-05 41.9 15.6 135 104-239 41-199 (432)
269 KOG1479 Nucleoside transporter 95.0 0.42 9.1E-06 41.6 10.8 108 103-210 284-399 (406)
270 PF01733 Nucleoside_tran: Nucl 94.9 0.0081 1.8E-07 50.8 0.4 106 106-211 187-305 (309)
271 PF13000 Acatn: Acetyl-coenzym 94.8 0.79 1.7E-05 41.0 12.1 122 89-210 23-174 (544)
272 TIGR00806 rfc RFC reduced fola 94.7 0.9 2E-05 40.7 12.5 99 102-200 299-399 (511)
273 PF01770 Folate_carrier: Reduc 94.7 0.79 1.7E-05 40.2 11.9 100 99-198 283-384 (412)
274 KOG3097 Predicted membrane pro 94.7 0.28 6E-06 41.4 8.7 73 111-184 68-140 (390)
275 KOG0637 Sucrose transporter an 94.2 0.14 3E-06 45.0 6.1 130 104-233 335-489 (498)
276 KOG1479 Nucleoside transporter 93.8 4.2 9.1E-05 35.6 14.9 35 153-188 116-150 (406)
277 KOG3810 Micronutrient transpor 93.7 0.33 7.1E-06 41.4 7.2 124 90-214 29-154 (433)
278 TIGR00939 2a57 Equilibrative N 93.5 2.5 5.4E-05 37.7 12.9 51 153-208 105-155 (437)
279 KOG4332 Predicted sugar transp 93.1 3.4 7.4E-05 34.3 11.8 133 103-235 284-426 (454)
280 KOG3880 Predicted small molecu 90.8 0.7 1.5E-05 38.8 5.7 133 104-241 65-200 (409)
281 COG4262 Predicted spermidine s 90.3 11 0.00024 32.5 12.7 85 97-181 39-132 (508)
282 TIGR00769 AAA ADP/ATP carrier 89.8 15 0.00032 33.2 15.8 71 161-231 273-345 (472)
283 KOG3810 Micronutrient transpor 89.4 3.2 7E-05 35.6 8.6 95 104-198 274-370 (433)
284 KOG3880 Predicted small molecu 89.1 2.5 5.4E-05 35.7 7.6 110 101-212 288-400 (409)
285 PF07672 MFS_Mycoplasma: Mycop 88.7 8.5 0.00018 31.6 10.3 103 104-206 144-258 (267)
286 PRK10263 DNA translocase FtsK; 88.2 6.3 0.00014 39.6 10.8 9 62-70 36-44 (1355)
287 PF03219 TLC: TLC ATP/ADP tran 84.5 32 0.00068 31.3 15.9 72 162-233 290-363 (491)
288 PF12805 FUSC-like: FUSC-like 84.3 12 0.00027 31.1 9.6 36 136-171 4-40 (284)
289 PF13000 Acatn: Acetyl-coenzym 80.6 25 0.00054 31.9 10.2 55 158-212 409-463 (544)
290 KOG1237 H+/oligopeptide sympor 78.6 57 0.0012 30.3 14.9 62 153-214 457-518 (571)
291 PF06912 DUF1275: Protein of u 78.5 30 0.00066 27.2 14.3 36 108-143 53-91 (209)
292 PF02694 UPF0060: Uncharacteri 78.0 6.3 0.00014 27.3 4.6 51 101-151 54-104 (107)
293 PF11299 DUF3100: Protein of u 77.0 2.7 5.7E-05 33.5 2.9 108 85-214 123-230 (241)
294 PRK14229 camphor resistance pr 76.8 23 0.00049 24.8 8.9 48 138-185 33-80 (108)
295 COG5336 Uncharacterized protei 75.8 17 0.00036 25.3 6.1 30 107-136 48-78 (116)
296 PRK02237 hypothetical protein; 75.3 11 0.00023 26.2 5.1 50 102-151 57-106 (109)
297 TIGR00926 2A1704 Peptide:H+ sy 74.9 31 0.00068 32.6 9.8 85 153-237 564-649 (654)
298 PF03547 Mem_trans: Membrane t 70.5 71 0.0015 27.7 11.6 15 114-128 8-22 (385)
299 COG2119 Predicted membrane pro 70.2 47 0.001 25.7 8.0 75 52-145 104-178 (190)
300 KOG2601 Iron transporter [Inor 69.6 80 0.0017 27.9 11.7 123 111-233 73-219 (503)
301 PF02632 BioY: BioY family; I 69.2 33 0.00073 25.5 7.1 26 107-132 59-84 (148)
302 TIGR00880 2_A_01_02 Multidrug 68.7 21 0.00046 24.9 6.1 43 102-144 88-130 (141)
303 KOG3574 Acetyl-CoA transporter 68.1 63 0.0014 28.6 9.2 56 159-214 374-429 (510)
304 TIGR01667 YCCS_YHJK integral m 67.7 1.1E+02 0.0023 29.4 11.7 54 120-173 42-100 (701)
305 TIGR00844 c_cpa1 na(+)/h(+) an 67.2 1.3E+02 0.0027 29.3 12.3 32 200-231 111-143 (810)
306 PF07857 DUF1632: CEO family ( 66.2 26 0.00056 28.7 6.5 20 224-243 120-139 (254)
307 PLN02332 membrane bound O-acyl 65.7 1E+02 0.0023 27.8 11.6 33 129-161 339-371 (465)
308 PF10225 DUF2215: Uncharacteri 65.5 51 0.0011 26.9 8.1 32 151-184 31-62 (249)
309 TIGR01666 YCCS hypothetical me 63.1 91 0.002 29.9 10.2 53 121-173 43-100 (704)
310 PF07672 MFS_Mycoplasma: Mycop 62.7 7 0.00015 32.0 2.6 54 186-239 2-61 (267)
311 COG4769 Predicted membrane pro 60.6 34 0.00073 25.9 5.5 52 110-167 82-133 (181)
312 COG1268 BioY Uncharacterized c 60.5 41 0.00088 26.1 6.3 24 107-130 88-111 (184)
313 COG3462 Predicted membrane pro 58.5 6.4 0.00014 27.2 1.4 13 224-236 55-67 (117)
314 PF12273 RCR: Chitin synthesis 58.3 5.2 0.00011 29.0 1.1 21 219-239 1-21 (130)
315 PF11947 DUF3464: Protein of u 56.1 26 0.00056 26.2 4.3 50 153-205 96-145 (153)
316 COG4177 LivM ABC-type branched 55.5 1.3E+02 0.0028 25.6 11.2 60 154-214 208-267 (314)
317 COG2233 UraA Xanthine/uracil p 55.2 1.6E+02 0.0035 26.5 10.7 98 91-188 39-139 (451)
318 PRK14230 camphor resistance pr 54.9 75 0.0016 22.6 8.7 48 137-184 36-83 (119)
319 TIGR03802 Asp_Ala_antiprt aspa 50.7 1.2E+02 0.0026 28.2 8.7 40 103-144 452-491 (562)
320 COG2076 EmrE Membrane transpor 48.6 91 0.002 21.7 8.5 59 116-174 15-74 (106)
321 TIGR03173 pbuX xanthine permea 48.6 1.9E+02 0.0041 25.5 12.6 97 94-191 21-118 (406)
322 PF07760 DUF1616: Protein of u 48.3 1.6E+02 0.0035 24.6 10.3 57 157-214 22-78 (287)
323 TIGR03727 urea_t_UrtC_arc urea 47.6 1.2E+02 0.0026 26.4 7.8 17 198-214 282-298 (364)
324 PF11151 DUF2929: Protein of u 47.3 64 0.0014 19.6 5.6 38 200-237 12-50 (57)
325 PRK10692 hypothetical protein; 46.2 77 0.0017 21.1 4.8 18 130-147 3-20 (92)
326 PF09527 ATPase_gene1: Putativ 45.3 65 0.0014 19.1 5.8 33 109-141 8-41 (55)
327 PF11833 DUF3353: Protein of u 44.0 1.6E+02 0.0034 23.1 7.5 30 185-214 136-165 (194)
328 COG2274 SunT ABC-type bacterio 42.9 3.2E+02 0.0069 26.4 10.4 129 109-238 165-313 (709)
329 PRK03818 putative transporter; 42.3 2.6E+02 0.0056 26.0 9.5 79 103-182 437-516 (552)
330 PF04226 Transgly_assoc: Trans 41.9 71 0.0015 18.6 4.9 37 201-237 6-43 (48)
331 PF03741 TerC: Integral membra 41.7 1.6E+02 0.0035 22.7 8.0 59 169-228 11-69 (183)
332 PRK11715 inner membrane protei 40.9 2.7E+02 0.0058 25.0 11.9 63 127-193 328-390 (436)
333 COG1742 Uncharacterized conser 40.7 31 0.00068 23.8 2.5 49 101-149 55-103 (109)
334 PF10183 ESSS: ESSS subunit of 40.0 46 0.00099 23.1 3.4 30 215-244 56-85 (105)
335 KOG4112 Signal peptidase subun 40.0 83 0.0018 21.2 4.3 27 193-219 26-52 (101)
336 PF15061 DUF4538: Domain of un 40.0 29 0.00062 21.1 2.0 24 216-239 3-26 (58)
337 PRK14214 camphor resistance pr 39.9 1.4E+02 0.0029 21.3 9.2 50 136-185 37-86 (118)
338 TIGR00836 amt ammonium transpo 39.7 2.7E+02 0.0059 24.7 10.2 49 162-210 283-331 (403)
339 PRK14200 camphor resistance pr 39.7 1.4E+02 0.0031 21.5 10.1 49 137-185 40-93 (127)
340 PRK14199 camphor resistance pr 39.6 1.4E+02 0.0031 21.5 9.9 50 136-185 39-93 (128)
341 PF13829 DUF4191: Domain of un 39.5 77 0.0017 25.4 4.9 37 202-238 33-71 (224)
342 PF06123 CreD: Inner membrane 38.9 2.9E+02 0.0063 24.8 12.2 63 127-193 322-384 (430)
343 PLN02776 prenyltransferase 38.6 2.6E+02 0.0056 24.2 9.2 15 200-214 128-144 (341)
344 PRK14220 camphor resistance pr 38.6 1.4E+02 0.0031 21.2 8.3 48 137-184 38-85 (120)
345 PF06341 DUF1056: Protein of u 38.0 1E+02 0.0022 19.2 4.4 35 153-188 27-61 (63)
346 TIGR02230 ATPase_gene1 F0F1-AT 37.9 1.4E+02 0.0029 20.7 6.5 34 194-227 47-85 (100)
347 PF06826 Asp-Al_Ex: Predicted 37.5 1.9E+02 0.004 22.1 9.5 80 101-182 56-136 (169)
348 PF10762 DUF2583: Protein of u 36.5 1E+02 0.0022 20.4 4.2 18 130-147 3-20 (89)
349 PF02990 EMP70: Endomembrane p 36.4 1.5E+02 0.0033 27.2 7.1 16 156-171 301-316 (521)
350 COG3202 ATP/ADP translocase [E 36.4 3.4E+02 0.0074 24.9 15.6 74 162-235 292-368 (509)
351 KOG3097 Predicted membrane pro 36.4 75 0.0016 27.4 4.6 44 99-142 308-351 (390)
352 PRK04972 putative transporter; 35.0 3.7E+02 0.008 25.0 9.4 25 102-126 63-87 (558)
353 PRK04972 putative transporter; 34.9 3.4E+02 0.0075 25.2 9.1 16 169-184 512-527 (558)
354 COG1480 Predicted membrane-ass 34.5 3.6E+02 0.0078 25.7 8.9 28 118-145 387-414 (700)
355 PF10785 NADH-u_ox-rdase: NADH 34.4 1.4E+02 0.0031 19.9 5.6 51 98-153 20-77 (86)
356 PF06570 DUF1129: Protein of u 34.1 2.3E+02 0.005 22.2 11.6 23 217-239 175-197 (206)
357 PRK14232 camphor resistance pr 33.9 1.7E+02 0.0038 20.8 9.2 49 137-185 36-84 (120)
358 PF11298 DUF3099: Protein of u 33.9 62 0.0013 20.8 3.0 31 124-154 10-40 (73)
359 PF06779 DUF1228: Protein of u 33.7 1.4E+02 0.0031 19.8 8.1 61 165-228 5-66 (85)
360 PF04346 EutH: Ethanolamine ut 33.6 3.2E+02 0.0069 23.7 12.2 105 116-222 61-169 (354)
361 PF06783 UPF0239: Uncharacteri 33.3 78 0.0017 21.0 3.4 23 218-240 22-44 (85)
362 PRK14228 camphor resistance pr 33.0 1.8E+02 0.004 20.7 9.8 49 137-185 40-88 (122)
363 PF04550 Phage_holin_2: Phage 32.4 1.6E+02 0.0034 19.8 5.9 33 153-185 30-62 (89)
364 PRK10720 uracil transporter; P 32.1 3.7E+02 0.008 24.0 10.9 12 130-141 301-312 (428)
365 PF07857 DUF1632: CEO family ( 32.0 1.1E+02 0.0023 25.2 4.8 14 98-111 215-228 (254)
366 PRK10457 hypothetical protein; 31.7 1.5E+02 0.0033 19.5 6.7 36 199-234 36-74 (82)
367 COG5202 Predicted membrane pro 31.7 3.5E+02 0.0075 23.6 9.4 99 127-230 345-455 (512)
368 COG0598 CorA Mg2+ and Co2+ tra 31.7 83 0.0018 26.7 4.4 25 216-240 292-316 (322)
369 PTZ00370 STEVOR; Provisional 31.6 2.4E+02 0.0051 23.6 6.6 13 217-229 256-268 (296)
370 PRK14211 camphor resistance pr 31.4 1.9E+02 0.0041 20.4 8.1 47 138-184 35-81 (114)
371 TIGR02230 ATPase_gene1 F0F1-AT 30.8 1.8E+02 0.0039 20.0 6.5 29 113-141 54-83 (100)
372 COG5547 Small integral membran 30.8 1.3E+02 0.0028 18.3 5.3 39 132-170 9-47 (62)
373 TIGR00383 corA magnesium Mg(2+ 30.5 1.4E+02 0.0031 25.0 5.7 24 216-239 288-311 (318)
374 PRK13108 prolipoprotein diacyl 30.1 4.2E+02 0.0091 24.0 8.9 34 97-130 17-50 (460)
375 PF09605 Trep_Strep: Hypotheti 29.6 2.7E+02 0.0058 21.6 10.6 56 108-166 35-90 (186)
376 PRK09546 zntB zinc transporter 29.5 1.3E+02 0.0029 25.5 5.3 29 208-236 279-314 (324)
377 TIGR02185 Trep_Strep conserved 29.2 2.7E+02 0.0059 21.6 10.8 55 109-166 38-92 (189)
378 PRK14205 camphor resistance pr 29.0 2.1E+02 0.0046 20.3 9.2 50 137-186 37-86 (118)
379 PF14851 FAM176: FAM176 family 28.2 1.3E+02 0.0029 22.5 4.4 29 155-183 19-47 (153)
380 PF13937 DUF4212: Domain of un 28.2 1.8E+02 0.0039 19.1 6.2 38 201-238 24-64 (81)
381 PRK14206 camphor resistance pr 28.1 2.3E+02 0.005 20.4 9.9 48 137-184 36-90 (127)
382 KOG4830 Predicted sugar transp 27.9 3.1E+02 0.0068 23.0 6.7 96 91-186 227-325 (412)
383 KOG2881 Predicted membrane pro 27.7 65 0.0014 26.5 2.8 33 114-146 253-285 (294)
384 PF07456 Hpre_diP_synt_I: Hept 27.6 2.6E+02 0.0057 20.8 6.1 51 108-164 68-118 (148)
385 PF00860 Xan_ur_permease: Perm 27.2 3.6E+02 0.0078 23.6 7.7 94 95-192 28-128 (389)
386 KOG1277 Endosomal membrane pro 27.0 1.6E+02 0.0035 26.5 5.2 31 103-133 325-360 (593)
387 TIGR00801 ncs2 uracil-xanthine 26.6 4.6E+02 0.0099 23.3 11.3 97 93-191 30-131 (415)
388 PF09911 DUF2140: Uncharacteri 26.6 45 0.00098 25.9 1.8 19 217-235 2-20 (187)
389 PRK14222 camphor resistance pr 26.3 2.5E+02 0.0053 20.1 10.0 48 137-184 37-89 (124)
390 PRK14219 camphor resistance pr 26.2 2.6E+02 0.0056 20.3 10.5 48 137-184 36-88 (132)
391 COG3619 Predicted membrane pro 26.0 3.5E+02 0.0077 21.8 17.8 31 100-130 54-84 (226)
392 PRK14212 camphor resistance pr 25.6 2.6E+02 0.0057 20.1 9.9 49 137-185 37-90 (128)
393 PF10101 DUF2339: Predicted me 25.5 6.1E+02 0.013 24.4 10.7 46 128-173 1-48 (745)
394 PRK14227 camphor resistance pr 25.3 2.6E+02 0.0056 20.0 9.9 49 137-185 37-90 (124)
395 PTZ00265 multidrug resistance 25.3 8.5E+02 0.018 26.0 14.6 16 113-128 75-90 (1466)
396 TIGR00930 2a30 K-Cl cotranspor 24.9 7.3E+02 0.016 25.0 10.0 8 216-223 517-524 (953)
397 PRK14196 chromosome condensati 24.7 2.7E+02 0.0059 20.0 9.4 50 136-185 36-90 (127)
398 KOG2704 Predicted membrane pro 24.5 5.3E+02 0.011 23.3 8.1 28 134-161 348-375 (480)
399 TIGR00927 2A1904 K+-dependent 24.2 4.1E+02 0.0089 26.7 7.7 13 92-104 959-971 (1096)
400 PRK11085 magnesium/nickel/coba 24.2 1.9E+02 0.0041 24.6 5.2 23 216-238 286-308 (316)
401 TIGR02865 spore_II_E stage II 24.1 5.7E+02 0.012 25.0 8.9 45 158-203 187-231 (764)
402 PRK12847 ubiA 4-hydroxybenzoat 24.1 4.2E+02 0.0091 22.0 8.9 15 134-148 95-109 (285)
403 PRK14201 camphor resistance pr 23.9 2.7E+02 0.0059 19.8 8.9 48 137-184 33-85 (121)
404 PRK14234 camphor resistance pr 23.9 2.8E+02 0.006 19.9 9.9 48 137-184 38-90 (124)
405 PRK14231 camphor resistance pr 23.8 2.9E+02 0.0062 20.0 9.1 48 137-184 33-85 (129)
406 COG3448 CBS-domain-containing 23.6 91 0.002 26.3 3.0 32 208-239 138-170 (382)
407 PF11947 DUF3464: Protein of u 23.6 98 0.0021 23.2 3.0 35 96-131 92-126 (153)
408 PRK10666 ammonium transporter; 22.7 5.6E+02 0.012 23.0 10.5 49 162-210 307-355 (428)
409 PRK03818 putative transporter; 22.6 6.3E+02 0.014 23.5 8.6 18 113-130 35-52 (552)
410 PRK14195 camphor resistance pr 22.5 3E+02 0.0065 19.7 9.7 48 137-184 37-89 (125)
411 PLN02878 homogentisate phytylt 22.3 4.7E+02 0.01 21.9 8.4 73 127-200 195-267 (280)
412 TIGR03644 marine_trans_1 proba 22.2 5.6E+02 0.012 22.8 15.6 47 163-210 298-344 (404)
413 PF11677 DUF3273: Protein of u 22.0 4.6E+02 0.0099 21.7 11.5 155 104-263 73-256 (265)
414 PF00854 PTR2: POT family; In 21.9 3.1E+02 0.0067 23.6 6.3 48 104-151 75-122 (372)
415 PF04281 Tom22: Mitochondrial 21.8 3.3E+02 0.0072 20.0 6.2 23 179-201 60-82 (137)
416 PF13940 Ldr_toxin: Toxin Ldr, 21.5 1.5E+02 0.0032 15.8 2.6 20 108-127 15-34 (35)
417 PF01733 Nucleoside_tran: Nucl 21.5 31 0.00067 29.0 0.0 41 162-207 5-45 (309)
418 PF05631 DUF791: Protein of un 21.2 5.5E+02 0.012 22.3 15.0 116 97-212 154-300 (354)
419 COG3389 Uncharacterized protei 21.0 3.8E+02 0.0082 21.7 5.8 31 107-137 34-64 (277)
420 TIGR01625 YidE_YbjL_dupl AspT/ 20.4 3.8E+02 0.0082 20.1 6.8 26 101-126 56-81 (154)
421 PRK14226 camphor resistance pr 20.2 3.5E+02 0.0075 19.6 9.3 48 137-184 37-93 (130)
No 1
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=8.4e-25 Score=191.57 Aligned_cols=183 Identities=17% Similarity=0.292 Sum_probs=166.1
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhh
Q 023849 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (276)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 125 (276)
.+|+.+..+++.++..++|+..++... |.+++|+|++..+.+++.+.+.+++.+++++.|++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~-----------------~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~ 67 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAG-----------------LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIML 67 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHH-----------------HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 356778888888999999999988743 689999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH
Q 023849 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 126 d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
||+|||+++..+.++..++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++
T Consensus 68 dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 68 AIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc-------ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 206 GYVYGGWVG-------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 206 g~~~~~~l~-------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
++.+++++. ..|||+.|++.+++.++..++.+++.||+++
T Consensus 148 ~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 148 GLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999998875 2599999999988887776666666677654
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.8e-24 Score=183.11 Aligned_cols=154 Identities=23% Similarity=0.379 Sum_probs=150.4
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+|+|++..+.|+..+.|.+++.+++++...+.||+.||++++..+.+++++.+++++++||+.++++|++.|+.
T Consensus 35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a 114 (394)
T COG2814 35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLA 114 (394)
T ss_pred chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
.|.+++...++..+..|+++|++++++..++..++.++|.+++.++. .+|||++|++.+.++++.++..+...|
T Consensus 115 ~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 115 HGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999 999999999999999999888888888
No 3
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.8e-26 Score=192.53 Aligned_cols=188 Identities=40% Similarity=0.740 Sum_probs=175.2
Q ss_pred CCCCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHH
Q 023849 42 PSWFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIF 121 (276)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 121 (276)
...+..++.+.++++..++.++|++.+...+ +.+++.||++++..|++.+.+.+.+.+++|++
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~-----------------~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~ 88 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVL-----------------KEVQTYFNISDSELGLLQTVFIVVFMIASPLF 88 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhh-----------------HHHHHhcCCCchhccchhHHHHHHHHHHHHHH
Confidence 5566677788999999999999999987633 68999999999999999999999999999999
Q ss_pred HHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh
Q 023849 122 ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (276)
Q Consensus 122 g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 201 (276)
|+++||+.||+++.+|..++.++.+.++++..+|++.++|.+.|+|.+...++++++++|.+|..+|++++++++.+..+
T Consensus 89 gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv 168 (493)
T KOG1330|consen 89 GYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV 168 (493)
T ss_pred HHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhhcccccCC
Q 023849 202 GYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (276)
Q Consensus 202 g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (276)
|..+|.+++..+. ...|||.|+..+++.+++.++.+++.+|+++.
T Consensus 169 GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 169 GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 9999999999998 44499999999999999999998887776653
No 4
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=3.8e-24 Score=191.64 Aligned_cols=181 Identities=18% Similarity=0.190 Sum_probs=163.8
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
.+..+..+++..++...|.+.++.. +|.+.+++|.+..+.+|+.+.|.+++.++.++.|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a-----------------~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D 66 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA-----------------APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD 66 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889999999999988873 48999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcC-cchhhhHHHHHHHHHhhhhhhH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
|+|||+++.++.++++++.+++++++|++.++++|+++|+|.+...+.....+.+.+ |+++|++++|++.....+|..+
T Consensus 67 ~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 67 RIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998888888887765 6799999999999999999999
Q ss_pred HHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 206 GYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 206 g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
||.+++++. +.+|||.|++...+.++..++.+++.|+++
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999 889999999988877777666666666643
No 5
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.3e-24 Score=182.25 Aligned_cols=183 Identities=19% Similarity=0.238 Sum_probs=170.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
+++++..+++.+...++.+-.++.. +|.+.++.++|.+|.|.+.+.+.+.+.++..+.|.++|
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a-----------------~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD 89 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLA-----------------MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSD 89 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhc-----------------cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 3456788889999999999998874 48999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (276)
|.++|..+..++++.++..++++++++++.+.++.++.|+.+|..+|.+...++.|+++++||+..++++++.++|+.+.
T Consensus 90 r~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~ 169 (448)
T COG2271 90 RSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALA 169 (448)
T ss_pred cCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH--Hhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccCC
Q 023849 207 YVYG--GWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (276)
Q Consensus 207 ~~~~--~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (276)
|++. +++. +.+||..|++.++++++..++.++..+++|..
T Consensus 170 ~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 170 PLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 9888 7777 88999999999999999988888876666544
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=3.9e-24 Score=196.71 Aligned_cols=185 Identities=15% Similarity=0.159 Sum_probs=158.2
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHh
Q 023849 45 FTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASL 124 (276)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l 124 (276)
+..|+++++++++.+...++...++. ++|.+.+++|++..+.+++.+++.++.+++++++|++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~-----------------ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~L 225 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGF-----------------VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGL 225 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455566666777777777666654 3478899999999999999999999999999999999
Q ss_pred hhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhh
Q 023849 125 ARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYA 204 (276)
Q Consensus 125 ~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 204 (276)
+||+|||+++++++++.+++.++++++++++.++++|++.|++.++..+...+++.|++|+++|++.++++.++..+|.+
T Consensus 226 sDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i 305 (742)
T TIGR01299 226 ADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI 305 (742)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-c-------------cchhHHHHHhHHHHHHHHHHHHhhcccccCCC
Q 023849 205 IGYVYGGWVG-H-------------YNWRYAFWGEAILMFPFAVLGFVMKPLQLKGF 247 (276)
Q Consensus 205 ~g~~~~~~l~-~-------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (276)
+++.++..+. . .+||+.+++.+++.++. ++.+++.||+|++.
T Consensus 306 la~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL 361 (742)
T TIGR01299 306 YAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFF 361 (742)
T ss_pred HHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHH
Confidence 9988776554 2 36899998877765444 45556679988764
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.91 E-value=8.9e-23 Score=177.59 Aligned_cols=156 Identities=19% Similarity=0.234 Sum_probs=144.3
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.+..+.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++++++++++.++++|+++|++
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 110 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA 110 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
.+...+...+++.|++|+++|++++|+...+..+|.+++|++++.+. ..|||+.|++.+++.++..+..+...|+.
T Consensus 111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99989999999999999999999999999999999999999999988 78999999999988777666555555553
No 8
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=2.8e-22 Score=174.62 Aligned_cols=155 Identities=17% Similarity=0.192 Sum_probs=142.2
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+|.+.+++|+++.+.++..+.+.++..+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|++.|++.
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 122 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL 122 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
+...+...+++.|++|+++|++++++.....++|.+++|.+++.+. ..+||+.|++.+++.+++.+......|+.
T Consensus 123 g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 123 GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999999999999999999999998 78999999998877665554444444554
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.90 E-value=5.5e-23 Score=177.16 Aligned_cols=159 Identities=11% Similarity=0.048 Sum_probs=136.8
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
|++|.+++|+|++..+.|++.+.+.+++++++++.|+++||+|||+++..+......+.+.....++++.++++|++.|+
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~ 91 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAAL 91 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 46689999999999999999999999999999999999999999988766655555544333333799999999999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
+.+. .......++|++|+++|++++++.+.+..+|.++++++++++. +.|||+.|++.+++.++..++.++..||+++
T Consensus 92 g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 92 GQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9886 4556667799999999999999999999999999999999998 8899999999999888877777777787654
Q ss_pred C
Q 023849 246 G 246 (276)
Q Consensus 246 ~ 246 (276)
+
T Consensus 171 ~ 171 (368)
T TIGR00903 171 Q 171 (368)
T ss_pred C
Confidence 4
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.90 E-value=6.1e-23 Score=181.05 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=157.0
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc
Q 023849 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (276)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~ 127 (276)
++.+...++.++..++++..++. .+|.+.+++|++..+.+++.+.+.+++.+++++.|+++||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 84 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNA-----------------AMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR 84 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHH-----------------hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh
Confidence 34555566667777666665554 3478899999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHH
Q 023849 128 VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (276)
Q Consensus 128 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (276)
+|||+++.++.++.+++.++++++++++.+++.|++.|++.|...+....++.|++|+++|++++++++.+..+|.+++|
T Consensus 85 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 164 (434)
T PRK11663 85 SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP 164 (434)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred HHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 208 VYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 208 ~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+.+++. ..+||+.|++.+++.++..+...++.++++
T Consensus 165 ~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p 202 (434)
T PRK11663 165 LVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKP 202 (434)
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999988 889999999988877665555554545543
No 11
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.90 E-value=2.1e-22 Score=176.46 Aligned_cols=158 Identities=15% Similarity=0.150 Sum_probs=144.3
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
|.+|.+.+++|.+..+.++..+++.+++++++++.|+++||+|||+++..+.++.+++.+++.++++++.++++|+++|+
T Consensus 37 p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi 116 (413)
T PRK15403 37 PGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGT 116 (413)
T ss_pred cCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
+.+...+....++.|++|+++|++.+++......+|..+||.+++.+. ..|||+.|++.+++.++..+..++..||++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 117 SICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 988777777888999999999999999999999999999999999988 789999999999887776665555566653
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=1.9e-22 Score=176.34 Aligned_cols=183 Identities=19% Similarity=0.242 Sum_probs=160.9
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhh
Q 023849 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (276)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 125 (276)
+.+..+.++++..+..+++...++. ..|.+.+++|.++.+.+++.+.+.++..+++++.|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 74 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGV-----------------AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLA 74 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777778888888777765 33789999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH
Q 023849 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 126 d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 75 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 154 (406)
T PRK11551 75 DRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL 154 (406)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 206 GYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 206 g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
++.+++.+. ..+||+.|++.+++.++..++..++.||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 195 (406)
T PRK11551 155 ASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRA 195 (406)
T ss_pred HHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 999988887 7899999999887666665555555566543
No 13
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.89 E-value=2.7e-22 Score=174.75 Aligned_cols=182 Identities=15% Similarity=0.183 Sum_probs=158.1
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHh
Q 023849 45 FTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASL 124 (276)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l 124 (276)
+.+++.+..+++.++..+++...++. +.|.+++++|++..+.+++.+.+.++..+++++.|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l 70 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVAL-----------------VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLW 70 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777888888888888887765 3478999999999999999999999999999999999
Q ss_pred hhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhh
Q 023849 125 ARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYA 204 (276)
Q Consensus 125 ~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 204 (276)
+||+|||+++.++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.+
T Consensus 71 ~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (405)
T TIGR00891 71 GDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAV 150 (405)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc-ccc--hhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 205 IGYVYGGWVG-HYN--WRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 205 ~g~~~~~~l~-~~~--w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
+++.+++.+. ..+ ||+.|++.++..++. ++.....||++
T Consensus 151 ~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~ 192 (405)
T TIGR00891 151 VAAQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 9999998887 444 999998866554433 33333445543
No 14
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=2.6e-22 Score=179.31 Aligned_cols=177 Identities=20% Similarity=0.372 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC
Q 023849 50 LLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN 129 (276)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g 129 (276)
.+..+++..+...++...... .+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 65 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNV-----------------AIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFG 65 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhC
Confidence 455666777777777776654 347999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHH
Q 023849 130 PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVY 209 (276)
Q Consensus 130 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 209 (276)
||+++.++.++.+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+
T Consensus 66 ~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 66 TRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 210 GGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 210 ~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
++++. +.+||+.|++.+++.++..++.+++.|++
T Consensus 146 ~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 146 GGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred HhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 99998 88999999999888777766666665553
No 15
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=9.3e-22 Score=170.74 Aligned_cols=157 Identities=18% Similarity=0.270 Sum_probs=144.4
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+++++|.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 25 ~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~ 104 (382)
T PRK10091 25 VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFP 104 (382)
T ss_pred ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+....++.+++|+++|+++++++..+..+|..++|.+++++. ..+||++|++.+++.++..+..++..|+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99988888889999999999999999999999999999999999988 789999999999887776666555566643
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=3.8e-22 Score=172.69 Aligned_cols=157 Identities=24% Similarity=0.325 Sum_probs=145.0
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
..|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++++++.++++|++.|++
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 95 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAA 95 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+....++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..+..+++.|+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 96 EAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPP 173 (399)
T ss_pred HHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCC
Confidence 99999999999999999999999999999999999999999999887 889999999998887776666665555543
No 17
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.89 E-value=8.1e-22 Score=175.42 Aligned_cols=202 Identities=17% Similarity=0.189 Sum_probs=162.2
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCC-----CCCCccccccccCCCchhHHHHHHHHHHHHHHHH
Q 023849 44 WFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANG-----TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVAS 118 (276)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 118 (276)
.+.++.+..++++++...+.|+..++.......-.+.++.. ..+.......+++++..+.|++.+.+.+++.+++
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHH
Confidence 34455667777788888899999888765322111111100 0111122233789999999999999999999999
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHH
Q 023849 119 PIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFY 196 (276)
Q Consensus 119 ~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 196 (276)
++.|+++||+|||+++.++.++.+++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999998888876544 468889999999999999999999999999999999999999999
Q ss_pred HHhhhhhhHHHHHHHhhc-c-cchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 197 MCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 197 ~~~~~g~~~g~~~~~~l~-~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
.+..+|.+++|++++.+. . .+||+.|++.+++.++..++.+++.+++++
T Consensus 174 ~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 174 SGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999988 6 499999999999887777666666555443
No 18
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=1.1e-21 Score=170.02 Aligned_cols=157 Identities=15% Similarity=0.239 Sum_probs=145.2
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.+..+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++.++++++.+++.|++.|++
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 106 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFG 106 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 55789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..+..++..||.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 107 ASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred hhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999888 789999999988887777666666556543
No 19
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.88 E-value=5.7e-22 Score=176.92 Aligned_cols=181 Identities=16% Similarity=0.231 Sum_probs=148.1
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCcccccccc--------CCCchhHHHHHHHHHHHHHHHH
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDF--------DLNNFQDGVLSSAFMVGLLVAS 118 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~ 118 (276)
..+...++.++.+...++...++. .++.++++| +.+..+.+++.+.+.++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~ 72 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISG-----------------TVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGG 72 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehH-----------------hHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHH
Confidence 345556666677777776666554 224555554 8889999999999999999999
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh------------hhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcch
Q 023849 119 PIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------------FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA 186 (276)
Q Consensus 119 ~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 186 (276)
+++|+++||+|||+++.++.++++++.++++++ ..+..++++|+++|++.|...+...++++|++|++
T Consensus 73 ~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~ 152 (479)
T PRK10077 73 ALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH 152 (479)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh
Confidence 999999999999999999999999888877763 23567889999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhhhhhHHHHHHHhhc---------ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 187 KKTAWLGVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 187 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
+|++++++.+.+..+|.++++.+++.+. ..+||+.|++.+++.++..+. .++.||+++
T Consensus 153 ~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~ 219 (479)
T PRK10077 153 IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPR 219 (479)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcH
Confidence 9999999999999999999888766542 468999999988877665544 445677654
No 20
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=7.3e-23 Score=182.20 Aligned_cols=180 Identities=15% Similarity=0.130 Sum_probs=154.7
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
.++++..+++.+++.+.++..++.. +|.+.+++|++..+.|++.+.+.+++.+++++.|+++|
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~-----------------~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D 89 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAA-----------------QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD 89 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhh-----------------hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 4556777788888889999888753 47899999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 201 (276)
|+|||+++.++.++.++..+..++ +++++.+++.|++.|++.+...+....++.|++|+++||+++|+++.+.++
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l 169 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL 169 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch
Confidence 999999998888877776665554 589999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhhc-c---cchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 202 GYAIGYVYGGWVG-H---YNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 202 g~~~g~~~~~~l~-~---~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
|.++++++..++. . .+||..|.+.+++.++..++.+++.++.
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~ 215 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS 215 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999998887665 3 2699999988888777666666554443
No 21
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.88 E-value=1.1e-21 Score=167.70 Aligned_cols=153 Identities=27% Similarity=0.485 Sum_probs=138.8
Q ss_pred c-ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 T-GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
| .+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++..++++.+.+++.|++.|++.
T Consensus 20 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 99 (352)
T PF07690_consen 20 PLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGS 99 (352)
T ss_dssp H-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccc
Confidence 5 788999999999999999999999999999999999999999999999999999666667688889999999999999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
+...+....++.|++|+++|++++++.+....+|.+++|.+++.+. ..+||+.|++.+++.++..++..++.++
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 174 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPE 174 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC--
T ss_pred ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhh
Confidence 9999999999999999999999999999999999999999999998 8899999999999888877654444443
No 22
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.88 E-value=1.7e-21 Score=171.78 Aligned_cols=169 Identities=13% Similarity=0.085 Sum_probs=137.1
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccC---CCchhHHHHH---HHHHHHHHHHHhH
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFD---LNNFQDGVLS---SAFMVGLLVASPI 120 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~i~~~~ 120 (276)
+++.+...++.+++.++|...++... |.+.++++ .+..+.+... +...++..+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~-----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~ 82 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCS-----------------LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWL 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666678888999998887643 68888884 4555444444 4444555599999
Q ss_pred HHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHH
Q 023849 121 FASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWL 192 (276)
Q Consensus 121 ~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 192 (276)
+|+++||+|||+++.++.++++++.+++++++++. .++++|+++|++.|..++...++++|++|+++|+++.
T Consensus 83 ~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~ 162 (432)
T PRK10406 83 FGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYA 162 (432)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHH
Confidence 99999999999999999999999999999988764 6889999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhHHHHHHHhhc---------ccchhHHHHHhHHHHHHH
Q 023849 193 GVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPF 232 (276)
Q Consensus 193 ~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~~~~~~~~~~~~ 232 (276)
++.+.+...|.++++.+...+. .+|||++|++.+++.++.
T Consensus 163 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 163 SFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 9998888888888877654442 479999999877766543
No 23
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=1.8e-21 Score=171.25 Aligned_cols=165 Identities=18% Similarity=0.227 Sum_probs=148.8
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhh
Q 023849 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (276)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 125 (276)
.+++.+..+.+.++...++...... .+|.+.+++|+++.+.+++.+++.+++.+++++.|+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~ 77 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFY-----------------IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLA 77 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566677777777777766654 34788999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH
Q 023849 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 126 d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
||+|||+++.++.++.+++.++++++++++.++++|++.|++.+..++....++.|++|+++|+++.++...+..+|.++
T Consensus 78 dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~ 157 (426)
T PRK12307 78 DKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII 157 (426)
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc-ccchhHHHHHhHH
Q 023849 206 GYVYGGWVG-HYNWRYAFWGEAI 227 (276)
Q Consensus 206 g~~~~~~l~-~~~w~~~~~~~~~ 227 (276)
++.+.+.+. ..+||+.|++..+
T Consensus 158 ~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 158 AAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHHHHHcccCCHHHHHHHHHH
Confidence 999988887 7899999988544
No 24
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.87 E-value=1.5e-21 Score=168.22 Aligned_cols=154 Identities=16% Similarity=0.072 Sum_probs=138.0
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.++++|++.|++
T Consensus 25 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 104 (377)
T TIGR00890 25 LAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAG 104 (377)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
.+..++.....+.+++| ++|+++.++...+..+|..+++++.+.+. ..+||+.|++.+++.++..+..+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 105 VGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 99988888888999987 67999999999999999887665555555 7899999999998887777666655443
No 25
>PRK03699 putative transporter; Provisional
Probab=99.87 E-value=5.6e-21 Score=166.54 Aligned_cols=174 Identities=16% Similarity=0.102 Sum_probs=151.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
+++....+++.++....+...++. .+|.+.+++|++..+.+++.+.+.+++.+++++.|++.|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~-----------------~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~d 67 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGM-----------------VMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLME 67 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhh-----------------hhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666666677776666555554 447899999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (276)
|+|||+++.++.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++++..+....+|..++
T Consensus 68 r~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 147 (394)
T PRK03699 68 IIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIF 147 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred HHHHHhhc--ccchhHHHHHhHHHHHHHHHHHH
Q 023849 207 YVYGGWVG--HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 207 ~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
|.+.+.+. ..+||+.|++.+++.++..++.+
T Consensus 148 ~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 148 PIIAAYLLARSIEWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 99888775 57999999998887766554443
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.87 E-value=1.3e-21 Score=173.62 Aligned_cols=155 Identities=18% Similarity=0.265 Sum_probs=132.8
Q ss_pred ccccccccCCC--------chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---hHHHH
Q 023849 89 GTGIQGDFDLN--------NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMI 157 (276)
Q Consensus 89 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~ 157 (276)
++.+..+++.+ ..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++.+.. +++.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (481)
T TIGR00879 51 LALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEML 130 (481)
T ss_pred hhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHH
Confidence 35667777666 88999999999999999999999999999999999999999999988885543 45689
Q ss_pred HHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH---Hhhc-ccchhHHHHHhHHHHHHHH
Q 023849 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG---GWVG-HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 158 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~---~~l~-~~~w~~~~~~~~~~~~~~~ 233 (276)
+++|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++.++ .... ..+||+.|++.++..++..
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 6655 7899999999666554443
Q ss_pred HHHHhhccccc
Q 023849 234 VLGFVMKPLQL 244 (276)
Q Consensus 234 ~~~~~~~~~~~ 244 (276)
+..++.||++
T Consensus 211 -~~~~~l~~~~ 220 (481)
T TIGR00879 211 -LGLFFLPESP 220 (481)
T ss_pred -HHHhcCCCCh
Confidence 3344456554
No 27
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.87 E-value=3e-21 Score=172.79 Aligned_cols=180 Identities=12% Similarity=0.127 Sum_probs=144.6
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchh-HHH-----HHHHHHHHHHHHHhHH
Q 023849 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQ-DGV-----LSSAFMVGLLVASPIF 121 (276)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~i~~~~~ 121 (276)
++.+....+++++.++|...++.. .|.+.++++.+... .++ +.++..+++.++++++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~ 77 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFV-----------------AYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFF 77 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888999998887763 36888888643322 122 2477788999999999
Q ss_pred HHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHH--------HHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHH
Q 023849 122 ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWM--------IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLG 193 (276)
Q Consensus 122 g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 193 (276)
|+++||+|||+++.++.++++++.+++++++++.. ++++|+++|++.|..++....+++|++|+++||++.+
T Consensus 78 G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~ 157 (490)
T PRK10642 78 GMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGS 157 (490)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999999999874 8899999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHhhc---------ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 194 VFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 194 ~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
+...+..+|..+|+.+...+. ++|||++|++.+++.++ .+++....||+++
T Consensus 158 ~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~ 217 (490)
T PRK10642 158 WLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPA 217 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChh
Confidence 999888888888776554332 47999999997665543 3333344566654
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.87 E-value=6.7e-21 Score=165.97 Aligned_cols=145 Identities=13% Similarity=0.108 Sum_probs=134.0
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
+++|.+++++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.++++++++++.++++|+++|+
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gi 109 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGV 109 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-cchhHHHHHhHHHHHHH
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPF 232 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~~~~~~~~~~~~ 232 (276)
+.+...+....++.+++| ++|+++++++..+..+|..+++.+++++. + .+||+.+.+.++..++.
T Consensus 110 g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 110 GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 999999999999999997 88999999999999999999999999887 4 48999887766655443
No 29
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.87 E-value=2.8e-21 Score=173.54 Aligned_cols=185 Identities=18% Similarity=0.124 Sum_probs=152.4
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccc-----cCCCchhHHHHHHHHHHHHHHHHh
Q 023849 45 FTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGD-----FDLNNFQDGVLSSAFMVGLLVASP 119 (276)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~ 119 (276)
+..++.+.++.+..+...++...++... |.+..+ .+.+..+.+++.+.+.++.+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~ 74 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVT-----------------KMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQL 74 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777788888888887776532 344432 245566779999999999999999
Q ss_pred HHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHH
Q 023849 120 IFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS------FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLG 193 (276)
Q Consensus 120 ~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 193 (276)
++|+++||+|||+++.++.++..++.++++++++ ++.++++|++.|++.|...+....++.|++|+++|+++++
T Consensus 75 ~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~ 154 (502)
T TIGR00887 75 FFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMA 154 (502)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHH
Confidence 9999999999999999999999999998888765 7899999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHhhc------------------------ccchhHHHHHhHHHHHHHHHHHHhhcccccCCC
Q 023849 194 VFYMCLPSGYAIGYVYGGWVG------------------------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGF 247 (276)
Q Consensus 194 ~~~~~~~~g~~~g~~~~~~l~------------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (276)
+.+.+..+|.++++.++..+. .++||+.+.+.+++.++.. +..++.||++++.
T Consensus 155 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESpr~l 231 (502)
T TIGR00887 155 AVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL-YFRLTIPETPRYT 231 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH-HHHHhCCCCHHHH
Confidence 999999999999988876542 2479999988777665443 3345679988764
No 30
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.87 E-value=4.8e-21 Score=167.54 Aligned_cols=157 Identities=14% Similarity=0.088 Sum_probs=142.3
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||+++.++..+.+++.+++.++++++.+++.|++.|++
T Consensus 35 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 114 (406)
T PRK15402 35 GMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIG 114 (406)
T ss_pred chHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhH
Confidence 44788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+...+++.|.+|+++|++..++......+|..++|.+++.+. ..+||+.|++.+++.++..+..++..|+++
T Consensus 115 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 115 LCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred hhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99888889999999999999999999998888899999999999888 789999999988887776665555556543
No 31
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=6.3e-22 Score=170.69 Aligned_cols=157 Identities=16% Similarity=0.252 Sum_probs=142.4
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++.++++++.+++.|++.|++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 96 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIF 96 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHH-HHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY-VYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+...+++.|++|+++|++++++.+.+..+|..++| .+++.+. ..+||+.|++.+++.++..++.+++.|+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 97 QGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred ccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence 9999999999999999999999999999999999999999 5666666 789999999988877776666665555543
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=99.87 E-value=2.3e-21 Score=168.30 Aligned_cols=181 Identities=20% Similarity=0.388 Sum_probs=155.8
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
.++.+..+.+.++...++....+. .+|.+.+++|.+..+.+++.+.+.++..++.++.|+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 77 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGF-----------------AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLAD 77 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----------------hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 344555555556655555544443 337889999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG 206 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 206 (276)
|+|||+.+..+.++..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 157 (398)
T TIGR00895 78 RIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVG 157 (398)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 207 YVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 207 ~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
+.+++++. ..+|++.|++.+++.++..++.+++.|+++
T Consensus 158 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 158 GFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred HHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCC
Confidence 99999988 889999999987666666666555566543
No 33
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=2e-20 Score=166.84 Aligned_cols=154 Identities=15% Similarity=0.074 Sum_probs=131.9
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.++++|++.|++
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc----------ccchhHHHHHhHHHHHHHHHHHH
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG----------HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----------~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
.+... ....+++|++|+++|++++++.+...++|..+++.+.+.+. ..|||+.|++.+++.++..++.+
T Consensus 138 ~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 138 LATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 87654 45668899999999999999998877777777766554432 14899999999998877776666
Q ss_pred hhccc
Q 023849 238 VMKPL 242 (276)
Q Consensus 238 ~~~~~ 242 (276)
++.++
T Consensus 217 ~~~~~ 221 (476)
T PLN00028 217 TLGQD 221 (476)
T ss_pred HHcCc
Confidence 55443
No 34
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.87 E-value=8.7e-21 Score=170.06 Aligned_cols=166 Identities=18% Similarity=0.299 Sum_probs=150.2
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhh
Q 023849 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLA 125 (276)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 125 (276)
.+++.+..+++.+++..++...++. .+|.+.+++|++..+.+++.+.+.+++.+++++.|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 79 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITL-----------------VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMG 79 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677777788887777776664 34789999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH
Q 023849 126 RSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 126 d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
||+|||+++.++.++.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+
T Consensus 80 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (496)
T PRK03893 80 DRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV 159 (496)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc-ccchhHHHHHhHHH
Q 023849 206 GYVYGGWVG-HYNWRYAFWGEAIL 228 (276)
Q Consensus 206 g~~~~~~l~-~~~w~~~~~~~~~~ 228 (276)
+|.+.+.+. ..+||+.|++..+.
T Consensus 160 ~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 160 AAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999988 88999999875443
No 35
>TIGR00898 2A0119 cation transport protein.
Probab=99.87 E-value=2.7e-21 Score=173.81 Aligned_cols=157 Identities=19% Similarity=0.279 Sum_probs=142.6
Q ss_pred CCccccccccCCC---chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 023849 87 TPGTGIQGDFDLN---NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRML 163 (276)
Q Consensus 87 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 163 (276)
+..+.+.+|+|++ ..+.+++.+++.++.++++++.|+++||+|||++++++.++.+++.++++++++++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4568999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.. ||+.|++.+++.++..+.. ++.||+
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~--wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD--WRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 9999999999999999999999999999999999999999999988766644 9999999998876665554 556777
Q ss_pred cCC
Q 023849 244 LKG 246 (276)
Q Consensus 244 ~~~ 246 (276)
+++
T Consensus 267 p~~ 269 (505)
T TIGR00898 267 PRW 269 (505)
T ss_pred hHH
Confidence 654
No 36
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.86 E-value=2e-20 Score=163.06 Aligned_cols=157 Identities=13% Similarity=0.151 Sum_probs=142.1
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++.++.++.+++.+++.++++++.+++.|++.|++
T Consensus 30 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 109 (394)
T PRK11652 30 AIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLG 109 (394)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+....++.|.++.++++++.++.+.+..+|..++|.+++.+. ..+||+.|++.+++.++..+...++.||++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 110 TGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 98888888889999999999999999999999999999999999988 789999999988877666555555556543
No 37
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.1e-21 Score=170.96 Aligned_cols=186 Identities=20% Similarity=0.303 Sum_probs=165.5
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHH
Q 023849 44 WFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFAS 123 (276)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~ 123 (276)
++....++..++..++..+.+...++...+ -.+.+|.+....+.+.+.+++.++++++.++++.
T Consensus 40 ~K~dl~i~~~~~~~y~~~~~d~~si~~a~l----------------~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~ 103 (495)
T KOG2533|consen 40 RKLDLFILPFLCYLYFHAYLDKSSIVNASL----------------SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGL 103 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhcchhHHH----------------cCCccccchhhhhhhhHHHHHHHHHHHHHhhHHH
Confidence 334445567777788888888888876543 3567888999999999999999999999999999
Q ss_pred hhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhh
Q 023849 124 LARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (276)
Q Consensus 124 l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 203 (276)
+.||++..+.+....++..+..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|++.++++....++|+
T Consensus 104 L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~ 183 (495)
T KOG2533|consen 104 LGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGN 183 (495)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhh
Confidence 99999988888888888888887777899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhh------c-ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 204 AIGYVYGGWV------G-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 204 ~~g~~~~~~l------~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
++|.+++..+ . ..||||.|++.|+++++..++++++.|+.|.
T Consensus 184 i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 184 IFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 9999998885 2 6799999999999999999999998888776
No 38
>PRK10504 putative transporter; Provisional
Probab=99.86 E-value=1.8e-20 Score=167.09 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC
Q 023849 50 LLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN 129 (276)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g 129 (276)
.+..++++.+...++.+.+.. .+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 73 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNT-----------------ALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVG 73 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH-----------------HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445555666666666655543 347899999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHH
Q 023849 130 PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVY 209 (276)
Q Consensus 130 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 209 (276)
||++++.+.++.+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+
T Consensus 74 ~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 153 (471)
T PRK10504 74 VRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL 153 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 210 GGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 210 ~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
++.+. ..+||+.|++...+..+..+......|+.
T Consensus 154 ~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 154 GGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99998 88999999998877666666555555543
No 39
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.86 E-value=1.4e-20 Score=162.91 Aligned_cols=159 Identities=20% Similarity=0.335 Sum_probs=146.2
Q ss_pred CCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 023849 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (276)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 164 (276)
..|.+|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++.++++++.+++.|++.
T Consensus 10 ~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 89 (377)
T PRK11102 10 YLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLH 89 (377)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+. ..+||+.|++.+++.++..+...+..|++
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPET 169 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999999999988 78999999998888777666666555654
No 40
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=4.9e-20 Score=160.45 Aligned_cols=157 Identities=15% Similarity=0.182 Sum_probs=143.8
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++.++++++.+++.|++.|++
T Consensus 25 ~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 25 GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIG 104 (392)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+....++.|.+|+++|+++.++.+....+|..++|.+++.+. ..+|++.|++.+++.++..++.++..||++
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999998887 789999999998887777766666555543
No 41
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.85 E-value=1.8e-20 Score=160.86 Aligned_cols=150 Identities=17% Similarity=0.121 Sum_probs=137.1
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-----SFWMIAICRMLV 164 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~r~l~ 164 (276)
|.+..+++.+..+.+++.+.+.++.++++++.|+++||+|||+++.++.++..++.++..+++ +++.++++|++.
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 677788999999999999999999999999999999999999999999999988888888887 999999999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
|++.+...+...+++.|++|+++|++++++.+....+|.+++|.+++.+. ..+||+.|++.++..++..+..+.+
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998 8899999999877665555444444
No 42
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=3.9e-20 Score=159.35 Aligned_cols=156 Identities=19% Similarity=0.196 Sum_probs=130.1
Q ss_pred Ccc-ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHH
Q 023849 88 PGT-GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVG 165 (276)
Q Consensus 88 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G 165 (276)
.+| .+++++|++..+.+++.+.+.+++++++++.|+++||+|||+.+.++.++.+++.+++++++ +++.+++.|++.|
T Consensus 23 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 102 (366)
T TIGR00886 23 LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG 102 (366)
T ss_pred hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 346 48899999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c----------cchhHHH-HHhHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H----------YNWRYAF-WGEAILMFPFA 233 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~----------~~w~~~~-~~~~~~~~~~~ 233 (276)
++.+. .+....++.|++|+++|++++++.....++|..+++.+++.+. . .+||+.| +..+++..+..
T Consensus 103 ~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 103 IAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPA 181 (366)
T ss_pred Hhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHH
Confidence 98654 5667889999999999999999999888888887777766554 1 3899999 44455554544
Q ss_pred HHHHhhccccc
Q 023849 234 VLGFVMKPLQL 244 (276)
Q Consensus 234 ~~~~~~~~~~~ 244 (276)
++.+++.++.+
T Consensus 182 ~~~~~~~~~~~ 192 (366)
T TIGR00886 182 LLIFFVGADTP 192 (366)
T ss_pred HHHHHhcccCC
Confidence 44444444433
No 43
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.85 E-value=1.9e-20 Score=166.10 Aligned_cols=180 Identities=14% Similarity=0.094 Sum_probs=145.7
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc
Q 023849 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (276)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~ 127 (276)
|.++..+++.+...+.++..++. .+|++.++ |++..+.+++.+.+.+++.+++++.|+++||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr 89 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFAL-----------------AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR 89 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------------hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 34444455555666666555543 23688887 9999999999999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhh
Q 023849 128 VNPFRLIGVGLTVWTLAVVGCGFSF----SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (276)
Q Consensus 128 ~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 203 (276)
+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+.....+.+++|+++|++++++++.+..+|.
T Consensus 90 ~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 90 SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999888887753 788889999999999998888888889999999999999999999999987
Q ss_pred h-HHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 204 A-IGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 204 ~-~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
. ++|+++..+. ..+||+.|++.+++.++..++.+++.|++++
T Consensus 170 ~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 170 GLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 5 4665544444 5599999999988777766666666565443
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.85 E-value=5.8e-20 Score=162.98 Aligned_cols=152 Identities=16% Similarity=0.171 Sum_probs=135.3
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHhh
Q 023849 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAI-CRMLVGVG 167 (276)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~l~G~~ 167 (276)
+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|++.|++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~ 121 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLG 121 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 47889999999999999999999999999999999999999999999999999999999999999998875 56899999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
.+...+....++.++++ ++|++++++.+.+..+|..++|.+++.+. ..|||++|++.+++.++..+..+++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 122 LAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred chhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98776777788889986 89999999999999999999999999888 789999999999887766555555544
No 45
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=9.9e-20 Score=157.07 Aligned_cols=134 Identities=10% Similarity=0.014 Sum_probs=127.8
Q ss_pred cccccccCCCchh-HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQ-DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
|++.+++|++..+ .|.+.+.+..+++++.++.|+++||+|.|+++.++.+...+..++.++++++..+.+.|++.|++.
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaE 129 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTM 129 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWG 224 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~ 224 (276)
|... ....++..++|+++|+++.+++..+..+|.++++++++++..+|||+-+..
T Consensus 130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~L 184 (511)
T TIGR00806 130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTL 184 (511)
T ss_pred HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHH
Confidence 9999 999999999999999999999999999999999999999558899965543
No 46
>PRK09952 shikimate transporter; Provisional
Probab=99.85 E-value=3.7e-20 Score=163.54 Aligned_cols=168 Identities=14% Similarity=0.151 Sum_probs=136.2
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCcccccccc--CCCchhHHHHH-----HHHHHHHHHHH
Q 023849 46 TPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDF--DLNNFQDGVLS-----SAFMVGLLVAS 118 (276)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~i~~ 118 (276)
++++.+...++.++..++|...++.... +.+.+++ +.++. .+++. ++..++..+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~ 81 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAA----------------LVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGG 81 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHH
Confidence 3455677777888889999888765321 1344444 56655 45543 34455677899
Q ss_pred hHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhH
Q 023849 119 PIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTA 190 (276)
Q Consensus 119 ~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 190 (276)
++.|+++||+|||+++.++.++++++.+++++++++. .++++|+++|++.|..++....++.|++|+++|++
T Consensus 82 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~ 161 (438)
T PRK09952 82 VVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAF 161 (438)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcH
Confidence 9999999999999999999999999999999999987 58889999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhhc---------ccchhHHHHHhHHHHH
Q 023849 191 WLGVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMF 230 (276)
Q Consensus 191 ~~~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~~~~~~~~~~ 230 (276)
..+..+.+..+|.+++..+...+. .+|||++|++.+++.+
T Consensus 162 ~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 162 YSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 999999999999988877665543 3799999998877643
No 47
>PRK11043 putative transporter; Provisional
Probab=99.85 E-value=1.2e-19 Score=158.50 Aligned_cols=154 Identities=18% Similarity=0.277 Sum_probs=139.7
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVG 107 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
.+...+...+++.|++|++++++..+.......+|..++|.+++++. ..+||+.|++.+++.++..+..+++.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 108 VCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888889999999999999999999889999999999999998 789999999988887766655554443
No 48
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=1.6e-19 Score=157.81 Aligned_cols=177 Identities=15% Similarity=0.039 Sum_probs=143.3
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCcccccc-ccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
+|.+.+..+.+...+.....++... +.+.+ ++|++.+|.+++.+++.+++.++.++.|++.|
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~-----------------~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~D 95 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVT-----------------VNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVP 95 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666666666666432 46655 89999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 201 (276)
|+|.|+++.++.++.++..++.+++ ++++.+++.|++.|++ +..++.....+++++|+++||+++|+.....++
T Consensus 96 r~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~ 174 (462)
T PRK15034 96 IFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL 174 (462)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh
Confidence 9999999999999999999999887 8999999999999998 778899999999999999999999999777777
Q ss_pred hhhHHHHHHHhhc-------------------ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 202 GYAIGYVYGGWVG-------------------HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 202 g~~~g~~~~~~l~-------------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
|..+++++...+. ..+||.++++..++.++..++.+++.++
T Consensus 175 G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~ 234 (462)
T PRK15034 175 GVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMND 234 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7765544443211 2248888888888777776666666544
No 49
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.6e-19 Score=158.62 Aligned_cols=153 Identities=16% Similarity=0.300 Sum_probs=141.2
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~ 170 (276)
..+++++..+.+++.+.+..|+++++++.|+++||+|.|+++.++.++.++..++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999888776 456779999999999999
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-cchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
.+++...+.++|.|+++|++..++...+..+|.+++-+++|++. . .||++.|++.++++++..++++++..++|.
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999998 5 899999999999999988888777544443
No 50
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.84 E-value=3.4e-20 Score=166.83 Aligned_cols=150 Identities=17% Similarity=0.310 Sum_probs=136.7
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHh
Q 023849 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFID 180 (276)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 180 (276)
.+.+++.+.+.++..+++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|++.|+|.|......+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcc--cchhHHHHHhHHHHHHHHHHHHhhcccccCCCCchh
Q 023849 181 DNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGH--YNWRYAFWGEAILMFPFAVLGFVMKPLQLKGFAPAE 251 (276)
Q Consensus 181 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (276)
|..|++.||...+..+....+|..++..++....+ ++||..+.+..+.+++..+. +++.||+|++..++.
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKG 240 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcC
Confidence 99999999999999999999999999666666654 48999999999998888777 778899888765533
No 51
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.84 E-value=8.9e-20 Score=159.14 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=125.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh--------hhHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--------FSFWMIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~r~ 162 (276)
++.+++|.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++.++ .+++.+++.|+
T Consensus 41 ~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (399)
T PRK05122 41 YVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRL 120 (399)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999998888776655443 25678899999
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHH
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMF 230 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~ 230 (276)
++|++.+...+....++.|++|+++|++++++.+....+|.++|+.+++.+. ..||++.+++.+++.+
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 121 LLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988 8899998887666543
No 52
>PRK10054 putative transporter; Provisional
Probab=99.84 E-value=2.3e-19 Score=156.39 Aligned_cols=153 Identities=16% Similarity=0.159 Sum_probs=137.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
+++++++|++..++|++.+.+.++..+++++.|+++||+|||++++++.++.+++.++..++++++.++++|++.|.+.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
...+....+..|..|+++|++++++.+...++|.+++|.+++++...+|+.+|++.++..++..++..++.|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888889999999999999999999999999999999999998877789999999888776665555554443
No 53
>PRK15075 citrate-proton symporter; Provisional
Probab=99.84 E-value=8e-20 Score=161.26 Aligned_cols=164 Identities=13% Similarity=0.124 Sum_probs=137.4
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHH-HHHHH-----HHHHHHHhH
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVL-SSAFM-----VGLLVASPI 120 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~i~~~~ 120 (276)
+++....+++..++.++|+..++.. .|.+.++++.++.+.+.+ .+... ++..+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~ 75 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFY-----------------ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIV 75 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4456777888999999999998864 479999999887776544 33222 223478899
Q ss_pred HHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHH
Q 023849 121 FASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWL 192 (276)
Q Consensus 121 ~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 192 (276)
.|+++||+|||+.++.+.++.+++.++++++++++ .++++|+++|++.+...+....++.|++|+++|++++
T Consensus 76 ~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 155 (434)
T PRK15075 76 LGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT 155 (434)
T ss_pred HHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence 99999999999999999999999999999999877 4688999999999999998899999999999999999
Q ss_pred HHHHHHhhhhhhHHHHHHHhhc---------ccchhHHHHHhHH
Q 023849 193 GVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAI 227 (276)
Q Consensus 193 ~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~~~~~~~ 227 (276)
++...+.++|..+++.+++.+. .+|||++|++..+
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9999988888888887777652 5799999997544
No 54
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.83 E-value=1.5e-19 Score=159.72 Aligned_cols=179 Identities=15% Similarity=0.082 Sum_probs=147.0
Q ss_pred hhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc
Q 023849 48 GRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS 127 (276)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~ 127 (276)
++.+..+.+.+...+.++..+.. .+|.+++ +|++..+.+++.+++.++..+++++.|+++||
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 87 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFAL-----------------AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR 87 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHh-----------------hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc
Confidence 34445555556666665554443 2256665 59999999999999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhh
Q 023849 128 VNPFRLIGVGLTVWTLAVVGCGFS----FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (276)
Q Consensus 128 ~grr~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 203 (276)
+|||+.+.++.++.+++.+++++. .+++.+.+.|++.|++.+..++.....+.|++|+++|++++++++....+|.
T Consensus 88 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 88 SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHh
Confidence 999999999999999988877664 4677888999999999999888889999999999999999999999999999
Q ss_pred hHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 204 AIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 204 ~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+++.+.+... ..+||+.|++.+++.++..+..+++.||++
T Consensus 168 ~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 168 GIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99887766544 579999999999888777666666656543
No 55
>PRK12382 putative transporter; Provisional
Probab=99.83 E-value=3.5e-19 Score=155.07 Aligned_cols=138 Identities=16% Similarity=0.180 Sum_probs=121.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHH---h-----hhhhHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---G-----FSFSFWMIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~r~ 162 (276)
++.+++|+|..+.|++.+.+.+++.++++++|+++||+|||+++..+.+...++.+.. . ..++++.++++|+
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999888776654322 2 1358899999999
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHH
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~ 228 (276)
++|++.+...+...+++.|++|+++|++++++.+.+..+|..++|++++.+. ..||++.+.+..++
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 9999999988988999999999999999999999999999999999999988 78999877765444
No 56
>PRK10133 L-fucose transporter; Provisional
Probab=99.83 E-value=4.4e-19 Score=156.52 Aligned_cols=126 Identities=21% Similarity=0.265 Sum_probs=115.8
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFSFSFWMIAICRMLV 164 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~r~l~ 164 (276)
.+|.+++++|+++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.++++++.+++ .++++++.++++|+++
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~ 127 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFII 127 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3479999999999999999999999999999999999999999999999999999999875 4678999999999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
|+|.+...+....++.++.|+++|...+++.+....+|..+++.+++.+
T Consensus 128 G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987777777789999999999999999887643
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.83 E-value=3.8e-19 Score=155.26 Aligned_cols=153 Identities=14% Similarity=0.205 Sum_probs=139.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
+++++++|++..+.|++.+.+.++..+.+++.|+++||+|||+++.++.++.+++.+++.+.++++.+++.|++.|++.+
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
...+...+++.+++|+++|++++++.+....+|..+||.+++++...+||+.|++.+++.++..++..+..|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8889999999999999999999999999999999999999999887799999999888776665554444454
No 58
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.83 E-value=3.8e-20 Score=169.44 Aligned_cols=152 Identities=19% Similarity=0.361 Sum_probs=135.2
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---------------
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--------------- 152 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--------------- 152 (276)
+++.++++|+++..+.|++.+.+.++++++.++.|++.||+|||+.+.++.++++++.+++++.+
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 45799999999999999999999999999999999999999999999999999999999888764
Q ss_pred ------------------------------------hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHH
Q 023849 153 ------------------------------------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFY 196 (276)
Q Consensus 153 ------------------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 196 (276)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++++
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 24567889999999999999999999999999999999999999
Q ss_pred HHhhhhhhHHHHHHHhhc-cc----------------------chhHHHHHhHHHHHHHHHHHHhh
Q 023849 197 MCLPSGYAIGYVYGGWVG-HY----------------------NWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 197 ~~~~~g~~~g~~~~~~l~-~~----------------------~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
....+|.++|+++++++. .+ +|+..|++.+++.++..+.++++
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999876 22 27778888888777766554443
No 59
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.82 E-value=1.2e-18 Score=152.31 Aligned_cols=155 Identities=20% Similarity=0.235 Sum_probs=135.8
Q ss_pred CccccccccCCCchh-----HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 023849 88 PGTGIQGDFDLNNFQ-----DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRM 162 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 162 (276)
.+|.+.+++|++..+ .+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|+
T Consensus 36 ~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (408)
T PRK09874 36 FLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRA 115 (408)
T ss_pred hHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 347788889888554 488899999999999999999999999999999999999999998889999999999999
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
+.|++.+ ..+....++.+.+|+++|++++++......+|..++|.+++.+. ..+||+.|++.+++.++..+..+++.|
T Consensus 116 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 116 LLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999855 55777888999999999999999999999999999999999988 789999999998887776666665555
Q ss_pred cc
Q 023849 242 LQ 243 (276)
Q Consensus 242 ~~ 243 (276)
++
T Consensus 195 ~~ 196 (408)
T PRK09874 195 EN 196 (408)
T ss_pred cC
Confidence 54
No 60
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=1.3e-19 Score=163.54 Aligned_cols=157 Identities=18% Similarity=0.246 Sum_probs=139.5
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhh
Q 023849 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
+.+..+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 55667888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhcccccCCCCchhhh
Q 023849 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGFAPAESK 253 (276)
Q Consensus 174 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (276)
....++.|++++++|+.+..+ ......++.+++..++++.. +|||.+++..++.++.+++ +++.||++++...+.+.
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~ 267 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRI 267 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCch
Confidence 999999999999999999999 77777777888887777765 8999999999988766655 55667888876544443
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=9.5e-19 Score=153.12 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=134.6
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF---SFSFWMIAICRMLV 164 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~ 164 (276)
.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.+++.. .++++.+++.|++.
T Consensus 25 l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~ 104 (410)
T TIGR00885 25 MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFIL 104 (410)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999999999887644 35899999999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c--------------------------cc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H--------------------------YN 217 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~--------------------------~~ 217 (276)
|+|.|...+....++.+..|+++|++.+++.+...++|..++|.+++.+. . .+
T Consensus 105 G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (410)
T TIGR00885 105 TAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLAS 184 (410)
T ss_pred HhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988774 1 35
Q ss_pred hhHHHHHhHHHHHHHHHHHH
Q 023849 218 WRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 218 w~~~~~~~~~~~~~~~~~~~ 237 (276)
||++|++.+++.++..++..
T Consensus 185 w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 185 VQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999887766554443
No 62
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.81 E-value=1.2e-18 Score=150.49 Aligned_cols=155 Identities=11% Similarity=0.128 Sum_probs=131.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIG-VGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
++++++|.+..+.|++.+.+.+...+.+++.|+++||+|||+.++ .+..+.+++.++++++++++.+++.|++.|.+.+
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 102 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAS 102 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhh
Confidence 467899999999999999999999999999999999999988765 4566666777888889999999999999998888
Q ss_pred hhhhcHHHHHhhcCcchhhhHH--HHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 170 SFISLAAPFIDDNAPVAKKTAW--LGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
...+...+++.|+.|+++|++. .+......++|.++||.+++.+. ..+||+.|++.+++.++..++.+++.||.++
T Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 181 (375)
T TIGR00899 103 TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPR 181 (375)
T ss_pred hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 8888888888998887777654 57888888999999999999998 7899999999988877776666665666543
No 63
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.81 E-value=9.5e-19 Score=156.06 Aligned_cols=149 Identities=16% Similarity=0.144 Sum_probs=129.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhhhHHH-HHHHHHHHHhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFSFWM-IAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~l~G~~ 167 (276)
.++.+++|++..+.+++.+.+.....+..+++|+++|| +|||+++.++.++++++.++++++.+... ++++|+++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 47788899999999999999998888889999999999 99999999999999999999998876444 55899999999
Q ss_pred hhhhhhcHHHHHhhcCcch--hhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 168 EASFISLAAPFIDDNAPVA--KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.|...+...+++.|.+|++ +|++++++++.+.++|.++||.+++++. +.|||+.|++.++ .++..++.+.+
T Consensus 119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~ 192 (489)
T PRK10207 119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFA 192 (489)
T ss_pred cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHH
Confidence 9999999999999999877 4578999999999999999999999999 8899999998655 33333333333
No 64
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.80 E-value=2.4e-18 Score=149.34 Aligned_cols=127 Identities=18% Similarity=0.252 Sum_probs=120.8
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
.+|.+.+++|.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 28 ~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (381)
T PRK03633 28 LVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIG 107 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.+...+.....+.+..++++|++++++++.+.++|..+||.+++.+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 108 CAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99998888888889999999999999999999999999999999987
No 65
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.80 E-value=1.5e-18 Score=151.18 Aligned_cols=151 Identities=17% Similarity=0.160 Sum_probs=129.0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
+.+.++++.+..+.+++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++.++.+. ++.|+++|++.+
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999888877776664 788999999999
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
...|...+++.|++|+++|++++++.+....+|.++||.+++++....|+..+++.+...++. ++..+..|+++
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999998545777777665544333 33334455543
No 66
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.80 E-value=1.2e-18 Score=155.52 Aligned_cols=153 Identities=18% Similarity=0.119 Sum_probs=131.9
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
+++.+..++|-+ ....|+.+.+.++..++.++.|+++|.||||+.++.+.++..+|.++++.++|...++++..+.|+|
T Consensus 66 ~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvg 144 (599)
T PF06609_consen 66 ILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVG 144 (599)
T ss_pred HHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHh
Confidence 457888999865 5788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh-ccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM-KPL 242 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~-~~~ 242 (276)
.|.... ....++|..|.|.|+...++......+...+++.++..+. +.+|||.|++.+++..+.+++.+++ .|+
T Consensus 145 aG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 145 AGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred hHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 777664 4566899999999998888777776666667888887777 7899999999999887776665544 443
No 67
>PTZ00207 hypothetical protein; Provisional
Probab=99.80 E-value=4.5e-18 Score=152.69 Aligned_cols=149 Identities=14% Similarity=0.128 Sum_probs=129.0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh------hhHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------FSFWMIAICRML 163 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~r~l 163 (276)
+.+++++|++..+.+++.+.. ....+++++.|++.||+|+|+++.++.++..++.++++++ .+++.+++.|++
T Consensus 51 ~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l 129 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGL 129 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHH
Confidence 688999999999999988763 4455678889999999999999999999999999999987 689999999999
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH-HHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI-GYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
.|+|.+...+.+...+.+++| ++||++.|+...+..+|.++ +++..+++. .+|++.|++.+++.++..++.+++.+
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999999999997 78999999999999999986 555555554 46888899988888887777776643
No 68
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.79 E-value=3.7e-18 Score=145.48 Aligned_cols=150 Identities=27% Similarity=0.445 Sum_probs=139.5
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+.+.++.++..++.+++.+.++++.+++.|++.|++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 101 (352)
T cd06174 22 LPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGG 101 (352)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHccc
Confidence 46788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
+...+...+++.|++|+++|++.+++.+....+|..++|.+++.+. ..+||+.+++.+++.++..+...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 102 GALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLF 172 (352)
T ss_pred ccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 778999999988877666555443
No 69
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.78 E-value=7.5e-18 Score=150.07 Aligned_cols=143 Identities=14% Similarity=0.109 Sum_probs=130.4
Q ss_pred ccccc--cCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 91 GIQGD--FDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 91 ~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
++.++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|+|
T Consensus 36 yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g 115 (475)
T TIGR00924 36 YLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVG 115 (475)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhc
Confidence 45555 89999999999999999999999999999999 8999999999999999999999998889999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchh---hhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHH
Q 023849 168 EASFISLAAPFIDDNAPVAK---KTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~ 233 (276)
.|...+...+++++++|+++ |++++++++.+.++|.++||.+++++. +.||++.|++.++..++..
T Consensus 116 ~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 116 SGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL 185 (475)
T ss_pred cccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 99999999999999998754 888999999999999999999999998 7899999999876554443
No 70
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.78 E-value=9.6e-18 Score=144.14 Aligned_cols=142 Identities=20% Similarity=0.217 Sum_probs=127.6
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
|.+|.+.+++|++.++.+++.+.+.++..+++++.|++.||+|||+++.++.++.+++.+.+ .+++.+.+++.|++.|+
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 99 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGV 99 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999998888888777 77899999999999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc--chhHHHHHhHHHHH
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY--NWRYAFWGEAILMF 230 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~--~w~~~~~~~~~~~~ 230 (276)
+.+...+....++.|++| ++|++++++++....+|..+++.+++.+. .. +||+.|.+.+++.+
T Consensus 100 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 100 GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 999988888888999886 68999999999999999999999988887 33 49999887766543
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=3.2e-18 Score=144.07 Aligned_cols=177 Identities=16% Similarity=0.185 Sum_probs=149.1
Q ss_pred hHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc
Q 023849 49 RLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV 128 (276)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~ 128 (276)
+.+.+..+....+++.-+.++... +.+.+++|+|+.|.+++.++..+...+..++.|.+.||+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~-----------------~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf 76 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLG-----------------VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF 76 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc
Confidence 444444444445555444555433 578899999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH
Q 023849 129 NPFRLIGVGLTVWTLAVVGCGFSFS---FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 129 grr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
|.|++..++.++..+-++..+++.+ ++++++.+.+.|++ |..++....+++.++|++++|.++|++. ..++|..+
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av 154 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV 154 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHH
Confidence 9999999999999999998888864 45999999999998 7777888999999999999999999999 89999999
Q ss_pred HHHHHHhhc-ccc---hhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 206 GYVYGGWVG-HYN---WRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 206 g~~~~~~l~-~~~---w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
...++..+. ..+ |+.+..+..+..++..+..++...+.+
T Consensus 155 ~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 155 AQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 888888887 667 999999988888887777777754443
No 72
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.78 E-value=1.7e-17 Score=145.08 Aligned_cols=152 Identities=13% Similarity=0.244 Sum_probs=125.0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh---h-hhhHHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---F-SFSFWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~r~l~G 165 (276)
+.+.+++|.+..+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++. + ..+++.+++.|++.|
T Consensus 37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G 116 (402)
T TIGR00897 37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRG 116 (402)
T ss_pred HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH
Confidence 455688999999999999999999999999999999999999999999999988776542 3 257888899999999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhh-hHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY-AIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
++.+...+.....+.+++|+++|++++|+.+...++|. +++|.+++++. ..||+..++.......+..++.+++.+
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 99888888888889999999999999999999999997 57999988887 778776666554443333333333333
No 73
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=2.5e-18 Score=143.26 Aligned_cols=149 Identities=22% Similarity=0.251 Sum_probs=139.3
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhh
Q 023849 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
.+.+-+.+++|++.+...+.+.+.+++.|.+.||+|+|..+++|+.++.++.+++++..+++.+++.|.++|+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34556778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhhcCcch-hhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 174 LAAPFIDDNAPVA-KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 174 ~~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
...+++++.+|.+ +|++++|+.-.+.++|..+||++||.+. ..|.+.+|++.+++.++-..+.++..+.
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999999999976 5899999999999999999999999999 8899999999999998888877777544
No 74
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=2.2e-17 Score=146.84 Aligned_cols=154 Identities=18% Similarity=0.202 Sum_probs=141.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAIC-RMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~~ 168 (276)
+.++++|+.+..+++|+.++......+.+++.+.+.||+|.|.+.++|.++..++.++.+++++++++++. -++.|+|.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999988876 58899999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
|..+......+..+|+ ++|+.+.|+...+..+|.++-|.+..++. ..|||+.+++.+.+.+-+++.....+|...
T Consensus 150 ~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred hhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999997776 99999999999999999999888888888 999999999999998777777777777443
No 75
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.75 E-value=2.3e-17 Score=144.87 Aligned_cols=153 Identities=12% Similarity=-0.015 Sum_probs=131.4
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLV 164 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~ 164 (276)
|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|++.
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 6777888889999999999999999999999999999999999999988877776655432 46788899999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
|++.+...+...+++.++.|+++|+++.++.+....+|..+||.+++.+. ..+|++.|++.++..++..++.+ ..|+.
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 199 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPAL 199 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 99988888888999999999999999999999999999999999999988 77999999988776655544433 34443
No 76
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.4e-17 Score=145.44 Aligned_cols=145 Identities=20% Similarity=0.201 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHhhhhhhhhcHHHHHh
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS---FSFWMIAICRMLVGVGEASFISLAAPFID 180 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 180 (276)
+.+.+++.+|.++|+++.++++||+|||..+.+..++..++.+++.++ +++.+++++|++.|+..|......+.++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~ 142 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 667899999999999999999999999999999988887777665554 68899999999999999999999999999
Q ss_pred hcCcchhhhHHHHHHHHHhhhhhhHHHHHHH--hhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccCCCCc
Q 023849 181 DNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG--WVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGFAP 249 (276)
Q Consensus 181 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~--~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (276)
|..|++.||....+.+.+..+|..++..++. .+. ...|.+.+.+..+++++.+ +.+.+.||+|++.-.
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~ 213 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLI 213 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHH
Confidence 9999999999999999999999999976653 233 6679999999888765544 445567999987543
No 77
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=1e-17 Score=138.87 Aligned_cols=118 Identities=19% Similarity=0.303 Sum_probs=108.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHH
Q 023849 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (276)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 176 (276)
+.+..-.|++.+.+.++.+++++.+|.++||+|||+++.+|++..++...+.+++.|+..+++.|++.|+.-|-. .+..
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~r 142 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIR 142 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHH
Confidence 345556799999999999999999999999999999999999999999999999999977777899999986655 5578
Q ss_pred HHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcc
Q 023849 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGH 215 (276)
Q Consensus 177 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 215 (276)
++++|.+++++|+.+++.+++..++|.++||.+|+++..
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 999999999999999999999999999999999999973
No 78
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.74 E-value=2e-16 Score=137.91 Aligned_cols=154 Identities=8% Similarity=0.108 Sum_probs=119.1
Q ss_pred cccccccCCCchhHHHHHHHHHH-HHHHHHhHHHHhhhccCChhhH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLI-GVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
+++.+++|++.+++|++.+...+ +..++.++.++ .||+|||+.+ ..+.++.+++..+.+++++++.+++.+.+.|..
T Consensus 40 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 40 IFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 35788999999999999876655 55556655566 9999999875 455666667777788889998887666555555
Q ss_pred hhhhhhcHHHHHhhcCcchhh--hHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 168 EASFISLAAPFIDDNAPVAKK--TAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+...+....++.++.+++.| +...++.+.+.++|.++||++++.+. +.|||+.|++.++..++..+..+++.|+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 567778888888888776655 34557888899999999999999998 889999999998887777666666666653
No 79
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.74 E-value=3.6e-17 Score=121.00 Aligned_cols=136 Identities=25% Similarity=0.354 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcch
Q 023849 107 SSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA 186 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 186 (276)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788899999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 187 KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 187 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
+|++..++.+....+|..++|.+.+.+. ..+|++.|++.+++.++..+..+++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999988 7899999999888877776666655543
No 80
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.74 E-value=1.9e-16 Score=141.92 Aligned_cols=144 Identities=15% Similarity=0.193 Sum_probs=123.5
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~ 167 (276)
.++.+++|++..+.+++.+.+........+++|+++|| +|||+++.++.++.+++.+++++++ +.+.+.++++++|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 46778999999999888888776666777899999999 5999999999999999998888874 566777889999999
Q ss_pred hhhhhhcHHHHHhhcCcchh--hhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHH
Q 023849 168 EASFISLAAPFIDDNAPVAK--KTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~ 233 (276)
.|...+...+++.|++|+++ |..++++++.+.++|.++||.+++++. +.|||+.|++.++..++..
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999998643 556889999999999999999999998 7899999999876544443
No 81
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.71 E-value=2.2e-16 Score=135.76 Aligned_cols=155 Identities=10% Similarity=0.037 Sum_probs=126.8
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc-----CChhh-HHHHHHHHHHHHHHHhhh---hhHHHH
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFRL-IGVGLTVWTLAVVGCGFS---FSFWMI 157 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----grr~~-~~~~~~~~~~~~~~~~~~---~~~~~~ 157 (276)
+.+|.+.+|+|++.++.+++... .+...+ .+++|+++||+ |||+. ++.+.++.++.....++. .+++.+
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 34578899999999999999655 444554 99999999998 89887 466777777776666666 466667
Q ss_pred HHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc--------hhHHHHHhHHH
Q 023849 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN--------WRYAFWGEAIL 228 (276)
Q Consensus 158 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~--------w~~~~~~~~~~ 228 (276)
....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+. ..+ ||++|++.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~ 166 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALL 166 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHH
Confidence 777888888888888999999999999999999999999999999999999998887 666 99999999887
Q ss_pred HHHHHHHHHhhcccc
Q 023849 229 MFPFAVLGFVMKPLQ 243 (276)
Q Consensus 229 ~~~~~~~~~~~~~~~ 243 (276)
.++..+..++..||+
T Consensus 167 ~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 167 ILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHhccCC
Confidence 766555545445554
No 82
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.71 E-value=7.4e-20 Score=162.17 Aligned_cols=154 Identities=19% Similarity=0.319 Sum_probs=135.6
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHhhhhhhhhcHH
Q 023849 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMIAICRMLVGVGEASFISLAA 176 (276)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~ 176 (276)
..+.+++.+...+|..+|++++|+++||+|||+.+.++.++..++.++.++++ +++.+.++|++.|++.|...+...
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34678999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc----ccchhHHHHHhHHHHHHHHHHHHhhcccccCCCCchhh
Q 023849 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG----HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGFAPAES 252 (276)
Q Consensus 177 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (276)
.++.|..|+++|++..++.+.+..+|..++..++..+. ..+||+.+++.+++.++..+ ..++.||+|++...+++
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGR 203 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccceeccccc
Confidence 99999999999999999999999999998887765554 24699999999888765544 34567999988765554
Q ss_pred hc
Q 023849 253 KK 254 (276)
Q Consensus 253 ~~ 254 (276)
.+
T Consensus 204 ~~ 205 (451)
T PF00083_consen 204 DE 205 (451)
T ss_pred cc
Confidence 43
No 83
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.71 E-value=4e-16 Score=137.94 Aligned_cols=141 Identities=16% Similarity=0.165 Sum_probs=118.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc-CChhhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-NPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~ 168 (276)
++.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++.+++.++++..+ +...+.++..+.++|.
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 56677899999999999999999999999999999999 999999999999999887776543 2233444555555667
Q ss_pred hhhhhcHHHHHhhcCcch--hhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVA--KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~ 231 (276)
|...+...++++|.+|++ +|.+++++.+...++|..++|.+.+++. ..||++.|.+.++..++
T Consensus 115 G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l 180 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIA 180 (493)
T ss_pred ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHH
Confidence 777788889999999975 7999999999999999999999999998 88999999987664433
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.70 E-value=1e-15 Score=134.50 Aligned_cols=145 Identities=15% Similarity=0.232 Sum_probs=125.7
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHhhhhhhhhcH
Q 023849 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF----SFWMIAICRMLVGVGEASFISLA 175 (276)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~r~l~G~~~~~~~~~~ 175 (276)
.+..+...++..++.+++.++.|+++||+|+|+++.++.++.+++..+..... +++.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999988876666532 34667788999999999888998
Q ss_pred HHHHhhcCcchhhhHHHHHHH-HHhhhhhhHHHHHHHhhc-c------cchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 176 APFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-H------YNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 176 ~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
..++.|.+|+++|++++|+.+ ....+|.++||+++|++. . .||+..|++.+++.++..++.+++.+++.
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999997 678899999999999987 3 57999999998888888877777776653
No 85
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.70 E-value=1.6e-16 Score=137.75 Aligned_cols=135 Identities=14% Similarity=0.210 Sum_probs=112.0
Q ss_pred CCchhHHHHHHH-----HHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHH
Q 023849 98 LNNFQDGVLSSA-----FMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW--------MIAICRMLV 164 (276)
Q Consensus 98 ~~~~~~~~~~~~-----~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~ 164 (276)
.++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.++++++++++ .++++|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 444555554433 2233346899999999999999999999999999999999998875 478899999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc---------ccchhHHHHHhHHHHHHH
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG---------HYNWRYAFWGEAILMFPF 232 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---------~~~w~~~~~~~~~~~~~~ 232 (276)
|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++..+. .++||+.|++.+++.++.
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 183 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIG 183 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988776542 468999998877665443
No 86
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69 E-value=2.2e-15 Score=135.01 Aligned_cols=157 Identities=11% Similarity=0.065 Sum_probs=118.7
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG---CGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G~~ 167 (276)
++++++|.+..+.++..+...++..++.++.|+++||+|||+++.++.++..+..+. ...+++...+++++++.|++
T Consensus 276 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 276 YLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI 355 (490)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 445678888888888888889999999999999999999999988887654433322 22334677788899999988
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-cchhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
.+........++.|.+|++.|++++++.+....+++.++|.+.+++. . .+|+.+++...+++++..+..+ +.||+++
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~ 434 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETAN 434 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccC
Confidence 87777777888899999999999999755555666778898888877 3 4577777766666655555444 4577766
Q ss_pred CCC
Q 023849 246 GFA 248 (276)
Q Consensus 246 ~~~ 248 (276)
+..
T Consensus 435 ~~~ 437 (490)
T PRK10642 435 RPL 437 (490)
T ss_pred CCC
Confidence 543
No 87
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.68 E-value=9.1e-16 Score=150.55 Aligned_cols=154 Identities=11% Similarity=0.028 Sum_probs=120.8
Q ss_pred ccccccCCCc--hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNN--FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG---CGFSFSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~l~G 165 (276)
.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.+++.++ +..+++++.++++|++.|
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 114 (1146)
T PRK08633 35 TLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLG 114 (1146)
T ss_pred HHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4445565543 44689999999999999999999999999999999988776555544 334578999999999999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c--------c-chhHHHHHhHHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H--------Y-NWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~--------~-~w~~~~~~~~~~~~~~~~~ 235 (276)
++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.+++++. . + +|.+.+.+..+...++.++
T Consensus 115 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1146)
T PRK08633 115 AQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLI 194 (1146)
T ss_pred HHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 4 2 3444444444433333333
Q ss_pred HHhhccccc
Q 023849 236 GFVMKPLQL 244 (276)
Q Consensus 236 ~~~~~~~~~ 244 (276)
..+..|+.+
T Consensus 195 ~~~~~~~~~ 203 (1146)
T PRK08633 195 FAYRLPKVP 203 (1146)
T ss_pred HHhcCcCCC
Confidence 333445543
No 88
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.68 E-value=1.1e-15 Score=132.70 Aligned_cols=137 Identities=11% Similarity=0.055 Sum_probs=113.9
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhH----HHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLI----GVGLTVWTLAVVGCGFSFSFWMIAICRML 163 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 163 (276)
.+|.+.+++|++..++|++.+++.+...++++++|+++||+||+... .++..+..+ ..+..+++++.+++.|++
T Consensus 26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l 103 (382)
T TIGR00902 26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGL 103 (382)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHH
Confidence 45688899999999999999999999999999999999999985433 222222222 244467899999999999
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHH
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~ 228 (276)
+|.+.+...+...+++.++ +++|++.+|......++|.+++|++++.+. ..|||+.|++.++.
T Consensus 104 ~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred HHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 9999888888888887664 478899999999999999999999999998 78999999887655
No 89
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.68 E-value=1.4e-15 Score=149.06 Aligned_cols=150 Identities=13% Similarity=0.053 Sum_probs=116.7
Q ss_pred cccccCCC-chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 92 IQGDFDLN-NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGV---GLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
+..+.+.+ ....++..+++.+.++++++++|+++||+|||+++.. +.++.++..+.....++++.++++|+++|++
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~ 121 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIH 121 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33444433 2446888899999999999999999999999997643 2222222223333448999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
.+...++..+++.+++|+++|++++|+.+++..+|.++||++++++. ..+|++.|+..++..++. ++..+..|+
T Consensus 122 ~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 196 (1140)
T PRK06814 122 SALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPK 196 (1140)
T ss_pred HHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCC
Confidence 99999999999999999999999999999999999999999999998 889999995544444333 333333343
No 90
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.67 E-value=2.2e-15 Score=134.83 Aligned_cols=152 Identities=14% Similarity=0.155 Sum_probs=125.6
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc-----CChhh-HHHHHHHHHHHHHHHhhh---hhHHHHHH
Q 023849 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFRL-IGVGLTVWTLAVVGCGFS---FSFWMIAI 159 (276)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----grr~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~ 159 (276)
+|.+.++.|.+..+++.+ +.....+ ++.+++|+++||+ |||+. +.++.++.+++..++++. ++++.+.+
T Consensus 35 l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~ 112 (491)
T PRK11010 35 LQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAA 112 (491)
T ss_pred HHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 367778889999999987 4444444 6899999999999 99885 667777777777777665 47888999
Q ss_pred HHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcc--cchhHHHHHhHHHHHHHHHHHH
Q 023849 160 CRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGH--YNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 160 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.. .|||..|++.+++.++..+..+
T Consensus 113 ~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 113 LAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888873 5999999999887766655444
Q ss_pred hhcccc
Q 023849 238 VMKPLQ 243 (276)
Q Consensus 238 ~~~~~~ 243 (276)
+ .||+
T Consensus 193 ~-~~e~ 197 (491)
T PRK11010 193 L-APEP 197 (491)
T ss_pred h-cCCC
Confidence 3 4554
No 91
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.67 E-value=8.9e-15 Score=127.55 Aligned_cols=148 Identities=14% Similarity=0.116 Sum_probs=123.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
++++++|.+..+.+++.+...++.+++.++.|+++||+|||+.+..+.....+......+.++.+.+++.+++.+++.+.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 56678899999999988888888888999999999999999988877766666555555667888888889988888887
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
..+....+..|.+| ++|+++.++++....+|..++|.+++.+. ..||+..|++.+++.++.++..++.
T Consensus 322 ~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 322 LGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 77777788899988 46999999999999999999999999998 7899999998887776665555544
No 92
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.67 E-value=1.8e-15 Score=131.94 Aligned_cols=151 Identities=12% Similarity=0.092 Sum_probs=117.2
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHH---hhh-----hhHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFS-----FSFWMIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~r~ 162 (276)
++.+++|.+..+.+++.+++.++..+++++.|+++||+|||+.+..+....++..... .+. ..+..+++.++
T Consensus 28 ~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (396)
T TIGR00882 28 WLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGL 107 (396)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5567899999999999999999999999999999999999999988776665443322 111 12334566788
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
+.|++.+...+....++.+.. ++++..++......++|.++||.+++.+...+|+++|++.+++.++..++.++..|+
T Consensus 108 ~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 108 YLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILMLLLMFAKPK 185 (396)
T ss_pred HHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888887887777776653 334566778888889999999999998877799999999988887776665555544
Q ss_pred c
Q 023849 243 Q 243 (276)
Q Consensus 243 ~ 243 (276)
.
T Consensus 186 ~ 186 (396)
T TIGR00882 186 A 186 (396)
T ss_pred C
Confidence 3
No 93
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=6.6e-15 Score=123.57 Aligned_cols=153 Identities=18% Similarity=0.168 Sum_probs=138.7
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FSFSFWMIAICRMLV 164 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~ 164 (276)
.+|.+++.|+++..+.+++...+..++.+.+++.|++.+|+|+|+.++.|+.++++++.+.. ...++..++++-++.
T Consensus 35 Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFil 114 (422)
T COG0738 35 LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFIL 114 (422)
T ss_pred hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999875 556899999999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-------------------cchhHHHHH
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-------------------YNWRYAFWG 224 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-------------------~~w~~~~~~ 224 (276)
|.|.+...+.+..++..+.+++...+.+++.+.++.+|.+++|++++.+. + ..|+++|..
T Consensus 115 a~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~ 194 (422)
T COG0738 115 ASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLI 194 (422)
T ss_pred HhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHH
Confidence 99999999999999999999999999999999999999999999998875 2 138899999
Q ss_pred hHHHHHHHHHHHHhhc
Q 023849 225 EAILMFPFAVLGFVMK 240 (276)
Q Consensus 225 ~~~~~~~~~~~~~~~~ 240 (276)
.+.+.+++.+.....+
T Consensus 195 ~~~~lvll~v~~~~~k 210 (422)
T COG0738 195 LAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 8887777666665554
No 94
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=3.1e-16 Score=129.72 Aligned_cols=155 Identities=15% Similarity=0.188 Sum_probs=138.0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
|.+.+.+|.+..+..++......+..+++..+|.++|++|||+.+.+..+...+..++.++++|+..+++.|.+.|+|.|
T Consensus 102 ~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~g 181 (528)
T KOG0253|consen 102 PALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVG 181 (528)
T ss_pred HHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCC
Confidence 67888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccCCC
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGF 247 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (276)
+ .|...++-.|..|..+|...+-+. ..+.+|.++...+...+. +.||||.+...+.+. ..+....++.||+++..
T Consensus 182 g-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl-~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 182 G-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPL-MFAARFLVWVYESPRFY 257 (528)
T ss_pred C-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHH-HHHHHHHhhcccCcchh
Confidence 9 788888889999999998887777 889999999998887777 899999988888554 34444556778888754
No 95
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.66 E-value=4.5e-15 Score=137.18 Aligned_cols=141 Identities=11% Similarity=0.004 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhc
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 182 (276)
..+...+..++.+++.++.|+++||+|||++++++.++.+++.++.++.++...+++++++.|++.++.++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677889999999999999999999999999999999999999988888888889999998888899999999999
Q ss_pred CcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
+|.+.|++++|+.+....+|.++||++++.+...+...+|++.+++.++..++.+++ ||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~L-PET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKL-PDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 999999999999999999999999999998874456677887777766655555544 6543
No 96
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.65 E-value=9.5e-15 Score=127.49 Aligned_cols=147 Identities=19% Similarity=0.206 Sum_probs=126.1
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhh
Q 023849 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
.+.|.+ ..++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++.+..++
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 244 AARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence 344553 456777888899999999999999999999999999888888888888888888888899999999998888
Q ss_pred cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 174 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
.....+.|.+|+++|+++.++++....+|..+++.+.+++. ..||++.|++.+++.++..+..+++.++
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88888889999999999999999999999999999988888 7899999999888877766666555443
No 97
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.65 E-value=6e-15 Score=128.98 Aligned_cols=153 Identities=15% Similarity=0.085 Sum_probs=126.6
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc-----CChh-hHHHHHHHHHHHHHHHhhh---hhHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFR-LIGVGLTVWTLAVVGCGFS---FSFWMIA 158 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----grr~-~~~~~~~~~~~~~~~~~~~---~~~~~~~ 158 (276)
.+|.+-++.|++.+++|++..+... .+..+++|+++||+ |||+ .+.++.++.+++..++++. .+++.++
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~ 98 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLA 98 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHH
Confidence 3467778889999999999776665 69999999999999 7775 6888888887777777776 3577788
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-cchhHHHHHhHHHHHHHHHHH
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLG 236 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~~~~~~~~~~~~~~~~ 236 (276)
+..++.+++.+...+...+++.|+.|+++|+++.++...+..+|.++++.+++.+. . .|||..|++.+++.++..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~- 177 (402)
T PRK11902 99 GLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT- 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-
Confidence 88888888888888999999999999999999999999999999999999888887 3 59999999988876655443
Q ss_pred Hhhcccc
Q 023849 237 FVMKPLQ 243 (276)
Q Consensus 237 ~~~~~~~ 243 (276)
.+..||+
T Consensus 178 ~~~~~e~ 184 (402)
T PRK11902 178 TLWAPEP 184 (402)
T ss_pred HHhcCCC
Confidence 3344544
No 98
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.65 E-value=1.4e-15 Score=133.80 Aligned_cols=146 Identities=12% Similarity=0.069 Sum_probs=127.3
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcH
Q 023849 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLA 175 (276)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 175 (276)
.+.+..+.+++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.+++++.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666788999999999999999999999999999999999999999988888889999999999999999988888888
Q ss_pred HHHHhhcCcchhhhHHHHH-HHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 176 APFIDDNAPVAKKTAWLGV-FYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 176 ~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
..++.+.+|++.|++..+. ++....+|.+++|.+.|++. ..||+.+|++.+++.++..++.++..+
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999887665 67778899999999999998 789999999988877666655555433
No 99
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.65 E-value=2.4e-16 Score=133.75 Aligned_cols=186 Identities=15% Similarity=0.157 Sum_probs=142.7
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCcccccccc--------CCCchhHHHHHHHHHHHHH
Q 023849 44 WFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDF--------DLNNFQDGVLSSAFMVGLL 115 (276)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 115 (276)
.++..+.+.+..+.+++..+|..+++... +-+...| +.++...+.+..+..+|.+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt-----------------~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti 98 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVT-----------------KILGYLYYHGDESGGHYPSGVLALVNAAALVGTI 98 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHH-----------------HHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHH
Confidence 44555667777888888888877776422 2332222 2456677899999999999
Q ss_pred HHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh-------hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhh
Q 023849 116 VASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKK 188 (276)
Q Consensus 116 i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 188 (276)
+|++++|++.|++|||+++...++++.++.+++++.. -..++.+.|++.|+|.|+-+|...+..+|....+.|
T Consensus 99 ~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~R 178 (538)
T KOG0252|consen 99 FGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTR 178 (538)
T ss_pred HHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccc
Confidence 9999999999999999999999999999999887763 367889999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHhhc----------------ccchhHHHHHhHHHHHHHHHHHHhhcccccCCC
Q 023849 189 TAWLGVFYMCLPSGYAIGYVYGGWVG----------------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGF 247 (276)
Q Consensus 189 ~~~~~~~~~~~~~g~~~g~~~~~~l~----------------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (276)
|...+.+......|...|.+++-.+. ..-||..+.+.+++++..+.. -+.+||+++..
T Consensus 179 Ga~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 179 GAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYT 252 (538)
T ss_pred cceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHH
Confidence 99999888888888777666554432 124998888877665433222 22357776554
No 100
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.64 E-value=2.2e-15 Score=130.84 Aligned_cols=141 Identities=14% Similarity=0.108 Sum_probs=114.4
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCCh----hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF----RLIGVGLTVWTLAVVGCGFSFSFWMIAICRML 163 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 163 (276)
.+|.+.+++|.+..++|++.+++.++..++++++|++.||+||| +.+.++..+. ........++++.+++.|++
T Consensus 26 ~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l 103 (382)
T PRK11128 26 FWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGL 103 (382)
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHH
Confidence 44677788999999999999999999999999999999999984 3333222222 22334445789999999999
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHH
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPF 232 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~ 232 (276)
.|++.+...+...+++.++ .++|++..+......++|.++||++++++. ++|||..|++.++..++.
T Consensus 104 ~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~ 171 (382)
T PRK11128 104 FNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASM 171 (382)
T ss_pred HHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 9999888888888877776 466888889899999999999999999998 789999999887654443
No 101
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.64 E-value=2.7e-15 Score=129.20 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=123.0
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSF--WMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~ 168 (276)
.+.+++|.+..+.+++.+.+.++..+++++.|++.||+|||+.+.++..+.+++.++..+.++. ..+++..++.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 309 (377)
T TIGR00890 230 PYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTW 309 (377)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHh
Confidence 4557788888889999999999999999999999999999999999998888888777766643 33456678888888
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPF 232 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~ 232 (276)
+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+. ..||++.|++.+++.++.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 310 GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888888889999999999999999999999999999999999988 889999999887765543
No 102
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.64 E-value=3.2e-14 Score=122.85 Aligned_cols=147 Identities=12% Similarity=0.157 Sum_probs=124.9
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
++.+++|.++.+.+++.+...+...++.++.|++.||+|||+.+.++.++..+......+.++.+.+.+.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999988888777888899999999999999999888777666666666677888888889999999898
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
..+....++.|..|+ ++++++++++....+|..++|.+++.+. ..||+..|++.+++.++..++.++
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 888888899999875 5679999999999999999999999988 789999999988877666655443
No 103
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.62 E-value=1.6e-14 Score=123.10 Aligned_cols=145 Identities=21% Similarity=0.224 Sum_probs=134.4
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChh-hHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFR-LIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASF 171 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 171 (276)
.+.+|.+..+.+++.+...++..++.++.+++.||+|||+ .+..+..+..++.++....++.+.+.+..++.|++.+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 282 (352)
T cd06174 203 QEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFA 282 (352)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhcc
Confidence 3445889999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 172 ISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 172 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
.+....++.|..|+++|++.+++.+....+|..++|.+.+.+. ..+|++.+++.+++.++..+..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 283 FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999999999999999999999999998 88999999999988877666544
No 104
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.62 E-value=5.6e-14 Score=123.43 Aligned_cols=152 Identities=19% Similarity=0.104 Sum_probs=131.7
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
+..+.+|.+..+.+++.+.+.++..++.++.+++.||.++++.+..+..+.+++.++..+.++.+...++.++.|++.+.
T Consensus 249 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 328 (417)
T PRK10489 249 LADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAI 328 (417)
T ss_pred HHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 33444899999999999999999999999999999998888888888888888888888888888888889999999888
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
..+...+++.|..|++.||+++|++.....+|..+||.+.|++. ..|++..++..+...++..++.....++
T Consensus 329 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 329 SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 87888889999999999999999999999999999999999999 7888988888887766666666555454
No 105
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.61 E-value=1.7e-14 Score=126.09 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=125.1
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
|.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.....++.++..+.++.+.+.+..++.|++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV 323 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 45566789999999999999999999999999999999999999988777777777777777788778888888999888
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-cchhHHHHHhHHHHHHHHHHHHh
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-YNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
...+...+++.|.+|+++|++.+|+.+....+|..++|.+.|.+. . .+|...++......++..++.++
T Consensus 324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999999999999999999999999999999987 3 45666666665555444444443
No 106
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.61 E-value=2.1e-14 Score=126.22 Aligned_cols=151 Identities=15% Similarity=0.107 Sum_probs=104.9
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh---hhhh-----HHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG---FSFS-----FWMIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~r~ 162 (276)
++.+++|++..+.|++.+.+.++..++++++|+++||+|||+++.++..+.++...... .++. +...+++++
T Consensus 36 ~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (420)
T PRK09528 36 WLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGI 115 (420)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777999999999999999999999999999999999999999887666554433211 1111 111122233
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
+.|.+.....+....+..+ . .++++..+|.......+|..++|.+++.+...+|++.|++.+++.++..++.++..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 116 YLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhccccc
Confidence 3333322322333333222 1 2456778888999999999999999998886699999999888777666665555544
Q ss_pred c
Q 023849 243 Q 243 (276)
Q Consensus 243 ~ 243 (276)
+
T Consensus 194 ~ 194 (420)
T PRK09528 194 A 194 (420)
T ss_pred c
Confidence 3
No 107
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.61 E-value=3.7e-14 Score=123.37 Aligned_cols=188 Identities=16% Similarity=0.150 Sum_probs=148.3
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCcccccc-ccCCCchhHHHHHHHHHHHHHHHHhHHH
Q 023849 44 WFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFA 122 (276)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~g 122 (276)
.+.+||.+.++.+..++.....+.+..... |++++ |.+.+.+..|++.++..++.+++++.+|
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~w----------------pYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~ 92 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMW----------------PYLQKLDPTATATFFGLVIAASSLGHAIFSLIFG 92 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecc----------------hhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhc
Confidence 345566788888888888777776665443 56655 5777888889999999999999999999
Q ss_pred HhhhccCC-hhhHHHHHHHHHHHHHHH-hhh---h-hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHH
Q 023849 123 SLARSVNP-FRLIGVGLTVWTLAVVGC-GFS---F-SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFY 196 (276)
Q Consensus 123 ~l~d~~gr-r~~~~~~~~~~~~~~~~~-~~~---~-~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 196 (276)
+...|.+. |+.++.+.++.+++.++. ++. + ..+.++++|++.|+|.+.. ...-+|+++....++|.++++...
T Consensus 93 ~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~ 171 (488)
T KOG2325|consen 93 IWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATS 171 (488)
T ss_pred ccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhh
Confidence 99999986 888999999999999887 333 2 6788999999999996555 566899999888899999999999
Q ss_pred HHhhhhhhHHHHHHHhhc---ccc-----------hhHHHHHhHHHHHHHHHHHHhhcccccCCCC
Q 023849 197 MCLPSGYAIGYVYGGWVG---HYN-----------WRYAFWGEAILMFPFAVLGFVMKPLQLKGFA 248 (276)
Q Consensus 197 ~~~~~g~~~g~~~~~~l~---~~~-----------w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (276)
.+..+|.++||.++..+. ..| +..+-|+.+++.++.++.++++.+|..+...
T Consensus 172 ~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~ 237 (488)
T KOG2325|consen 172 GGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGII 237 (488)
T ss_pred hHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcc
Confidence 999999999998887765 222 3456677777777777777777666655443
No 108
>PRK12382 putative transporter; Provisional
Probab=99.61 E-value=4.9e-14 Score=122.75 Aligned_cols=144 Identities=14% Similarity=0.168 Sum_probs=125.4
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhh
Q 023849 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
++.+.+ ..++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+.+..++.|++.+...+
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 244 ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH
Confidence 345554 356667778888899999999999999999999999999888888888888888888899999999998888
Q ss_pred cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 174 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.....+.+.+|+++||++.|+++....+|..++|.+.+++. +.||++.|++.+++.++..++.+++
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 88888999999999999999999999999999999999998 7899999999998877776665544
No 109
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.60 E-value=7.8e-15 Score=130.29 Aligned_cols=146 Identities=15% Similarity=0.174 Sum_probs=120.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc--CChhhHHH--HHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV--NPFRLIGV--GLTVWTLAVVGCGFSFSFWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--grr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 165 (276)
+.+.+++|.+..+.+++.++..++..+++++.|++.||. ++|+...+ +.++.+++.+++.+.++++.+++.+++.|
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G 344 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG 344 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 344567899999999999999999999999999999973 34443333 33444455556667788999999999999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc-chhHHHHHhHHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~~~~~~~~~~~~~~~ 235 (276)
++.+...+...+++.|.+|++++++.+++++....+|.++||.++|.+. .. +|++.|++.+++.++..+.
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988 54 6999999988876655443
No 110
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.60 E-value=3.2e-14 Score=126.79 Aligned_cols=149 Identities=14% Similarity=0.024 Sum_probs=114.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHH--HHhhhhhHHHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV--GCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
++++++|++..+.++..+.+.++..++.++.|+++||+|||+.+.+...+..++.. .....++.+.+.+.+++.|++.
T Consensus 284 yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 284 YAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 66778999999999999999999999999999999999999887665544443332 2223356666677888888654
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh-hhhHHHHHHHhhcc-------------cchhHHHHHhHHHHHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVGH-------------YNWRYAFWGEAILMFPFAV 234 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~-------------~~w~~~~~~~~~~~~~~~~ 234 (276)
..........+.|.+|++.||++.|+.+...++ |..++|.+.|++.. .+|+..|++.++..++..+
T Consensus 364 ~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 364 FGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCIC 443 (467)
T ss_pred hhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHH
Confidence 444333446677999999999999999999886 77889998888864 5799999988777766655
Q ss_pred HHHhh
Q 023849 235 LGFVM 239 (276)
Q Consensus 235 ~~~~~ 239 (276)
..++.
T Consensus 444 ~~~~~ 448 (467)
T PRK09556 444 LMAIV 448 (467)
T ss_pred HHHHH
Confidence 55443
No 111
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.60 E-value=6.2e-14 Score=121.78 Aligned_cols=143 Identities=13% Similarity=0.033 Sum_probs=127.9
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
.+.+++|.++.+.|++.+...++.++..++.+++.||+|+|+.+.++.++..+..++.+++++.+.+++.+++.|+..+.
T Consensus 230 ~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~ 309 (382)
T TIGR00902 230 IYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAV 309 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHH
Confidence 33456999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHH-HHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHH
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~ 235 (276)
..+....++.+. |+++|++..++++ ....+|.++|+.++|++. ..|+ ..|+..++++++.+++
T Consensus 310 ~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 310 CHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999998 9999999999986 567899999999999999 7786 6677777777655433
No 112
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.59 E-value=4.4e-14 Score=126.80 Aligned_cols=141 Identities=12% Similarity=0.079 Sum_probs=110.9
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~ 168 (276)
++++++|.+..+.+++.+.+.++.+++.++.|+++||+|||+++.++.++..+..++.... .+.+.+.+..++.++..
T Consensus 301 ~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (496)
T PRK03893 301 YLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLG 380 (496)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHh
Confidence 3446899999999999999999999999999999999999999888877766655443332 23344444455544443
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~ 231 (276)
....+..+.++.|.+|+++|++.+++.+....+|..+||.++|.+. ..||++.+...+....+
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 381 QGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred cccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 3445667788999999999999999999999999999999999998 88999888665544433
No 113
>PRK03699 putative transporter; Provisional
Probab=99.59 E-value=9e-14 Score=121.26 Aligned_cols=148 Identities=14% Similarity=0.100 Sum_probs=124.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
++++++|++..+.+++.+.+.++..++.++.|+++||+++|+.+.....+.++..++....++.+.+.+..++.|++.+.
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 310 (394)
T PRK03699 231 YAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSA 310 (394)
T ss_pred HHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 55577899999999999999999999999999999999999999888877777777776777777777788889998888
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.++...++..+..| ++++...+.......+|..++|.+.+++. ..||+..+++.+++.++..+..+..
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 311 IYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 88888888888776 45677888888899999999999999998 7899999998888776665544433
No 114
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.59 E-value=4.9e-14 Score=125.14 Aligned_cols=154 Identities=8% Similarity=-0.087 Sum_probs=121.1
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-----h------hHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----F------SFWMIA 158 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~ 158 (276)
|.+.+++|.+..+.++......++.+++.++.|++.||+|||+.+.++.++.+++.++..+. + +...+.
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 56777889988888999999999999999999999999999999999888877776666521 1 222233
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
...++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+. +.+|++.|++.++++++..++.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 33333333223334666777899999999999999999999999999999999888 78999999999888877777766
Q ss_pred hhcccc
Q 023849 238 VMKPLQ 243 (276)
Q Consensus 238 ~~~~~~ 243 (276)
++.||.
T Consensus 468 ~~~~~~ 473 (481)
T TIGR00879 468 FFLPET 473 (481)
T ss_pred eecccC
Confidence 665553
No 115
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.59 E-value=3e-14 Score=123.28 Aligned_cols=146 Identities=15% Similarity=0.015 Sum_probs=109.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChh--hHH------HHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFR--LIG------VGLTVWTLAVVGCGFSFSFWMIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~r~ 162 (276)
++.+++|.+..+.+++.+...++..++.++.|++.||+|||+ ... .+.++..+........++.+..+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 556778999999999999999999999999999999999996 111 111111111122222234444444444
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc-hhHHHHHhHHHHHHHHHHHH
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~-w~~~~~~~~~~~~~~~~~~~ 237 (276)
+.+++.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+. ..| |++.|++.+++.++..+..+
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 321 LGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 4444444 77888999999999999999999999999999999999999998 667 99999988887766655544
No 116
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.58 E-value=2.2e-14 Score=125.35 Aligned_cols=138 Identities=17% Similarity=0.247 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhc
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 182 (276)
.+.+.+++.++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+.+.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666777888889999999999999999999999888888887777778888888999999999999999999999999
Q ss_pred CcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
.|+++||+.+++.+....+|..+||.+++.+. ..||++.|++.+++.++..+..++..
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 88999999999988877776665543
No 117
>PRK03545 putative arabinose transporter; Provisional
Probab=99.56 E-value=3.7e-13 Score=117.18 Aligned_cols=149 Identities=15% Similarity=0.125 Sum_probs=121.9
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHH-HHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAV-VGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+.+.+++|.+..+.+++.+.+.++..+++++.|++.||+|+|... .+..+..++. .+....++.+.+++..++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 456667899999999999999999999999999999999988654 4444444433 34455677888888899999988
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
+...+.....+.+..| ++|++++|+++....+|..+||+++|++. +.|++..|++.+++.++.++...+..
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 7777777788888877 68899999999999999999999999999 89999999999888777666655543
No 118
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.56 E-value=1.3e-13 Score=123.48 Aligned_cols=152 Identities=18% Similarity=0.196 Sum_probs=128.2
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLV 164 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~ 164 (276)
+.+..+..-|+..++++.....+..++.++++|.++||++||++++.+.++.++..++.++. .+.+.+++.-++.
T Consensus 34 ~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 34 AWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLL 113 (524)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 34555566688899999999999999999999999999999999999988776655443332 3788899999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
|++.+...|...+++.|..|+++...+.++.++..++..++||.++|.+. ..|-.++|.+.++..++..+.+..+++
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999988 788889998887765554444444443
No 119
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.56 E-value=3.4e-13 Score=117.14 Aligned_cols=143 Identities=11% Similarity=0.102 Sum_probs=118.4
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
|.+.++.|.+..+.+++.+.+.++.++++++.|++.||+|+|+++..+..+..++.+... . ...+....++.|++..
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~ 300 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGF 300 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHH
Confidence 455566789988999999999999999999999999999999999888888777665433 2 2334456778888777
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHH
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~ 235 (276)
...+...+++.|..|+++++...+.++...++|..+||.++|++. +.+|++.|++.+.+.++..+.
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 788999999999999888888888888899999999999999998 889999999988776554433
No 120
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.55 E-value=7.4e-13 Score=115.49 Aligned_cols=153 Identities=12% Similarity=0.123 Sum_probs=119.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEA 169 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~ 169 (276)
.+.+++|.+..+.+...+.+.++.+++.++.|++.||+|||+.+.++..+.+++.++....+ +...+ .-++.|++.+
T Consensus 230 ~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g 307 (393)
T PRK09705 230 AFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLG 307 (393)
T ss_pred HHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhcc
Confidence 44456899999999999999999999999999999999999999988877777766544323 22222 2346688888
Q ss_pred hhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc-chhHHHHHhHHHHHHHHHHHHhhcccccC
Q 023849 170 SFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
...+.......+..+ ++++++.+++.+....++..++|.+.+++. .. +|...|++.++..++..+....+.||++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 308 GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 877877777777775 678999999999999999999999999998 44 48888888777776666666666666543
No 121
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.55 E-value=7.2e-14 Score=124.83 Aligned_cols=155 Identities=10% Similarity=-0.031 Sum_probs=117.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh--hH-H-HHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SF-W-MIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~r~l~G 165 (276)
|.+.++.|.+.....+......++.+++.++.|+++||+|||+.++++.++.+++.++++... +. + ....+.++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 566677888877777777788888999999999999999999999999999888877665432 11 1 2223344444
Q ss_pred hhhhhh-hhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhh------c-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 166 VGEASF-ISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV------G-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 166 ~~~~~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
++.+.. .+....++.|.+|+++|++++|+.+....+|.++++.+.+.+ . ..+|++.|++.+++.++..++.+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 444432 366788999999999999999999999999998886555433 3 67899999998888777777766
Q ss_pred hhccccc
Q 023849 238 VMKPLQL 244 (276)
Q Consensus 238 ~~~~~~~ 244 (276)
++.||++
T Consensus 455 ~~~~e~~ 461 (479)
T PRK10077 455 KFVPETK 461 (479)
T ss_pred hccccCC
Confidence 6666644
No 122
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.55 E-value=8.1e-14 Score=121.41 Aligned_cols=135 Identities=13% Similarity=0.155 Sum_probs=112.2
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHH-HHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV-GCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+++.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++..+..+..+ +....++.+.+.+..++.|++.
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 355667899999999999999999999999999999999999998888776533332 3334456666777777778777
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc-hhHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWG 224 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~-w~~~~~~ 224 (276)
+...+....++.|.+|+++|++++|+.+....+|..++|++.|++. ..| |+..+..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 7777888899999999999999999999999999999999999998 667 7766554
No 123
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.54 E-value=3.6e-13 Score=118.86 Aligned_cols=155 Identities=14% Similarity=0.176 Sum_probs=123.0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh----ccCChhhHHHH-HHHHHHHHHHHhhhhhHH---------
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR----SVNPFRLIGVG-LTVWTLAVVGCGFSFSFW--------- 155 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~grr~~~~~~-~~~~~~~~~~~~~~~~~~--------- 155 (276)
+.+.+++|.+....+++..+..+..++.+++.|+++| |+|||+.++++ ....+++.++++++++.+
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 3466789999999999999999999999999999999 59999998875 566666667777766542
Q ss_pred --------HHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhh--hHHHHHHHHHhhhhhhHHHHHHHhhc---c-------
Q 023849 156 --------MIAICRMLVGVGEASFISLAAPFIDDNAPVAKK--TAWLGVFYMCLPSGYAIGYVYGGWVG---H------- 215 (276)
Q Consensus 156 --------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~---~------- 215 (276)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+.+.++|.++|+.++++.. .
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 233334455567778888889999999998865 67999999999999999999998752 1
Q ss_pred ------cchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 216 ------YNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 216 ------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
.+.|+.|++.+++.++..++..+..+|.+
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 16789999988887777777776666654
No 124
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.53 E-value=8.4e-13 Score=118.24 Aligned_cols=150 Identities=19% Similarity=0.286 Sum_probs=134.6
Q ss_pred ccc-ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGI-QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
|.+ .+++|.+...+|++.+.+.+|.++++++.+++.+|+++++.+..+.++.+++.+..+++++.+..++..++.|++.
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~ 321 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAW 321 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 455 4678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
........+.+.+..|++.||++++++++....+..+|.++.|.+. ..|.+..+.+.++..++..++.+..
T Consensus 322 ~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 322 IIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 8899999888776655555444433
No 125
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.53 E-value=6e-14 Score=121.53 Aligned_cols=139 Identities=9% Similarity=0.027 Sum_probs=111.2
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHH--HHHhh--hhhHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAV--VGCGF--SFSFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~r~l~G~ 166 (276)
++++++|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+..+..+.. +...+ .++.+.+.+..++.|+
T Consensus 245 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 324 (394)
T TIGR00883 245 YLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLAL 324 (394)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 4457789999999999999999999999999999999999998775554443322 22222 2466777788889999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHH-HHHHhhhhhhHHHHHHHhhc-ccc-hhHHHHHhHHHH
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGV-FYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWGEAILM 229 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~-~~~-w~~~~~~~~~~~ 229 (276)
+.+...+...+++.|.+|+++|+++.++ .+....+|..++|.+++++. +.| |++.++...+..
T Consensus 325 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 325 IGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 9889999999999999999999999997 45666788999999999998 666 888777665543
No 126
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.52 E-value=4.3e-14 Score=119.36 Aligned_cols=177 Identities=16% Similarity=0.109 Sum_probs=144.8
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
+.+.+..+++++++.+..++.+..+.. -++.|+.|++..+.++..+.+-++...|.+++||++|
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p----------------~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSD 313 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGP----------------LYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSD 313 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHH----------------HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345678889999999999998877654 4778899999999999999999999999999999999
Q ss_pred cc--CChhhHHHH-HHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh
Q 023849 127 SV--NPFRLIGVG-LTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS 201 (276)
Q Consensus 127 ~~--grr~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 201 (276)
|+ |||....+. ++...++.+..-+++ |+++..++.++.|+..-+..-.......|..|++--|++.|+.+.+..+
T Consensus 314 klfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl 393 (448)
T COG2271 314 KLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYL 393 (448)
T ss_pred HhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHH
Confidence 95 677665443 444444445555555 5688888999999988888888888889999999999999999999999
Q ss_pred -hhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 202 -GYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 202 -g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
|.+.+....+++. .+||...|.+..+.++++.++.+..
T Consensus 394 ~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 394 IGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 8888888888887 7899999998887776666655544
No 127
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.50 E-value=4.8e-13 Score=118.16 Aligned_cols=149 Identities=13% Similarity=-0.009 Sum_probs=105.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc--CChhhH-HH---HHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV--NPFRLI-GV---GLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--grr~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 164 (276)
++.+++|++..+.+...+.+.++..++.++.|+++||+ ++|+.. .. +..+..+...... ..+.....+..+..
T Consensus 269 ~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 347 (434)
T PRK11663 269 YMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTI 347 (434)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHH
Confidence 45577899999999999999999999999999999998 333322 22 1111111111122 22333333444445
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
|++...........+.|.+|+++|++++|+.+....+|.+++|.+.+++. ..||+..|++.++..++..+..+...
T Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 348 GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433223333456789999999999999999999999999999999998 78999999999888777766555443
No 128
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.50 E-value=2.8e-13 Score=119.55 Aligned_cols=155 Identities=11% Similarity=-0.005 Sum_probs=122.5
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc----cCChh-hHHHHHHHHHHHHHHHhhhhh------HHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFR-LIGVGLTVWTLAVVGCGFSFS------FWMIA 158 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~grr~-~~~~~~~~~~~~~~~~~~~~~------~~~~~ 158 (276)
+++.+++|+++.++|++.++..+..++..++.|+++|| +|||| .++++....+++.+++...++ +..++
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 103 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAY 103 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 57788899999999999999999999999999999997 67744 566777777777777665543 45667
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcC-cchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--------ccchhHHHHHhHHHH
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--------HYNWRYAFWGEAILM 229 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~w~~~~~~~~~~~ 229 (276)
+.+++.+++.+.......++..|.. ++++|++..++.+.+..+|..+++.+.+.+. ..+||+.+++.+++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~ 183 (437)
T TIGR00792 104 ITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIG 183 (437)
T ss_pred HHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHH
Confidence 7788888888887777778888887 5789999999999888888877665544332 358999999999888
Q ss_pred HHHHHHHHhhccccc
Q 023849 230 FPFAVLGFVMKPLQL 244 (276)
Q Consensus 230 ~~~~~~~~~~~~~~~ 244 (276)
++..++.++..+|++
T Consensus 184 ~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 184 VVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHcCCEecC
Confidence 777666655555543
No 129
>TIGR00895 2A0115 benzoate transport.
Probab=99.49 E-value=7.2e-13 Score=115.02 Aligned_cols=124 Identities=18% Similarity=0.079 Sum_probs=104.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
|.+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+....+......++.....+.+.+.+..++.|++.+
T Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 274 PKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 56778889999999999999999999999999999999999955444443333333333335677778888899999999
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
...+...+++.|.+|+++|++++|+......+|..+||.++|++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999998875
No 130
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.49 E-value=4.2e-13 Score=119.89 Aligned_cols=147 Identities=11% Similarity=-0.016 Sum_probs=107.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCCh-------hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF-------RLIGVGLTVWTLAVVGCGFSFSFWMIAICRML 163 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 163 (276)
++.+++|++..+.+.+.+++.++..++.++.|+++||++|| ..+.+..++.++..++....++.+..++..++
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l 357 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMIL 357 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 45677899999999999999999999999999999999865 23333333333444445556666666666677
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.+++.+...+...+++.+..| +.+|...|+.+.+..+|..++|.+.+ .. ..+|+..|++.+++.++..++.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 358 FSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 777666665656666666654 78999999998888888888776654 22 4579999999988877776666554
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.49 E-value=1.9e-12 Score=114.74 Aligned_cols=149 Identities=16% Similarity=0.220 Sum_probs=129.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCCh--hhHHHHHHHHHHHHHHHhh--------hhhHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGLTVWTLAVVGCGF--------SFSFWMIAIC 160 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 160 (276)
+..+++|++..+...+..+..+..++|++++|++.||+|.| +++..++++..+..+...+ .++-+.+.+.
T Consensus 307 ~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~ 386 (477)
T PF11700_consen 307 YATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL 386 (477)
T ss_pred HHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH
Confidence 55679999999999999999999999999999999999999 8888888887665555444 5788889999
Q ss_pred HHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 161 RMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 161 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
-++.|++.|..++...++.+++.|+++.+..+|++.........+||++.+.+. ..+-|+.++...++.++.+++.++
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999998 445888888887776666665544
Q ss_pred h
Q 023849 239 M 239 (276)
Q Consensus 239 ~ 239 (276)
.
T Consensus 467 v 467 (477)
T PF11700_consen 467 V 467 (477)
T ss_pred c
Confidence 4
No 132
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.49 E-value=2.6e-12 Score=112.35 Aligned_cols=148 Identities=15% Similarity=0.119 Sum_probs=115.1
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHH-HHHHHHHHHHHHHhh-----hhhHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIG-VGLTVWTLAVVGCGF-----SFSFWMIAICRML 163 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l 163 (276)
|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+...+..+.+.+ .++.+.+++..++
T Consensus 246 p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (402)
T TIGR00897 246 PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIA 325 (402)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence 4566779999999999999999999999999999999999988764 333333333222221 2466777788888
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.|++.+...+. ...+.+..| ++|++++|+.+....+|..++|.+++.+. ..||+.++++.++..++..++..+.
T Consensus 326 ~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 326 LGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 89888776553 456667655 68999999999999999999999999998 7899999999988877766665554
No 133
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.48 E-value=1.7e-12 Score=107.78 Aligned_cols=149 Identities=19% Similarity=0.221 Sum_probs=136.8
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
|.++.+++++|++.+..|++.++..++..+.+++..++.+|+|.++.+..++++.+++.++-... +.+.++.+-.+.|.
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~ 111 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGA 111 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHh
Confidence 47789999999999999999999999999999999999999999999999999999999998877 88889999999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc-chhHHHHHhHHHHHHHHHHHH
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~~~~~~~~~~~~~~~~~ 237 (276)
|.+......++++-+.+| |+-+..+|+|.+..++|..+++.+.-.+. +. +||....+-+.++++.++.++
T Consensus 112 gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 112 GIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred hHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 88899999999999999999999888888 44 799999888888766665544
No 134
>PRK09952 shikimate transporter; Provisional
Probab=99.48 E-value=3.5e-12 Score=112.84 Aligned_cols=149 Identities=15% Similarity=0.072 Sum_probs=111.1
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh---h-hhHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF---S-FSFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~r~l~G~ 166 (276)
++.+++|.+......+.....+...++.++.|+++||+|||+++.++.++.+++.+.+.. . ++.+.+++..++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 556778888776666666667777889999999999999999988887766554433222 1 234444556677788
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHH-HhhhhhhHHHHHHHhhc--c-cchhHHHHHhHHHHHHHHHHHHhh
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYM-CLPSGYAIGYVYGGWVG--H-YNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~--~-~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+.+...+...+++.|.+|.+.|+.+.++.+. +..+|+.++|.+.+++. . .+|+..+...++..++..+..+..
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8888888889999999999999999888554 45589999999999986 2 358888887777766665555443
No 135
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.47 E-value=3.5e-12 Score=110.82 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=118.7
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhh
Q 023849 92 IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASF 171 (276)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 171 (276)
+.++.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+..++.+.+++..++.|++.+..
T Consensus 231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 310 (382)
T PRK11128 231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC 310 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 33568999999999999999999999999999999999999999999999998888888999999999999999999998
Q ss_pred hhcHHHHHhhcCcchhhhHHHHHHH-HHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHH
Q 023849 172 ISLAAPFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPF 232 (276)
Q Consensus 172 ~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~ 232 (276)
.+....++.+. +++++++..++++ ....+|..+||.++|.+. ..|+ ..|+..+++.++.
T Consensus 311 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 311 HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 89888888887 5666788899886 556778899999999998 6677 4666666655433
No 136
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.47 E-value=2e-12 Score=114.88 Aligned_cols=149 Identities=11% Similarity=-0.021 Sum_probs=105.7
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc--CChhhH-HHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV--NPFRLI-GVGLTVWTLAVVGCGF--SFSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~--grr~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G 165 (276)
++++++|++..+.++....+.++..++.++.|+++||+ +||... +....+..++.++..+ ..+.+...+..++.|
T Consensus 279 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 358 (452)
T PRK11273 279 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIG 358 (452)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 55666889988999999999999999999999999999 555432 2222333333322222 234444445555555
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH-HHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI-GYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.+..........++.|.+|++.||+++|+.+....+|..+ +|.+.+++. ..||+..|++.++.+++..+....+
T Consensus 359 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 359 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 5433333333456789999999999999999888888655 799999998 8899999998888777766666555
No 137
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.45 E-value=9.2e-12 Score=111.63 Aligned_cols=151 Identities=9% Similarity=0.068 Sum_probs=117.4
Q ss_pred cccccccCCCchhHHHHHH-HHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHH---Hhhh-hhHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSS-AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG---CGFS-FSFWMIAICRMLV 164 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~r~l~ 164 (276)
|++.+++|++..+.+++.. ...++.+++.++.|+++||+|+|+.+.++.++.++..++ .+.. ++.+.+.+.-++.
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4556778999999999974 556899999999999999999998877766655544332 2232 3555555556665
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
.++.+...+...++..+..+++.+++..++.+....+|..+++.+.|++. ..||+..|.+.++++++..+..++.+
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 65556666667888889999999999999999999999998888888888 78999999998888877766666553
No 138
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.44 E-value=5.1e-12 Score=113.73 Aligned_cols=155 Identities=12% Similarity=0.016 Sum_probs=102.6
Q ss_pred cccccccCCCchhHHH------------HHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhh----
Q 023849 90 TGIQGDFDLNNFQDGV------------LSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS---- 153 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~---- 153 (276)
|.+.++.|.+..+.+. ...+..++..++.++.++++||+|||++++++..+.+++.++.++..+
T Consensus 312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~ 391 (502)
T TIGR00887 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST 391 (502)
T ss_pred HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 4555667765432211 233444566678899999999999999998888777776655554321
Q ss_pred HHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c----------cchhHHH
Q 023849 154 FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H----------YNWRYAF 222 (276)
Q Consensus 154 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~----------~~w~~~~ 222 (276)
...+...-+...++.....+....+.+|.+|.+.|+++.|+.+....+|.+++|.+.+++. . .++...|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 471 (502)
T TIGR00887 392 HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVL 471 (502)
T ss_pred hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHH
Confidence 1111111111122222334556677899999999999999999999999999999988876 2 2345677
Q ss_pred HHhHHHHHHHHHHHHhhcccccC
Q 023849 223 WGEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
++.+++.++..+.. ++.||++.
T Consensus 472 ~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 472 EIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHh-eEeccCCC
Confidence 77777766655543 45576543
No 139
>PRK15075 citrate-proton symporter; Provisional
Probab=99.44 E-value=4.6e-12 Score=111.95 Aligned_cols=129 Identities=11% Similarity=-0.001 Sum_probs=95.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHH-HH---hhhhhHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV-GC---GFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~r~l~G~ 166 (276)
++++.+|++..+.++....+.++..++.++.|+++||+|||+++.++..+.++..+ .. ...+++..+.+..++.|+
T Consensus 264 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK15075 264 FGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSF 343 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 44556899988889999899999999999999999999999998876554433221 11 112344444555666677
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHH-HhhhhhhHHHHHHHhhc-ccchh
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYM-CLPSGYAIGYVYGGWVG-HYNWR 219 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~-~~~w~ 219 (276)
+.+...+....++.|.+|+++|++.+++.+. +..++..++|.+.+++. ..|++
T Consensus 344 ~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 344 LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 7777777777889999999999999998654 44445778999999887 66654
No 140
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.44 E-value=9.6e-13 Score=113.69 Aligned_cols=144 Identities=19% Similarity=0.200 Sum_probs=127.8
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhhhhhh
Q 023849 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEASFI 172 (276)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~ 172 (276)
+|++++++.-+.+.|..-.-+..+++||++|| +|+|+++..|.+++++|.++.+... +...++++.++.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 44999998888888888888999999999999 6999999999999999999999884 78889999999999999999
Q ss_pred hcHHHHHhhcCcch--hhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 173 SLAAPFIDDNAPVA--KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 173 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+...++++|.+|++ +|-..+++++++.++|+.++|++.+++. +.||...|...++-....++..++.
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999865 4778899999999999999999999999 9999999999887765555554444
No 141
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.44 E-value=9.1e-13 Score=116.55 Aligned_cols=154 Identities=12% Similarity=-0.025 Sum_probs=107.1
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHH---HHHHHHhh--hhhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWT---LAVVGCGF--SFSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~r~l~G 165 (276)
++++..|.+..+.++....+.++..++.++.|++.||+++++....+..+.. ++.+.... ..+.+...+..++.|
T Consensus 277 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 356 (438)
T TIGR00712 277 YLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIG 356 (438)
T ss_pred HHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 5556679999999999999999999999999999999965432223332221 12222112 123333334445555
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhh-hHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY-AIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
++...........+.|.+|+++|++++|+.+....+|. +++|.+.|.+. +.||.+.|++..++.++..+..++++||+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 357 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 54322222223467899999999999999998888764 68999999998 78999999988887777777777777664
Q ss_pred c
Q 023849 244 L 244 (276)
Q Consensus 244 ~ 244 (276)
+
T Consensus 437 ~ 437 (438)
T TIGR00712 437 K 437 (438)
T ss_pred c
Confidence 3
No 142
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.43 E-value=5.9e-12 Score=110.70 Aligned_cols=147 Identities=9% Similarity=-0.043 Sum_probs=109.0
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCC-hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+++.+++|++..++|++.+++.++.+++++++|+++||+|+ |+++.++.++..+...+..+.++++.+.+.|++.|++.
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY 106 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 57788899999999999999999999999999999999965 77888888888888888888899999999999999987
Q ss_pred hhhhhcHHHHHh--------hcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 169 ASFISLAAPFID--------DNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 169 ~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+...+...++.. |......|.+..| .+|.+++|.+++.+. ...|+. |++.+++.++..++ .+.
T Consensus 107 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~-~~~ 178 (418)
T TIGR00889 107 MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVF-ALT 178 (418)
T ss_pred ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHH-Hhc
Confidence 766665555432 2122223444444 468888999888886 444654 44555555544443 334
Q ss_pred ccccc
Q 023849 240 KPLQL 244 (276)
Q Consensus 240 ~~~~~ 244 (276)
.||.+
T Consensus 179 ~~e~~ 183 (418)
T TIGR00889 179 LPDIP 183 (418)
T ss_pred CCCCC
Confidence 45543
No 143
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1e-11 Score=105.94 Aligned_cols=150 Identities=15% Similarity=0.114 Sum_probs=126.9
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhh
Q 023849 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVG 167 (276)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~ 167 (276)
-|.+++..|++.+.++++.-.|.++.++|+++.|++.|| +.|+.+.....+.++..+...+. ++.+..++.-++.|++
T Consensus 235 ~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 235 RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 378899999999999999999999999999999999999 89999888877777766655544 4566667777778888
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
.+.........+++ .-++.+..+.++.....++|..+|..++|.+. ++|+..+.++.+++.++.+++.+...
T Consensus 314 ~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 314 FSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777 44588999999999999999999999999999 99999999999998877777665543
No 144
>PRK10504 putative transporter; Provisional
Probab=99.42 E-value=1.3e-11 Score=110.12 Aligned_cols=125 Identities=11% Similarity=0.129 Sum_probs=105.7
Q ss_pred cccc-cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHH
Q 023849 90 TGIQ-GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS---FSFWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G 165 (276)
|++. ..+|.++.+.++....+.++..++.++.|++.||+|||+++.++.++.++...+..+. ++.+.+.+..++.|
T Consensus 285 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 285 PVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 3443 4588899999999999999999999999999999999999999988888776655543 33444556677888
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
++.+...+....++.+..|++.++.+.++.++...+|..+|+.+++.+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888888999999999999999999999999999999999988875
No 145
>TIGR00898 2A0119 cation transport protein.
Probab=99.42 E-value=1.7e-11 Score=110.40 Aligned_cols=137 Identities=14% Similarity=-0.018 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHhhhhhhhhcHHHHHhhc
Q 023849 105 VLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSF--WMIAICRMLVGVGEASFISLAAPFIDDN 182 (276)
Q Consensus 105 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 182 (276)
+......+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++..++.+++.+..++....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566778889999999999999999999999888888777766543 4555566777777788888889999999
Q ss_pred CcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
+|++.|++++|+.+....+|.+++|.+.+ +...++..++++.++..++..++.++ .||+
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 99999999999999999999999999988 55556777888877777666555543 4554
No 146
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.41 E-value=1.2e-11 Score=108.94 Aligned_cols=136 Identities=13% Similarity=0.095 Sum_probs=101.4
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh--h
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV--G 167 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~--~ 167 (276)
|.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.++..+..+.....++.....+.-++.|+ +
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 255 PTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT 334 (426)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 45555678888889999999999999999999999999999999988887776665544433221112222233333 2
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHh
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGE 225 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~ 225 (276)
.....+..+.++.|.+|+++|++++|+......+|..++|.+.+++. ..|+....++.
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 22334556678899999999999999999999999999999999998 77766543333
No 147
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=8e-12 Score=107.18 Aligned_cols=125 Identities=17% Similarity=0.271 Sum_probs=113.1
Q ss_pred ccccc-ccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHhh
Q 023849 90 TGIQG-DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS-FWMIAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G~~ 167 (276)
|.+.+ .+|.+..+.+++.+...++..++.++.+++.||++||+.+..+..+.+++.++..+.++ .+.+.+..++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVG 314 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 45544 48999999999999999999999999999999999999999888888888777777774 88888999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.+...+...+++.|..|+++|++..++.+....+|..++|.++|.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876
No 148
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.40 E-value=6.6e-12 Score=123.52 Aligned_cols=146 Identities=16% Similarity=0.078 Sum_probs=125.1
Q ss_pred cccccccCCCch-hHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNF-QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+++.+.+|++.. +.+++.+...++.++++++.|++.||+++++.+.++.++.+++.++..+..+.+.++++.++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 355677899988 8999999999999999999999999999999999998888888888888888888889999999999
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~ 235 (276)
+...+...+++.+..|++.||+++++.++...+|.++++.+++.+. ..++...|++.+.+.++..+.
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 405 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLY 405 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9998889999999999999999999999999999988888887776 345666676666554444333
No 149
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.40 E-value=2.2e-11 Score=107.48 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=103.4
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhhhhhhhh
Q 023849 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
.++ +....+++.++..++.+++.++++++.||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTG 330 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHH
Confidence 344 45667888888899999999999999999999999999998888887766655 4667777888899999999999
Q ss_pred cHHHHHhhcCc-------chhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccch
Q 023849 174 LAAPFIDDNAP-------VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNW 218 (276)
Q Consensus 174 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w 218 (276)
...++++|..| ++.+|...|+.+....+|..+++.+.+.+. ..||
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 331 LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998875 456799999999999999999999998886 4444
No 150
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.40 E-value=5.7e-12 Score=109.97 Aligned_cols=141 Identities=9% Similarity=0.070 Sum_probs=121.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHH
Q 023849 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (276)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 176 (276)
+.+....|.+.+...+...++.+..|++.||+|+|+.+.++..+.++...+...+++.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778889999999999999999999999999999999998888888878888999889999999999877777777
Q ss_pred HHHhhcCcchhhhHHHHH-HHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 177 PFIDDNAPVAKKTAWLGV-FYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 177 ~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
.++.+..+++.+++..+. ++....+|.++++.++|++. ..||+.+|++.+++.++..++..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 788888888888887766 67889999999999999999 78999999999888766665543
No 151
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.40 E-value=2.6e-11 Score=105.57 Aligned_cols=155 Identities=9% Similarity=-0.118 Sum_probs=115.2
Q ss_pred CccccccccCCCchhHHHH--HHHHHHHHHHHHhHH-HHhhhccCChhhHHHHHHHH-HHHHHHHh---hhhh-HHHHHH
Q 023849 88 PGTGIQGDFDLNNFQDGVL--SSAFMVGLLVASPIF-ASLARSVNPFRLIGVGLTVW-TLAVVGCG---FSFS-FWMIAI 159 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~-g~l~d~~grr~~~~~~~~~~-~~~~~~~~---~~~~-~~~~~~ 159 (276)
.+|.+.++.|.+.+++|++ .++..+...+.++++ ++..||+|||+..++++.+. .+.....+ ...+ ...++.
T Consensus 23 ~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (390)
T TIGR02718 23 ALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVG 102 (390)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHH
Confidence 4578889999999999997 466788888888888 45799999999876665432 21222222 2222 334445
Q ss_pred HHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 160 CRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 160 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
..++.++..+...+....+..|..++++++...+....+..+|.++|+...+++. ..|||..|++.+++.++..+..++
T Consensus 103 ~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 103 LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 5556667777777777888889888888888888888888999999998888888 889999999999887766666555
Q ss_pred hccc
Q 023849 239 MKPL 242 (276)
Q Consensus 239 ~~~~ 242 (276)
+.|+
T Consensus 183 ~~~~ 186 (390)
T TIGR02718 183 LKDR 186 (390)
T ss_pred cCCC
Confidence 5444
No 152
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.39 E-value=1.3e-12 Score=112.48 Aligned_cols=132 Identities=14% Similarity=0.082 Sum_probs=99.3
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC-ChhhHH-HHH-HHHHHHHHHHhh--hhhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-PFRLIG-VGL-TVWTLAVVGCGF--SFSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g-rr~~~~-~~~-~~~~~~~~~~~~--~~~~~~~~~~r~l~G 165 (276)
++.+++|.+..+.+++.+.+.++..++.++.|++.||+. +|+... ... ....++...... ..+...+.+..++.|
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 321 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALG 321 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 556778999999999999999999999999999999864 333222 211 112222222222 234555666677777
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAF 222 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~ 222 (276)
+......+....++.|.+|+++|+++.|+.+....+|..++|.+.|.+. ..||++.|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 322 FLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 7666666666778999999999999999999999999999999999998 88998754
No 153
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.38 E-value=3.1e-11 Score=106.62 Aligned_cols=148 Identities=9% Similarity=-0.002 Sum_probs=97.5
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh--h--hhhHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG--F--SFSFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~r~l~G~ 166 (276)
++.+++|.+..+.++..++..++..+++++.|+++||+|||+.+.++..+.++..+... . .++....+..-.+.++
T Consensus 269 ~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (432)
T PRK10406 269 YLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALL 348 (432)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 45567899988889988888888899999999999999999988776655433332111 1 1233322222222333
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh-hhhHHHHHHHhhcccc-hhHHHHHhHHHHHHHHHHHHh
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVGHYN-WRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~-w~~~~~~~~~~~~~~~~~~~~ 238 (276)
+.+...+....+++|++|++.|++++|+.+...++ .....|.+.+.+...| |...++..++..++..+..++
T Consensus 349 ~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 349 IVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 33444455667889999999999999998876554 3444777777665334 555666555555555444444
No 154
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.37 E-value=5.7e-11 Score=104.03 Aligned_cols=144 Identities=11% Similarity=-0.007 Sum_probs=112.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G 165 (276)
.+.+++|.++.+.++......++..++.++.|++.||+++|+.+.++..+.+++.++..+. .+.+.++++.++.|
T Consensus 241 ~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 320 (406)
T PRK15402 241 ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYA 320 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 3456789999999998888888899999999999999999999999888877777666543 35666778889999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~ 235 (276)
++.+...+......... ++++||++.++++....+|..+|+.+++.+. ..++....+..++..++..++
T Consensus 321 ~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 321 FGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 99888777666655444 4489999999999999999999999999987 666665555544444444333
No 155
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.36 E-value=6.7e-11 Score=98.89 Aligned_cols=153 Identities=13% Similarity=0.084 Sum_probs=115.3
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
.+-+++|++..+++.+........++.+.+.|.++||+|||+.-+..+++.+++++ +-..++++.++++|++.|++.+.
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSL 137 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSL 137 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHH
Confidence 44568999999999999999999999999999999999999999999999999886 45568999999999999999999
Q ss_pred hhhcHHHHH-hhc----CcchhhhHHHHHHH-HHhhhhhhHHHHHHHhhc-c--cchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 171 FISLAAPFI-DDN----APVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-H--YNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 171 ~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~--~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
.+..--++. .|+ +|++..+..++... ....+-.+++.+++.++. . .|-..+|.....+.++..+++....+
T Consensus 138 LfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 138 LFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 999888875 444 34344444444333 223333444555555555 3 34578898888877777776665545
Q ss_pred ccc
Q 023849 242 LQL 244 (276)
Q Consensus 242 ~~~ 244 (276)
|..
T Consensus 218 ENy 220 (354)
T PF05631_consen 218 ENY 220 (354)
T ss_pred ccC
Confidence 543
No 156
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.36 E-value=1.7e-11 Score=109.26 Aligned_cols=151 Identities=12% Similarity=0.023 Sum_probs=115.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC-----ChhhHHHHHHHH-HHHHHHHhhhhhHHHH-HHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-----PFRLIGVGLTVW-TLAVVGCGFSFSFWMI-AICRM 162 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g-----rr~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~r~ 162 (276)
+.+.+++|++.++++.+.+...+...+-.+ +|+++||++ ||+.++++.++. .+.....+..++.... .+..+
T Consensus 50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 128 (468)
T TIGR00788 50 PMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIF 128 (468)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 677888999999999999999999988666 999999997 788888887776 3444444444554444 44889
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHH---HHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAW---LGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
+.+++.+....+.-++..|..+ +++... .++......+|.++|+.++|.+. ..+|+..|++.+++.++..+. .+
T Consensus 129 l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~-~~ 206 (468)
T TIGR00788 129 LAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV-SN 206 (468)
T ss_pred HHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH-HH
Confidence 9999999999999999999998 554443 33444445689999999999998 779999999998877666333 34
Q ss_pred hcccc
Q 023849 239 MKPLQ 243 (276)
Q Consensus 239 ~~~~~ 243 (276)
+.+|+
T Consensus 207 ~~~E~ 211 (468)
T TIGR00788 207 LSKER 211 (468)
T ss_pred hcccc
Confidence 44553
No 157
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.36 E-value=5.3e-11 Score=100.40 Aligned_cols=128 Identities=13% Similarity=0.076 Sum_probs=105.0
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhc
Q 023849 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISL 174 (276)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 174 (276)
.+|+++.+.++..+.+..+.+++.+..+++.||+|+|+.+.++..+.+++.++....++... ..+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999998888888877766655554333 34556889999999999
Q ss_pred HHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHh
Q 023849 175 AAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGE 225 (276)
Q Consensus 175 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~ 225 (276)
..+...+..|++ .+++.++. ....+|.+++|.+.|.+. ..|.++.|++.
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~ 300 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALP 300 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHH
Confidence 999998888743 45666665 556789999999999988 67888888744
No 158
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=5e-11 Score=104.61 Aligned_cols=156 Identities=11% Similarity=-0.056 Sum_probs=121.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---hHH------HHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFW------MIAICR 161 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~~r 161 (276)
.+-++-|++..+.-+......+...+..+.+.++.||+|||+.++.+..+..+..+++.... +.. ..+++.
T Consensus 295 ~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~ 374 (485)
T KOG0569|consen 295 SIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAI 374 (485)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 66777899999999999999999999999999999999999999999999888777665442 111 123344
Q ss_pred HHHHhhhhh-hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 162 MLVGVGEAS-FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 162 ~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
++..++.+. ..|+..-+.+|++|++.|+.++++......+..++-...-..+. ..|- +.|....+++++..+..++.
T Consensus 375 ~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 375 FLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHh
Confidence 444443333 35777888999999999999999999998888887666555555 4444 78888888888888888888
Q ss_pred cccccCCC
Q 023849 240 KPLQLKGF 247 (276)
Q Consensus 240 ~~~~~~~~ 247 (276)
.||++.+.
T Consensus 454 lPETkgr~ 461 (485)
T KOG0569|consen 454 LPETKGRT 461 (485)
T ss_pred CcccCCCC
Confidence 99987543
No 159
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=7.4e-11 Score=102.75 Aligned_cols=144 Identities=12% Similarity=-0.063 Sum_probs=110.1
Q ss_pred ccccccCCCchhHHHHHHHHHH-HHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh------hhhHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF------SFSFWMIAICRML 163 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~r~l 163 (276)
.+.+|.|+++++.|++.....+ ...++.++.|++.||+|+|+.+.++..+.++..+.... .++...+.....+
T Consensus 233 ~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (390)
T TIGR02718 233 LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAF 312 (390)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHH
Confidence 3345689999999999887764 66778899999999999999998877665333222211 1233344455566
Q ss_pred HHhhhhhhhhcHHHHHhhcCcc-hhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHH
Q 023849 164 VGVGEASFISLAAPFIDDNAPV-AKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAV 234 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~ 234 (276)
.+++.+...+...+.+.+..++ +.+++.+++.+...++|..+||.++|.+. ..||+..|+..+++.++..+
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 313 GSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 6777777778788887787776 88999999999999999999999999998 78999999988776655443
No 160
>PRK10054 putative transporter; Provisional
Probab=99.35 E-value=2.3e-11 Score=106.17 Aligned_cols=143 Identities=18% Similarity=0.112 Sum_probs=117.6
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhhhhhhh
Q 023849 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFI 172 (276)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~ 172 (276)
.+.+.+....+++.+.+.+.....+++.|++.||+++|+.+.+++.+..++.....+. ++.+.+.+..++.|+|.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 3456677777888888888888888999999999999999999988888888777664 577777788899999998888
Q ss_pred hcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 173 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
+....++.+..|++.|+++++..+ ...+|..+||.++|.+. +.|....|++.+...++..++.+
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 888899999999999999988765 55689999999999998 77888888887665544444433
No 161
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.33 E-value=1.5e-11 Score=104.25 Aligned_cols=145 Identities=14% Similarity=0.112 Sum_probs=126.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
+-.+++|++..+...+.....+..+++++++|++.||+|.|+++.+++++..+.++..-+...-..+.++-.+.|...|+
T Consensus 278 fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 278 FGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcch
Confidence 33459999999999999999999999999999999999999999999999988888777777777777888899999999
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHH
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~ 235 (276)
.++.+-++.++..|+++-++.+|++......+..+||.+.+.+. ...-|..+....++..+.+++
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 99999999999999999999999999999999999999999888 556777777665554444333
No 162
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.33 E-value=8.7e-11 Score=101.16 Aligned_cols=146 Identities=14% Similarity=0.172 Sum_probs=127.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHH
Q 023849 98 LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAP 177 (276)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 177 (276)
.+....|++.+...+.-++...+..++.+|+|.|+.++++..++++-.++++++++.+.+.+.+.+.|+-.+.......-
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fk 335 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFK 335 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcchhhhHHHHHH-HHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 178 FIDDNAPVAKKTAWLGVF-YMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 178 ~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
|+++.+|++..++...+. +...++|.++.+.++|.+. +.|.+.+|++.+.+.++..++..+..+++
T Consensus 336 YI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 336 YITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999999888888874 7888999999999999999 89999999999998887777777765443
No 163
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.33 E-value=2.2e-11 Score=119.77 Aligned_cols=146 Identities=13% Similarity=0.081 Sum_probs=119.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-------------------
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS------------------- 151 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~------------------- 151 (276)
++.+.+|.+..+.|++.+.+.++.++++++.|+++++.++++.+..+.++.+++.+.+.+.
T Consensus 251 ~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (1140)
T PRK06814 251 LAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLS 330 (1140)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhc
Confidence 5566789999999999999999999999999999998887777666666665555444432
Q ss_pred -hhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHH
Q 023849 152 -FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAIL 228 (276)
Q Consensus 152 -~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~ 228 (276)
.+.+.++++.++.|++.+...+...+++.+..|++.||+++|+.++...+|..+++++.+.+. ..++...+++.++.
T Consensus 331 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 331 KRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred ccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 677788888999999999999999999999999999999999999999999999999988886 45677777666655
Q ss_pred HHHHHHHH
Q 023849 229 MFPFAVLG 236 (276)
Q Consensus 229 ~~~~~~~~ 236 (276)
.++..+..
T Consensus 411 ~~~~~~~~ 418 (1140)
T PRK06814 411 NLIVAILI 418 (1140)
T ss_pred HHHHHHHH
Confidence 44444333
No 164
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.32 E-value=1.5e-10 Score=100.64 Aligned_cols=150 Identities=14% Similarity=0.060 Sum_probs=111.8
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh-hhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-SFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~l~G~~~ 168 (276)
|++.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++..+.+++.++... .++.+..++..++.+++.
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 303 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGL 303 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 4666678999999999999999999999999999999999999999888888877765543 445556666666777765
Q ss_pred hhhhhcHHH-HHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 169 ASFISLAAP-FIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 169 ~~~~~~~~~-~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
....+.... ...+..+.+.++... .+....+|..+||.++|++. ..+|++.+.+.+++..+.......+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 554443343 344444555555543 46678899999999999987 468999999988776665555554433
No 165
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.32 E-value=1.2e-10 Score=93.75 Aligned_cols=175 Identities=19% Similarity=0.187 Sum_probs=126.3
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHH
Q 023849 44 WFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFAS 123 (276)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~ 123 (276)
...+.+++.++++++.........++. -.+++.||+|+...+.+.+......++.+++.|.
T Consensus 262 f~ppfw~~~iicv~yyva~fPFi~lg~-------------------~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~ 322 (459)
T KOG4686|consen 262 FYPPFWVLVIICVLYYVAWFPFITLGP-------------------MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGA 322 (459)
T ss_pred cCccHHHHHHHHHHHHHHHHHHhhhhH-------------------HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHH
Confidence 344455667777777666665555543 2668999999999999999988889999999999
Q ss_pred hhhccCChhhHHHHHHHHH-HHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhh
Q 023849 124 LARSVNPFRLIGVGLTVWT-LAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSG 202 (276)
Q Consensus 124 l~d~~grr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 202 (276)
++||+|++...+.+..+.. ++-.+..+ +++.=..+..+.|+............++...|.++.|++.|..+...++|
T Consensus 323 i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLg 400 (459)
T KOG4686|consen 323 ISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLG 400 (459)
T ss_pred hHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhh
Confidence 9999999987776654443 33333332 34444567778888877776667778888999999999999999999999
Q ss_pred hhHHHHHHHhhc-c---cchhHHHHHhHHHHHHHHHHHHhh
Q 023849 203 YAIGYVYGGWVG-H---YNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 203 ~~~g~~~~~~l~-~---~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
-.+-|++++++. + +.|--.|.+......+..+.+++.
T Consensus 401 la~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 401 LAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred hhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998 2 234444444333333333444443
No 166
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.31 E-value=2e-10 Score=100.21 Aligned_cols=142 Identities=11% Similarity=0.010 Sum_probs=113.4
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
|.+.+++|++..+.+++...+.++..++.++.+++.||.+++..+....+......++....++.+.+.+..++.|++.+
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~ 320 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFA 320 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999999654433443333344444555566677888888999999999
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHH
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPF 232 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~ 232 (276)
...+...+++.+..| +++++..++.....++|..+|+.++|++. ..|++..++..+.+.++.
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 999988989998887 55677888888888999999999999998 788988888876654433
No 167
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.30 E-value=1.3e-10 Score=101.07 Aligned_cols=151 Identities=17% Similarity=0.229 Sum_probs=119.6
Q ss_pred ccccccC-CCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-hhHHHHH----HHHHHH
Q 023849 91 GIQGDFD-LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIA----ICRMLV 164 (276)
Q Consensus 91 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~r~l~ 164 (276)
.+-++.| .+....+.+.++..++-++.-...+++..|+|.|+++.++.+..++-..+.+.. ++.+... +...++
T Consensus 232 ~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lh 311 (400)
T PF03825_consen 232 IYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLH 311 (400)
T ss_pred HHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhh
Confidence 3345555 677777888888888888899999999999999999999999999999988887 5544433 335679
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHH-hhhhhhHHHHHHHhhc-ccc------hhHHHHHhHHHHHHHHHHH
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMC-LPSGYAIGYVYGGWVG-HYN------WRYAFWGEAILMFPFAVLG 236 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~-~~~------w~~~~~~~~~~~~~~~~~~ 236 (276)
|+..+.....+..++.+.+|++.|+++.+++... ..+|..+|..++|++. +.| |...+.+.+.+.++..++.
T Consensus 312 G~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f 391 (400)
T PF03825_consen 312 GLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLF 391 (400)
T ss_pred hHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988764 6899999999999998 544 4455566666555555555
Q ss_pred Hhhcc
Q 023849 237 FVMKP 241 (276)
Q Consensus 237 ~~~~~ 241 (276)
.++.+
T Consensus 392 ~~~fk 396 (400)
T PF03825_consen 392 VILFK 396 (400)
T ss_pred Hhhcc
Confidence 44433
No 168
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.30 E-value=3.5e-11 Score=107.45 Aligned_cols=151 Identities=20% Similarity=0.212 Sum_probs=135.8
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC--ChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
|.+.+..+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.+.+.++++++.++..-++.|+.
T Consensus 322 ~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~ 401 (509)
T KOG2504|consen 322 PSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFC 401 (509)
T ss_pred HHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 6777899999999999999999999999999999999987 55666778888888888999999999999999999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
.|........++.|+.+.++...+.|+...+..++.++||++++++. ..+|...|+..++..++..++.++..
T Consensus 402 ~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 402 VGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999998889999999999999999999999999999999999887 44599999999998877776665543
No 169
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.30 E-value=2.4e-10 Score=99.99 Aligned_cols=144 Identities=13% Similarity=0.215 Sum_probs=104.7
Q ss_pred cccccccCCCchhHHHHHHHHH-HHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHH---hhh-hhHHHHHHHH---
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFM-VGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GFS-FSFWMIAICR--- 161 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~r--- 161 (276)
+.+.+++|+++.+.+++.+... ++..++.++.|++.||+|+|+.+.++..+.++..+.. ++. ++.+.+.+..
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 3566778999999999886654 5688999999999999999998887776665554322 343 3555555554
Q ss_pred -HHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 162 -MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 162 -~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
++.|++.+...+....++.+.+|.+.+ ++.+....+|..+++.++|.+. ..||+..|.+.++++++..++.+
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 455666677777778888888886655 4445555667776666888888 89999999998887766655543
No 170
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=3.1e-10 Score=99.00 Aligned_cols=148 Identities=11% Similarity=0.032 Sum_probs=116.5
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
++++.+|.++.+.|++.+.+.++..++++..+++.||+++|+++..+.. .++..++..+.++++...+..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 5567789999999999999999999999999999999999988887754 344444556667777777888899999888
Q ss_pred hhhcHHHHHhhcCcchh-hhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 171 FISLAAPFIDDNAPVAK-KTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
..+...+.+.+..|++. +|++.++.+...++|..++..+.+.+...|-+..+.+.+...++.+.+.+.+
T Consensus 310 ~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 310 FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888766654 7999999999999999999999887766666665555444444444444443
No 171
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.29 E-value=1.5e-10 Score=93.50 Aligned_cols=150 Identities=13% Similarity=0.108 Sum_probs=114.8
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-------hhHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-------FSFWMIAICRM 162 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~r~ 162 (276)
|.+++.+|++.+|...+.+.-.+|..+ +++.|.+.|++|++.++.+|.+...+++.+..++ .++|.+.+..+
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLF 104 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHH
Confidence 689999999999999999999999876 5889999999999999999999999999876654 36788888888
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
+.|.+.+.....+.....+.+| ++||++.|+.-....+++.+-..+...+. ...-...+.......++.++..++.++
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheec
Confidence 8888877777777777889998 68999999999999998877554444443 322333333333333344444444443
No 172
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.28 E-value=1.3e-10 Score=99.90 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=100.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc-CChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-NPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
|.+.++.|.+..+.+.+.+.+.++.++++++.|++.||+ +||+.+.++..+.+++.+++.+.++...+. ..++.|++.
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~ 299 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQ 299 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhh
Confidence 455567899999999999999999999999999999999 567777788888877777666655433322 457889999
Q ss_pred hhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 169 ASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
+...+...+.+.+..+ +++++...++.+....+|..++|.+.|++.
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 300 GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887777765554 567799999999999999999999999987
No 173
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.28 E-value=1.8e-10 Score=100.80 Aligned_cols=144 Identities=15% Similarity=0.089 Sum_probs=111.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh-ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR-SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
|.+.++.+.++.+.+++.+...++...+..+.+++.| |++.++.+..+..+.+++.++.+++++++.+.+..++.|++.
T Consensus 232 p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~ 311 (400)
T PRK11646 232 PIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGS 311 (400)
T ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4544554446778899888888777666666666665 567677778888888888888888888888888888899998
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc---ch-hHHHHHhHHHHHHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY---NW-RYAFWGEAILMFPFA 233 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~---~w-~~~~~~~~~~~~~~~ 233 (276)
+...+...+++.+..|+++||+++|+.+....+|..+||.++|++. .. +. ...++..++..++..
T Consensus 312 ~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 312 IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999999998 32 32 455555444444443
No 174
>PRK09848 glucuronide transporter; Provisional
Probab=99.26 E-value=3.2e-10 Score=100.62 Aligned_cols=124 Identities=10% Similarity=0.103 Sum_probs=100.6
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~ 168 (276)
+++..+|.+....++......++.+++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.
T Consensus 254 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~ 333 (448)
T PRK09848 254 YVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQ 333 (448)
T ss_pred eEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 44556776655445545555677888999999999999999999999998888877766643 5677777788999999
Q ss_pred hhhhhcHHHHHhhcCcch-------hhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 169 ASFISLAAPFIDDNAPVA-------KKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
+...+...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.
T Consensus 334 ~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 334 GVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988754 3589999999999999999998887764
No 175
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.26 E-value=1.1e-10 Score=102.60 Aligned_cols=139 Identities=11% Similarity=0.070 Sum_probs=95.9
Q ss_pred ccccccc--CCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhh-HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 90 TGIQGDF--DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRL-IGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 90 ~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
|.+.+++ +.+..+.+.+.+...++..++.++.|+++||+++|+. ......+..++..+....++.....++-.+.++
T Consensus 266 p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (412)
T TIGR02332 266 PQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASM 345 (412)
T ss_pred HHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 4444543 6677888999999999999999999999999997774 444444444443332222232222222223333
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc-chhHHHHHhHHH
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAIL 228 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~~~~~~~~ 228 (276)
+.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+. .. +|++.|++.++.
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 333333334445567899999999999999999999999999998888 44 599988877654
No 176
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.25 E-value=2.5e-10 Score=99.46 Aligned_cols=134 Identities=13% Similarity=0.008 Sum_probs=91.5
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
.+.+++|.+..+.+.+.+.+.++..++.++.+++.||+|||+.+.++..+..++.++..+.++.+..++.-.+.+.|.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999999999998888888777776655555555555554444
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHH
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILM 229 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~ 229 (276)
..+.. ...+..|.++|+ +.......++..+++.+++++. ..|+.......+++.
T Consensus 309 ~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 309 GFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 43332 334455544443 3333344556666666666666 556655444444433
No 177
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.25 E-value=2.7e-10 Score=101.97 Aligned_cols=124 Identities=18% Similarity=0.237 Sum_probs=108.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh----hhhHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF----SFSFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~ 166 (276)
++++.+|.++.+.+++.....++..++.++.|++.||+|||+.+.++..+.+++..+..+ ..+++.+....++.|+
T Consensus 281 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 360 (485)
T TIGR00711 281 YLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGF 360 (485)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence 455668999999999999999999999999999999999999999999888888876652 2356677777899999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
+.+...+.....+.+..|+++|+++.++.+....+|..+|+.+.+.+.
T Consensus 361 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~ 408 (485)
T TIGR00711 361 GMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTIL 408 (485)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888777788888899999999999999999999999999988876
No 178
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=2.7e-10 Score=97.36 Aligned_cols=183 Identities=13% Similarity=0.083 Sum_probs=132.3
Q ss_pred CCCChhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHH
Q 023849 43 SWFTPGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFA 122 (276)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g 122 (276)
-++++|.+++.+++..+...+.-..++. +.-+...-|| +....-|+..+|.+.++...+++-
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya~-----------------i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~m 100 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYAP-----------------INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAM 100 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeehh-----------------HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHH
Confidence 4455555555555555554433222221 1135556677 777889999999999999999999
Q ss_pred HhhhccCChhhHHHHHHHHHHHHHHHhhhh------hHH--HHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHH
Q 023849 123 SLARSVNPFRLIGVGLTVWTLAVVGCGFSF------SFW--MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGV 194 (276)
Q Consensus 123 ~l~d~~grr~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 194 (276)
|+.||+|-|..+.++....+++..+-..+. .++ ..+.+..+.+.++-.....-.-+..-|+++++|..+..+
T Consensus 101 w~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~ 180 (480)
T KOG2563|consen 101 WILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVL 180 (480)
T ss_pred HhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhH
Confidence 999999999999999999999998766553 344 667888888888777766666777889999999999999
Q ss_pred HHHHhhhhhhHHHHHHHhhc-cc------chhH--HHHHhHHHHHHHHHHHHhhcccc
Q 023849 195 FYMCLPSGYAIGYVYGGWVG-HY------NWRY--AFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 195 ~~~~~~~g~~~g~~~~~~l~-~~------~w~~--~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
-.++..+|.++|.++...+. +. .|.. .|+..+.++.+.+++..+..+++
T Consensus 181 ~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~ 238 (480)
T KOG2563|consen 181 GVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKK 238 (480)
T ss_pred HHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999988887776 32 3543 35545555444444444444443
No 179
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.25 E-value=1.1e-10 Score=98.92 Aligned_cols=148 Identities=16% Similarity=0.006 Sum_probs=115.2
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh-------hHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-------SFWMIAICRML 163 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l 163 (276)
+++++|+.++.+.|.+...+.+...+..+.+|+++||+|.+|++.+....++++..+.++.. +...+++..+.
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999998888888877766653 34444443333
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc-chhHHHHHhHHHHHHHHHHHHhh
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-NWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.++..|.....+..++...+| ++-|.+.|+....+.+|+..-|..-+... .. .+...|++...+.+++.+..+..
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333444555666666 58899999999999999998888777776 44 49999999988887777766654
No 180
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.24 E-value=1.2e-09 Score=94.69 Aligned_cols=132 Identities=16% Similarity=0.216 Sum_probs=101.3
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----FSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G 165 (276)
.+.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.+++.+. ++...+++..++.|
T Consensus 232 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 311 (385)
T TIGR00710 232 VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVG 311 (385)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 4456789999999999999999999999999999999999999988887777776655543 23445566678899
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh-hhhHHHHHHHhhc-ccchhHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG-HYNWRYAFWG 224 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~-~~~w~~~~~~ 224 (276)
++.+...+.......|..| ++|+++.++.+..... |.+.++.++ .+. ..+|...+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 312 IGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccChHHHHHHH
Confidence 9999998988888888887 6899999998877665 444455544 444 4444443333
No 181
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.23 E-value=1.9e-10 Score=102.56 Aligned_cols=148 Identities=16% Similarity=0.055 Sum_probs=101.1
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhH--------HHHHHHH--HHHHHHHhh-hhhHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLI--------GVGLTVW--TLAVVGCGF-SFSFWMIAI 159 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~--------~~~~~~~--~~~~~~~~~-~~~~~~~~~ 159 (276)
++.+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+..+. ++..+.... ..+....++
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTII 366 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 55677899999999999999999999999999999997654321 1111111 111111111 234444444
Q ss_pred HHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c---cchhHHHHHhHHHHHHHHHH
Q 023849 160 CRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H---YNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 160 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~---~~w~~~~~~~~~~~~~~~~~ 235 (276)
+-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+. . .+|+..|++.++..++..++
T Consensus 367 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 367 ILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred HHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555554455567766 58999999999999999999999999876 3 34889999888777666555
Q ss_pred HHhh
Q 023849 236 GFVM 239 (276)
Q Consensus 236 ~~~~ 239 (276)
..+.
T Consensus 446 ~~~~ 449 (465)
T TIGR00894 446 YLIF 449 (465)
T ss_pred eeee
Confidence 4443
No 182
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.23 E-value=1.1e-12 Score=117.94 Aligned_cols=152 Identities=25% Similarity=0.451 Sum_probs=3.0
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---------------
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--------------- 152 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--------------- 152 (276)
+++.++++|+++.++.|++.+.+-++..+..++..++.+|.+|-+.+-+|.++++++.+++++-+
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~ 104 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN 104 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence 44699999999999999999999999999999999999999999999999999999998876511
Q ss_pred -----------------------------------hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHH
Q 023849 153 -----------------------------------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYM 197 (276)
Q Consensus 153 -----------------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 197 (276)
-+..+++++++.|+|....++...+|+-|..++++-+..+|+...
T Consensus 105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~ 184 (539)
T PF03137_consen 105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYA 184 (539)
T ss_dssp -----------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhH
Confidence 145778899999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHHHHHhhc-c----------------------cchhHHHHHhHHHHHHHHHHHHhh
Q 023849 198 CLPSGYAIGYVYGGWVG-H----------------------YNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 198 ~~~~g~~~g~~~~~~l~-~----------------------~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
...+|.++|.++++.+. . ..|...|++.+++.++..+.++++
T Consensus 185 ~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 185 MSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp -----------------------------------------------------------------
T ss_pred HhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999988764 1 125556666666665555554444
No 183
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.22 E-value=1.8e-10 Score=103.50 Aligned_cols=124 Identities=20% Similarity=0.182 Sum_probs=109.5
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS---FSFWMIAICRMLVGVG 167 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~ 167 (276)
+++..+|.++.+.|+....+.++..+++++.|++.||+|+|+.+..+.++.+++.++..+. ++.+...+..++.|+|
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g 364 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS 364 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 5677789999999999999999999999999999999999999998988888777655432 3566667788999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.|...+.....+.+..|+++++.+.+++++...+|..+|+.+.+.+.
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888889999999999999999999999999999999888875
No 184
>PRK09669 putative symporter YagG; Provisional
Probab=99.21 E-value=3e-10 Score=100.70 Aligned_cols=153 Identities=11% Similarity=-0.014 Sum_probs=113.5
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc----cCCh-hhHHHHHHHHHHHHHHHhhhh------hHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPF-RLIGVGLTVWTLAVVGCGFSF------SFWMIA 158 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~grr-~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 158 (276)
.++.+++|++..++|.+..+..+..++..|+.|+++|| +||| +.++++....++...+....+ .+..++
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 47778899999999999999999999999999999998 7774 555567666666665444333 245666
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcC-cchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--------ccchhHHHHHhHHHH
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--------HYNWRYAFWGEAILM 229 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--------~~~w~~~~~~~~~~~ 229 (276)
+..++.+.+.........++.+|+. ++++|++..+....+..+|..+++.+...+. ..+|+..+.+.+++.
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6667777777777767778889987 5688999888888888888777765443322 247888888888877
Q ss_pred HHHHHHHHhhccc
Q 023849 230 FPFAVLGFVMKPL 242 (276)
Q Consensus 230 ~~~~~~~~~~~~~ 242 (276)
+++.+..++..+|
T Consensus 194 ~v~~~~~~~~~~e 206 (444)
T PRK09669 194 VVLFFCCFFMTKE 206 (444)
T ss_pred HHHHHHHhCCeEE
Confidence 6666655555444
No 185
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.19 E-value=1e-10 Score=97.39 Aligned_cols=130 Identities=7% Similarity=-0.017 Sum_probs=97.2
Q ss_pred HHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhh
Q 023849 109 AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKK 188 (276)
Q Consensus 109 ~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 188 (276)
+..+.-+.|.++.+++.||+|||+.+..++++++++.++...+.+-....+.-+..-++..+.+.+.+.|..|.+|.+-|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhh
Confidence 33456778999999999999999999999999999988777766433333333333444556667788899999999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 189 TAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 189 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+...|.......+|+++.|.++ ...+..-..+..+.+...++..+...++
T Consensus 469 atgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHH-HHhccceeehHHHHHHHHHHHHHHheee
Confidence 9999999999999999999998 2223333445555555555555555554
No 186
>PRK10133 L-fucose transporter; Provisional
Probab=99.18 E-value=1.5e-09 Score=96.12 Aligned_cols=133 Identities=11% Similarity=-0.094 Sum_probs=108.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFI 172 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 172 (276)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++.++.++.++..++..+.++.. .+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999998888777766666655532 3456778999999999
Q ss_pred hcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc-hhHHHHHhHHH
Q 023849 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN-WRYAFWGEAIL 228 (276)
Q Consensus 173 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~-w~~~~~~~~~~ 228 (276)
|...+...+..|+ +.+.+.++..+ ..+|..++|.+.|.+. ..| -+..|++..+.
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 9999999999874 46677777764 4467888888888887 666 77777765443
No 187
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.16 E-value=1.2e-09 Score=94.49 Aligned_cols=143 Identities=9% Similarity=-0.047 Sum_probs=98.9
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCC---hhhHHH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP---FRLIGV-GLTVWTLAVVGCGFSFSFWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr---r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 165 (276)
|.+.++.|.+.. .+...++..+...++ .++++||.+| |+.... ..++.++......+..+....++.-.+.|
T Consensus 216 p~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~ 291 (368)
T TIGR00903 216 EAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAG 291 (368)
T ss_pred HHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 455566777754 555555555555554 4677777654 333332 34444444444455555555555666777
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
++....++...++.+|.+|++.|+++.|+.+...++|++++|++.+.+.. +-+..|.+.++..++..+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 292 LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 77777778788899999999999999999999999999999988876653 677788888877777666654
No 188
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.15 E-value=7.9e-10 Score=95.03 Aligned_cols=110 Identities=10% Similarity=-0.001 Sum_probs=92.8
Q ss_pred ccccccCCCchhHHHHHHHHH-HHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-----------hhHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFM-VGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-----------FSFWMIA 158 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 158 (276)
.+.+++|++..+.+.+.+++. ++..++.+++|++.||+|||+.+.++.++.++...+..+. ++.+.+.
T Consensus 234 ~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (356)
T TIGR00901 234 LFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLF 313 (356)
T ss_pred HHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHH
Confidence 444558999999998887766 5778999999999999999999998888887766655443 3457778
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhh
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLP 200 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 200 (276)
.+.++.+++.+...+...+++.|.+|+++||+.+|+.+...+
T Consensus 314 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 314 LTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 888999999999999999999999999999999999887654
No 189
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.14 E-value=4.3e-10 Score=95.99 Aligned_cols=116 Identities=20% Similarity=0.220 Sum_probs=102.2
Q ss_pred cccccCCC-chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHhh
Q 023849 92 IQGDFDLN-NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMIAICRMLVGVG 167 (276)
Q Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~ 167 (276)
+.+++|.+ ..+.+++.+...++..++.++.|++.||+++|+...+......+..+...+.. +....++..++.|++
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 312 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFG 312 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 48889999 78999999999999999999999999999998888877777776666555443 457777788899999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHH
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (276)
.+...+....++.+.+|+++||++.|+.+...++|..+||
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 313 FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999987
No 190
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.14 E-value=5.2e-09 Score=93.60 Aligned_cols=124 Identities=18% Similarity=0.054 Sum_probs=96.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-----SFSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~l~G 165 (276)
++.+...-+....+++.+...++.+++.++++++.||+|+|+.+.++.++.+++.+...+ .++.+.+++.-++.|
T Consensus 256 y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g 335 (473)
T PRK10429 256 YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLN 335 (473)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 444433335556777777777889999999999999999999999888776665554332 345677777888899
Q ss_pred hhhhhhhhcHHHHHhhcCc-------chhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 166 VGEASFISLAAPFIDDNAP-------VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
++.+...+...++++|..| .++.|..++......-+|..+++.+.|++.
T Consensus 336 ~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 336 IGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999966 233466889999999999999998888765
No 191
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.13 E-value=2.8e-09 Score=95.29 Aligned_cols=139 Identities=17% Similarity=0.220 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHhHHHHh----hhc-cCChhhH--HHHHHHHHHHHHHHhh---------hhhHHHHHHHHHHHHh
Q 023849 103 DGVLSSAFMVGLLVASPIFASL----ARS-VNPFRLI--GVGLTVWTLAVVGCGF---------SFSFWMIAICRMLVGV 166 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l----~d~-~grr~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~ 166 (276)
.+++.+++.+..++.+++..++ .+| .+++... .+|.++.+++.+..++ ..+++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 6788999999998888886654 443 3333433 7788888888877764 4589999999999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
|.....|...+++.+..|++.||+++|++.....+|..+++.+..... ..+|.+.|...++..++..++.+++.|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998888776 668998888888887777776666544
No 192
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.12 E-value=1.8e-09 Score=96.37 Aligned_cols=125 Identities=10% Similarity=-0.016 Sum_probs=108.5
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh----------hhHHHHHHHHH
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS----------FSFWMIAICRM 162 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~ 162 (276)
.+.+|.++.+.|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.+....+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 35789999999999999999999999999999999999999999999998877554211 33344556678
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN 217 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~ 217 (276)
+.+++.+........++.+.+|++.+|+..++.+...++|..+++.+++.+. ..|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999999999999999999999999887 444
No 193
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.11 E-value=9.8e-09 Score=85.71 Aligned_cols=149 Identities=21% Similarity=0.174 Sum_probs=124.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
|.+..|.|+|..+.|++.+...+.....++....+.+| -.+|+..+....++.++.+.+.+.+....+.- .++.|+|.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~ 310 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQ 310 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCcc
Confidence 78889999999999999999999999999999999996 46788888888899999988888774333322 59999999
Q ss_pred hhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 169 ASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
|..++.+..++.+..+ +++-+...++.|..+.+=..+||.+.|++- ..+|+..++......+...+..+..
T Consensus 311 G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 311 GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999988775 456677777888888888888999999998 7789999988888776666665554
No 194
>PRK11043 putative transporter; Provisional
Probab=99.10 E-value=1.2e-08 Score=89.17 Aligned_cols=124 Identities=8% Similarity=-0.033 Sum_probs=96.8
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHH---hh--hhhHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC---GF--SFSFWMIAICRMLV 164 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~r~l~ 164 (276)
|.+.+++|.+..+.++....+.++..++.++.+++.||+|+|+.+.......+++.+.. .+ .++.+.+++...+.
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVM 306 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 45566789999999998888889999999999999999999987766555444433322 22 23555566667788
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
|++.+..++.......+..| +++|++.++.+.....+..+++.+.+.+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 307 AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88889988888888777776 68999999999988888888888877776
No 195
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.09 E-value=9.2e-09 Score=90.62 Aligned_cols=133 Identities=10% Similarity=-0.159 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHH-hhh-----hhHHHHHHHHHHHHhhhhhhhhcHHHHHh
Q 023849 107 SSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGC-GFS-----FSFWMIAICRMLVGVGEASFISLAAPFID 180 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 180 (276)
..+..+...+..+++|+++||+|+|+++.++....++..... ... .+++.+.+..+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 444567788899999999999999999998888776665321 122 24666666555544555555555566666
Q ss_pred hcCcc---------------------hhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHH
Q 023849 181 DNAPV---------------------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 181 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
+.+|. ++-|.+.|+......+|+.+-|.+-+... ..++...|+...+..+++.++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 66663 25788999999999999999997766555 56688889998888888877776
Q ss_pred hh
Q 023849 238 VM 239 (276)
Q Consensus 238 ~~ 239 (276)
..
T Consensus 452 ~~ 453 (462)
T PRK15034 452 LV 453 (462)
T ss_pred HH
Confidence 65
No 196
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=1.4e-08 Score=87.80 Aligned_cols=121 Identities=15% Similarity=0.072 Sum_probs=87.0
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHH---Hhhh-hhHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG---CGFS-FSFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~r~l~G~ 166 (276)
.+.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++.++..+..+. .... .+++.+.++..+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 455678999999999999999999999999999999999999998887765443322 2222 244555555555555
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHH-hhhhhhHHHHHHHh
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMC-LPSGYAIGYVYGGW 212 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~ 212 (276)
+.+........++.|..| ++++++.++.+.. ..+|..+++++++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 556666666677778776 8899999887654 34666666666543
No 197
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.08 E-value=7.4e-10 Score=100.70 Aligned_cols=153 Identities=24% Similarity=0.420 Sum_probs=132.6
Q ss_pred CccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---------------
Q 023849 88 PGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--------------- 152 (276)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--------------- 152 (276)
.+..+++.|+++.++.|++.+.+-++..+...+..++.-|..|-+.+-+|+++++++.+++++-+
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 34699999999999999999999999999999999999999999999999999999999887620
Q ss_pred ----------------------------------h--H-HHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHH
Q 023849 153 ----------------------------------S--F-WMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVF 195 (276)
Q Consensus 153 ----------------------------------~--~-~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 195 (276)
+ + ..++++.++.|+|....++...+|+-|...+++-+..+|+.
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~ 278 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGIL 278 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHH
Confidence 0 2 25677899999999999999999999999999999999999
Q ss_pred HHHhhhhhhHHHHHHHhhc----cc----------------chhHHHHHhHHHHHHHHHHHHhhc
Q 023849 196 YMCLPSGYAIGYVYGGWVG----HY----------------NWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 196 ~~~~~~g~~~g~~~~~~l~----~~----------------~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
.....+|.++|.++++++. .. .|...|++.+++.++..+.++++.
T Consensus 279 ~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP 343 (735)
T KOG3626|consen 279 YSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP 343 (735)
T ss_pred HHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 9999999999999999875 11 266777777777766666666553
No 198
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.07 E-value=4.5e-09 Score=94.01 Aligned_cols=154 Identities=6% Similarity=-0.072 Sum_probs=111.5
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh----ccCC-hhhHHHHHHHHHHHHHHHhhhh------hHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR----SVNP-FRLIGVGLTVWTLAVVGCGFSF------SFWMIA 158 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~gr-r~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 158 (276)
.++.+.+|++...+|.+..+.-+.-++..|+.|+++| |+|| |+.++++....+++..++...+ .+..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 3667788999999999999999999999999999999 5698 5566677777777765554322 234555
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcC-cchhhhHHHHHHHHHhhhhhhHHHHHHHhh----c----ccchhHHHHHhHHHH
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNA-PVAKKTAWLGVFYMCLPSGYAIGYVYGGWV----G----HYNWRYAFWGEAILM 229 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l----~----~~~w~~~~~~~~~~~ 229 (276)
+..++.+++.........+++.|+. ++++|.+..+.-..+.++|..+.+.+...+ . ..+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6667778888888888888999998 689999999887777777765554443322 1 235777777777766
Q ss_pred HHHHHHHHhhcccc
Q 023849 230 FPFAVLGFVMKPLQ 243 (276)
Q Consensus 230 ~~~~~~~~~~~~~~ 243 (276)
++..+..++..+|.
T Consensus 191 ~~~~~~~~~~~~e~ 204 (473)
T PRK10429 191 IVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHcCceec
Confidence 65555555544543
No 199
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.07 E-value=4.5e-09 Score=92.76 Aligned_cols=121 Identities=17% Similarity=0.244 Sum_probs=106.1
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~ 170 (276)
+...|.+ ...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++..++.|++.+.
T Consensus 253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~ 331 (428)
T PF13347_consen 253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGA 331 (428)
T ss_pred HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcc
Confidence 3334544 5678888899999999999999999999999999999999999999888886 999999999999999999
Q ss_pred hhhcHHHHHhhcCcc-------hhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 171 FISLAAPFIDDNAPV-------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.++...++++|..+. ++.|...++......+|..+++.+.+.+.
T Consensus 332 ~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 332 FFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred cccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999873 33588999999999999999988877664
No 200
>PRK09669 putative symporter YagG; Provisional
Probab=99.07 E-value=1.3e-08 Score=90.25 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=90.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHhhhhhhhhcHHH
Q 023849 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF--SFSFWMIAICRMLVGVGEASFISLAAP 177 (276)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~ 177 (276)
+...+.+.....+..+++.++++++.||+|+|+.+.++.++.++..+...+ .++.+.+++..++.|++.+...+...+
T Consensus 263 ~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~a 342 (444)
T PRK09669 263 PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWS 342 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455666677788889999999999999999999887766643332222 357777888889999999999999999
Q ss_pred HHhhcCcc-------hhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 178 FIDDNAPV-------AKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 178 ~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
+++|..+. +..|..++....+..+|..+|+.+++.+.
T Consensus 343 m~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 343 MFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred HHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998862 23467788999999999999999888775
No 201
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.06 E-value=5.9e-10 Score=98.38 Aligned_cols=153 Identities=12% Similarity=0.042 Sum_probs=121.4
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh----ccCChhh-HHHHHHHHHHHHHHHhhh-h-------hHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR----SVNPFRL-IGVGLTVWTLAVVGCGFS-F-------SFWM 156 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d----~~grr~~-~~~~~~~~~~~~~~~~~~-~-------~~~~ 156 (276)
+++.+..|+++...|.+..+..+..++..|+.|.++| |+|||+. +.+|....+++.+++... + ....
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 4677888999999999999999999999999999999 7997665 456777778877766655 3 2334
Q ss_pred HHHHHHHHHhhhhhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc------c--cchhHHHHHhHH
Q 023849 157 IAICRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG------H--YNWRYAFWGEAI 227 (276)
Q Consensus 157 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------~--~~w~~~~~~~~~ 227 (276)
+.+..++..++.........++..|..+ +++|.+..+.-..+..+|..+...+.+.+. . .+|++..++.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 5677777788888888888999999997 578999999998888888865555444433 1 179999999999
Q ss_pred HHHHHHHHHHhhccc
Q 023849 228 LMFPFAVLGFVMKPL 242 (276)
Q Consensus 228 ~~~~~~~~~~~~~~~ 242 (276)
+.++..++..+..+|
T Consensus 186 v~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 186 VGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHhhhhhheeee
Confidence 888877777777666
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.06 E-value=1.3e-09 Score=94.02 Aligned_cols=152 Identities=16% Similarity=0.171 Sum_probs=98.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHH---HHHHHHhhhh----hHH-HHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWT---LAVVGCGFSF----SFW-MIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~---~~~~~~~~~~----~~~-~~~~~r~ 162 (276)
++.++.|++.+++|.+.++..+...+.+++.|.+.||+|.|+-+++...+.. ...+...+.+ |.+ ..+++-+
T Consensus 33 WL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i 112 (412)
T PF01306_consen 33 WLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGI 112 (412)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTT
T ss_pred HHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556689999999999999999999999999999999997776654443322 2222223322 322 2233334
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
..|++.....++.-+++.+.. ++.+.-.|-.-+.+++|.+++..++|.+.+.+-...||+..+.+++..++.++.+|+
T Consensus 113 ~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 113 YLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp TTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred HHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 445555555566666665553 445566777888899999999999999886677788888777666666665556655
Q ss_pred cc
Q 023849 243 QL 244 (276)
Q Consensus 243 ~~ 244 (276)
.+
T Consensus 191 ~~ 192 (412)
T PF01306_consen 191 VP 192 (412)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 203
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.04 E-value=7.2e-09 Score=85.89 Aligned_cols=143 Identities=21% Similarity=0.383 Sum_probs=117.0
Q ss_pred cccccccCCCc--hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNN--FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS--FWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~r~l~G 165 (276)
+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.+++.+..+ .+.+++.|++.|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 105 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 45555665554 47899999999999999999999999999998888888766666666666665 899999999999
Q ss_pred hhhhhhhhcHHHHHhhcCcc-hhhhHHHHHHHH-HhhhhhhHHHHHHHhhcc---cchhHHHHHhHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPV-AKKTAWLGVFYM-CLPSGYAIGYVYGGWVGH---YNWRYAFWGEAILMFPF 232 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~---~~w~~~~~~~~~~~~~~ 232 (276)
++.+...+....++.+++|+ ++|+...+.... ...+|..++|.+++.+.. .+||+.|..........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999999999999998 688999998888 588888889888777763 58999777766655433
No 204
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.03 E-value=2.8e-09 Score=92.92 Aligned_cols=148 Identities=17% Similarity=0.179 Sum_probs=129.6
Q ss_pred cccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhh
Q 023849 92 IQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASF 171 (276)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~ 171 (276)
-.++.+-.+...|........+-++.-++.+++.+|+|+-+++..++.+..+-++..++.+|.|+.+...+++|+..+..
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~ali 476 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALI 476 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHH
Confidence 34666666666787777777778888899999999999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHhhcCcchhhhHHHHHHH-HHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 172 ISLAAPFIDDNAPVAKKTAWLGVFY-MCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 172 ~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+.++.+|++...||+-|.++.++.+ ....+|--+|.+++|.+. .++-|..|...++.+++.+++....
T Consensus 477 Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 477 WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999775 556889999999999999 8888999999888776666555443
No 205
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.00 E-value=2.1e-08 Score=90.26 Aligned_cols=139 Identities=13% Similarity=0.136 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHhHH----HHhhhccCChhhHHHHHHHHHHHHHHHhhhhh---------HHHHHHHHHHHHhhhh
Q 023849 103 DGVLSSAFMVGLLVASPIF----ASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS---------FWMIAICRMLVGVGEA 169 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~----g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~~ 169 (276)
.+++.++..+...+..++. +++.+|++..+.+.+|.++.+++.+...+..+ .+++++..++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777777776766666 56666666778889999999999888777655 4678889999999999
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-----------ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-----------HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
...|...+++.+..|++.||+++|++.....+|..++..+..... ..+..+.|...++.++++.++.++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888888887666654221 124678888888777666655555
Q ss_pred hcc
Q 023849 239 MKP 241 (276)
Q Consensus 239 ~~~ 241 (276)
..|
T Consensus 478 ~~~ 480 (500)
T PRK09584 478 TAP 480 (500)
T ss_pred HHH
Confidence 443
No 206
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.99 E-value=1.8e-08 Score=87.81 Aligned_cols=152 Identities=18% Similarity=0.225 Sum_probs=107.8
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC-ChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g-rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
+.+-++.|++..|+|.+.+...+..+++++++|+++||++ +|+++.+..++.++........++++.+++..++..+..
T Consensus 26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 105 (400)
T PF03825_consen 26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFF 105 (400)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4566778899999999999999999999999999999985 677787878887777777778889998888888888888
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHH-HHhhc-cc---chhHHHHHhHHHHHHHHHHHHhhcccc
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVY-GGWVG-HY---NWRYAFWGEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~-~~---~w~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (276)
....|...++..+... +++.-.|-.-..+++|-+++... ++.+. .. +..+.+++.++..++.....+ ..|+.
T Consensus 106 ~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l-~lp~~ 182 (400)
T PF03825_consen 106 SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL-FLPKT 182 (400)
T ss_pred ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 8888888888888775 33444555566666676665433 22222 22 223455555554433333322 34554
Q ss_pred c
Q 023849 244 L 244 (276)
Q Consensus 244 ~ 244 (276)
+
T Consensus 183 ~ 183 (400)
T PF03825_consen 183 P 183 (400)
T ss_pred c
Confidence 4
No 207
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.93 E-value=4.5e-09 Score=88.59 Aligned_cols=149 Identities=14% Similarity=0.114 Sum_probs=121.9
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC--ChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 168 (276)
...+.+..+..+.|+..--..+.++++..+.|.++||++ |-.....++++..+......+++++.++++-++..|++.
T Consensus 296 wm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i 375 (464)
T KOG3764|consen 296 WMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGI 375 (464)
T ss_pred HHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHH
Confidence 355667766668888888889999999999999999999 544445555666666667778999999999999999988
Q ss_pred hhhhhcHHHHHhhcCcchh------hhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 169 ASFISLAAPFIDDNAPVAK------KTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+...+..........+.++ -|...++...++.+|.++||.++|.+. ..|++|.-.+.++..++-..+..++
T Consensus 376 ~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 376 GLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777766666665443 468899999999999999999999999 9999999999999988877766655
No 208
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.90 E-value=6.5e-08 Score=89.02 Aligned_cols=149 Identities=16% Similarity=0.144 Sum_probs=121.7
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhh--------hHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSF--------SFWMIAICR 161 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~r 161 (276)
++.+.+|++......+...+....-+..+++|+++|+ +|+++.+.++.++..++..+.++.. .....+++-
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence 5566788888888888888888888999999999995 7999999999999999988777642 123466777
Q ss_pred HHHHhhhhhhhhcHHHHHhhcCcch---hhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc-------chhHHHHHhHHHHH
Q 023849 162 MLVGVGEASFISLAAPFIDDNAPVA---KKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY-------NWRYAFWGEAILMF 230 (276)
Q Consensus 162 ~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~-------~w~~~~~~~~~~~~ 230 (276)
.+..+|.|+.-+...+...|.++++ +|-..+.++..+.++|+.+++++.+++. .. +|...|.+.++..+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 8888999999999999999999754 4677888999999999999998888886 32 69999999888777
Q ss_pred HHHHHHHhh
Q 023849 231 PFAVLGFVM 239 (276)
Q Consensus 231 ~~~~~~~~~ 239 (276)
+.+++....
T Consensus 173 ia~lvf~~g 181 (654)
T TIGR00926 173 LALIVFMAG 181 (654)
T ss_pred HHHHHHHHh
Confidence 666655443
No 209
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.89 E-value=2.1e-07 Score=81.21 Aligned_cols=123 Identities=10% Similarity=0.026 Sum_probs=94.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHH-HHHHHHHHHHhh--hhhHHHHHHHHHHHHhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGL-TVWTLAVVGCGF--SFSFWMIAICRMLVGVG 167 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~ 167 (276)
.+.+.+|.+..+.+++.....++..+++++.+++.||++++....... .+..+....... ..+.+.+.+..++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 445558999999999999999999999999999999998433322222 222222222222 23566777888999999
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.+...+...+++.|.+| ++++...++.+....+|..+++.+++.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999887 67899999999999999999999998887
No 210
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.88 E-value=4.3e-08 Score=87.89 Aligned_cols=139 Identities=18% Similarity=0.276 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCChhh-------HHHHHHHHHHHHHHH-----hhh-----hhHHHHHHHHHHHH
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRL-------IGVGLTVWTLAVVGC-----GFS-----FSFWMIAICRMLVG 165 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~-------~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~r~l~G 165 (276)
.+++.+.+.+..++.+++.+++.||+++|+. +.+|.++.+++.+.. .++ .+.+.++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4666777778888899999999999999874 677777777665432 121 25777888899999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--c---------cchhHHHHHhHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--H---------YNWRYAFWGEAILMFPFAV 234 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~---------~~w~~~~~~~~~~~~~~~~ 234 (276)
+|.+...+...+++.+..|++.++.++|++.....+|..+|..++.... . ....+.|...++..+++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988876553 1 1256777777777776666
Q ss_pred HHHhhcc
Q 023849 235 LGFVMKP 241 (276)
Q Consensus 235 ~~~~~~~ 241 (276)
+.++..|
T Consensus 471 ~~~~~~~ 477 (489)
T PRK10207 471 VMALMVP 477 (489)
T ss_pred HHHHHHH
Confidence 6665544
No 211
>PRK11462 putative transporter; Provisional
Probab=98.88 E-value=1.2e-07 Score=84.53 Aligned_cols=115 Identities=13% Similarity=0.088 Sum_probs=80.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhhhhhhhcHHH
Q 023849 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGEASFISLAAP 177 (276)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~ 177 (276)
+...+.+...+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+ +...+++.-++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456677788888999999999999999999988766554444333333322 2334455556778887777777777
Q ss_pred HHhhcCc-------chhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 178 FIDDNAP-------VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 178 ~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
+++|..+ .+.-|..++.......+|..+++.+++.+.
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887776 333456667777888888888888777665
No 212
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.5e-08 Score=88.32 Aligned_cols=145 Identities=12% Similarity=0.109 Sum_probs=103.5
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCC---------hhhHHHHHHHHHHHHHHHhhhhh--H----
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP---------FRLIGVGLTVWTLAVVGCGFSFS--F---- 154 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr---------r~~~~~~~~~~~~~~~~~~~~~~--~---- 154 (276)
.++.+.+|++..+.|++.++..+...+..+++|+++||.-+ |..=.++....+++.+..++.++ .
T Consensus 283 tY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~ 362 (466)
T KOG2532|consen 283 TYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAV 362 (466)
T ss_pred HHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHH
Confidence 47788899999999999999999999999999999998755 22223555555666666666652 1
Q ss_pred HHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc---chhHHHHHhHHHHH
Q 023849 155 WMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY---NWRYAFWGEAILMF 230 (276)
Q Consensus 155 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~---~w~~~~~~~~~~~~ 230 (276)
..+.+...+.|+..++.+ .-..+. .++.-+..+|+.+....+..+++|.+.+.+. +. .|+++|++.+++.+
T Consensus 363 ~~l~~~~~~~g~~~~Gf~----~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~ 437 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGFY----KNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILI 437 (466)
T ss_pred HHHHHHHHHcccchhhhH----hhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHH
Confidence 111122222333222221 112222 4588899999999999999999999999988 43 79999999999887
Q ss_pred HHHHHHHhh
Q 023849 231 PFAVLGFVM 239 (276)
Q Consensus 231 ~~~~~~~~~ 239 (276)
+..++..++
T Consensus 438 ~~~i~f~~f 446 (466)
T KOG2532|consen 438 VGNIIFLFF 446 (466)
T ss_pred HhchheeEe
Confidence 777555444
No 213
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.87 E-value=2.4e-07 Score=79.09 Aligned_cols=146 Identities=18% Similarity=0.176 Sum_probs=122.2
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh-ccCChhhHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR-SVNPFRLIGVGLTVWTLAVVGCG---FSFSFWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d-~~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G 165 (276)
|+=.+.||++..+...++.....|..++....|++.. |.++++.-.+++...+++..+.. ...+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 6667889999999999999999999999999998877 68888888899888887776544 4457889999999999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-----------ccchhHHHHHhHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-----------HYNWRYAFWGEAILMFPFAV 234 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------~~~w~~~~~~~~~~~~~~~~ 234 (276)
++.|.......+.+.+...+++.|..+|.++....++..++..+++.+. ..+|..+|.+.++..++..+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988888887764 12466677777665544443
Q ss_pred H
Q 023849 235 L 235 (276)
Q Consensus 235 ~ 235 (276)
+
T Consensus 393 l 393 (403)
T PF03209_consen 393 L 393 (403)
T ss_pred H
Confidence 3
No 214
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=1.3e-07 Score=83.60 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=110.3
Q ss_pred HHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhh
Q 023849 110 FMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKT 189 (276)
Q Consensus 110 ~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 189 (276)
..+...+.++..|.++|++|||..+.+......+..+...+.. +|.++ .--+.|. .+.......++++|....++|.
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~-~~~l~g~-~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL-LLGLSGG-FSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh-hcccccc-hhhhhhhhhhheeeccchhHHH
Confidence 3677789999999999999999999999999888887776665 33333 2222222 2456677889999999999999
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhhcccccCCC
Q 023849 190 AWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGF 247 (276)
Q Consensus 190 ~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (276)
..+|+.......+..++|.+++.+. ..|.-.+|.+..+..++..+..++..||+..+.
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 9999999999999999999999999 888999999999988888888888888765543
No 215
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.84 E-value=1.4e-07 Score=82.82 Aligned_cols=126 Identities=11% Similarity=-0.036 Sum_probs=97.7
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHH
Q 023849 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (276)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 176 (276)
+.+....+...+.+..+..++.++.+++.||+++|+++.++..+.++..++..+.++... ...-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 344444555677777888999999999999999999999999888888888877766444 5667788888999999999
Q ss_pred HHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-cc------chhHHHHHh
Q 023849 177 PFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HY------NWRYAFWGE 225 (276)
Q Consensus 177 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~------~w~~~~~~~ 225 (276)
++..+..+++.+....++... .+|..+.|.+.|++. .. +.+..|++.
T Consensus 344 sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~ 397 (410)
T TIGR00885 344 GIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILP 397 (410)
T ss_pred HHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHH
Confidence 999999986655434444443 389999999999998 32 477777764
No 216
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.80 E-value=2.3e-08 Score=86.12 Aligned_cols=111 Identities=10% Similarity=-0.038 Sum_probs=85.0
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh--hh--hHHHHHHHHHHHHh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF--SF--SFWMIAICRMLVGV 166 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~r~l~G~ 166 (276)
++++.+|.+..+.+++.+.+.++..++.++.|++.||+|+|+.+..+..+.+.+..+..+ .. +.+.+.+...+.++
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFF 330 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHH
Confidence 556678999999999999999999999999999999999998887777666655544433 22 55555555555555
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhh
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSG 202 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 202 (276)
+.|........++.+..| +++|+++|+.+...++|
T Consensus 331 ~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 331 FSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred Hhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 556555666677788877 79999999999888776
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.80 E-value=3.3e-07 Score=80.17 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=100.7
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF--SFWMIAICRMLVGVGE 168 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~ 168 (276)
+.+-..|-++....+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++.-+.+ +.+.+++..++.++|.
T Consensus 262 y~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~ 341 (467)
T COG2211 262 YVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGT 341 (467)
T ss_pred eEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHh
Confidence 33444566666667778888888888899999999999999999999999999998887776 7888889999999999
Q ss_pred hhhhhcHHHHHhhcCcch-------hhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 169 ASFISLAAPFIDDNAPVA-------KKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
+...+...++++|..+-. +-|...+....+.=+|.+++..+.+++.
T Consensus 342 ~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 342 GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998877532 2377778888888888888776665553
No 218
>PRK11462 putative transporter; Provisional
Probab=98.80 E-value=2.2e-07 Score=82.81 Aligned_cols=153 Identities=10% Similarity=-0.028 Sum_probs=114.3
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc----cCChhh-HHHHHHHHHHHHHHHhhhhh------HHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFRL-IGVGLTVWTLAVVGCGFSFS------FWMIAI 159 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~grr~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~ 159 (276)
++.+..|+++..+|.+..+.-+--++.-|+.|+++|| +||||. ++++....+++..++-..++ ...+.+
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 5667889999999999999999999999999999996 687654 45666667766655543332 445566
Q ss_pred HHHHHHhhhhhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-------cchhHHHHHhHHHHH
Q 023849 160 CRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H-------YNWRYAFWGEAILMF 230 (276)
Q Consensus 160 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~-------~~w~~~~~~~~~~~~ 230 (276)
..++..++.......-.++..|+.+ +++|++..++...+..+|..+++.+...+. . .+|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 6677788888888888888899887 789999999999999998887766654332 1 367877777777766
Q ss_pred HHHHHHHhhcccc
Q 023849 231 PFAVLGFVMKPLQ 243 (276)
Q Consensus 231 ~~~~~~~~~~~~~ 243 (276)
++.++.++..+|+
T Consensus 195 i~~~i~~~~~kE~ 207 (460)
T PRK11462 195 MMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHhcceec
Confidence 6655555444443
No 219
>PRK09848 glucuronide transporter; Provisional
Probab=98.79 E-value=2.2e-07 Score=82.54 Aligned_cols=124 Identities=11% Similarity=-0.043 Sum_probs=84.2
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc----CChhhH-HHHHHHHHHHHHH-Hhh----hh--hHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV----NPFRLI-GVGLTVWTLAVVG-CGF----SF--SFWMI 157 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~----grr~~~-~~~~~~~~~~~~~-~~~----~~--~~~~~ 157 (276)
.++.+.+|++..++|.+.+...+..++..++.|+++||. |||+.. .++.+...+..++ ... .+ ....+
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 477788899999999999999999999999999999996 666644 5555544433333 221 11 22334
Q ss_pred HHHHHHHHhhhhhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhh-----hhhhHHHHHHHhh
Q 023849 158 AICRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLP-----SGYAIGYVYGGWV 213 (276)
Q Consensus 158 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g~~~~~~l 213 (276)
++..++.+++.+...+...++..+..+ +++|.+..++-..+.+ ++..++|.+++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455667788888887777777676554 4678887666554333 4455566665543
No 220
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=4.3e-10 Score=90.67 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=104.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCG---FSFSFWMIAICRMLVG 165 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G 165 (276)
.++..+.+++.++.-++.++|....++.+.+.|++.|| +|-|..-++-+.+..++-++.+ ..+.+|.+.++|++.|
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG 147 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG 147 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeec
Confidence 46677778888888999999999999999999999996 7888877776666666666544 4679999999999999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
+|.-....+...++.-|+.-|+.+.++|+......+|..+--.+.+++
T Consensus 148 IGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 148 IGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred cCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 998888888899999999999999999999999999987755444444
No 221
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.78 E-value=1.2e-08 Score=67.60 Aligned_cols=74 Identities=30% Similarity=0.385 Sum_probs=68.5
Q ss_pred CCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHH
Q 023849 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIA 158 (276)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (276)
++|.+|.+++|.++|.++.+++.+.+.+||.+|++...++.++..+++.+..+++...+..+.+++.++.+.+.
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 45788999999999999999999999999999999999999998889999999999999999999998877653
No 222
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.78 E-value=2.1e-07 Score=84.20 Aligned_cols=109 Identities=17% Similarity=0.044 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhccCC-hhhHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHhhhhhhhhcHHHH
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGEASFISLAAPF 178 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~ 178 (276)
..++....+.++..+++.+.|.+..+++| |+.++++.+++.+++.+++.. +|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 56888888999999999999999988776 556667777776655444433 466666788899999999988888888
Q ss_pred HhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH
Q 023849 179 IDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (276)
Q Consensus 179 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (276)
+.-.+|.+..|.+.++......+|+.+|..+.
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 88888999999999999999999998886654
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.7e-07 Score=79.52 Aligned_cols=137 Identities=16% Similarity=0.137 Sum_probs=112.0
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
++.+..|.+..+.+...+.+..+.++|.++..++..|+...+.+.+..++..+.++..++.++... +.+-++.|+..+.
T Consensus 262 y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~ig~F~si 340 (422)
T COG0738 262 YLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLIGLFNSI 340 (422)
T ss_pred HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHHHHHhHH
Confidence 444558999999999999999999999999999999999999999999988888888888888444 4455678999999
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHH
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMF 230 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~ 230 (276)
.+|...++..+..| +.....|..-....+|+++-|.+.|++. ..|-...+.....++.
T Consensus 341 mfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~ 399 (422)
T COG0738 341 MFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCY 399 (422)
T ss_pred HHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999998 3444455555666789999999999999 7777777664444443
No 224
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.73 E-value=1.7e-07 Score=82.71 Aligned_cols=152 Identities=14% Similarity=0.096 Sum_probs=122.1
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhcc-----CChhhHHHHHHHHHHHHHHHhhhh----hHHHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSV-----NPFRLIGVGLTVWTLAVVGCGFSF----SFWMIAIC 160 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-----grr~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 160 (276)
+.+.+++|+++.+...+.+...+.- ...++.|.++|.+ .||+.++++.++.+++.+.++..+ +.....+.
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 6889999999999988888777666 4567899999976 367777788887766666555433 56666777
Q ss_pred HHHHHhhhhhhhhcHHHHHhhcCc--chhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 161 RMLVGVGEASFISLAAPFIDDNAP--VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 161 r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
.++..+|......++-+++.|... ++.||...+.......+|.+++..++|.+. ..++++.|.+.+++..+..+..+
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~ 172 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH
Confidence 788889999999999999999873 344888899999999999999999999988 88999999998888777776666
Q ss_pred hhccc
Q 023849 238 VMKPL 242 (276)
Q Consensus 238 ~~~~~ 242 (276)
++.+|
T Consensus 173 ~~~~e 177 (433)
T PF03092_consen 173 FLLEE 177 (433)
T ss_pred Hhhhh
Confidence 66665
No 225
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.73 E-value=6.6e-11 Score=105.00 Aligned_cols=155 Identities=12% Similarity=0.023 Sum_probs=103.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh--h--hhhH-----HHHHHH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG--F--SFSF-----WMIAIC 160 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~--~--~~~~-----~~~~~~ 160 (276)
+.+.+..+.+.. -.......+...++.++..++.||+|||++++.+.++.++..+.++ . ..+. ...++.
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 466666776655 2223333445556777777999999999999999988887777664 1 1111 111122
Q ss_pred HHHHHhhhh-hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 161 RMLVGVGEA-SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 161 r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
-.+..++.+ +..+....+..|.+|.+.|+++.++......++.++++.+...+. ..+-...+++.+++.++..+..++
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 222222222 334556678899999999999999999999999999988877776 444245566666666666777777
Q ss_pred hcccccCC
Q 023849 239 MKPLQLKG 246 (276)
Q Consensus 239 ~~~~~~~~ 246 (276)
+.||+...
T Consensus 435 ~lpET~g~ 442 (451)
T PF00083_consen 435 FLPETKGK 442 (451)
T ss_pred EEeeCCCC
Confidence 78887644
No 226
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.72 E-value=4.4e-06 Score=72.13 Aligned_cols=149 Identities=9% Similarity=-0.010 Sum_probs=119.8
Q ss_pred cccccc-cCCCchhHH-HHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 90 TGIQGD-FDLNNFQDG-VLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
|++.+. .|++..++. -+.-...-.+.+..++...+.|.++.|++++++.+...+...+..+.++...+-+..++-|++
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence 666665 899888874 566677777888889999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc---ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.+. ..+-.+++-...|+++--++.+......-+|..++.+++..+. ...++...++......+.++..+++
T Consensus 108 ~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 108 TAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 665 5667889988889998889999999999999999999988777 3345555555544444444444444
No 227
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.72 E-value=5.9e-07 Score=67.38 Aligned_cols=107 Identities=11% Similarity=0.188 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 106 LSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 106 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
-.++......+++++.+.+.+++|.|+.++++.++..+-... -+.++.+.++.+-++.|++.+..++....++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 356666667788888999999999999999999999865443 3567888999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 186 AKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 186 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
+.+++..+++......+.++|.++.-.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888888887765544
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.70 E-value=1.6e-06 Score=76.22 Aligned_cols=143 Identities=13% Similarity=0.058 Sum_probs=94.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG-----FSFSFWMIAICRMLVG 165 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~r~l~G 165 (276)
.+++.+|.++.+.++.......+..+++.+.+.+.++..+++.+.....+..++.++.. ..++++.+++..++.|
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~ 323 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYA 323 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 44566799999999998888888888888888876554444443333333333332222 1234444567888889
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHH
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAV 234 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~ 234 (276)
+|.+...+......- .-....+|++.++.+.....+..+++..++++...+-++.|...+.+..+...
T Consensus 324 ~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (413)
T PRK15403 324 FGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVIVV 391 (413)
T ss_pred HHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 998888877764332 11223479999999988888888899999988744556666666655444333
No 229
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.69 E-value=1.3e-06 Score=79.05 Aligned_cols=157 Identities=10% Similarity=-0.056 Sum_probs=101.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhH-------------HH
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSF-------------WM 156 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 156 (276)
+.+.+..|.+... .+...+..+..+++..+..++.||+|||+.++.+...+.++.++++..... ..
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 4556666665433 555556666677777888999999999999999999999988877754321 11
Q ss_pred HHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHH-
Q 023849 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAV- 234 (276)
Q Consensus 157 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~- 234 (276)
+....+.......+..++...+.+|.+|.+.|+++.++......+...+-......+. ..++...|...+..+.+..+
T Consensus 398 ~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~ 477 (513)
T KOG0254|consen 398 IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLII 477 (513)
T ss_pred HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 1222222222223334555568899999999999999888777666554433322232 22345666666666666666
Q ss_pred HHHhhcccccCCC
Q 023849 235 LGFVMKPLQLKGF 247 (276)
Q Consensus 235 ~~~~~~~~~~~~~ 247 (276)
..+++.||.....
T Consensus 478 fv~~~~pETkg~s 490 (513)
T KOG0254|consen 478 FVFFFVPETKGLT 490 (513)
T ss_pred HheEEcccCCCCc
Confidence 5666678876543
No 230
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.68 E-value=2e-07 Score=78.70 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=78.2
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-c-------------
Q 023849 150 FSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-H------------- 215 (276)
Q Consensus 150 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~------------- 215 (276)
...+++.++++-++.|.|.+...+..+.++++..+++++++.+++.+.++.+|.+++|++++.+. .
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999999999776 2
Q ss_pred ---cchhHHHHHhHHHHHHHHHHHHhh
Q 023849 216 ---YNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 216 ---~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
..|+++|++.+.+..+..+++.+.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~ 112 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFL 112 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 379999997777665555544443
No 231
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.66 E-value=1.6e-06 Score=77.01 Aligned_cols=140 Identities=16% Similarity=0.041 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHhHHHHhhhccCC-hhhHHHHHHHHHHHHHHHhhhhh---------------------HHHHHHHHH
Q 023849 105 VLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFSFS---------------------FWMIAICRM 162 (276)
Q Consensus 105 ~~~~~~~~~~~i~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r~ 162 (276)
+....+.+...+.+++.-++.+++|+ |++..++.++.+++.+...+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 34455555556777888899999995 67778888888888777665543 366778889
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcc--hhhhHHHHHHHHHhhhhhhHHHHHHHhhc---ccchhHHHHHhHHHHHHHHHHHH
Q 023849 163 LVGVGEASFISLAAPFIDDNAPV--AKKTAWLGVFYMCLPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
+.|+..+..+..-++++++..++ ++.|..+|+++.+..+.+++..+..|.+. ..+-.+.+.+.++..++..+..+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 45699999999999999999887777754 34567889999999999998888
Q ss_pred hhccccc
Q 023849 238 VMKPLQL 244 (276)
Q Consensus 238 ~~~~~~~ 244 (276)
+..|+.+
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 8888754
No 232
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.65 E-value=3.9e-08 Score=84.50 Aligned_cols=132 Identities=10% Similarity=-0.040 Sum_probs=95.6
Q ss_pred HHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHh-hhhhhhhcHHHHHhhcCcchhh
Q 023849 114 LLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS----FWMIAICRMLVGV-GEASFISLAAPFIDDNAPVAKK 188 (276)
Q Consensus 114 ~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~r 188 (276)
++.+-.+...++|++|||++.+-|.+++++..+..+...+ -..+++...+..+ +.-+.......+-+|.+|.+-|
T Consensus 361 ~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR 440 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVR 440 (538)
T ss_pred cCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHh
Confidence 3446677788899999999999999999999998887765 1222222222222 2223334445566999999999
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHhhc------ccchhHHHHHhHHHHHHHHHHHHhhcccccCC
Q 023849 189 TAWLGVFYMCLPSGYAIGYVYGGWVG------HYNWRYAFWGEAILMFPFAVLGFVMKPLQLKG 246 (276)
Q Consensus 189 ~~~~~~~~~~~~~g~~~g~~~~~~l~------~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (276)
++..|+....+-+|.++|...-.++. ..+.++++++.+...++..++.+ +.||+.+.
T Consensus 441 ~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~-l~pEtk~~ 503 (538)
T KOG0252|consen 441 STCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL-LIPETKGK 503 (538)
T ss_pred hhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE-Eeeccccc
Confidence 99999999999999999988777766 35789999999887765555444 44665443
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.64 E-value=2.4e-06 Score=73.01 Aligned_cols=126 Identities=11% Similarity=0.089 Sum_probs=97.4
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC-----ChhhHHH-HHHHHHHHHHHHhhh-----h-------
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN-----PFRLIGV-GLTVWTLAVVGCGFS-----F------- 152 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g-----rr~~~~~-~~~~~~~~~~~~~~~-----~------- 152 (276)
.+..|++++..-.+.+.+...+.. ...+.+|+.+|+.+ ||..+++ |.++...+..+..++ .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 455788999888888888877655 56899999999988 7766654 455555544444332 2
Q ss_pred h--HH--HHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc
Q 023849 153 S--FW--MIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN 217 (276)
Q Consensus 153 ~--~~--~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~ 217 (276)
+ .+ ...+...+.|+|.+...+...++++|..|+++|+++.++......+|.+++..+.+.+. .+.
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 1 22 33445678999999999999999999999999999999999999999999998888777 444
No 234
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.50 E-value=3.9e-06 Score=73.61 Aligned_cols=154 Identities=10% Similarity=0.030 Sum_probs=119.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc----cCCh-hhHHHHHHHHHHHHHHHhhhh------hHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPF-RLIGVGLTVWTLAVVGCGFSF------SFWMIAI 159 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~grr-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 159 (276)
++.+.+|+++..+|.+..+.=+--++.-|+.|.+.|| +||+ +.++++.+-.++.+.++-.++ +.....+
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 5677889999999999999999999999999999996 6764 456677777887777776665 4556667
Q ss_pred HHHHHHhhhhhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHH----Hhhc----ccchhHHHHHhHHHHH
Q 023849 160 CRMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYG----GWVG----HYNWRYAFWGEAILMF 230 (276)
Q Consensus 160 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~----~~l~----~~~w~~~~~~~~~~~~ 230 (276)
...+.+++.......-.++..++.+ +++|.+..+.-+.+..+|..+...+. ..+. ..||+.+.++.+++.+
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 7888889888888777888888775 68999999999999999876644333 2332 2478888888888887
Q ss_pred HHHHHHHhhccccc
Q 023849 231 PFAVLGFVMKPLQL 244 (276)
Q Consensus 231 ~~~~~~~~~~~~~~ 244 (276)
+..+++++-.+|+.
T Consensus 198 i~~l~~~~~v~ER~ 211 (467)
T COG2211 198 ILLLFCFFNVKERV 211 (467)
T ss_pred HHHHHHHHHhhccc
Confidence 77777777655544
No 235
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.47 E-value=1.6e-05 Score=71.01 Aligned_cols=144 Identities=14% Similarity=0.049 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHH-HHHHHHHHHHHHhhh--hhHHHHHHHHHHHHhhhhhhhhcHHHH
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGV-GLTVWTLAVVGCGFS--FSFWMIAICRMLVGVGEASFISLAAPF 178 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~ 178 (276)
..++..++..+..++..|+.|.++|+-|+|+.++. ..++..+...++.+. ++++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677889999999999999999999887665554 444455566665553 345555555666667888888888999
Q ss_pred HhhcCcchhh--------------------------hHHHHHHHHHhhhhhhHHHHHHHhhc--c-------cchhHHHH
Q 023849 179 IDDNAPVAKK--------------------------TAWLGVFYMCLPSGYAIGYVYGGWVG--H-------YNWRYAFW 223 (276)
Q Consensus 179 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~--~-------~~w~~~~~ 223 (276)
+.|..+++.+ ++..+.-...+.+|.++.-++.-.+. . ..-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 89999999999999988776654443 1 23588888
Q ss_pred HhHHHHHHHHHHHHhhcccccC
Q 023849 224 GEAILMFPFAVLGFVMKPLQLK 245 (276)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~ 245 (276)
+.++.-++..+..+++.|+.++
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC
Confidence 8888888887777777776654
No 236
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.43 E-value=2.9e-05 Score=70.43 Aligned_cols=152 Identities=11% Similarity=-0.059 Sum_probs=106.4
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHH---HHHHHHHHHHhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFW---MIAICRMLVGVGEA 169 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~r~l~G~~~~ 169 (276)
...+|.+. ..................+...|++|||.....+.++..++.++.++..... ...+...+..++.+
T Consensus 345 ~~~lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
T KOG0255|consen 345 VSGLGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG 421 (521)
T ss_pred hhhcCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence 34455443 3333333335555666668999999999999999999999999888876443 35566666667777
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHHHHHHHHHHHhhcccccCCC
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAILMFPFAVLGFVMKPLQLKGF 247 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (276)
..+.....+.+|++|...|..+.+.......+|.+++|.+............+...+....+..++..++.||+....
T Consensus 422 ~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~ 499 (521)
T KOG0255|consen 422 SAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKP 499 (521)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 777777899999999999999999999999999999998876554322222222234444555555556667765443
No 237
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.43 E-value=2e-06 Score=76.63 Aligned_cols=137 Identities=14% Similarity=0.069 Sum_probs=90.8
Q ss_pred cccccc-cCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc----cCChhhHHHHHHHHHH-HHHHHhhhhhHHHHHHHHHH
Q 023849 90 TGIQGD-FDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFRLIGVGLTVWTL-AVVGCGFSFSFWMIAICRML 163 (276)
Q Consensus 90 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~grr~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~l 163 (276)
|.+.++ .|.+..+.+.+.+.+.++.+++.+++|+++|| ..+|........++.+ +........+.......-+.
T Consensus 297 pl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ 376 (495)
T KOG2533|consen 297 PLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLI 376 (495)
T ss_pred HHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHh
Confidence 455555 56899999999999999999999999999999 6667666666555544 43444444334444444444
Q ss_pred HHhhhhhhhhcHHHHHhhcCcchh-hhHHHHHHHHHhhhhhhHH-HHHHHhhc-ccchhHHHHHhH
Q 023849 164 VGVGEASFISLAAPFIDDNAPVAK-KTAWLGVFYMCLPSGYAIG-YVYGGWVG-HYNWRYAFWGEA 226 (276)
Q Consensus 164 ~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g-~~~~~~l~-~~~w~~~~~~~~ 226 (276)
.+.+.....+.+...+++....+. |-...+....+.+.++.++ ++..+... .++|.+.|+...
T Consensus 377 ~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 377 GPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred cchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 445566667777888888776554 4444555555555555554 44455555 678888884433
No 238
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=1.2e-05 Score=71.18 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=110.7
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHH-HhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFA-SLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 169 (276)
++...++++..+.+.+.+...+...+++++.. .+...+|-|++...|++.-.+...+.+++++.|+++...++.++. +
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 67788999999999999998888889888888 677789999999999999999999999999999999998887776 6
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
...+...+.++.+.+++++|+++++......+..+++|.+-+.+.
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 777889999999999999999999999999999999988776664
No 239
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.32 E-value=5.7e-05 Score=67.57 Aligned_cols=137 Identities=10% Similarity=0.054 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCC--hh-----hHHHHHHHHHHHHHHHhhh---------hhHHHHHHHHHHHHh
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNP--FR-----LIGVGLTVWTLAVVGCGFS---------FSFWMIAICRMLVGV 166 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~gr--r~-----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~ 166 (276)
.+|+.+++.+..++.+|+.+++=.|.++ |. =+.+|+++.+++++++.++ .+.+++++..+++++
T Consensus 310 ~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~ 389 (493)
T PRK15462 310 TAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGF 389 (493)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5788899999999889888888666532 21 1567888888887665432 266778899999999
Q ss_pred hhhhhhhcHHHHHhhcCcchhhhHHHHHHHHH-hhhhhhHHHHHHHhhc-c------------cchhHHHHHhHHHHHHH
Q 023849 167 GEASFISLAAPFIDDNAPVAKKTAWLGVFYMC-LPSGYAIGYVYGGWVG-H------------YNWRYAFWGEAILMFPF 232 (276)
Q Consensus 167 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~-~------------~~w~~~~~~~~~~~~~~ 232 (276)
|.-...|+..+.+++..|++.||+.+|.+... ..+|..++..+++... . ..+...|...++..+++
T Consensus 390 gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 390 AELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999764 3577777666655553 1 13556777777777666
Q ss_pred -HHHHHhh
Q 023849 233 -AVLGFVM 239 (276)
Q Consensus 233 -~~~~~~~ 239 (276)
.++.+.+
T Consensus 470 ~~~~~~~~ 477 (493)
T PRK15462 470 VGVVLMIW 477 (493)
T ss_pred HHHHHHHH
Confidence 5555444
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.32 E-value=5.4e-06 Score=71.57 Aligned_cols=125 Identities=14% Similarity=0.200 Sum_probs=99.6
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc----cCChhhHHHH-HHHHHHHHHHHhhhhhH----------
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS----VNPFRLIGVG-LTVWTLAVVGCGFSFSF---------- 154 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~----~grr~~~~~~-~~~~~~~~~~~~~~~~~---------- 154 (276)
+.+..+.|++.+..+.+....-+...+.+++.|..+|| |||||.+++. .+..+++.++.+++.++
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 46677899999999998888888889999999999995 7988877655 45556677777776532
Q ss_pred -------HHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhH-HHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 155 -------WMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTA-WLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 155 -------~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.+++++.-+.=++.-.....+-+++.|.+..+++.+ +.+.+..+..+|+++|..++++..
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 345555566666776788888999999998777666 999999999999999999988664
No 241
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.30 E-value=7.6e-06 Score=69.17 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=115.3
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC--ChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
...||.++.|.|.+.+...+...+.+....+..+|.. -+-.+...+.++.-..++.+.+.....+.++..+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4789999999999999999999999999899999887 67777777777777777888888888889999999998888
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHH
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAIL 228 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~ 228 (276)
..+....++....|.++||.+.|+......++-++||+++|.+. ..+-+.++...+.+
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L 428 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGAL 428 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHH
Confidence 88888999999999999999999999999999999999998876 33444444444443
No 242
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.17 E-value=1.6e-05 Score=68.87 Aligned_cols=108 Identities=20% Similarity=0.252 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhh---------hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcch---hhhHHHHHHHHHh
Q 023849 132 RLIGVGLTVWTLAVVGCGFSF---------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA---KKTAWLGVFYMCL 199 (276)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 199 (276)
+++.++.++..+|.++..++. +.+.++++..+.++|.|+.-+...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 467788888888888744442 2367889999999999999999999999999865 5778889999999
Q ss_pred hhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 200 PSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 200 ~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
++|..+++.+.+++. +.+|.+.|.+.++..++..+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999999 9999999999988776665554443
No 243
>PTZ00207 hypothetical protein; Provisional
Probab=98.15 E-value=3e-05 Score=70.66 Aligned_cols=149 Identities=7% Similarity=-0.134 Sum_probs=106.4
Q ss_pred ccccccc-CCCc-hhHHH-HHHHHHHHHHHHHhHHHHhhhc---------cCChhhHHHHHHHHHHHHHHHhhhhhHHHH
Q 023849 90 TGIQGDF-DLNN-FQDGV-LSSAFMVGLLVASPIFASLARS---------VNPFRLIGVGLTVWTLAVVGCGFSFSFWMI 157 (276)
Q Consensus 90 ~~~~~~~-~~~~-~~~~~-~~~~~~~~~~i~~~~~g~l~d~---------~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (276)
.+|.+.+ |.+. .+... +.+++.++.++|.+..|.+... +.|--.+.+..+ +.++.+++.+.-....+
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L 455 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAAL 455 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHh
Confidence 4677777 5522 22222 7888889999999988887721 222223334444 55555655555444689
Q ss_pred HHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHH-HHHHHhhc--c------------cchhHHH
Q 023849 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIG-YVYGGWVG--H------------YNWRYAF 222 (276)
Q Consensus 158 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g-~~~~~~l~--~------------~~w~~~~ 222 (276)
.+.-++.|++.|..+++....++|+|. |+-|+-..+......+|..+- -.+.|.+. + .-++.+|
T Consensus 456 ~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~ 534 (591)
T PTZ00207 456 PLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPL 534 (591)
T ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHH
Confidence 999999999999999999999999999 999999888888888888774 34445443 1 1278899
Q ss_pred HHhHHHHHHHHHHHHhhc
Q 023849 223 WGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~ 240 (276)
++.+.+++...+....+.
T Consensus 535 ~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 535 AFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHHHHHHHhhee
Confidence 999998888887766653
No 244
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.13 E-value=4.7e-05 Score=65.80 Aligned_cols=117 Identities=11% Similarity=0.116 Sum_probs=87.2
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHH---HHhhhhhHHHHHHHHHHHHhhhhhhh
Q 023849 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVV---GCGFSFSFWMIAICRMLVGVGEASFI 172 (276)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~l~G~~~~~~~ 172 (276)
+.-...+..+....|.+|.+++.--...+ |+.+-+++.+...+..+..+ ..-+.++.|..++.-+..|+..|..+
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH
Confidence 44445677888889999888876543322 44343443333333333333 33345788999999999999999999
Q ss_pred hcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 173 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
......+.|-.|+++|-.++|....+-++|..++.+++-.+.
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888876654
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.10 E-value=0.00071 Score=60.14 Aligned_cols=125 Identities=10% Similarity=0.085 Sum_probs=93.6
Q ss_pred cccccccCC-----CchhHHHHHHHHHHHHHHH-HhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh----h-------
Q 023849 90 TGIQGDFDL-----NNFQDGVLSSAFMVGLLVA-SPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS----F------- 152 (276)
Q Consensus 90 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~-~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~----~------- 152 (276)
..+++.+.+ +.+...++-+...+...+. .++.+++++|++|++++-+....+.+...++++. +
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 466666655 3356788888777776666 8999999999999999988877777766665554 0
Q ss_pred --------------------hHHHHHHHHHHHHhhhhhhhh-cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHH
Q 023849 153 --------------------SFWMIAICRMLVGVGEASFIS-LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (276)
Q Consensus 153 --------------------~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (276)
+.|...+..+...+-.....+ .-..+++|.++.++-.|..++++.+.++|.++++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444455555455554 67889999999999999999999999999999998877
Q ss_pred hhc
Q 023849 212 WVG 214 (276)
Q Consensus 212 ~l~ 214 (276)
++.
T Consensus 187 ~~~ 189 (472)
T TIGR00769 187 YFS 189 (472)
T ss_pred HHH
Confidence 765
No 246
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.04 E-value=2.5e-05 Score=51.26 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=46.3
Q ss_pred ccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHH
Q 023849 89 GTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVW 141 (276)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~ 141 (276)
++...++.|+++.++|.+.++..+...++++++|.++||+++++.+.....+.
T Consensus 23 l~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 23 LPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 35666789999999999999999999999999999999999988877765543
No 247
>PRK03612 spermidine synthase; Provisional
Probab=97.98 E-value=0.00076 Score=61.01 Aligned_cols=141 Identities=11% Similarity=-0.051 Sum_probs=82.3
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHH---H-HHH---hhhhhH-HHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA---V-VGC---GFSFSF-WMIAICRM 162 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~---~-~~~---~~~~~~-~~~~~~r~ 162 (276)
.+.--+|-+..+.+.+.+++.+|..+|+.+.+++.++.-++.. .+.+.+..++ . ++. ...... ..++...+
T Consensus 40 ~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 118 (521)
T PRK03612 40 LASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVL 118 (521)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567788888999999999999999999888744322222 1111111111 1 111 111111 12233445
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHH
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~ 233 (276)
+.|+..|...|....+..+... ++-+...|-.+....+|.++|.++.+++. ..|-..+.++.+.+.+++.
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 6778888887777666654322 23456678888888888888888877776 4564444444444443333
No 248
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.84 E-value=0.00053 Score=60.30 Aligned_cols=141 Identities=17% Similarity=0.247 Sum_probs=107.9
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhccCCh-------hhHHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHHH
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLARSVNPF-------RLIGVGLTVWTLAVVGCGFS----------FSFWMIAICRMLV 164 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~ 164 (276)
..++..+.+.+..++.+++..++..+.+++ .=+-+++.+...+.++.... .+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 358889999999999999998888885544 12445666666666554443 2678899999999
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHh-------hcccchhHHHHHhHHHHHHHHHHHH
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW-------VGHYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~-------l~~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
++|.=...|+..+++....|++-.+..++++......|+.++..+.+. .....-...|+..+...++..+..+
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888887777662 2244556677777777776666655
Q ss_pred hhccc
Q 023849 238 VMKPL 242 (276)
Q Consensus 238 ~~~~~ 242 (276)
...|+
T Consensus 485 ~~~~~ 489 (498)
T COG3104 485 LLSPK 489 (498)
T ss_pred HhhHH
Confidence 55443
No 249
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.82 E-value=0.0007 Score=58.64 Aligned_cols=135 Identities=14% Similarity=0.045 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhc
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDN 182 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 182 (276)
.+.+.-+-.+...+..+.+.++.+|+.-+.=..++.++.+++.++.+++++.+.-+++-++.+++.|........+.. .
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~ 139 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-F 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-h
Confidence 344555555666777777888899887666667777788889999999999999999999999999988887777654 5
Q ss_pred CcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHhhccc
Q 023849 183 APVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFVMKPL 242 (276)
Q Consensus 183 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 242 (276)
+++ ...+-+..+.+.++++|+..-..+. ....|.++++...+.++..+..++..|.
T Consensus 140 y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 140 YGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred cCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 553 3567788888888888887655554 4456778888776655554444444443
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.81 E-value=5.5e-05 Score=61.22 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=72.1
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
++-+.+|+...++|.+.....-..++...+.|-++||-|||+.-+.-++...++++ .-.++.+-.++++|++.|+..+.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSL 140 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHH
Confidence 66778899999999887777777788888999999999999976554444444322 33456888999999999999999
Q ss_pred hhhcHHHH-HhhcC
Q 023849 171 FISLAAPF-IDDNA 183 (276)
Q Consensus 171 ~~~~~~~~-i~~~~ 183 (276)
.+..--++ +.|..
T Consensus 141 LFSaFEsWliaEHn 154 (454)
T KOG4332|consen 141 LFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 98888776 56665
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.75 E-value=0.00034 Score=63.70 Aligned_cols=150 Identities=15% Similarity=0.129 Sum_probs=117.7
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHHHHHHHHHhhhh----------------
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARS-VNPFRLIGVGLTVWTLAVVGCGFSF---------------- 152 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~---------------- 152 (276)
.++.++++.+...+.-....+.-......+..++++|- +||-+++.++.++..++.++..+..
T Consensus 62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~ 141 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG 141 (571)
T ss_pred HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence 57888888888778888888888888899999999996 5899999999888887765443321
Q ss_pred ---------hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCc---ch-h--hhHHHHHHHHHhhhhhhHHHHHHHhhc-cc
Q 023849 153 ---------SFWMIAICRMLVGVGEASFISLAAPFIDDNAP---VA-K--KTAWLGVFYMCLPSGYAIGYVYGGWVG-HY 216 (276)
Q Consensus 153 ---------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~-~--r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~ 216 (276)
....+..+.-+..+|.|+.-+...++-+|-++ ++ + +...+.++....++|..++..+.-++. +.
T Consensus 142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~ 221 (571)
T KOG1237|consen 142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV 221 (571)
T ss_pred CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 12355566677778999999999999999998 32 2 237788899999999999998888887 89
Q ss_pred chhHHHHHhHHHHHHHHHHHHhh
Q 023849 217 NWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 217 ~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+|.+.|.+..+..++..++.+..
T Consensus 222 ~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred cceeeccHHHHHHHHHHHHHHcC
Confidence 99999999888776665554443
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.73 E-value=0.00083 Score=59.51 Aligned_cols=117 Identities=13% Similarity=0.016 Sum_probs=91.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh-h---------hhHHHHHHHHHHHHhh
Q 023849 98 LNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF-S---------FSFWMIAICRMLVGVG 167 (276)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~r~l~G~~ 167 (276)
+++...+.+..+..++..++..+..++..+..-|+++.+..++.++..+.-.. . ++.+..+..-++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888899988888889999999988888888899988888777765543221 1 1122233344566666
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.+..+-....++++.+|+..-|+.+++.....++|..++..++..+.
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~ 378 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLM 378 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777888999999999999999999999999999988888776
No 253
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.73 E-value=0.0005 Score=59.24 Aligned_cols=145 Identities=12% Similarity=0.032 Sum_probs=107.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhH-HHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHhhhhhhhhcH
Q 023849 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLI-GVGLTVWTLAVVGCGFSFS---FWMIAICRMLVGVGEASFISLA 175 (276)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~r~l~G~~~~~~~~~~ 175 (276)
.+..+...++..+..++.+|+.|.++|+.|+|+.. -....+..++.++..+.++ ++..++..++..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 34568888899999999999999999999966654 4555555666666666654 4455566778888888888999
Q ss_pred HHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH--Hhhc-----------------ccchhHHHHHhHHHHHHHHHHH
Q 023849 176 APFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG--GWVG-----------------HYNWRYAFWGEAILMFPFAVLG 236 (276)
Q Consensus 176 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~-----------------~~~w~~~~~~~~~~~~~~~~~~ 236 (276)
.+++.+..++++.++..++-.....+|+.+.-++. ..+. ...-|.++.+.++.-++..+-.
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999988888888877788877655442 1111 1346888888888887777777
Q ss_pred Hhhccccc
Q 023849 237 FVMKPLQL 244 (276)
Q Consensus 237 ~~~~~~~~ 244 (276)
++..++.+
T Consensus 217 ~~~v~~~~ 224 (438)
T COG2270 217 ILNVHDAE 224 (438)
T ss_pred Hhcccccc
Confidence 76655544
No 254
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.42 E-value=0.00092 Score=58.93 Aligned_cols=106 Identities=15% Similarity=0.170 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcch
Q 023849 107 SSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA 186 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 186 (276)
.++......+++++.+.+.|+.|+|+.++++..+.....+..-+ .|-+.+++...+.|+|.+..+.....+++|+.+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77777888899999999999999999999999999887766554 45777889999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 187 KKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 187 ~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
.+.+..++.......+.++|..+...+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 999999999998888888886654443
No 255
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.34 E-value=0.00074 Score=58.64 Aligned_cols=151 Identities=9% Similarity=-0.059 Sum_probs=95.9
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCC-hhhHHHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHhhhh
Q 023849 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP-FRLIGVGLTVWTLAVVGCGFS----FSFWMIAICRMLVGVGEA 169 (276)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~ 169 (276)
.-|.+....|++.....++.++++...|.+.||... |.++.+......++.+..... ...+.++..-.+.|++..
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~ 374 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGT 374 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhc
Confidence 344555778999999999999999999999999764 555555555555553222211 134455666778888888
Q ss_pred hhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccc---hhH-HHHHhHHHHHHHHHHHHhhccccc
Q 023849 170 SFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYN---WRY-AFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 170 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~---w~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
..+|+...+-.|..-|..-+...|+.+...++=.++-..+-+... ..+ |.+ .-+.......+..++..+++|+..
T Consensus 375 ~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 375 GYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred CCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 888988888877665555556667776665555555555555555 333 333 333334444455555556666544
Q ss_pred C
Q 023849 245 K 245 (276)
Q Consensus 245 ~ 245 (276)
+
T Consensus 455 R 455 (480)
T KOG2563|consen 455 R 455 (480)
T ss_pred h
Confidence 3
No 256
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.32 E-value=0.0017 Score=57.12 Aligned_cols=124 Identities=15% Similarity=0.015 Sum_probs=92.8
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh------hhh----hHHHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG------FSF----SFWMIAIC 160 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~ 160 (276)
.+...-|+++..+|.+-+.-.+..+.+.+...++.+|+|..+.=.++...-.+...++. -.+ +...++.+
T Consensus 283 ~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~g 362 (432)
T PF06963_consen 283 AYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGG 362 (432)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHH
Confidence 33444599999999999999999999999999999999998887777665433332222 111 34455555
Q ss_pred HHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 161 RMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 161 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
-++.=+|.=.+-....-++.|..|+++||...|.-....++-..+...++-.+.
T Consensus 363 i~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 363 IALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 566666666777778888999999999999999999988888777766654443
No 257
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.20 E-value=0.033 Score=49.33 Aligned_cols=106 Identities=14% Similarity=0.257 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHhHHHHhhh---ccCChhhHHHHHHHHHHHHHHHhhh------------------hhHHHHHHHHHHHH
Q 023849 107 SSAFMVGLLVASPIFASLAR---SVNPFRLIGVGLTVWTLAVVGCGFS------------------FSFWMIAICRMLVG 165 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d---~~grr~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r~l~G 165 (276)
.-...++..+++.+.+.+.+ ++||++.+.++..+..+..++.-.. +++....+.-++.|
T Consensus 285 ~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G 364 (461)
T KOG3098|consen 285 SIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLG 364 (461)
T ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHh
Confidence 33444555666667777765 5799999999998888877765442 24667778889999
Q ss_pred hhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 166 VGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 166 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
++-+........+++..+ +++|..+.+++..-..++..++-......
T Consensus 365 ~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 365 FGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred hHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999 58888888888877777776655444433
No 258
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.10 E-value=0.00012 Score=66.46 Aligned_cols=125 Identities=13% Similarity=0.123 Sum_probs=0.0
Q ss_pred cccccccCCCchhHHHHHHHHHH-HHHHHHhHHHHhhhccC--ChhhHHHHHHHHHHHHHHHh---h--------h----
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCG---F--------S---- 151 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~g--rr~~~~~~~~~~~~~~~~~~---~--------~---- 151 (276)
.+++.+|++++++++++.++..+ +.++|.+++|++..|+. .|..+.+..++..+..++.. + +
T Consensus 330 KylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~ 409 (539)
T PF03137_consen 330 KYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTV 409 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecC
Confidence 57888999999999998876666 56789999999999874 45554444433333332200 0 0
Q ss_pred ---------------------------------------hhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHH
Q 023849 152 ---------------------------------------FSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWL 192 (276)
Q Consensus 152 ---------------------------------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 192 (276)
+.+..+++..++.-+..+.........+-+..|+++|+.++
T Consensus 410 ~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~Al 489 (539)
T PF03137_consen 410 PYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFAL 489 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhh
Confidence 01234444444444444555555556667888999999999
Q ss_pred HHHHHHhhh-hhhHHHHHHHhhc
Q 023849 193 GVFYMCLPS-GYAIGYVYGGWVG 214 (276)
Q Consensus 193 ~~~~~~~~~-g~~~g~~~~~~l~ 214 (276)
|+......+ |.+-||++-|.+.
T Consensus 490 Gv~~~~~rllg~IPgPIifG~ii 512 (539)
T PF03137_consen 490 GVQWLIIRLLGFIPGPIIFGAII 512 (539)
T ss_dssp -----------------------
T ss_pred hHHHHHHHhhcCcchHHHHhHHH
Confidence 988766654 6666999888776
No 259
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.01 E-value=0.002 Score=56.22 Aligned_cols=129 Identities=9% Similarity=0.001 Sum_probs=75.9
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccC----ChhhHHHHHHHH------HHHHHHHh--hhhhHHHHH
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVN----PFRLIGVGLTVW------TLAVVGCG--FSFSFWMIA 158 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g----rr~~~~~~~~~~------~~~~~~~~--~~~~~~~~~ 158 (276)
+..+-.|.+..+..++..+...+..+|.+++|.++||+- +-.......+.. .+..+.+. +..+...+.
T Consensus 273 ~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~ 352 (493)
T KOG1330|consen 273 YSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFG 352 (493)
T ss_pred HHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHH
Confidence 333344556666677788888899999999999999942 211111111111 11111111 122333334
Q ss_pred HHHHHHHhhhhh-hhhcHHHHHhhcCcchhhhHHHHHHHHHhhh-hhhHHHHHHHhhc--ccchh
Q 023849 159 ICRMLVGVGEAS-FISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG--HYNWR 219 (276)
Q Consensus 159 ~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~--~~~w~ 219 (276)
+..++.|+.... .++...-+..+..|+++|..+.++-.....+ |-+-+|.+.|.+. -.||+
T Consensus 353 ~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 353 LILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 444555544333 3444555678899999999999988766655 4444666888887 45665
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.89 E-value=0.0016 Score=57.70 Aligned_cols=81 Identities=12% Similarity=0.066 Sum_probs=61.2
Q ss_pred HHHHH-HHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHH
Q 023849 156 MIAIC-RMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 156 ~~~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~ 233 (276)
.+++. -++.|++.-.......++-++...+++++...++++.....+..+||++...+. ..|.|+.+.+.+...++..
T Consensus 389 ~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 389 LYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVA 468 (488)
T ss_pred hheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHH
Confidence 33444 345666666666667788899999999999999999999999999999988887 7788877776665544444
Q ss_pred HHH
Q 023849 234 VLG 236 (276)
Q Consensus 234 ~~~ 236 (276)
.++
T Consensus 469 ~l~ 471 (488)
T KOG2325|consen 469 ALW 471 (488)
T ss_pred HHH
Confidence 433
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.85 E-value=0.044 Score=48.63 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCCh-hhHHHHHH---HHHHHHHHHhh---------hhhHHHHHHHHHHHHhhhhh
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPF-RLIGVGLT---VWTLAVVGCGF---------SFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr-~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~~~~ 170 (276)
-.....++++-.+|..+..+.. .-++| +.+.+..+ ++....++|.. .++-+..++..++.|+..|.
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4557788888888887655431 11222 12222222 22223333432 24667777889999999999
Q ss_pred hhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHh
Q 023849 171 FISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW 212 (276)
Q Consensus 171 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (276)
..+.+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888888888888776543
No 262
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.76 E-value=0.0082 Score=55.92 Aligned_cols=125 Identities=8% Similarity=0.036 Sum_probs=86.5
Q ss_pred cccccccCCCchhHHHHHHHHHH-HHHHHHhHHHHhhhccC--ChhhHHHHHHHHHHHHHHHh-----------------
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMV-GLLVASPIFASLARSVN--PFRLIGVGLTVWTLAVVGCG----------------- 149 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~g--rr~~~~~~~~~~~~~~~~~~----------------- 149 (276)
.++++.+|+++.+++++.+...+ +.+++.++.|++.||++ .|+.+.++.++..++.++..
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~ 434 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNN 434 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeec
Confidence 46677899999999999988776 67899999999999998 45666666665555533311
Q ss_pred ----------------------h----------------------------------------------------h----
Q 023849 150 ----------------------F----------------------------------------------------S---- 151 (276)
Q Consensus 150 ----------------------~----------------------------------------------------~---- 151 (276)
- .
T Consensus 435 ~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C 514 (633)
T TIGR00805 435 PSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPC 514 (633)
T ss_pred cCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCccc
Confidence 0 0
Q ss_pred hh-HHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh-hhhHHHHHHHhhc
Q 023849 152 FS-FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG 214 (276)
Q Consensus 152 ~~-~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~ 214 (276)
++ +..+++..++..+..+.........+-+..|+++|..++|+..+...+ |.+-+|++-|++.
T Consensus 515 ~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~i 579 (633)
T TIGR00805 515 ATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLI 579 (633)
T ss_pred chhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhh
Confidence 01 223334444444444444444555667788999999999988877665 6677999988875
No 263
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.75 E-value=0.043 Score=47.08 Aligned_cols=143 Identities=13% Similarity=0.067 Sum_probs=84.4
Q ss_pred hhhHHHHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 47 PGRLLVIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
.++-+..+.+.+..++......+ .+|.+.+.-|.|.++.+.+..++. =...-+++.++.|
T Consensus 29 d~~~illLl~LYllQGiP~GL~~------------------~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVD 88 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG------------------AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVD 88 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh------------------hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhH
Confidence 33445555666777665544443 237888878888777766543322 1234467788888
Q ss_pred -----ccCChhhHH------HHHHHHHHHHHH------HhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhh
Q 023849 127 -----SVNPFRLIG------VGLTVWTLAVVG------CGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKT 189 (276)
Q Consensus 127 -----~~grr~~~~------~~~~~~~~~~~~------~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 189 (276)
|+|||+.-+ +|.++..++... -+-.++...+....++.-+..+.--.+.-.+.-.+..+++.|
T Consensus 89 s~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lg 168 (510)
T KOG3574|consen 89 SVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLG 168 (510)
T ss_pred HHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcC
Confidence 999988643 333333332211 111223333434445555666666666777777788888888
Q ss_pred HHHHHHHHHhhhhhhHHHHH
Q 023849 190 AWLGVFYMCLPSGYAIGYVY 209 (276)
Q Consensus 190 ~~~~~~~~~~~~g~~~g~~~ 209 (276)
.+......+...|.+++..+
T Consensus 169 yaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 169 YASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred chhHHHHHHHhhhHHhhcce
Confidence 87777777777777666544
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.72 E-value=0.36 Score=43.47 Aligned_cols=117 Identities=9% Similarity=0.084 Sum_probs=79.8
Q ss_pred CchhHHHHHHHHHH-HHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh--h-----------------------
Q 023849 99 NNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--F----------------------- 152 (276)
Q Consensus 99 ~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~----------------------- 152 (276)
+++.+.++=....+ +.++...+..++++++++.+++-+....+.....+.++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45556666554444 445667889999999999999887777776666655542 0
Q ss_pred ------hHHHHHHHHHHHHhhhhhhhh-cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcc
Q 023849 153 ------SFWMIAICRMLVGVGEASFIS-LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGH 215 (276)
Q Consensus 153 ------~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 215 (276)
+.|.+.+..++.-+-.....+ .-..+.+|.++.++-.+..++++.+.++|.+++..+..++..
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122333333333333333333 457889999999999999999999999999998776666553
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.64 E-value=0.35 Score=42.97 Aligned_cols=124 Identities=9% Similarity=0.125 Sum_probs=88.1
Q ss_pred ccccccCC---CchhHHHHHHHHHH-HHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh---------------
Q 023849 91 GIQGDFDL---NNFQDGVLSSAFMV-GLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS--------------- 151 (276)
Q Consensus 91 ~~~~~~~~---~~~~~~~~~~~~~~-~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--------------- 151 (276)
.+.+.+.+ ++..+.++-+..-+ +.++..++.+++.+++.+.+++-+-+..+....+++++.
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~ 127 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFS 127 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHH
Confidence 44444433 45566777777777 677888999999999999999888777777777666653
Q ss_pred h-----------------hHHHHHHHHHHHHhhhhhhhh-cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhh
Q 023849 152 F-----------------SFWMIAICRMLVGVGEASFIS-LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWV 213 (276)
Q Consensus 152 ~-----------------~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 213 (276)
. +.|...+..++.=+-...... .-....+|.+..++-.|..++++.+.+++..++..+..++
T Consensus 128 ~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 128 RDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 113333333333333333333 4567789999999999999999999999999988777777
Q ss_pred c
Q 023849 214 G 214 (276)
Q Consensus 214 ~ 214 (276)
.
T Consensus 208 ~ 208 (509)
T COG3202 208 S 208 (509)
T ss_pred h
Confidence 6
No 266
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.49 E-value=0.0029 Score=56.30 Aligned_cols=65 Identities=18% Similarity=0.107 Sum_probs=52.6
Q ss_pred CCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHH-HHHHHHHHhhh
Q 023849 87 TPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTV-WTLAVVGCGFS 151 (276)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~-~~~~~~~~~~~ 151 (276)
|.++.+.+++|+++.++|.+.+.--+..+++.|++|+++||+.+|+.++++.++ .....++..+.
T Consensus 32 pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 32 PLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred hHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 355678889999999999999999999999999999999999877766665544 44555555554
No 267
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.39 E-value=0.017 Score=53.70 Aligned_cols=125 Identities=13% Similarity=0.032 Sum_probs=85.0
Q ss_pred cccccccCCCchhHHHHHHHHHHH-HHHHHhHHHHhhhcc--CChhhHHHHHHHHHHHHHH---Hhh-------------
Q 023849 90 TGIQGDFDLNNFQDGVLSSAFMVG-LLVASPIFASLARSV--NPFRLIGVGLTVWTLAVVG---CGF------------- 150 (276)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~g~l~d~~--grr~~~~~~~~~~~~~~~~---~~~------------- 150 (276)
.+++.+||.+.+.+..+.+...+. .++|..++|++..|+ ..|....+.+++..+..+. ..+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~ 496 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTN 496 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceec
Confidence 577889999999999988666555 578889999999986 4455555544444443333 111
Q ss_pred ------------------------------------------------------------------hh------------
Q 023849 151 ------------------------------------------------------------------SF------------ 152 (276)
Q Consensus 151 ------------------------------------------------------------------~~------------ 152 (276)
.+
T Consensus 497 ~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G 576 (735)
T KOG3626|consen 497 SYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKG 576 (735)
T ss_pred CCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecC
Confidence 00
Q ss_pred --------hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhh-hhhHHHHHHHhhc
Q 023849 153 --------SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPS-GYAIGYVYGGWVG 214 (276)
Q Consensus 153 --------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~ 214 (276)
.+..|++..++.-+..+...+....++-+..++++|..++|+..+..++ |.+-+|++-|++.
T Consensus 577 ~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~I 647 (735)
T KOG3626|consen 577 YCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVI 647 (735)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhH
Confidence 1224444444544554555566667778899999999999988777665 6666999988874
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.10 E-value=0.49 Score=41.88 Aligned_cols=135 Identities=14% Similarity=0.081 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh------hhh------hHHHH---HHHHHHHHhhh
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG------FSF------SFWMI---AICRMLVGVGE 168 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~------~~~------~~~~~---~~~r~l~G~~~ 168 (276)
+...-.-.+..++.++..|.+.||..|.+++..+.++--++..+.+ +.. +-+.. ++.-.+.|...
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 3334444556778889999999999999987776655433222111 111 01222 22222222221
Q ss_pred hhhhhcHHHHH--hhc----C--cchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 169 ASFISLAAPFI--DDN----A--PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 169 ~~~~~~~~~~i--~~~----~--~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
-.. ..+.... -|| . ++..+.+..+...-.=.+..+++|++.|.+. ..+.+....+.++..++..++=+++
T Consensus 121 ~La-s~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 121 RLA-SIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHH-HhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1112211 222 2 3455666666666666778899999999998 6889988888888887777665554
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.96 E-value=0.42 Score=41.59 Aligned_cols=108 Identities=20% Similarity=0.112 Sum_probs=73.7
Q ss_pred HHHHHHH-HHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHH-H------hhhhhHHHHHHHHHHHHhhhhhhhhc
Q 023849 103 DGVLSSA-FMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG-C------GFSFSFWMIAICRMLVGVGEASFISL 174 (276)
Q Consensus 103 ~~~~~~~-~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~r~l~G~~~~~~~~~ 174 (276)
.-++... +++.-.+|.+.+.++-+.-.|+......+=...+-.+. | .+..+-+.+++...+.|+..|-....
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 3445556 88888888777777655543333332222222332232 2 22457788899999999999999999
Q ss_pred HHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH
Q 023849 175 AAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (276)
Q Consensus 175 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (276)
...+..+-.|++++-.+-.+...+...|.+.|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999988887777777777777777666553
No 270
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.92 E-value=0.0081 Score=50.75 Aligned_cols=106 Identities=18% Similarity=0.128 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHhHHHHhhhc-cCChhhHHHHH--HHHHHHHHHHh----------hhhhHHHHHHHHHHHHhhhhhhh
Q 023849 106 LSSAFMVGLLVASPIFASLARS-VNPFRLIGVGL--TVWTLAVVGCG----------FSFSFWMIAICRMLVGVGEASFI 172 (276)
Q Consensus 106 ~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~r~l~G~~~~~~~ 172 (276)
....++++-.+|..+.++..-+ -.+|++++... +++....++|. ..++-+.+++..++.|+..|...
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4667888888999887764211 13444443211 12222222331 23355777888999999999999
Q ss_pred hcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHH
Q 023849 173 SLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGG 211 (276)
Q Consensus 173 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 211 (276)
+.+..+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888888887788777776643
No 271
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=94.77 E-value=0.79 Score=41.04 Aligned_cols=122 Identities=7% Similarity=-0.012 Sum_probs=62.5
Q ss_pred ccccccc--cCCCchhHHHHH-HH--HHHHHHHHHhHHHHhhhccCChhhHHHHHH-HHHHHHHHHhhhh----------
Q 023849 89 GTGIQGD--FDLNNFQDGVLS-SA--FMVGLLVASPIFASLARSVNPFRLIGVGLT-VWTLAVVGCGFSF---------- 152 (276)
Q Consensus 89 ~~~~~~~--~~~~~~~~~~~~-~~--~~~~~~i~~~~~g~l~d~~grr~~~~~~~~-~~~~~~~~~~~~~---------- 152 (276)
+|.+.++ .+.+.++.|.+. +. |.+=..=+.+.=.....|+|||+.-++-.= +.++..+..+..-
T Consensus 23 iPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~ 102 (544)
T PF13000_consen 23 IPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGVD 102 (544)
T ss_pred chhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccccc
Confidence 3677777 677877776652 12 222122222333344558999997654432 2222222222111
Q ss_pred ------------hH--HHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH
Q 023849 153 ------------SF--WMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (276)
Q Consensus 153 ------------~~--~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (276)
+. ..+....++.=+-.+.--.++-.+.-.+..+++++.+......+.++|.+++..+-
T Consensus 103 d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 103 DALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 11 12222232333333333344555666667778888887777777777777766553
No 272
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.75 E-value=0.9 Score=40.74 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=77.6
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhccCCh--hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHH
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFI 179 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 179 (276)
..|.+-++..+..++.++..|++-.++.+- ..+.+..++.+...++++..+|+|...++.++.+.......+++..-+
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777788888889999999997776442 344444555556667888899999999999999999999999999989
Q ss_pred hhcCcchhhhHHHHHHHHHhh
Q 023849 180 DDNAPVAKKTAWLGVFYMCLP 200 (276)
Q Consensus 180 ~~~~~~~~r~~~~~~~~~~~~ 200 (276)
+.....+.-|..+|+.....-
T Consensus 379 A~~L~~~~~aLvFGiNtfvAl 399 (511)
T TIGR00806 379 ASSLSKELCALVFGINTFVAT 399 (511)
T ss_pred HHHhcccceEEEEecHHHHHH
Confidence 988887777888887766533
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.70 E-value=0.79 Score=40.17 Aligned_cols=100 Identities=12% Similarity=0.085 Sum_probs=75.8
Q ss_pred CchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhH--HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHH
Q 023849 99 NNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLI--GVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAA 176 (276)
Q Consensus 99 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 176 (276)
...-.|.+-++..+..+++++..|++..++.+..-+ ....++.+...++++..++.|...++.++.+.......+.+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334458888999999999999999997777664433 344445556667888889999999999998888888888888
Q ss_pred HHHhhcCcchhhhHHHHHHHHH
Q 023849 177 PFIDDNAPVAKKTAWLGVFYMC 198 (276)
Q Consensus 177 ~~i~~~~~~~~r~~~~~~~~~~ 198 (276)
.-++.....+.-|..+|+....
T Consensus 363 ~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHhccccceeeeeeeHHHH
Confidence 8788877777777777665554
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.70 E-value=0.28 Score=41.39 Aligned_cols=73 Identities=8% Similarity=0.171 Sum_probs=56.0
Q ss_pred HHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 111 MVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 111 ~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
.+..+.++++.+.+++++|-|+++..+........ ..-+-+.+..++-.-...|+|.+..+..--+|+++...
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 34455666777789999999999998887776632 23345688889999999999999998877777766554
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.15 E-value=0.14 Score=45.04 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcC
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNA 183 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 183 (276)
.|-..++.+...+.+....++.+|+|-|+.++.+...+.++..+.++.++.+.....+-..|+-.+....+-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 55677888888999999999999999877777777778888888888888888888887777555544444333333322
Q ss_pred c---------------------c--hhhhHHHHHHHHHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHH
Q 023849 184 P---------------------V--AKKTAWLGVFYMCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 184 ~---------------------~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~ 233 (276)
- . ..+|...|+.+....+.+++.....|.+. ..+-+.+-.+.+.+++...
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~ 489 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIG 489 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHH
Confidence 1 1 12355666777777777776544444443 3344444444444444433
No 276
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=93.85 E-value=4.2 Score=35.59 Aligned_cols=35 Identities=14% Similarity=0.068 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhh
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKK 188 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 188 (276)
.+...++.-++.+++.+..+.......++. |++.-
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~yt 150 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYT 150 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHH
Confidence 455556667778888777777666655544 55544
No 277
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=93.67 E-value=0.33 Score=41.38 Aligned_cols=124 Identities=12% Similarity=-0.021 Sum_probs=93.7
Q ss_pred cccc-cccCCCchhHH-HHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 90 TGIQ-GDFDLNNFQDG-VLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 90 ~~~~-~~~~~~~~~~~-~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
|++. .+.|++..+.. -+.-...-.+.+.-.+.=.+.|..--|++++.-.+......++..+.++.+.+=+.-++.|..
T Consensus 29 pyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~ 108 (433)
T KOG3810|consen 29 PYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPA 108 (433)
T ss_pred hhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChH
Confidence 4444 45566665542 233333444555556666789999889998888777777788888888988888888888887
Q ss_pred hhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 168 EASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.+ ...+-++++-+..+++++-++.+......-.|..+|..++..+.
T Consensus 109 tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLv 154 (433)
T KOG3810|consen 109 TA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLV 154 (433)
T ss_pred HH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHh
Confidence 44 44667888999999999999999999988888888888888777
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.48 E-value=2.5 Score=37.67 Aligned_cols=51 Identities=8% Similarity=-0.051 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHH
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYV 208 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 208 (276)
.++..++.-++.|++.+.......++.+ .+|++. ++.+..+.+++++++.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSL 155 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHH
Confidence 4666677778889998888877777766 556443 34444555555555443
No 279
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.08 E-value=3.4 Score=34.27 Aligned_cols=133 Identities=14% Similarity=0.053 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCC--hhhHHHHHHHHHHHHHHHhhh----h---hHHHHHHHHHHHHhhhhhhhh
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNP--FRLIGVGLTVWTLAVVGCGFS----F---SFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~gr--r~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~r~l~G~~~~~~~~ 173 (276)
-|.+.+.++++.++|+-+..++..|-.. ...+.+..++.++...+..+. + +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 4889999999999999999888765443 344555555544443332221 1 233335566666777889999
Q ss_pred cHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHH
Q 023849 174 LAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 174 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~ 235 (276)
...-+=.++.|.+.|...+.++-.--++-..++-..--.-. ..+-|..|.+..++..+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 99999999999999998888776544432222211100001 345567777766665554443
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.79 E-value=0.7 Score=38.79 Aligned_cols=133 Identities=12% Similarity=-0.034 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcC
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNA 183 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 183 (276)
|.+.-.-.+-..+..+.+..+.||+.--.=..+..++.+.+.++.+++++.++-+++-.+..++.|.....-..+.+ .+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cC
Confidence 44444444555666666777888865444455667778888899999999999999988888887776555444433 33
Q ss_pred cchhhhHHHHHHHHHhhhhhhHHHHHHHhhc---ccchhHHHHHhHHHHHHHHHHHHhhcc
Q 023849 184 PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGFVMKP 241 (276)
Q Consensus 184 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~w~~~~~~~~~~~~~~~~~~~~~~~ 241 (276)
++ ...+-+..+.+.++.+|..--..+. +...|.+.+++..+-++.+...++..+
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 32 2345555555556666665444444 456788888887766555555555543
No 281
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=90.27 E-value=11 Score=32.47 Aligned_cols=85 Identities=12% Similarity=0.101 Sum_probs=55.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHH-------HHHHh--hhhhHHHHHHHHHHHHhh
Q 023849 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA-------VVGCG--FSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~r~l~G~~ 167 (276)
|-+.-+.+.+.+.|.....+|+...-++.|.--.-+.+..-.++..++ ++.++ ..++-+.+.++-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 445667889999999999999988887777532222222222222111 11111 123667788889999999
Q ss_pred hhhhhhcHHHHHhh
Q 023849 168 EASFISLAAPFIDD 181 (276)
Q Consensus 168 ~~~~~~~~~~~i~~ 181 (276)
.|.-.|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999998888876
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.78 E-value=15 Score=33.16 Aligned_cols=71 Identities=15% Similarity=0.135 Sum_probs=52.4
Q ss_pred HHHHHhhhhhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHH
Q 023849 161 RMLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (276)
Q Consensus 161 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~ 231 (276)
-++.|+........--..+.+.+| +++|+..+|-++...++..++..++++.+. ..||.....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345666666666666777778777 457899999998888888877666667777 88999877776665544
No 283
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=89.44 E-value=3.2 Score=35.62 Aligned_cols=95 Identities=17% Similarity=0.073 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCCh--hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhh
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPF--RLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDD 181 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 181 (276)
|-.-++..+..+++.+..|++--.+.|. ..+.++.+.-+...++++-.+++|...++.++.+.-.....+++..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 6666777888889999999997766654 34555556666666788888899999888888887777888888888888
Q ss_pred cCcchhhhHHHHHHHHH
Q 023849 182 NAPVAKKTAWLGVFYMC 198 (276)
Q Consensus 182 ~~~~~~r~~~~~~~~~~ 198 (276)
....+.-|..+|+....
T Consensus 354 nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhhhhheeeeehHHHH
Confidence 88888888888877664
No 284
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.14 E-value=2.5 Score=35.66 Aligned_cols=110 Identities=9% Similarity=0.050 Sum_probs=76.3
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHH---HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHH
Q 023849 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVG---LTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAP 177 (276)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 177 (276)
.|.-|....|.+|.+++.-..-..- ...-+.+.+- .+++.+.-.+..+.++++..++.-+.-|+-.|..++...-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~--~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFT--MPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEe--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 4577888888888766443221111 1111122221 2223333345667889999999999999998999999888
Q ss_pred HHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHh
Q 023849 178 FIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW 212 (276)
Q Consensus 178 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (276)
-+.+-.++++|-.+++.....-.+|..++..++-.
T Consensus 366 ~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 366 NIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 88888889999999999999988888887766543
No 285
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.72 E-value=8.5 Score=31.57 Aligned_cols=103 Identities=15% Similarity=0.146 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhc-cCChhhHH----HHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHhhhhhhhh
Q 023849 104 GVLSSAFMVGLLVASPIFASLARS-VNPFRLIG----VGLTVWTLAVVGCGFS-----FSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~----~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
....-++..|..+|....|..... +.||+.+. .+.++.++..+..... .++..+.+.-++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 455666667777787888888764 56666554 2233333333332111 1456677777888877655555
Q ss_pred cHHHHHhhc--CcchhhhHHHHHHHHHhhhhhhHH
Q 023849 174 LAAPFIDDN--APVAKKTAWLGVFYMCLPSGYAIG 206 (276)
Q Consensus 174 ~~~~~i~~~--~~~~~r~~~~~~~~~~~~~g~~~g 206 (276)
+...+=-|. .+|++-|...|+.-..+.+...+.
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~ 258 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIY 258 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHHHHHHHHHHHHHH
Confidence 544443343 345555666655444433333333
No 286
>PRK10263 DNA translocase FtsK; Provisional
Probab=88.23 E-value=6.3 Score=39.65 Aligned_cols=9 Identities=0% Similarity=0.098 Sum_probs=3.5
Q ss_pred Hhhhhcccc
Q 023849 62 YVDRGTIAS 70 (276)
Q Consensus 62 ~~~~~~~~~ 70 (276)
++....+++
T Consensus 36 fL~lALiSY 44 (1355)
T PRK10263 36 WLMAALLSF 44 (1355)
T ss_pred HHHHHHHhC
Confidence 333334443
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=84.49 E-value=32 Score=31.29 Aligned_cols=72 Identities=14% Similarity=0.130 Sum_probs=48.4
Q ss_pred HHHHhhhhhhhhcHHHHHhhcCc-chhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHH
Q 023849 162 MLVGVGEASFISLAAPFIDDNAP-VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 162 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~ 233 (276)
+..|+........--..+.+.+| ++++...+|-++...++-..+-..+++.+. ..||+..-.+.-++.++..
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 44556655666666666777776 456777788777777666666557777777 8899988777655544433
No 288
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=84.26 E-value=12 Score=31.09 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhhhhhh
Q 023849 136 VGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASF 171 (276)
Q Consensus 136 ~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~ 171 (276)
.+++++++..++..+. ++.+.+.+..++.+++.+..
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3444443444433333 34455555555555554443
No 289
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=80.63 E-value=25 Score=31.92 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=43.6
Q ss_pred HHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHh
Q 023849 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGW 212 (276)
Q Consensus 158 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (276)
++.-++.-+..-..+....++=+...+|..=|+.|.+.++..++|+---..+.-+
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~ 463 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLW 463 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHH
Confidence 3345666677777788888999999999999999999999999998765544433
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=78.63 E-value=57 Score=30.34 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
|..+++-=.++.|++.........-+.-+-+|++.|+.+++++.....+|..+...+.....
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666667789999999999999999999999999999999999999999999888876665
No 291
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=78.54 E-value=30 Score=27.18 Aligned_cols=36 Identities=8% Similarity=0.082 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhHHHHhh---hccCChhhHHHHHHHHHH
Q 023849 108 SAFMVGLLVASPIFASLA---RSVNPFRLIGVGLTVWTL 143 (276)
Q Consensus 108 ~~~~~~~~i~~~~~g~l~---d~~grr~~~~~~~~~~~~ 143 (276)
....+++++|..+.+.+. ++..+|+.....+.+-++
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ 91 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAI 91 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 344445556666666662 334444444444444433
No 292
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.96 E-value=6.3 Score=27.27 Aligned_cols=51 Identities=24% Similarity=0.205 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh
Q 023849 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS 151 (276)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 151 (276)
...|-..+.|.-.+++.++.+++..|+.-+-+.=.+|..+..++..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456888899999999999999999999988888888888887777665443
No 293
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=77.03 E-value=2.7 Score=33.55 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=67.8
Q ss_pred CCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 023849 85 TCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (276)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 164 (276)
+-|.+..+.+.||++..+--=+.+.|.+|.++|.++.+.++.-+.. ....+ =.+.-.-.
T Consensus 123 REp~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~-----------------~~~fh----P~ALAMas 181 (241)
T PF11299_consen 123 REPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLAS-----------------LGIFH----PYALAMAS 181 (241)
T ss_pred cCcceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHh-----------------ccCCC----HHHHHHHc
Confidence 4455667778888877666666677777777777766655432100 00001 12223346
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
|+|.+...+.+..-+.+.+| +......++....+-+..+.|-.+.-++.
T Consensus 182 GvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifia 230 (241)
T PF11299_consen 182 GVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFIA 230 (241)
T ss_pred CCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888888888887 56666777777777777777766655554
No 294
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=76.80 E-value=23 Score=24.78 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 138 LTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
..+..+++++.++......---.|.+.+.|..+.++.-.++..|...-
T Consensus 33 l~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 33 LIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHHH
Confidence 445556666655543221111234455555566667777777777653
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.79 E-value=17 Score=25.30 Aligned_cols=30 Identities=7% Similarity=-0.107 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhHHHHhhhcc-CChhhHHH
Q 023849 107 SSAFMVGLLVASPIFASLARSV-NPFRLIGV 136 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~ 136 (276)
.+.=.++..+.....||+.||| |-++..++
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglI 78 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 4444555666667789999996 55544433
No 296
>PRK02237 hypothetical protein; Provisional
Probab=75.30 E-value=11 Score=26.21 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS 151 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 151 (276)
..|-+.+.|.-.+++.++++++..|+.-+-+.=.+|..+..++..+..+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 47888999999999999999999999988777788888777777655443
No 297
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=74.87 E-value=31 Score=32.60 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHH
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~ 231 (276)
+.++.+.-.++.|+|.........-+-.+-.|++.+....+++.....+|.++.-.+..+=. ..-|---+.+.+++.++
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVV 643 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHH
Confidence 34444555667777777777777777788899999999999999999999888777655443 23333334444444444
Q ss_pred HHHHHH
Q 023849 232 FAVLGF 237 (276)
Q Consensus 232 ~~~~~~ 237 (276)
++++.+
T Consensus 644 ~~~f~~ 649 (654)
T TIGR00926 644 MAIFSI 649 (654)
T ss_pred HHHHHH
Confidence 444433
No 298
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=70.54 E-value=71 Score=27.69 Aligned_cols=15 Identities=7% Similarity=0.005 Sum_probs=7.7
Q ss_pred HHHHHhHHHHhhhcc
Q 023849 114 LLVASPIFASLARSV 128 (276)
Q Consensus 114 ~~i~~~~~g~l~d~~ 128 (276)
-++.....|++..|+
T Consensus 8 ~i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 8 PIFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHHh
Confidence 344445555665554
No 299
>COG2119 Predicted membrane protein [Function unknown]
Probab=70.16 E-value=47 Score=25.70 Aligned_cols=75 Identities=12% Similarity=0.052 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhhhhcccccCCCCCCCCCCCCCCCCCccccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCCh
Q 023849 52 VIFCFINLLNYVDRGTIASNGVNGSPKNCSANGTCTPGTGIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF 131 (276)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr 131 (276)
......+....-|.+.++.. .+..+++.......=......++.+++-+.+.++++|+..|
T Consensus 104 ~tfi~~FlaE~GDKTQiATI-------------------aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r 164 (190)
T COG2119 104 TTFITFFLAELGDKTQIATI-------------------ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPER 164 (190)
T ss_pred HHHHHHHHHHhccHHHHHHH-------------------HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHH
Confidence 33444555566777777652 45566665322221123334456677778888999999999
Q ss_pred hhHHHHHHHHHHHH
Q 023849 132 RLIGVGLTVWTLAV 145 (276)
Q Consensus 132 ~~~~~~~~~~~~~~ 145 (276)
.+-.++.+++.+..
T Consensus 165 ~l~~~aallFl~fa 178 (190)
T COG2119 165 LLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHH
Confidence 98887766665543
No 300
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=69.55 E-value=80 Score=27.85 Aligned_cols=123 Identities=17% Similarity=0.079 Sum_probs=66.2
Q ss_pred HHHHHHHHhHHHHhhhccCChhhHHHHHHHHHH------HHHHHhhhh------hHHHHHHHHHHHHhhhh--hhhhcHH
Q 023849 111 MVGLLVASPIFASLARSVNPFRLIGVGLTVWTL------AVVGCGFSF------SFWMIAICRMLVGVGEA--SFISLAA 176 (276)
Q Consensus 111 ~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~------~~~~~~~~~------~~~~~~~~r~l~G~~~~--~~~~~~~ 176 (276)
.....+..++.|...|+..|++++...+++--+ +.++..+.+ ++..+..+-++.-...+ -....+.
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG 152 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344567778889999999999998776655332 233333332 44444444333222211 1111111
Q ss_pred HHH--hhcC-------cchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHH
Q 023849 177 PFI--DDNA-------PVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFA 233 (276)
Q Consensus 177 ~~i--~~~~-------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~ 233 (276)
.++ -||. ++.......+..-..-..-..+.|.+.|.+. ..+-|......++.+.+..
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm 219 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSM 219 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHH
Confidence 111 1221 2223333334444444556678888888887 6677776666666666643
No 301
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=69.22 E-value=33 Score=25.48 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhHHHHhhhccCChh
Q 023849 107 SSAFMVGLLVASPIFASLARSVNPFR 132 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~grr~ 132 (276)
..-|.+++.+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45677888899999999999988764
No 302
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=68.66 E-value=21 Score=24.86 Aligned_cols=43 Identities=19% Similarity=0.106 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHH
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA 144 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~ 144 (276)
..+.......++..++..+.+.+.|..|.+..+.+...+..+.
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 3456666777777777888888887777666655554444433
No 303
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=68.12 E-value=63 Score=28.56 Aligned_cols=56 Identities=11% Similarity=0.014 Sum_probs=45.4
Q ss_pred HHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 159 ICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 159 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
....+.+...-..+...++..++..||..-|+.|.+.++..++|.---..+..++.
T Consensus 374 ~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~ 429 (510)
T KOG3574|consen 374 TSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLA 429 (510)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 34566666667777888889999999999999999999999999877666665554
No 304
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=67.74 E-value=1.1e+02 Score=29.39 Aligned_cols=54 Identities=17% Similarity=0.220 Sum_probs=34.1
Q ss_pred HHHHhhhcc----CChhhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHhhhhhhhh
Q 023849 120 IFASLARSV----NPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 120 ~~g~l~d~~----grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~ 173 (276)
+++-+.|.= ||.+-++++.++++++.+...+.. ..+.+..+.++.+++.+....
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344466643 556777888888887777666554 455666667777776555433
No 305
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=67.24 E-value=1.3e+02 Score=29.30 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=19.0
Q ss_pred hhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHH
Q 023849 200 PSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFP 231 (276)
Q Consensus 200 ~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~ 231 (276)
.++.++..+++.++. ..+|..++++.++++..
T Consensus 111 ~lT~livAL~a~~Li~GL~~~~ALLLGAILAPT 143 (810)
T TIGR00844 111 TSGWLVIALFVWILVPGLNFPASLLMGACITAT 143 (810)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcCC
Confidence 344444444444453 67788888877776643
No 306
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=66.22 E-value=26 Score=28.71 Aligned_cols=20 Identities=10% Similarity=0.011 Sum_probs=7.5
Q ss_pred HhHHHHHHHHHHHHhhcccc
Q 023849 224 GEAILMFPFAVLGFVMKPLQ 243 (276)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~ 243 (276)
+..++.++..++..+.+++.
T Consensus 120 ~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 120 IGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHHHHheeeecCCC
Confidence 33333333333333334443
No 307
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=65.69 E-value=1e+02 Score=27.78 Aligned_cols=33 Identities=12% Similarity=-0.046 Sum_probs=21.9
Q ss_pred CChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 023849 129 NPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICR 161 (276)
Q Consensus 129 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 161 (276)
|.|+......+.+.++.+..++..++....+.-
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~ 371 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFVQS 371 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 334445555566778888899888877665443
No 308
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=65.47 E-value=51 Score=26.94 Aligned_cols=32 Identities=16% Similarity=0.028 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 151 SFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 151 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
+.|...+...-+..|+.... ....-......|
T Consensus 31 S~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP 62 (249)
T PF10225_consen 31 SRSVLFYYSSGISLGVLASL--LILLFQLSKLLP 62 (249)
T ss_pred ccChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc
Confidence 34444444444444443222 222334566666
No 309
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=63.14 E-value=91 Score=29.88 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=32.9
Q ss_pred HHHhhhcc----CChhhHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhhhhhhhh
Q 023849 121 FASLARSV----NPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 121 ~g~l~d~~----grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
++-++|.= ||.+-+.++.+++.++.+...+. +..+.+..+.++.+++.++...
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga 100 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGA 100 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 34566643 56666777777777766655544 4556666677777766555433
No 310
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=62.69 E-value=7 Score=32.05 Aligned_cols=54 Identities=19% Similarity=0.098 Sum_probs=35.8
Q ss_pred hhhhHHHHHHHHHhhhhhhHH--HHHHH-hhc---ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 186 AKKTAWLGVFYMCLPSGYAIG--YVYGG-WVG---HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 186 ~~r~~~~~~~~~~~~~g~~~g--~~~~~-~l~---~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
++|+....+...+.++|.++. |.+-+ -.. ...|++++.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666666777788888774 33322 111 4469999999998887766666655
No 311
>COG4769 Predicted membrane protein [Function unknown]
Probab=60.58 E-value=34 Score=25.87 Aligned_cols=52 Identities=17% Similarity=0.246 Sum_probs=35.3
Q ss_pred HHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhh
Q 023849 110 FMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVG 167 (276)
Q Consensus 110 ~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 167 (276)
+.+...+.+...=++..++|+|..-.++...+ -++.+|..++++.+++.|-.
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~ 133 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcc
Confidence 34445566666667788899888755554433 34678888888888887643
No 312
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=60.46 E-value=41 Score=26.07 Aligned_cols=24 Identities=17% Similarity=0.549 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhHHHHhhhccCC
Q 023849 107 SSAFMVGLLVASPIFASLARSVNP 130 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~gr 130 (276)
..-|.+++.+++.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 355677888999999999999875
No 313
>COG3462 Predicted membrane protein [Function unknown]
Probab=58.49 E-value=6.4 Score=27.17 Aligned_cols=13 Identities=15% Similarity=-0.105 Sum_probs=5.0
Q ss_pred HhHHHHHHHHHHH
Q 023849 224 GEAILMFPFAVLG 236 (276)
Q Consensus 224 ~~~~~~~~~~~~~ 236 (276)
+.+++.++.+++.
T Consensus 55 I~~~vvli~lvvf 67 (117)
T COG3462 55 IFWAVVLIFLVVF 67 (117)
T ss_pred HHHHHHHHHHHHH
Confidence 3344333333333
No 314
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=58.30 E-value=5.2 Score=28.98 Aligned_cols=21 Identities=14% Similarity=0.309 Sum_probs=10.3
Q ss_pred hHHHHHhHHHHHHHHHHHHhh
Q 023849 219 RYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~ 239 (276)
||++++..++.++++++++++
T Consensus 1 RW~l~~iii~~i~l~~~~~~~ 21 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFYC 21 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHHH
Confidence 566665555444444444333
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=56.06 E-value=26 Score=26.23 Aligned_cols=50 Identities=10% Similarity=0.180 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhH
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAI 205 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 205 (276)
++..++...++.|+| ...+.+.+++-..++++-|..+|+-.+-.+++.+.
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 344444444444433 23345667777888898999999888887776654
No 316
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=55.46 E-value=1.3e+02 Score=25.58 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 154 FWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 154 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
...+.++-++.|++.+....-....-.|.+. -..+...=++......|...||+++..+.
T Consensus 208 l~aF~isa~~AGiAGaL~a~~~~~v~p~~f~-~~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~ 267 (314)
T COG4177 208 LLAFVISAAIAGIAGALYALYLGFVSPESFS-FTLSIEVLAMVVLGGAGTLFGALLGAVLV 267 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhceeChhhcc-HHHHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 4456666777777644432222222233333 22333333444555667788888887765
No 317
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=55.22 E-value=1.6e+02 Score=26.49 Aligned_cols=98 Identities=8% Similarity=-0.162 Sum_probs=58.1
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF---SFWMIAICRMLVGVG 167 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~ 167 (276)
-+....|++.++...+.+.-.+...++.++--....+.|-|-....+.....++.++..... .....+.+-+..|+.
T Consensus 39 ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~ 118 (451)
T COG2233 39 LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLV 118 (451)
T ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 34577899999999999999999999988876644445556665555555555554433332 244444444444444
Q ss_pred hhhhhhcHHHHHhhcCcchhh
Q 023849 168 EASFISLAAPFIDDNAPVAKK 188 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~~r 188 (276)
.-...+.....+.+.+||---
T Consensus 119 ~~li~~~~~~~l~rlfPPvVt 139 (451)
T COG2233 119 YFLISPIVKIRLARLFPPVVT 139 (451)
T ss_pred HHHHHHHHHHHHHHhCCCceE
Confidence 333322222255555555443
No 318
>PRK14230 camphor resistance protein CrcB; Provisional
Probab=54.94 E-value=75 Score=22.64 Aligned_cols=48 Identities=10% Similarity=-0.042 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
..++..+++++.++......---.|.+.+.|.-+.++.-.++..|...
T Consensus 36 Tl~VNi~GsfllG~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~ 83 (119)
T PRK14230 36 NLFANWTGALLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVT 83 (119)
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHhchHhhHHHHHHHHHH
Confidence 345556666666554322110113444555555556666667666654
No 319
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=50.72 E-value=1.2e+02 Score=28.23 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHH
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLA 144 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~ 144 (276)
.|+..-++.+|...|.-+..-+.+ .|-+.. .++.+++.+.
T Consensus 452 ~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~-~~g~~~~~~~ 491 (562)
T TIGR03802 452 LGLALFIAVVGLSAGPQAVTAIKE-MGLTLF-LLGIVVTILP 491 (562)
T ss_pred HhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHH
Confidence 455555555666666555555532 343333 3344444333
No 320
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=48.62 E-value=91 Score=21.74 Aligned_cols=59 Identities=7% Similarity=0.062 Sum_probs=34.2
Q ss_pred HHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHhhhhhhhhc
Q 023849 116 VASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSF-SFWMIAICRMLVGVGEASFISL 174 (276)
Q Consensus 116 i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~ 174 (276)
+..-..-+.+|.+.|+...+...+...+++.+.+.+- +.+.=.+--+-.|+|..+....
T Consensus 15 V~~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~ 74 (106)
T COG2076 15 VVGTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALV 74 (106)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 4444555778888888887777777777766666553 3333333334445554443333
No 321
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=48.59 E-value=1.9e+02 Score=25.46 Aligned_cols=97 Identities=12% Similarity=-0.084 Sum_probs=59.5
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHhhhhhhh
Q 023849 94 GDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG-FSFSFWMIAICRMLVGVGEASFI 172 (276)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~~~~~ 172 (276)
+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....+...... ....+.....+-++.|+..-...
T Consensus 21 ~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~illg 100 (406)
T TIGR03173 21 GALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILLA 100 (406)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 44688888888888888888888888765333357777776665555444333222 22345555555666665543333
Q ss_pred hcHHHHHhhcCcchhhhHH
Q 023849 173 SLAAPFIDDNAPVAKKTAW 191 (276)
Q Consensus 173 ~~~~~~i~~~~~~~~r~~~ 191 (276)
.....+.+.+|+.-.|..
T Consensus 101 -~~~~~l~~~iPp~v~G~~ 118 (406)
T TIGR03173 101 -PFFSKLVRFFPPVVTGTV 118 (406)
T ss_pred -HHHHHHHHHCCcHHHHHH
Confidence 355667888887665543
No 322
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=48.30 E-value=1.6e+02 Score=24.56 Aligned_cols=57 Identities=12% Similarity=0.089 Sum_probs=33.4
Q ss_pred HHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 157 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.-..|.+.|+-.- .+...++++.-+||.+++--..--...+..+..++.|++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888887653 33556888888888554322222223334444555666666665
No 323
>TIGR03727 urea_t_UrtC_arc urea ABC transporter, permease protein UrtC, archaeal type. Members of this protein family are ABC transporter permease subunits restricted to the Archaea. Several lines of evidence suggest this protein is functionally analogous, as well as homologous, to the UrtC subunit of the Corynebacterium glutamicum urea transporter. All members of the operon show sequence similarity to urea transport subunits, the gene is located near the urease structural subunits in two of three species, and partial phylogenetic profiling identifies this permease subunit as closely matching the profile of urea utilization.
Probab=47.64 E-value=1.2e+02 Score=26.42 Aligned_cols=17 Identities=6% Similarity=-0.193 Sum_probs=10.2
Q ss_pred HhhhhhhHHHHHHHhhc
Q 023849 198 CLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 198 ~~~~g~~~g~~~~~~l~ 214 (276)
....|...|+++++.+.
T Consensus 282 lGG~gs~~G~i~Ga~ll 298 (364)
T TIGR03727 282 LGGRESLLGAIVATVAI 298 (364)
T ss_pred cCCCCchHHHHHHHHHH
Confidence 34556666777766554
No 324
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=47.27 E-value=64 Score=19.59 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=23.0
Q ss_pred hhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 200 PSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 200 ~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
-+|.++|.+.+.... .+++.....+..+++++..++..
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 356666666555555 67777776666666655555444
No 325
>PRK10692 hypothetical protein; Provisional
Probab=46.18 E-value=77 Score=21.07 Aligned_cols=18 Identities=17% Similarity=0.006 Sum_probs=10.4
Q ss_pred ChhhHHHHHHHHHHHHHH
Q 023849 130 PFRLIGVGLTVWTLAVVG 147 (276)
Q Consensus 130 rr~~~~~~~~~~~~~~~~ 147 (276)
||....+|.+++.++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 555666666666655543
No 326
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=45.33 E-value=65 Score=19.11 Aligned_cols=33 Identities=3% Similarity=-0.121 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhHHHHhhhc-cCChhhHHHHHHHH
Q 023849 109 AFMVGLLVASPIFASLARS-VNPFRLIGVGLTVW 141 (276)
Q Consensus 109 ~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~ 141 (276)
...++.++.....|+..|+ ++.++...+..++.
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ll 41 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLL 41 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 3444555666777877775 67655544433333
No 327
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=44.04 E-value=1.6e+02 Score=23.13 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=22.5
Q ss_pred chhhhHHHHHHHHHhhhhhhHHHHHHHhhc
Q 023849 185 VAKKTAWLGVFYMCLPSGYAIGYVYGGWVG 214 (276)
Q Consensus 185 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 214 (276)
.++.+++.++.-.+..+|.++|..+..++.
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~ 165 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLP 165 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 355677777777777888888888877775
No 328
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=42.93 E-value=3.2e+02 Score=26.38 Aligned_cols=129 Identities=8% Similarity=-0.005 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhHHHHhhhcc---CChh---hHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHhhhhhhhhcHHHHHhh
Q 023849 109 AFMVGLLVASPIFASLARSV---NPFR---LIGVGLTVWTLAVVGCGFSFSFWMIAIC-RMLVGVGEASFISLAAPFIDD 181 (276)
Q Consensus 109 ~~~~~~~i~~~~~g~l~d~~---grr~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~~~~~~~~~~~~i~~ 181 (276)
...+-..+++++.-.+.|+. ..+. ++.+++++..+.-.++.+..++.....+ |.=.++...... -...+=..
T Consensus 165 ~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~-hll~Lpl~ 243 (709)
T COG2274 165 LLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFR-HLLRLPLS 243 (709)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHcCcHH
Confidence 33444556777788889985 2222 3344445555555556666665554444 333334322221 12222344
Q ss_pred cCcchhhhHHHHHHHHHhhhhhhHH----------HH---HHHhhcccchhHHHHHhHHHHHHHHHHHHh
Q 023849 182 NAPVAKKTAWLGVFYMCLPSGYAIG----------YV---YGGWVGHYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 182 ~~~~~~r~~~~~~~~~~~~~g~~~g----------~~---~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
+++.+.-|-..+-..-...+=.++. +. ....+..++|..++.+.+...+..++..++
T Consensus 244 ~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~ 313 (709)
T COG2274 244 YFEKRSVGEIISRVRELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIF 313 (709)
T ss_pred HccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555554444433333222221 11 111222567777666665554444443333
No 329
>PRK03818 putative transporter; Validated
Probab=42.25 E-value=2.6e+02 Score=26.00 Aligned_cols=79 Identities=13% Similarity=0.096 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHhhhhhhhhcHHHHHhh
Q 023849 103 DGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS-FSFWMIAICRMLVGVGEASFISLAAPFIDD 181 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 181 (276)
.|+..-++.+|.-.|.-+..-+.+..|.+.. .++.++..+..++..+. ....-+-..+.+-.++.+...+...+++.|
T Consensus 437 ~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~~ 515 (552)
T PRK03818 437 LGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFANN 515 (552)
T ss_pred HhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHhc
Confidence 4555555555555555555554444555443 34444444433332222 221112222333334444555656666666
Q ss_pred c
Q 023849 182 N 182 (276)
Q Consensus 182 ~ 182 (276)
.
T Consensus 516 ~ 516 (552)
T PRK03818 516 L 516 (552)
T ss_pred c
Confidence 4
No 330
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=41.85 E-value=71 Score=18.55 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=19.0
Q ss_pred hhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHHHH
Q 023849 201 SGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVLGF 237 (276)
Q Consensus 201 ~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~ 237 (276)
+|+.+|..+.+.+. ..++.+.-++.+++..+.++.++
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 45555555555544 34445555565665555444433
No 331
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=41.75 E-value=1.6e+02 Score=22.72 Aligned_cols=59 Identities=8% Similarity=-0.014 Sum_probs=30.8
Q ss_pred hhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhcccchhHHHHHhHHH
Q 023849 169 ASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVGHYNWRYAFWGEAIL 228 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~~~~~~~ 228 (276)
+.-.....+.+.+..|+++|.++.-+-..+..+-.++.-.++.++.+. |.|..++.|++
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~-~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI-FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 445556677788889987776554332222222333333444444422 35555555553
No 332
>PRK11715 inner membrane protein; Provisional
Probab=40.89 E-value=2.7e+02 Score=24.99 Aligned_cols=63 Identities=11% Similarity=0.126 Sum_probs=35.2
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLG 193 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 193 (276)
|+++-..+++|+.+...-.++.+++.....-.+-- +.. .........|+.-.....+||..++
T Consensus 328 ~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~~AYl-iAa---~a~v~li~~Y~~~vl~~~k~g~~~~ 390 (436)
T PRK11715 328 RIHPVQYLLVGLALVLFYLLLLSLSEHIGFTLAYL-IAA---LACVLLIGFYLSAVLRSWKRGLLFA 390 (436)
T ss_pred eecHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHH-HHH---HHHHHHHHHHHHHHHhcchHHHHHH
Confidence 34555567788888887778888887543322222 111 1112223445666666677766554
No 333
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=40.75 E-value=31 Score=23.80 Aligned_cols=49 Identities=18% Similarity=0.064 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHh
Q 023849 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCG 149 (276)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~ 149 (276)
...|-..+.|.-.+++.++++++..|+.-+-+.=.+|..+..++..+..
T Consensus 55 ~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil 103 (109)
T COG1742 55 AAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVIL 103 (109)
T ss_pred hhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeE
Confidence 3467778888888999999999999998777777777766666654443
No 334
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=40.04 E-value=46 Score=23.11 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=22.2
Q ss_pred ccchhHHHHHhHHHHHHHHHHHHhhccccc
Q 023849 215 HYNWRYAFWGEAILMFPFAVLGFVMKPLQL 244 (276)
Q Consensus 215 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (276)
..+|+.+|++...++++.+.+.+.+.|+..
T Consensus 56 ~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 56 WEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999999877777777777676777643
No 335
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.03 E-value=83 Score=21.25 Aligned_cols=27 Identities=19% Similarity=0.282 Sum_probs=16.6
Q ss_pred HHHHHHhhhhhhHHHHHHHhhcccchh
Q 023849 193 GVFYMCLPSGYAIGYVYGGWVGHYNWR 219 (276)
Q Consensus 193 ~~~~~~~~~g~~~g~~~~~~l~~~~w~ 219 (276)
-..+....+|+++|-++|.+....+|.
T Consensus 26 r~~q~ilti~aiVg~i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 26 RFQQLILTIGAIVGFIYGFAQQQLSVT 52 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666667777777666555455553
No 336
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=40.02 E-value=29 Score=21.14 Aligned_cols=24 Identities=25% Similarity=0.346 Sum_probs=17.7
Q ss_pred cchhHHHHHhHHHHHHHHHHHHhh
Q 023849 216 YNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 216 ~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
-|||+...+.++++++.+.+.-..
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~ 26 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIY 26 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhh
Confidence 379999999888887776655443
No 337
>PRK14214 camphor resistance protein CrcB; Provisional
Probab=39.88 E-value=1.4e+02 Score=21.27 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 136 VGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
....+..+++++.++......---.|.+.+.|.-+.++.-.++..|...-
T Consensus 37 gTl~vNv~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 86 (118)
T PRK14214 37 ATFFINITGSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESMEL 86 (118)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHcccchhHHHHHHHHHHH
Confidence 34455666766666544321111235555555556666677777776653
No 338
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=39.72 E-value=2.7e+02 Score=24.67 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=26.9
Q ss_pred HHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH
Q 023849 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (276)
Q Consensus 162 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (276)
++.|+..+........++.+...-++---+.++......+|.++.++++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 3445444444444444455555444444566777777667766665554
No 339
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=39.67 E-value=1.4e+02 Score=21.49 Aligned_cols=49 Identities=20% Similarity=0.223 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
...+..+++++.++...+..- --.|.+.+.|.-+.++.-.++..|...-
T Consensus 40 Tl~VN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~~l 93 (127)
T PRK14200 40 TLTVNVVGSFIMGLLIAAFENELLATEPWRQIIGLGFLGALTTFSTFSMDNVLL 93 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 344556666655554322110 0135555556666666777777776653
No 340
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=39.55 E-value=1.4e+02 Score=21.49 Aligned_cols=50 Identities=16% Similarity=0.177 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 136 VGLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
....+..+++++.++...+..- --.|.+.+.|.-+.++.-.++..|...-
T Consensus 39 gTl~VNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~~l 93 (128)
T PRK14199 39 GTLIVNIVGALLIGFIMEFSMDTALISSNMKLFLTTGIMGGLTTFSTFSYETINL 93 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHHhcccccHHHHHHHHHHH
Confidence 3445556666666554322100 0134455555556667777777776653
No 341
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=39.49 E-value=77 Score=25.39 Aligned_cols=37 Identities=14% Similarity=0.005 Sum_probs=18.1
Q ss_pred hhhHHHHHHHhhc--ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 202 GYAIGYVYGGWVG--HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 202 g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
|.++++++.+.+. .+++.|.+.+.+++..+++..+.|
T Consensus 33 ~a~l~~~~v~v~ig~l~~~~~~~~i~gi~~g~l~am~vl 71 (224)
T PF13829_consen 33 GAFLGPIAVFVLIGLLFGSWWYWLIIGILLGLLAAMIVL 71 (224)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 4444444433333 334556666766665544444443
No 342
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=38.95 E-value=2.9e+02 Score=24.76 Aligned_cols=63 Identities=13% Similarity=0.168 Sum_probs=35.7
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLG 193 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 193 (276)
|+++-..+++|+.+...-.++.+++.......+ ..+.. .........|+.-....++|+..++
T Consensus 322 ~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F~~A-YliAa---~a~i~Li~~Y~~~vl~~~k~~~~~~ 384 (430)
T PF06123_consen 322 RIHPIQYLLVGLALVLFYLLLLSLSEHIGFNLA-YLIAA---LACIGLISLYLSSVLKSWKRGLIFA 384 (430)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhchHHH-HHHHH---HHHHHHHHHHHHHHHhcchHHHHHH
Confidence 455556678888888887788888875433222 22221 1222233455666666667765544
No 343
>PLN02776 prenyltransferase
Probab=38.64 E-value=2.6e+02 Score=24.15 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=9.1
Q ss_pred hhhhhHH--HHHHHhhc
Q 023849 200 PSGYAIG--YVYGGWVG 214 (276)
Q Consensus 200 ~~g~~~g--~~~~~~l~ 214 (276)
.+|.+.| |++.||..
T Consensus 128 ~lG~~~Ga~ppL~Gw~A 144 (341)
T PLN02776 128 WVGAVVGAIPPLMGWAA 144 (341)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 4455555 66777766
No 344
>PRK14220 camphor resistance protein CrcB; Provisional
Probab=38.61 E-value=1.4e+02 Score=21.21 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
...+..+++++.++......---.|.+.+.|.-+.++.-.++..|...
T Consensus 38 Tl~VNi~GsfllG~l~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 85 (120)
T PRK14220 38 TLLINLTGAFILGLIFGRKFNPFIYALLGTGVLGGYTTFSTLNTELVS 85 (120)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHccccccHHHHHHHHHH
Confidence 345556666666554422111124455556666666666777777654
No 345
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=37.98 E-value=1e+02 Score=19.20 Aligned_cols=35 Identities=11% Similarity=-0.020 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhh
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKK 188 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 188 (276)
++..+.......++..+.... ...+++|..+.+++
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~-l~G~isE~i~~~Kg 61 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLF-LAGLISEFISKQKG 61 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccC
Confidence 444455555444454444433 35677787776444
No 346
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=37.87 E-value=1.4e+02 Score=20.65 Aligned_cols=34 Identities=18% Similarity=0.438 Sum_probs=17.4
Q ss_pred HHHHHhhhhhhHHHHHHHhhc-ccc----hhHHHHHhHH
Q 023849 194 VFYMCLPSGYAIGYVYGGWVG-HYN----WRYAFWGEAI 227 (276)
Q Consensus 194 ~~~~~~~~g~~~g~~~~~~l~-~~~----w~~~~~~~~~ 227 (276)
.......+..++|..+|-++. .++ |..++++.|+
T Consensus 47 ~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 47 LIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 333444444455666666776 333 4455555444
No 347
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=37.45 E-value=1.9e+02 Score=22.11 Aligned_cols=80 Identities=15% Similarity=0.014 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHhhhhhhhhcHHHHH
Q 023849 101 FQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFS-FWMIAICRMLVGVGEASFISLAAPFI 179 (276)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~l~G~~~~~~~~~~~~~i 179 (276)
.+.++..-++.+|.-.+.-+..-+.+. |-|. +..+.++..+..+....... +--+-.....-.+..+...+......
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHHH
Confidence 456777778888888887777666555 5443 44444444444443332222 11111122222233344555666666
Q ss_pred hhc
Q 023849 180 DDN 182 (276)
Q Consensus 180 ~~~ 182 (276)
.|.
T Consensus 134 ~~~ 136 (169)
T PF06826_consen 134 QEA 136 (169)
T ss_pred HHh
Confidence 776
No 348
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=36.48 E-value=1e+02 Score=20.38 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=10.0
Q ss_pred ChhhHHHHHHHHHHHHHH
Q 023849 130 PFRLIGVGLTVWTLAVVG 147 (276)
Q Consensus 130 rr~~~~~~~~~~~~~~~~ 147 (276)
||....+|..++.++.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 455556666665555443
No 349
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=36.44 E-value=1.5e+02 Score=27.19 Aligned_cols=16 Identities=13% Similarity=-0.072 Sum_probs=7.4
Q ss_pred HHHHHHHHHHhhhhhh
Q 023849 156 MIAICRMLVGVGEASF 171 (276)
Q Consensus 156 ~~~~~r~l~G~~~~~~ 171 (276)
.+++..++.|+..|-.
T Consensus 301 ~~i~~y~~~~~iaGy~ 316 (521)
T PF02990_consen 301 AAIILYALTSFIAGYV 316 (521)
T ss_pred HHHHHHHHHhhHHHHH
Confidence 3444455555544433
No 350
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=36.43 E-value=3.4e+02 Score=24.85 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=47.4
Q ss_pred HHHHhhhhhhhhcHHHHHhhcCcc-hhhhHHHHHHHHHhhhh-hhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHH
Q 023849 162 MLVGVGEASFISLAAPFIDDNAPV-AKKTAWLGVFYMCLPSG-YAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 162 ~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~ 235 (276)
..-|++.......--+-+.+.+|. +++...+|-++...++- .++.-..++-+. ..||-+.-.+.-++.++..++
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~l 368 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 445555555555555667777774 45778888887776666 334555666666 889988777666665555433
No 351
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=36.37 E-value=75 Score=27.38 Aligned_cols=44 Identities=27% Similarity=0.286 Sum_probs=37.4
Q ss_pred CchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHH
Q 023849 99 NNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWT 142 (276)
Q Consensus 99 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~ 142 (276)
.-..++.+...+.++.++.+.+.|.++.++||-.....+.+.-.
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l 351 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHL 351 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHH
Confidence 45577889999999999999999999999999998887765543
No 352
>PRK04972 putative transporter; Provisional
Probab=34.96 E-value=3.7e+02 Score=25.03 Aligned_cols=25 Identities=24% Similarity=0.367 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 102 QDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 102 ~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
+.++..-+|.+|.-.|.-++.-+-+
T Consensus 63 ~~gl~lF~~~vG~~~Gp~F~~~l~~ 87 (558)
T PRK04972 63 NLGFMLFIFCVGVEAGPNFFSIFFR 87 (558)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 4555566666666666655554433
No 353
>PRK04972 putative transporter; Provisional
Probab=34.88 E-value=3.4e+02 Score=25.24 Aligned_cols=16 Identities=31% Similarity=0.233 Sum_probs=7.3
Q ss_pred hhhhhcHHHHHhhcCc
Q 023849 169 ASFISLAAPFIDDNAP 184 (276)
Q Consensus 169 ~~~~~~~~~~i~~~~~ 184 (276)
+...+....++.|..+
T Consensus 512 ~~t~~~~l~~~~~~~~ 527 (558)
T PRK04972 512 ARTCAPAMEIISDTAR 527 (558)
T ss_pred CCCCcHHHHHHHhhcC
Confidence 3334444445555444
No 354
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=34.46 E-value=3.6e+02 Score=25.70 Aligned_cols=28 Identities=18% Similarity=-0.145 Sum_probs=13.7
Q ss_pred HhHHHHhhhccCChhhHHHHHHHHHHHH
Q 023849 118 SPIFASLARSVNPFRLIGVGLTVWTLAV 145 (276)
Q Consensus 118 ~~~~g~l~d~~grr~~~~~~~~~~~~~~ 145 (276)
++....+..+..||...+...+..++..
T Consensus 387 ~~~~~~~l~~~s~rs~i~~~g~~~~~~~ 414 (700)
T COG1480 387 SFSALVLLRKMSRRSDILKSGLFLALMN 414 (700)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 3344445555566655555444444433
No 355
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=34.43 E-value=1.4e+02 Score=19.85 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=30.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHhHHHHhhhccCC-------hhhHHHHHHHHHHHHHHHhhhhh
Q 023849 98 LNNFQDGVLSSAFMVGLLVASPIFASLARSVNP-------FRLIGVGLTVWTLAVVGCGFSFS 153 (276)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr-------r~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
+..++.+... +.....+..+++..|..+ ++.+..+.++...+.++++...+
T Consensus 20 ~R~sDy~~~a-----~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 20 FRPSDYAIWA-----GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred CCHHHHHHHH-----HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3455554433 334555666777776654 66777777777666666665544
No 356
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=34.12 E-value=2.3e+02 Score=22.24 Aligned_cols=23 Identities=22% Similarity=0.128 Sum_probs=10.6
Q ss_pred chhHHHHHhHHHHHHHHHHHHhh
Q 023849 217 NWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 217 ~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
+.+...++..+++++...+-+++
T Consensus 175 np~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 175 NPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred CcCCCHHHHHHHHHHHHHHHHHH
Confidence 33434444444444445544444
No 357
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=33.94 E-value=1.7e+02 Score=20.78 Aligned_cols=49 Identities=12% Similarity=0.062 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
...+..+++++.++......---.|.+.+.|.-+.++.-.++..|...-
T Consensus 36 Tl~VN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 84 (120)
T PRK14232 36 TFIINITGAILLGIVSSSNISKNMYLLLGDGFLGAYTTFSTFMYEGFNL 84 (120)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 3445566666655543211101134444555555666667777776653
No 358
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=33.92 E-value=62 Score=20.85 Aligned_cols=31 Identities=6% Similarity=-0.044 Sum_probs=22.6
Q ss_pred hhhccCChhhHHHHHHHHHHHHHHHhhhhhH
Q 023849 124 LARSVNPFRLIGVGLTVWTLAVVGCGFSFSF 154 (276)
Q Consensus 124 l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~ 154 (276)
--|+-.|++-+.+.+.+-..++++..+....
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3466678888888888877777777766654
No 359
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=33.66 E-value=1.4e+02 Score=19.76 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=34.6
Q ss_pred HhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHH
Q 023849 165 GVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAIL 228 (276)
Q Consensus 165 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~ 228 (276)
|+|-=...|..+.++.|..=.. .--|.......+|..+|.+....+. +...+..+....+.
T Consensus 5 GigRFayTplLP~M~~~~~ls~---~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSL---SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3433345566677776653322 2235666667778888887777776 44444444444333
No 360
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=33.57 E-value=3.2e+02 Score=23.69 Aligned_cols=105 Identities=12% Similarity=0.091 Sum_probs=55.5
Q ss_pred HHHhHHHHhhhccCChhhHHHHHHHHH---HHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcch-hhhHH
Q 023849 116 VASPIFASLARSVNPFRLIGVGLTVWT---LAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA-KKTAW 191 (276)
Q Consensus 116 i~~~~~g~l~d~~grr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~r~~~ 191 (276)
+-.++.+++.+.+|.-+.+..+.++.. .-.+...+++|.......-.+.|.-.|....-.....-...+++ ++-.+
T Consensus 61 ~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaLgii~k~D~~y~a 140 (354)
T PF04346_consen 61 FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVALGIIEKEDHKYLA 140 (354)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhhhhcChhhhHHHH
Confidence 445667788889999999888777753 23345566777777666666666555544333323333333333 33333
Q ss_pred HHHHHHHhhhhhhHHHHHHHhhcccchhHHH
Q 023849 192 LGVFYMCLPSGYAIGYVYGGWVGHYNWRYAF 222 (276)
Q Consensus 192 ~~~~~~~~~~g~~~g~~~~~~l~~~~w~~~~ 222 (276)
.|+... -+..-+|-++++.+...++...+
T Consensus 141 ~Gil~G--iitIPiG~~vggl~~g~~~~~il 169 (354)
T PF04346_consen 141 KGILAG--IITIPIGCFVGGLIAGFDIGMIL 169 (354)
T ss_pred HHHHHH--HhhhCHHHHHHHHHHhCCHHHHH
Confidence 343322 22223344444444434444333
No 361
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=33.31 E-value=78 Score=20.98 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=16.6
Q ss_pred hhHHHHHhHHHHHHHHHHHHhhc
Q 023849 218 WRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 218 w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
-|+..++.+++-++|++.+.+..
T Consensus 22 lRYGLf~GAIFQliCilAiI~~~ 44 (85)
T PF06783_consen 22 LRYGLFVGAIFQLICILAIILPI 44 (85)
T ss_pred HHHHHHHHHHHHHHHHHheeeec
Confidence 47778888888877776665543
No 362
>PRK14228 camphor resistance protein CrcB; Provisional
Probab=33.03 E-value=1.8e+02 Score=20.75 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
...+..+++++.++...+..---.|.+.+.|.-+.++.-.++..|...-
T Consensus 40 Tl~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 88 (122)
T PRK14228 40 TLAVNVSGAALLGFLAGLALPKDAALLAGTAFVGAYTTFSTWMLETQRL 88 (122)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHhcchhhHHHHHHHHHHH
Confidence 3445566666666543221111134444555555566667777776653
No 363
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=32.36 E-value=1.6e+02 Score=19.76 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 153 SFWMIAICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 153 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
--+-++++|.+.|-+.+..-........|.-|.
T Consensus 30 it~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~pl 62 (89)
T PF04550_consen 30 ITLRLFIGRVILGSAVSVVAGAALIQFPDLPPL 62 (89)
T ss_pred CchhHHhHHHHHhhHHHHHHHHHHhcCCCCCHH
Confidence 345688899999988777766666555666553
No 364
>PRK10720 uracil transporter; Provisional
Probab=32.09 E-value=3.7e+02 Score=23.99 Aligned_cols=12 Identities=17% Similarity=0.111 Sum_probs=5.3
Q ss_pred ChhhHHHHHHHH
Q 023849 130 PFRLIGVGLTVW 141 (276)
Q Consensus 130 rr~~~~~~~~~~ 141 (276)
.|++..++..+.
T Consensus 301 sr~v~~~a~~~l 312 (428)
T PRK10720 301 STWVIGGAAIIA 312 (428)
T ss_pred hhHHHHHHHHHH
Confidence 355545444333
No 365
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=32.01 E-value=1.1e+02 Score=25.21 Aligned_cols=14 Identities=14% Similarity=-0.062 Sum_probs=6.0
Q ss_pred CCchhHHHHHHHHH
Q 023849 98 LNNFQDGVLSSAFM 111 (276)
Q Consensus 98 ~~~~~~~~~~~~~~ 111 (276)
-+.....++.+-+.
T Consensus 215 as~~~ldYvFs~f~ 228 (254)
T PF07857_consen 215 ASQNGLDYVFSHFS 228 (254)
T ss_pred CCCcchheeHHHHh
Confidence 34444444444433
No 366
>PRK10457 hypothetical protein; Provisional
Probab=31.71 E-value=1.5e+02 Score=19.48 Aligned_cols=36 Identities=11% Similarity=0.105 Sum_probs=17.1
Q ss_pred hhhhhhHHHHHHHhhc---ccchhHHHHHhHHHHHHHHH
Q 023849 199 LPSGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAV 234 (276)
Q Consensus 199 ~~~g~~~g~~~~~~l~---~~~w~~~~~~~~~~~~~~~~ 234 (276)
..+|..+|..+...+. ..++.+.-++.+++..+.++
T Consensus 36 GiiGA~iGg~l~~~~g~~~~~g~~~~~~i~aviGAiill 74 (82)
T PRK10457 36 GIVGAVVGGWISTFFGFGKVDGFNFGSFVVAVIGAIVVL 74 (82)
T ss_pred HHHHHHHHHHHHHHhCccccccccHHHHHHHHHHHHHHH
Confidence 3456666666655554 23343333444444433333
No 367
>COG5202 Predicted membrane protein [Function unknown]
Probab=31.68 E-value=3.5e+02 Score=23.55 Aligned_cols=99 Identities=12% Similarity=0.147 Sum_probs=55.2
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHHHhhhhhhhhcHHHHHhhcC---------cchhhhHHHHHHH
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAIC-RMLVGVGEASFISLAAPFIDDNA---------PVAKKTAWLGVFY 196 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~l~G~~~~~~~~~~~~~i~~~~---------~~~~r~~~~~~~~ 196 (276)
+-|.|+.+...+.-++++.+..+..+.+..-++. .+.+-++-- ..-.+.-.+ |.++.=-..|++.
T Consensus 345 kkgkkpgF~stl~Tf~iSA~WHGi~pgYyltF~s~a~~qt~~K~-----~rR~~rpfFlr~d~~tp~p~k~~ydv~g~~a 419 (512)
T COG5202 345 KKGKKPGFWSTLGTFAISALWHGINPGYYLTFLSLAASQTIVKE-----NRRLLRPFFLREDGVTPLPSKSLYDVLGRIA 419 (512)
T ss_pred ecCCCcchHHHHHHHHHHHHHccCCchHHHHHHHHHHHhHHHHH-----HHhhcCcccccccCCCCCchhHHHHHHHHHH
Confidence 4588999888888899999999988877654433 222222110 011111112 2223334455555
Q ss_pred HHhhhhhhHHHHHHHhhc--ccchhHHHHHhHHHHH
Q 023849 197 MCLPSGYAIGYVYGGWVG--HYNWRYAFWGEAILMF 230 (276)
Q Consensus 197 ~~~~~g~~~g~~~~~~l~--~~~w~~~~~~~~~~~~ 230 (276)
+-...+..+.+.+.--+. ..-|+.+|...=++.+
T Consensus 420 ~~l~~~Y~~~sF~lL~lk~s~~VW~svYF~vHI~~a 455 (512)
T COG5202 420 MLLLTTYFSASFFLLSLKDSMYVWRSVYFAVHIFLA 455 (512)
T ss_pred HHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHH
Confidence 555555555554433333 4579998887766543
No 368
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=31.67 E-value=83 Score=26.75 Aligned_cols=25 Identities=28% Similarity=0.526 Sum_probs=17.1
Q ss_pred cchhHHHHHhHHHHHHHHHHHHhhc
Q 023849 216 YNWRYAFWGEAILMFPFAVLGFVMK 240 (276)
Q Consensus 216 ~~w~~~~~~~~~~~~~~~~~~~~~~ 240 (276)
..|++.|++..++.++++++.+++.
T Consensus 292 l~~~~Gy~~~l~~m~~~~~~~~~~f 316 (322)
T COG0598 292 LDWPYGYPIALILMLLLALLLYLYF 316 (322)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHH
Confidence 4688888887777666666555543
No 369
>PTZ00370 STEVOR; Provisional
Probab=31.59 E-value=2.4e+02 Score=23.64 Aligned_cols=13 Identities=23% Similarity=0.026 Sum_probs=5.2
Q ss_pred chhHHHHHhHHHH
Q 023849 217 NWRYAFWGEAILM 229 (276)
Q Consensus 217 ~w~~~~~~~~~~~ 229 (276)
.|-.+-++.-+++
T Consensus 256 Pygiaalvllil~ 268 (296)
T PTZ00370 256 PYGIAALVLLILA 268 (296)
T ss_pred ccHHHHHHHHHHH
Confidence 3433334443443
No 370
>PRK14211 camphor resistance protein CrcB; Provisional
Probab=31.38 E-value=1.9e+02 Score=20.39 Aligned_cols=47 Identities=13% Similarity=0.056 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 138 LTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
..+..+++++.++......---.|.+.+.|..+.++.-.++..|...
T Consensus 35 l~vN~~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 81 (114)
T PRK14211 35 FLVNVAGCLILGLLSGASLSTQTFALLGTGFCGGLTTYSTFAVESVG 81 (114)
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHhhcCCcCcHHHHHHHHHH
Confidence 44456666666654322111113455555555666666777777654
No 371
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.81 E-value=1.8e+02 Score=20.03 Aligned_cols=29 Identities=0% Similarity=-0.275 Sum_probs=15.4
Q ss_pred HHHHHHhHHHHhhh-ccCChhhHHHHHHHH
Q 023849 113 GLLVASPIFASLAR-SVNPFRLIGVGLTVW 141 (276)
Q Consensus 113 ~~~i~~~~~g~l~d-~~grr~~~~~~~~~~ 141 (276)
.-.+.+.+.|...| +++-++.+.+.+++.
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 34455556666667 467655444443333
No 372
>COG5547 Small integral membrane protein [Function unknown]
Probab=30.80 E-value=1.3e+02 Score=18.29 Aligned_cols=39 Identities=26% Similarity=0.180 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhh
Q 023849 132 RLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEAS 170 (276)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~ 170 (276)
+.++.+++...++.++..+----..+++.-.+.|++.|.
T Consensus 9 ypIIgglvglliAili~t~GfwKtilviil~~lGv~iGl 47 (62)
T COG5547 9 YPIIGGLVGLLIAILILTFGFWKTILVIILILLGVYIGL 47 (62)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444443322223344444555555443
No 373
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=30.45 E-value=1.4e+02 Score=25.05 Aligned_cols=24 Identities=25% Similarity=0.509 Sum_probs=14.1
Q ss_pred cchhHHHHHhHHHHHHHHHHHHhh
Q 023849 216 YNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 216 ~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
..|.+.|++..++.+++.++.+++
T Consensus 288 l~~~~gy~~~l~~m~~i~~~~~~~ 311 (318)
T TIGR00383 288 LNWKYGYPAVLIVMAVIALGPLIY 311 (318)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHH
Confidence 358888876665555555444433
No 374
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=30.10 E-value=4.2e+02 Score=24.01 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=19.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCC
Q 023849 97 DLNNFQDGVLSSAFMVGLLVASPIFASLARSVNP 130 (276)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr 130 (276)
++.+-.+-|...++.++.+++..+..+...|.|.
T Consensus 17 ~iG~~~I~~YGl~ialGil~a~~l~~r~~kr~g~ 50 (460)
T PRK13108 17 YLGPLPVRAYAVCVITGIIVALLIGDRRLTARGG 50 (460)
T ss_pred EeccccHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3334445555555566666666666667777664
No 375
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=29.60 E-value=2.7e+02 Score=21.56 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 108 SAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 108 ~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
-...+...+++++.=.+..|.++|..+.+...+.++..++++. .+...+.-++.|+
T Consensus 35 ~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G~---~~~~~~~~iv~gl 90 (186)
T PF09605_consen 35 FMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMGH---GWPMLIVCIVGGL 90 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHH
Confidence 3344556677777788899999999988877777776655543 2444555555554
No 376
>PRK09546 zntB zinc transporter; Reviewed
Probab=29.50 E-value=1.3e+02 Score=25.47 Aligned_cols=29 Identities=17% Similarity=0.254 Sum_probs=16.4
Q ss_pred HHHHhhc-c------cchhHHHHHhHHHHHHHHHHH
Q 023849 208 VYGGWVG-H------YNWRYAFWGEAILMFPFAVLG 236 (276)
Q Consensus 208 ~~~~~l~-~------~~w~~~~~~~~~~~~~~~~~~ 236 (276)
+++|+.. + ..|++.|++..++.+++.+..
T Consensus 279 ~IaGiyGMNf~~mPel~~~~gy~~~l~im~~i~~~~ 314 (324)
T PRK09546 279 FLTGLFGVNLGGIPGGGWPFGFSIFCLLLVVLIGGV 314 (324)
T ss_pred HHHhhhccccCCCCCcCCcchHHHHHHHHHHHHHHH
Confidence 4556655 3 358888876655544444433
No 377
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=29.19 E-value=2.7e+02 Score=21.57 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHh
Q 023849 109 AFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGV 166 (276)
Q Consensus 109 ~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~ 166 (276)
...+...+++++.=.+..|.+|+-.+.+-.++.++..++.+ +.+...+.-++.|+
T Consensus 38 ~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G---~~~~~~~~~ii~gl 92 (189)
T TIGR02185 38 SPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLLFFLMG---MYWPMIISSIIGGL 92 (189)
T ss_pred HHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHH
Confidence 34555667777777889999999988887777777555443 34555555555554
No 378
>PRK14205 camphor resistance protein CrcB; Provisional
Probab=29.01 E-value=2.1e+02 Score=20.26 Aligned_cols=50 Identities=10% Similarity=0.097 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcch
Q 023849 137 GLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVA 186 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 186 (276)
..++..+++++.++......---.|.+.+.|.-+.++.-.++..|...--
T Consensus 37 T~~vNv~GsfllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l~ 86 (118)
T PRK14205 37 TFLINITGAFLLGYIIGNGVTTGWQLLLGTGFMGAFTTFSTFKLESVQLL 86 (118)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHhhhccccccHHHHHHHHHHHH
Confidence 34455666666554432211111344555555566677777777776543
No 379
>PF14851 FAM176: FAM176 family
Probab=28.21 E-value=1.3e+02 Score=22.50 Aligned_cols=29 Identities=14% Similarity=0.022 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHhhhhhhhhcHHHHHhhcC
Q 023849 155 WMIAICRMLVGVGEASFISLAAPFIDDNA 183 (276)
Q Consensus 155 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 183 (276)
+--+++.|+.|++.|+...++...+--.+
T Consensus 19 PE~~aLYFv~gVC~GLlLtLcllV~risc 47 (153)
T PF14851_consen 19 PERFALYFVSGVCAGLLLTLCLLVIRISC 47 (153)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 33455555666666666555554443333
No 380
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=28.17 E-value=1.8e+02 Score=19.15 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=23.6
Q ss_pred hhhhHHHHHHHhhc---ccchhHHHHHhHHHHHHHHHHHHh
Q 023849 201 SGYAIGYVYGGWVG---HYNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 201 ~g~~~g~~~~~~l~---~~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
+...++++++..+. -.||...|++.+-.+++..+++.+
T Consensus 24 vsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi~ 64 (81)
T PF13937_consen 24 VSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILIF 64 (81)
T ss_pred HHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHHH
Confidence 33344566666664 468888888877666555554444
No 381
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=28.14 E-value=2.3e+02 Score=20.36 Aligned_cols=48 Identities=17% Similarity=0.059 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-------HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-------AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-------~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
...+..+++++.++...+..- --.|.+.+.|..+.++.-.++..|.+.
T Consensus 36 Tl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 90 (127)
T PRK14206 36 TLVINVSGSFLIGFFATLTGPEGRVFVGESWRLFVMVGVCGGFTTFSSFSLQTLN 90 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHHHHccccccHHHHHHHHHH
Confidence 345566677666655432110 114445566666666777777777765
No 382
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=27.87 E-value=3.1e+02 Score=23.00 Aligned_cols=96 Identities=7% Similarity=0.036 Sum_probs=53.2
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHHHHhHHH-HhhhccCChhhHHHHHHHHHHHHHHHhh-hhhHHH-HHHHHHHHHhh
Q 023849 91 GIQGDFDLNNFQDGVLSSAFMVGLLVASPIFA-SLARSVNPFRLIGVGLTVWTLAVVGCGF-SFSFWM-IAICRMLVGVG 167 (276)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~l~d~~grr~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~r~l~G~~ 167 (276)
++..+.+.+.+..+++-.+..+..+.-+.... .--++...|..+..|..+...+.....+ -+++.. .++..++.|++
T Consensus 227 fviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIGIA 306 (412)
T KOG4830|consen 227 FVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIA 306 (412)
T ss_pred EEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHHHH
Confidence 44566676666666665555544443333222 1122333444556666665554443333 334433 33456778999
Q ss_pred hhhhhhcHHHHHhhcCcch
Q 023849 168 EASFISLAAPFIDDNAPVA 186 (276)
Q Consensus 168 ~~~~~~~~~~~i~~~~~~~ 186 (276)
.+.......++.++...++
T Consensus 307 nAimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 307 NAIMLVTSLSITAVLINKN 325 (412)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9988887777777766544
No 383
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=27.67 E-value=65 Score=26.47 Aligned_cols=33 Identities=12% Similarity=-0.065 Sum_probs=20.8
Q ss_pred HHHHHhHHHHhhhccCChhhHHHHHHHHHHHHH
Q 023849 114 LLVASPIFASLARSVNPFRLIGVGLTVWTLAVV 146 (276)
Q Consensus 114 ~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~ 146 (276)
..+.-+-+-+++.|+.-|.+.++|..++.+..+
T Consensus 253 T~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl 285 (294)
T KOG2881|consen 253 TGLAVIGGKYLASKISVRTVTLIGGILFIIFGL 285 (294)
T ss_pred HHHHHhhhHHHhhhheeEEEEEecchhHHHHHH
Confidence 333333344667888888888877766665533
No 384
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=27.64 E-value=2.6e+02 Score=20.83 Aligned_cols=51 Identities=8% Similarity=0.178 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 023849 108 SAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLV 164 (276)
Q Consensus 108 ~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 164 (276)
-.+.++..+.+...=.+..|..||+.-.++..+ .-+.+||..|+++..++.
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 455566667777777777787766654444333 234567777777766553
No 385
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=27.21 E-value=3.6e+02 Score=23.60 Aligned_cols=94 Identities=12% Similarity=-0.026 Sum_probs=41.6
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhh------hhhHHHHHHHHHHHHhhh
Q 023849 95 DFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGF------SFSFWMIAICRMLVGVGE 168 (276)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~r~l~G~~~ 168 (276)
.+|. ..+...+.+...+...++.++-+. +.|.|..+.-|.....+....... ...+......-++.|+..
T Consensus 28 ~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~~ 103 (389)
T PF00860_consen 28 AFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGILF 103 (389)
T ss_dssp ------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHHH
T ss_pred cccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHHH
Confidence 3466 455557777777888888888887 667776666555444444322222 234445555555556544
Q ss_pred hhhhhcH-HHHHhhcCcchhhhHHH
Q 023849 169 ASFISLA-APFIDDNAPVAKKTAWL 192 (276)
Q Consensus 169 ~~~~~~~-~~~i~~~~~~~~r~~~~ 192 (276)
-...... ...+.+++|+.-++...
T Consensus 104 ~~l~~~g~~~~l~~~~pp~v~g~v~ 128 (389)
T PF00860_consen 104 ILLGLTGLRKRLRRLFPPVVKGAVV 128 (389)
T ss_dssp HHHHTT-SH-HHHHH--HHHHHHHH
T ss_pred HHHHHhchHHHHHHHhChhheEeeE
Confidence 3332222 23677788877665443
No 386
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.99 E-value=1.6e+02 Score=26.51 Aligned_cols=31 Identities=26% Similarity=0.267 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhh----cc-CChhh
Q 023849 103 DGVLSSAFMVGLLVASPIFASLAR----SV-NPFRL 133 (276)
Q Consensus 103 ~~~~~~~~~~~~~i~~~~~g~l~d----~~-grr~~ 133 (276)
-|-+.+...+.+++.+++.|+.+. |. |||++
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wi 360 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRRWI 360 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHHHH
Confidence 456666677777788877777754 33 55554
No 387
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=26.59 E-value=4.6e+02 Score=23.26 Aligned_cols=97 Identities=10% Similarity=-0.102 Sum_probs=53.4
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHhhhhhh
Q 023849 93 QGDFDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVG-CGFSFSFWMIAICRMLVGVGEASF 171 (276)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~G~~~~~~ 171 (276)
.... +++.+...+.+...+...++.++-+....+. -|.....|.....+...+ .....++......-++.|+.....
T Consensus 30 ~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl~~~ll 107 (415)
T TIGR00801 30 GLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGLVYTLL 107 (415)
T ss_pred hccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 3445 7888899999999999999999988776654 122222222211122221 112223444444445555444433
Q ss_pred hhc----HHHHHhhcCcchhhhHH
Q 023849 172 ISL----AAPFIDDNAPVAKKTAW 191 (276)
Q Consensus 172 ~~~----~~~~i~~~~~~~~r~~~ 191 (276)
... ...++.+.+|+.-.+..
T Consensus 108 ~~~~~~~~~~~i~~~~Pp~v~g~i 131 (415)
T TIGR00801 108 SLLIKKLGPRWLMKLFPPVVTGPV 131 (415)
T ss_pred HHHHHHhhHHHHHhcCCchhHHHh
Confidence 221 23355778888877653
No 388
>PF09911 DUF2140: Uncharacterized protein conserved in bacteria (DUF2140); InterPro: IPR018672 This family of conserved hypothetical proteins has no known function.
Probab=26.59 E-value=45 Score=25.90 Aligned_cols=19 Identities=26% Similarity=0.578 Sum_probs=12.6
Q ss_pred chhHHHHHhHHHHHHHHHH
Q 023849 217 NWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 217 ~w~~~~~~~~~~~~~~~~~ 235 (276)
-|+|.|++...+.++..+.
T Consensus 2 ~WK~aF~~Lla~~l~~~~~ 20 (187)
T PF09911_consen 2 WWKWAFLILLALNLAFVIV 20 (187)
T ss_pred hHHHHHHHHHHHHHHHHhh
Confidence 4999999876654444433
No 389
>PRK14222 camphor resistance protein CrcB; Provisional
Probab=26.31 E-value=2.5e+02 Score=20.10 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
...+..+++++.++......- --.|.+.+.|..+.++.-.++..|.+.
T Consensus 37 Tl~vN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~~ 89 (124)
T PRK14222 37 TLAVNVIGAFLIGLIMEFSLRSTLIPPTLRIGLTIGFLGGLTTFSTFSYETFR 89 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 445566677766654432110 013444555555666777777777764
No 390
>PRK14219 camphor resistance protein CrcB; Provisional
Probab=26.16 E-value=2.6e+02 Score=20.28 Aligned_cols=48 Identities=8% Similarity=-0.006 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
.+.+..++++++++...+..- --.|.+.+.|..+.++.-.++..|...
T Consensus 36 Tl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~~ 88 (132)
T PRK14219 36 TLLINLAGCFLLAWLTTYIAKLNILPSDVITGIGTGFIGSFTTFSTFSVETIQ 88 (132)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHccchhhHHHHHHHHHH
Confidence 344556666666554322110 013444455555556666677776654
No 391
>COG3619 Predicted membrane protein [Function unknown]
Probab=25.99 E-value=3.5e+02 Score=21.79 Aligned_cols=31 Identities=10% Similarity=0.083 Sum_probs=17.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHHHhhhccCC
Q 023849 100 NFQDGVLSSAFMVGLLVASPIFASLARSVNP 130 (276)
Q Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr 130 (276)
+...........+..++|......+..|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3344555666666666775555555555554
No 392
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=25.63 E-value=2.6e+02 Score=20.15 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
..++..+++++.++......- --.|.+.+.|.-+.++.-.++..|...-
T Consensus 37 Tl~vN~~GsfllG~~~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~E~~~l 90 (128)
T PRK14212 37 TLIVNCLGCFVLGFLMQWGFSSDSHNTHLKLMLTAGFLGAFTTFSTFSYETLDC 90 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhhHhcCcccHHHHHHHHHHH
Confidence 345556666666654322110 1134455555556666777777776653
No 393
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=25.48 E-value=6.1e+02 Score=24.37 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=24.0
Q ss_pred cCChhhHHHHHHHHHHHHHHHh-h-hhhHHHHHHHHHHHHhhhhhhhh
Q 023849 128 VNPFRLIGVGLTVWTLAVVGCG-F-SFSFWMIAICRMLVGVGEASFIS 173 (276)
Q Consensus 128 ~grr~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~r~l~G~~~~~~~~ 173 (276)
+|.|+..-+|.+...++..... . .++-+.=-..|+..|+..|....
T Consensus 1 ig~n~l~~iG~~~l~lG~~fl~kya~~~g~l~p~~Rv~~g~~~g~~l~ 48 (745)
T PF10101_consen 1 IGGNWLVRIGILVLLLGVVFLLKYAIDAGWLGPAVRVALGAALGLALL 48 (745)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHcCcCCHHHHHHHHHHHHHHHH
Confidence 3556666666666655554332 1 22223334567777766655433
No 394
>PRK14227 camphor resistance protein CrcB; Provisional
Probab=25.31 E-value=2.6e+02 Score=20.01 Aligned_cols=49 Identities=16% Similarity=0.255 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
...+..+++++.++...+..- --.|.+.+.|.-+.++.-.++..|...-
T Consensus 37 Tl~vN~~GsfllG~~~~~~~~~~~~~~~~~l~l~tGf~GgfTTFSTf~~E~~~l 90 (124)
T PRK14227 37 TLIVNSVGSFILSFFMILFLEKLSLDPLWRLFVAVGFCGSFTTFSSFTYETIAL 90 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhhHhcccccHHHHHHHHHHH
Confidence 344556666665554322110 1134445555566667777777776653
No 395
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=25.30 E-value=8.5e+02 Score=25.98 Aligned_cols=16 Identities=13% Similarity=0.308 Sum_probs=10.3
Q ss_pred HHHHHHhHHHHhhhcc
Q 023849 113 GLLVASPIFASLARSV 128 (276)
Q Consensus 113 ~~~i~~~~~g~l~d~~ 128 (276)
...+...+.|.+.|.+
T Consensus 75 ~~p~~~~i~g~iid~~ 90 (1466)
T PTZ00265 75 TLPFFVSVFGVIMKNM 90 (1466)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444556778888875
No 396
>TIGR00930 2a30 K-Cl cotransporter.
Probab=24.89 E-value=7.3e+02 Score=25.03 Aligned_cols=8 Identities=25% Similarity=0.518 Sum_probs=3.6
Q ss_pred cchhHHHH
Q 023849 216 YNWRYAFW 223 (276)
Q Consensus 216 ~~w~~~~~ 223 (276)
.+|.+..+
T Consensus 517 i~w~~ali 524 (953)
T TIGR00930 517 ISWWAALV 524 (953)
T ss_pred HHHHHHHH
Confidence 35644333
No 397
>PRK14196 chromosome condensation membrane protein; Provisional
Probab=24.70 E-value=2.7e+02 Score=20.01 Aligned_cols=50 Identities=12% Similarity=0.110 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCcc
Q 023849 136 VGLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAPV 185 (276)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 185 (276)
....+..+++++.++...+..- --.|.+.+.|..+.++.-.++..|...-
T Consensus 36 gTl~vN~~GsfllG~l~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~~l 90 (127)
T PRK14196 36 GTLAANLIGGYIIGVAVAWFARMPGLDPEWRLLIITGFCGGLTTFSTFSAEVVTL 90 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHhchhhhHHHHHHHHHHH
Confidence 3445556666666554322110 1134555666666667777777776653
No 398
>KOG2704 consensus Predicted membrane protein [Function unknown]
Probab=24.52 E-value=5.3e+02 Score=23.30 Aligned_cols=28 Identities=14% Similarity=0.205 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 023849 134 IGVGLTVWTLAVVGCGFSFSFWMIAICR 161 (276)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r 161 (276)
+.-.+...+++.+..++.+.+...++.-
T Consensus 348 F~~tlaT~~~SAvWHG~~pGYyltF~t~ 375 (480)
T KOG2704|consen 348 FYRTLATFTTSAVWHGLYPGYYLTFLTS 375 (480)
T ss_pred hhhhHHHHHHHHHHcccChHHHHHHHHH
Confidence 4555666788888999998887765543
No 399
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=24.23 E-value=4.1e+02 Score=26.68 Aligned_cols=13 Identities=8% Similarity=0.125 Sum_probs=5.4
Q ss_pred cccccCCCchhHH
Q 023849 92 IQGDFDLNNFQDG 104 (276)
Q Consensus 92 ~~~~~~~~~~~~~ 104 (276)
+...+|++...+|
T Consensus 959 IG~vlGIse~VmG 971 (1096)
T TIGR00927 959 VGETIGISEEIMG 971 (1096)
T ss_pred hhhhcCCChhhhh
Confidence 3334444444333
No 400
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=24.17 E-value=1.9e+02 Score=24.64 Aligned_cols=23 Identities=22% Similarity=0.600 Sum_probs=13.4
Q ss_pred cchhHHHHHhHHHHHHHHHHHHh
Q 023849 216 YNWRYAFWGEAILMFPFAVLGFV 238 (276)
Q Consensus 216 ~~w~~~~~~~~~~~~~~~~~~~~ 238 (276)
..|.+.|++..++.++.+++.++
T Consensus 286 ~~~~~g~~~~l~~~~~~~~~~~~ 308 (316)
T PRK11085 286 LKWSFGYPGAIILMILAGLAPYL 308 (316)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHH
Confidence 45787777666555555443333
No 401
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=24.06 E-value=5.7e+02 Score=24.97 Aligned_cols=45 Identities=18% Similarity=0.082 Sum_probs=24.9
Q ss_pred HHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhh
Q 023849 158 AICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGY 203 (276)
Q Consensus 158 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 203 (276)
++.-.+.|.+.|....++..++..+.. ..-...+|++..++-+++
T Consensus 187 l~~a~~gG~~~Gaa~Gv~~Gli~~l~~-~~~~~~~~~~af~GLlaG 231 (764)
T TIGR02865 187 LLISYIGGSGAGAAGGVVIGVILGLAN-NANLYQIGVFGFAGLLGG 231 (764)
T ss_pred HHHHHhcCchHhHHHHHHHHHHHHhcC-ccHHHHHHHHHHHHHHHH
Confidence 334456666666666666666666553 223345566655554444
No 402
>PRK12847 ubiA 4-hydroxybenzoate polyprenyltransferase; Reviewed
Probab=24.06 E-value=4.2e+02 Score=21.98 Aligned_cols=15 Identities=13% Similarity=0.031 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHH
Q 023849 134 IGVGLTVWTLAVVGC 148 (276)
Q Consensus 134 ~~~~~~~~~~~~~~~ 148 (276)
+.++.++.+++..+.
T Consensus 95 ~~~~~~l~~~~~~l~ 109 (285)
T PRK12847 95 LILLFILLLIALVIL 109 (285)
T ss_pred HHHHHHHHHHHHHHH
Confidence 445555555554443
No 403
>PRK14201 camphor resistance protein CrcB; Provisional
Probab=23.95 E-value=2.7e+02 Score=19.78 Aligned_cols=48 Identities=8% Similarity=-0.016 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
.+++..+++++.++...+..- --.|.+.+.|..+.++.-.++..|...
T Consensus 33 Tl~vN~~G~fllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~E~~~ 85 (121)
T PRK14201 33 TLIANLTGAFLMGLLTALTIAFFSNHPTLKKAITTGFLGALTTFSTFQFELIH 85 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhhccCcccchHHHHHHHH
Confidence 345556666666655432210 013445555555666666777777664
No 404
>PRK14234 camphor resistance protein CrcB; Provisional
Probab=23.88 E-value=2.8e+02 Score=19.86 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
...+..+++++.++...+..- --.|.+.+.|..+.++.-.++..|...
T Consensus 38 Tl~vNi~G~fllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 90 (124)
T PRK14234 38 TLAVNIVGCLLIGLLYGLFLLRPEVPIELRAGLIVGFLGGLTTFSSFSLDTLR 90 (124)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHccccchHHHHHHHHHH
Confidence 344566666666655432211 124555566666666777777777664
No 405
>PRK14231 camphor resistance protein CrcB; Provisional
Probab=23.78 E-value=2.9e+02 Score=19.98 Aligned_cols=48 Identities=17% Similarity=0.128 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
.+++..+++++.++...+..- --.|.+.+.|.-+.++.-.++..|...
T Consensus 33 Tl~vNi~GsfllG~l~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~ 85 (129)
T PRK14231 33 TLAVNLIGCFLLAFLMQFLAEKSRISLVILNGIGTGFIGAFTTFSAFSVDTIQ 85 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHHhcccccHHHHHHHHHH
Confidence 445556666666654322110 013344455555555666666666554
No 406
>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]
Probab=23.62 E-value=91 Score=26.25 Aligned_cols=32 Identities=19% Similarity=0.405 Sum_probs=17.6
Q ss_pred HHHHhhc-ccchhHHHHHhHHHHHHHHHHHHhh
Q 023849 208 VYGGWVG-HYNWRYAFWGEAILMFPFAVLGFVM 239 (276)
Q Consensus 208 ~~~~~l~-~~~w~~~~~~~~~~~~~~~~~~~~~ 239 (276)
.++|-.. ..||..+++-.+.-++++..+.+.+
T Consensus 138 vlgGpav~~~g~~F~l~Pval~SliLv~~a~ly 170 (382)
T COG3448 138 VLGGPAVHRLGYNFVLWPVALNSLILVGLALLY 170 (382)
T ss_pred HhcCcccccCCCCceehhhhhhhHHHHHHHHHH
Confidence 3443444 6788866666555555544444444
No 407
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.59 E-value=98 Score=23.19 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=27.4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhHHHHhhhccCCh
Q 023849 96 FDLNNFQDGVLSSAFMVGLLVASPIFASLARSVNPF 131 (276)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr 131 (276)
+++++ .+.++.+...++..+.++-.|.++-.+...
T Consensus 92 ~dvP~-~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 92 VDVPP-WAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred cccCc-hHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 44443 577888888889889999999998887654
No 408
>PRK10666 ammonium transporter; Provisional
Probab=22.75 E-value=5.6e+02 Score=22.97 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=23.9
Q ss_pred HHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH
Q 023849 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (276)
Q Consensus 162 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (276)
++.|+-.|........++.+...-++---+.++......+|.+...+.+
T Consensus 307 ~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 307 LIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 3444444444443334444434334444456666666666665555443
No 409
>PRK03818 putative transporter; Validated
Probab=22.59 E-value=6.3e+02 Score=23.50 Aligned_cols=18 Identities=17% Similarity=0.289 Sum_probs=8.8
Q ss_pred HHHHHHhHHHHhhhccCC
Q 023849 113 GLLVASPIFASLARSVNP 130 (276)
Q Consensus 113 ~~~i~~~~~g~l~d~~gr 130 (276)
|..+..++.|++..++|.
T Consensus 35 g~L~~gl~~G~~~~~~~~ 52 (552)
T PRK03818 35 GVLFGGIIVGHFVSQFGL 52 (552)
T ss_pred HHHHHHHHHhccccccCc
Confidence 444555555554444443
No 410
>PRK14195 camphor resistance protein CrcB; Provisional
Probab=22.51 E-value=3e+02 Score=19.72 Aligned_cols=48 Identities=19% Similarity=0.059 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhhhhhHHHH-----HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI-----AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~-----~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
...+..+++++.++...+..- --.|.+.+.|..+.++.-.++..|...
T Consensus 37 Tl~vNi~GsfllG~~~~~~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 89 (125)
T PRK14195 37 TLAVNVTGSFLIGVLAGLLAHRWNASQEWRLFLIVGVLGGFTTFSAFSLDAAL 89 (125)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHhHhccCcccHHHHHHHHHH
Confidence 344556666666655432110 013445555666666777777777665
No 411
>PLN02878 homogentisate phytyltransferase
Probab=22.27 E-value=4.7e+02 Score=21.90 Aligned_cols=73 Identities=7% Similarity=0.022 Sum_probs=34.6
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhh
Q 023849 127 SVNPFRLIGVGLTVWTLAVVGCGFSFSFWMIAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLP 200 (276)
Q Consensus 127 ~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 200 (276)
++|+|++..++..+..+.+....+..-.........+..+|..... ...-+=+...+.+.+....+.++..+-
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~i~~g~~~~~~~~~~~~~~~h~~l~-~~L~~rs~~vD~~sk~~i~~fY~fiwk 267 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAAILVGASSSFLWSKIITVLGHGILA-SILWQRAQSVDLSSKAAITSFYMFIWK 267 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHHhHhcCcccHHHHHHHHHHHHH
Confidence 4577888888877777666533332222222223333333333221 111222344444555555566555443
No 412
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=22.23 E-value=5.6e+02 Score=22.76 Aligned_cols=47 Identities=11% Similarity=0.123 Sum_probs=23.3
Q ss_pred HHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHH
Q 023849 163 LVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYG 210 (276)
Q Consensus 163 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 210 (276)
+.|+..+........++ +...-++---+.++...+...|.++.+++.
T Consensus 298 iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 298 LIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 33444344444333333 344444444556666666666666555543
No 413
>PF11677 DUF3273: Protein of unknown function (DUF3273); InterPro: IPR021691 Some members in this family of proteins are annotated as multi-transmembrane proteins however this cannot be confirmed. Currently this family has no known function.
Probab=22.01 E-value=4.6e+02 Score=21.68 Aligned_cols=155 Identities=12% Similarity=0.012 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhh--cc--CC---hhhHHHHHHHHHHHHHHHhhh---------h-----------hHHH
Q 023849 104 GVLSSAFMVGLLVASPIFASLAR--SV--NP---FRLIGVGLTVWTLAVVGCGFS---------F-----------SFWM 156 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d--~~--gr---r~~~~~~~~~~~~~~~~~~~~---------~-----------~~~~ 156 (276)
.....+|.+|...-..+--.+.| |. |- -|.+..+..+-.++..+.-.. . ++..
T Consensus 73 ~~~~~~yliGtl~l~~Fq~l~aDDsk~~RGyRaGsKiL~~At~ld~is~~L~~v~~l~~~~y~~~~W~~~~~~~gs~w~~ 152 (265)
T PF11677_consen 73 AFFSGIYLIGTLYLMSFQVLVADDSKWARGYRAGSKILRQATFLDLISSILRFVFYLYAYYYYSMKWYTKFNQGGSEWIF 152 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCCeEEE
Confidence 44456666676666666566666 22 21 234555555555544432211 0 1224
Q ss_pred HHHHHHHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHHHHHHhhc-ccchhHHHHHhHHHHHHHHHH
Q 023849 157 IAICRMLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGYVYGGWVG-HYNWRYAFWGEAILMFPFAVL 235 (276)
Q Consensus 157 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~w~~~~~~~~~~~~~~~~~ 235 (276)
+..+|++.+++.- .-....+.-|.+..+-.+-..|..+.....-..+.-+++-... .......+.. +++....+
T Consensus 153 f~f~~~~~a~al~--lYG~a~fllEvYhdEGtge~~a~~~~~lF~laG~~el~~~~f~~~g~~~tL~~l---~al~~~t~ 227 (265)
T PF11677_consen 153 FFFGRLLHAFALV--LYGAAFFLLEVYHDEGTGEEYAWINLLLFKLAGLAELLAMVFTGFGAFFTLFLL---LALMAATL 227 (265)
T ss_pred eeHHHHHHHHHHH--HHHHHHHhheeeccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH---HHHHHHHH
Confidence 5667888777533 2333456778888777777777665543333333332311111 2223333333 33333333
Q ss_pred HHh-hcccccCCCCchhhhccccchhhcc
Q 023849 236 GFV-MKPLQLKGFAPAESKKAFTDIEIAF 263 (276)
Q Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (276)
+.+ +-|...+..++-.+.+-.++++.++
T Consensus 228 WA~~FEP~~~~~sp~L~~s~l~ndv~~~~ 256 (265)
T PF11677_consen 228 WAFLFEPLLNKWSPKLHQSALRNDVEPQY 256 (265)
T ss_pred HHHHhhHHhhhcCchhhHHHhhhhhhHHH
Confidence 333 3455555554444444444444443
No 414
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=21.94 E-value=3.1e+02 Score=23.57 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhhccCChhhHHHHHHHHHHHHHHHhhh
Q 023849 104 GVLSSAFMVGLLVASPIFASLARSVNPFRLIGVGLTVWTLAVVGCGFS 151 (276)
Q Consensus 104 ~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 151 (276)
.+.....++|..++..+.+++.|++|....+.++.+.+.++.+.....
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 466677777888888888899999999888888887777776655443
No 415
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=21.81 E-value=3.3e+02 Score=19.99 Aligned_cols=23 Identities=9% Similarity=0.013 Sum_probs=17.5
Q ss_pred HhhcCcchhhhHHHHHHHHHhhh
Q 023849 179 IDDNAPVAKKTAWLGVFYMCLPS 201 (276)
Q Consensus 179 i~~~~~~~~r~~~~~~~~~~~~~ 201 (276)
+.|++|+..|....+.+......
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 57999999998887777655443
No 416
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=21.47 E-value=1.5e+02 Score=15.79 Aligned_cols=20 Identities=25% Similarity=0.242 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHhHHHHhhhc
Q 023849 108 SAFMVGLLVASPIFASLARS 127 (276)
Q Consensus 108 ~~~~~~~~i~~~~~g~l~d~ 127 (276)
+...++.++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 55666777777787877654
No 417
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=21.45 E-value=31 Score=29.05 Aligned_cols=41 Identities=15% Similarity=-0.014 Sum_probs=0.0
Q ss_pred HHHHhhhhhhhhcHHHHHhhcCcchhhhHHHHHHHHHhhhhhhHHH
Q 023849 162 MLVGVGEASFISLAAPFIDDNAPVAKKTAWLGVFYMCLPSGYAIGY 207 (276)
Q Consensus 162 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 207 (276)
++.|++.+.......++.+. +|++. +..+..+.++++++..
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y----~~a~~~Gq~~aGv~~s 45 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY----TQAVMIGQGLAGVIVS 45 (309)
T ss_dssp ----------------------------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH----HHHHHhhccHHHHHHH
Confidence 45666667776666666664 56544 3333444444444443
No 418
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=21.23 E-value=5.5e+02 Score=22.33 Aligned_cols=116 Identities=16% Similarity=0.068 Sum_probs=63.1
Q ss_pred CCCchhHHHHHHHH-----HHHHHHHHhHHHHhhhcc--CChhhHHHHHHHHHHHHHHHhhh--hhH----------HHH
Q 023849 97 DLNNFQDGVLSSAF-----MVGLLVASPIFASLARSV--NPFRLIGVGLTVWTLAVVGCGFS--FSF----------WMI 157 (276)
Q Consensus 97 ~~~~~~~~~~~~~~-----~~~~~i~~~~~g~l~d~~--grr~~~~~~~~~~~~~~~~~~~~--~~~----------~~~ 157 (276)
|.+....+-..+.. .+..+++++++-++.|.. |++..+..+..+.+++.++.... .|+ ..+
T Consensus 154 g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~ 233 (354)
T PF05631_consen 154 GFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSF 233 (354)
T ss_pred CCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHH
Confidence 45555544443322 233445555555667765 45777777777777666554321 111 011
Q ss_pred -----HHH---H-HHHHhhhhhhhhcHHHHHhhcCcchh---hhHHHHHHHHHhhhhhhHHHHHHHh
Q 023849 158 -----AIC---R-MLVGVGEASFISLAAPFIDDNAPVAK---KTAWLGVFYMCLPSGYAIGYVYGGW 212 (276)
Q Consensus 158 -----~~~---r-~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~ 212 (276)
.+. | .+.|+.++......+..+-.|.|.-+ +..=.|+......+...+|..+...
T Consensus 234 ~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 234 REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 111 1 46788888888888888888887433 3333444444444455555544433
No 419
>COG3389 Uncharacterized protein conserved in archaea [Function unknown]
Probab=21.05 E-value=3.8e+02 Score=21.71 Aligned_cols=31 Identities=13% Similarity=0.144 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhHHHHhhhccCChhhHHHH
Q 023849 107 SSAFMVGLLVASPIFASLARSVNPFRLIGVG 137 (276)
Q Consensus 107 ~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~ 137 (276)
.+.+.+++.+....+-.+.-|+||||++-.-
T Consensus 34 ns~yyfv~Il~atlfill~Ik~~~kwI~r~i 64 (277)
T COG3389 34 NSVYYFVYILVATLFILLAIKLGRKWIFRGI 64 (277)
T ss_pred CceeeehhHHHHHHHHHhheeecceeeehhh
Confidence 3455666667777777788899999887553
No 420
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain. This model represents a domain that is duplicated the aspartate-alanine antiporter AspT, as well as HI0035 of Haemophilus influenzae, YidE and YbjL of E. coli, and a number of other known or putative transporters. Member proteins may have 0, 1, or 2 copies of TrkA potassium uptake domain pfam02080 between the duplications. The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=20.35 E-value=3.8e+02 Score=20.07 Aligned_cols=26 Identities=27% Similarity=0.342 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHhhh
Q 023849 101 FQDGVLSSAFMVGLLVASPIFASLAR 126 (276)
Q Consensus 101 ~~~~~~~~~~~~~~~i~~~~~g~l~d 126 (276)
.+.|+..-++.+|.-.+.-+..-+.+
T Consensus 56 ~~~GL~lFl~~vGl~aG~~f~~~l~~ 81 (154)
T TIGR01625 56 REFGLMLFLYGVGLSAGPGFFSSLKD 81 (154)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 35677778888888887777665544
No 421
>PRK14226 camphor resistance protein CrcB; Provisional
Probab=20.23 E-value=3.5e+02 Score=19.59 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhhhhHHHH---------HHHHHHHHhhhhhhhhcHHHHHhhcCc
Q 023849 137 GLTVWTLAVVGCGFSFSFWMI---------AICRMLVGVGEASFISLAAPFIDDNAP 184 (276)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~---------~~~r~l~G~~~~~~~~~~~~~i~~~~~ 184 (276)
.+.+..+++++.++......- --.|.+.+.|.-+.++.-.++..|...
T Consensus 37 Tl~VNv~GsfllG~l~~~~~~~~~~~~~~~~~~~~~l~tGflGgfTTFSTf~~e~~~ 93 (130)
T PRK14226 37 ILLCNIIGSLIIGMMAAFLIETKLFNEDVSTYVRFLLVTGFLGGFTTFSSFSLDILN 93 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHccccccHHHHHHHHHH
Confidence 445566677666654322110 114555566666666777777777664
Done!