Query 023853
Match_columns 276
No_of_seqs 116 out of 1110
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 13:53:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhp_A Malate dehydrogenase; M 100.0 1.1E-62 3.8E-67 448.2 28.2 269 5-276 42-312 (312)
2 4aj2_A L-lactate dehydrogenase 100.0 1.2E-61 3.9E-66 444.4 18.6 255 5-273 60-331 (331)
3 1mld_A Malate dehydrogenase; o 100.0 1.7E-60 6E-65 434.8 25.4 272 5-276 40-312 (314)
4 3p7m_A Malate dehydrogenase; p 100.0 3.9E-60 1.3E-64 433.3 23.2 260 5-276 45-321 (321)
5 3nep_X Malate dehydrogenase; h 100.0 7.8E-61 2.7E-65 436.4 18.6 259 5-275 41-309 (314)
6 3tl2_A Malate dehydrogenase; c 100.0 2.9E-60 9.9E-65 433.0 20.3 253 5-269 50-313 (315)
7 3vku_A L-LDH, L-lactate dehydr 100.0 8.2E-61 2.8E-65 438.0 15.8 253 5-271 50-317 (326)
8 1oju_A MDH, malate dehydrogena 100.0 1.8E-59 6.3E-64 423.9 23.1 246 5-269 41-291 (294)
9 3gvi_A Malate dehydrogenase; N 100.0 1.5E-59 5E-64 429.7 20.4 257 5-272 47-318 (324)
10 3pqe_A L-LDH, L-lactate dehydr 100.0 7.7E-60 2.6E-64 431.9 17.5 252 5-270 46-313 (326)
11 2x0j_A Malate dehydrogenase; o 100.0 2E-59 7E-64 422.9 19.5 246 5-269 41-291 (294)
12 7mdh_A Protein (malate dehydro 100.0 1.9E-58 6.5E-63 427.7 24.5 260 5-274 81-356 (375)
13 1smk_A Malate dehydrogenase, g 100.0 1.5E-57 5E-62 417.5 24.1 270 6-275 49-319 (326)
14 3fi9_A Malate dehydrogenase; s 100.0 4.1E-58 1.4E-62 422.8 18.9 256 5-272 50-319 (343)
15 5mdh_A Malate dehydrogenase; o 100.0 1.7E-57 5.9E-62 417.6 19.8 261 5-275 52-331 (333)
16 2d4a_B Malate dehydrogenase; a 100.0 4.8E-57 1.7E-61 411.0 19.4 258 6-276 40-308 (308)
17 1ez4_A Lactate dehydrogenase; 100.0 4.7E-57 1.6E-61 412.7 19.2 258 5-275 46-316 (318)
18 2zqz_A L-LDH, L-lactate dehydr 100.0 9.7E-57 3.3E-61 411.9 20.1 258 5-275 50-321 (326)
19 4h7p_A Malate dehydrogenase; s 100.0 9.8E-57 3.3E-61 413.5 20.1 255 5-270 73-343 (345)
20 3ldh_A Lactate dehydrogenase; 100.0 6.3E-58 2.2E-62 418.6 10.5 241 5-269 62-327 (330)
21 2xxj_A L-LDH, L-lactate dehydr 100.0 6.1E-56 2.1E-60 404.0 20.6 252 5-270 41-308 (310)
22 3d0o_A L-LDH 1, L-lactate dehy 100.0 6.5E-55 2.2E-59 398.5 19.3 253 6-271 48-314 (317)
23 1y6j_A L-lactate dehydrogenase 100.0 1.6E-54 5.5E-59 396.1 20.3 253 5-271 48-316 (318)
24 1ur5_A Malate dehydrogenase; o 100.0 1.4E-54 4.9E-59 394.9 19.4 255 6-271 43-307 (309)
25 1o6z_A MDH, malate dehydrogena 100.0 5.3E-54 1.8E-58 390.2 22.8 251 6-270 45-302 (303)
26 2i6t_A Ubiquitin-conjugating e 100.0 4.5E-53 1.5E-57 383.9 21.3 243 6-270 55-301 (303)
27 1hye_A L-lactate/malate dehydr 100.0 5.8E-53 2E-57 384.9 21.4 252 6-271 45-311 (313)
28 1ldn_A L-lactate dehydrogenase 100.0 4.7E-53 1.6E-57 386.0 17.9 252 5-270 47-314 (316)
29 1t2d_A LDH-P, L-lactate dehydr 100.0 2.9E-52 9.9E-57 381.7 19.2 253 6-271 45-317 (322)
30 2hjr_A Malate dehydrogenase; m 100.0 1.7E-51 5.7E-56 377.5 21.2 243 18-271 69-324 (328)
31 1guz_A Malate dehydrogenase; o 100.0 1.6E-51 5.6E-56 374.9 20.8 244 19-273 57-308 (310)
32 1pzg_A LDH, lactate dehydrogen 100.0 2.5E-51 8.6E-56 376.8 21.5 245 18-272 64-326 (331)
33 1b8p_A Protein (malate dehydro 100.0 1.8E-50 6.2E-55 370.8 23.9 258 6-274 57-328 (329)
34 2v6b_A L-LDH, L-lactate dehydr 100.0 1.4E-50 4.9E-55 367.7 21.0 246 6-270 42-302 (304)
35 1a5z_A L-lactate dehydrogenase 100.0 2.2E-47 7.7E-52 348.8 24.7 238 20-271 57-308 (319)
36 1hyh_A L-hicdh, L-2-hydroxyiso 100.0 4E-46 1.4E-50 338.9 18.1 235 23-273 61-308 (309)
37 2ewd_A Lactate dehydrogenase,; 100.0 2.2E-45 7.6E-50 335.2 22.6 243 18-271 59-314 (317)
38 1y7t_A Malate dehydrogenase; N 100.0 7.1E-41 2.4E-45 306.5 24.6 258 6-273 54-324 (327)
39 1up7_A 6-phospho-beta-glucosid 100.0 1.5E-39 5.3E-44 306.3 19.1 239 18-272 59-377 (417)
40 1s6y_A 6-phospho-beta-glucosid 100.0 2.3E-38 7.8E-43 301.0 20.1 240 18-271 69-399 (450)
41 1lld_A L-lactate dehydrogenase 100.0 5.3E-37 1.8E-41 279.0 23.4 238 20-270 64-317 (319)
42 1u8x_X Maltose-6'-phosphate gl 100.0 1.5E-36 5.2E-41 289.7 15.6 241 18-270 88-422 (472)
43 3fef_A Putative glucosidase LP 100.0 4.5E-28 1.6E-32 229.6 14.7 232 18-270 61-403 (450)
44 1obb_A Maltase, alpha-glucosid 99.9 3.3E-25 1.1E-29 211.5 18.0 239 17-269 62-432 (480)
45 3u95_A Glycoside hydrolase, fa 99.9 2E-23 6.7E-28 199.7 13.7 114 19-141 63-211 (477)
46 2o3j_A UDP-glucose 6-dehydroge 87.5 0.29 1E-05 46.2 3.0 67 19-86 73-141 (481)
47 4e12_A Diketoreductase; oxidor 87.1 1.4 4.7E-05 38.2 6.9 72 19-111 72-144 (283)
48 3ado_A Lambda-crystallin; L-gu 86.2 0.74 2.5E-05 41.2 4.7 74 16-109 71-144 (319)
49 3ehe_A UDP-glucose 4-epimerase 85.7 1.7 5.6E-05 37.6 6.8 111 24-140 55-172 (313)
50 1dlj_A UDP-glucose dehydrogena 85.5 0.59 2E-05 42.9 3.9 61 20-85 61-122 (402)
51 2dpo_A L-gulonate 3-dehydrogen 84.3 1.4 4.6E-05 39.3 5.6 74 19-113 74-148 (319)
52 1f0y_A HCDH, L-3-hydroxyacyl-C 83.3 1.9 6.4E-05 37.6 6.0 53 19-85 87-140 (302)
53 3gg2_A Sugar dehydrogenase, UD 82.9 1.2 4E-05 41.7 4.7 61 19-85 65-127 (450)
54 3k6j_A Protein F01G10.3, confi 81.6 2.1 7.1E-05 40.2 5.9 49 17-80 116-165 (460)
55 3m2p_A UDP-N-acetylglucosamine 80.8 1.3 4.6E-05 38.2 4.0 56 23-81 53-108 (311)
56 1mv8_A GMD, GDP-mannose 6-dehy 80.1 1.8 6.3E-05 39.9 5.0 72 20-97 64-140 (436)
57 4fgw_A Glycerol-3-phosphate de 77.4 2.6 8.9E-05 38.7 5.0 49 18-82 103-152 (391)
58 3k96_A Glycerol-3-phosphate de 74.9 5.1 0.00018 36.0 6.2 64 19-98 86-150 (356)
59 4id9_A Short-chain dehydrogena 74.2 5.6 0.00019 34.7 6.2 56 25-81 70-125 (347)
60 3g79_A NDP-N-acetyl-D-galactos 73.8 3.8 0.00013 38.6 5.2 64 18-86 88-153 (478)
61 3ko8_A NAD-dependent epimerase 72.2 8.3 0.00028 32.9 6.8 102 26-140 57-171 (312)
62 2wtb_A MFP2, fatty acid multif 72.1 4.1 0.00014 40.4 5.3 71 18-109 378-448 (725)
63 4a7p_A UDP-glucose dehydrogena 71.7 3.9 0.00013 38.1 4.8 62 19-85 71-134 (446)
64 3vtf_A UDP-glucose 6-dehydroge 70.9 10 0.00036 35.3 7.4 74 20-96 85-160 (444)
65 3rft_A Uronate dehydrogenase; 70.6 4.1 0.00014 34.4 4.3 54 25-81 57-110 (267)
66 3e8x_A Putative NAD-dependent 70.4 12 0.00041 30.5 7.2 56 24-82 76-131 (236)
67 3mog_A Probable 3-hydroxybutyr 69.0 4.8 0.00016 37.9 4.7 49 18-81 71-120 (483)
68 2y0c_A BCEC, UDP-glucose dehyd 68.5 4.4 0.00015 38.0 4.4 56 19-80 71-127 (478)
69 3ruf_A WBGU; rossmann fold, UD 67.6 6.3 0.00021 34.4 5.0 108 25-140 93-209 (351)
70 3npg_A Uncharacterized DUF364 67.6 8.9 0.0003 32.8 5.8 92 9-123 140-232 (249)
71 2hun_A 336AA long hypothetical 65.6 5.4 0.00019 34.5 4.2 56 26-81 69-126 (336)
72 3tri_A Pyrroline-5-carboxylate 65.3 22 0.00075 30.4 8.0 51 19-85 50-102 (280)
73 1zcj_A Peroxisomal bifunctiona 63.4 11 0.00038 35.0 6.0 65 23-109 106-171 (463)
74 3pid_A UDP-glucose 6-dehydroge 63.0 9 0.00031 35.5 5.3 62 19-85 96-158 (432)
75 2h1q_A Hypothetical protein; Z 62.6 12 0.00041 32.4 5.7 78 22-124 176-254 (270)
76 4as2_A Phosphorylcholine phosp 62.6 4.8 0.00016 35.9 3.2 49 60-113 147-199 (327)
77 2rcy_A Pyrroline carboxylate r 61.9 8.2 0.00028 32.3 4.5 51 19-85 45-95 (262)
78 2c29_D Dihydroflavonol 4-reduc 61.2 27 0.00092 30.0 7.9 59 23-81 68-127 (337)
79 1y1p_A ARII, aldehyde reductas 60.8 25 0.00087 30.0 7.6 58 24-82 75-132 (342)
80 1oc2_A DTDP-glucose 4,6-dehydr 59.9 6.8 0.00023 34.0 3.7 55 25-81 68-124 (348)
81 4h31_A Otcase, ornithine carba 59.6 8.7 0.0003 34.7 4.4 22 18-39 236-257 (358)
82 3hwr_A 2-dehydropantoate 2-red 59.2 25 0.00086 30.6 7.3 65 19-108 74-139 (318)
83 4h08_A Putative hydrolase; GDS 56.8 29 0.00098 27.3 6.8 50 30-84 72-122 (200)
84 3zwc_A Peroxisomal bifunctiona 56.3 13 0.00045 36.9 5.4 71 17-109 379-450 (742)
85 2q3e_A UDP-glucose 6-dehydroge 56.1 5.9 0.0002 36.9 2.7 67 19-86 69-137 (467)
86 2rh8_A Anthocyanidin reductase 55.1 20 0.0007 30.8 6.0 59 23-81 71-130 (338)
87 1wdk_A Fatty oxidation complex 54.5 11 0.00036 37.3 4.4 44 19-77 381-425 (715)
88 4egb_A DTDP-glucose 4,6-dehydr 54.1 8 0.00027 33.6 3.2 108 25-140 89-208 (346)
89 1sb8_A WBPP; epimerase, 4-epim 54.0 15 0.00053 31.9 5.0 111 25-140 95-211 (352)
90 3dtt_A NADP oxidoreductase; st 53.3 10 0.00035 31.7 3.6 47 23-85 81-128 (245)
91 1kew_A RMLB;, DTDP-D-glucose 4 52.8 11 0.00036 33.0 3.8 56 26-81 65-132 (361)
92 2x4g_A Nucleoside-diphosphate- 52.5 24 0.00082 30.3 6.0 56 25-81 70-125 (342)
93 1x0v_A GPD-C, GPDH-C, glycerol 52.4 15 0.00053 32.2 4.8 51 19-85 77-128 (354)
94 1yj8_A Glycerol-3-phosphate de 51.6 18 0.00061 32.3 5.1 51 19-85 90-145 (375)
95 3d1l_A Putative NADP oxidoredu 51.0 25 0.00085 29.4 5.7 49 20-84 56-105 (266)
96 3dci_A Arylesterase; SGNH_hydr 50.9 24 0.00081 28.7 5.5 52 30-84 99-157 (232)
97 2izz_A Pyrroline-5-carboxylate 50.1 35 0.0012 29.7 6.7 50 20-85 72-122 (322)
98 1rpn_A GDP-mannose 4,6-dehydra 49.3 14 0.00046 31.9 3.8 56 26-81 78-137 (335)
99 3ay3_A NAD-dependent epimerase 49.3 54 0.0018 27.0 7.6 54 25-81 56-109 (267)
100 1eq2_A ADP-L-glycero-D-mannohe 48.7 51 0.0018 27.6 7.5 55 25-81 56-115 (310)
101 1r6d_A TDP-glucose-4,6-dehydra 47.9 21 0.00071 30.7 4.8 56 25-81 69-126 (337)
102 3dhn_A NAD-dependent epimerase 47.6 15 0.00053 29.5 3.7 52 25-81 60-111 (227)
103 3ghy_A Ketopantoate reductase 46.5 19 0.00064 31.6 4.4 48 20-84 59-107 (335)
104 3enk_A UDP-glucose 4-epimerase 46.2 11 0.00038 32.5 2.7 56 25-81 69-128 (341)
105 3l5o_A Uncharacterized protein 46.1 28 0.00097 30.1 5.3 73 25-122 179-252 (270)
106 4b4u_A Bifunctional protein fo 45.9 6.1 0.00021 35.0 1.0 40 4-44 194-234 (303)
107 2bka_A CC3, TAT-interacting pr 45.5 16 0.00056 29.7 3.6 57 24-82 76-132 (242)
108 2ew2_A 2-dehydropantoate 2-red 45.4 35 0.0012 28.9 5.9 59 29-110 71-131 (316)
109 1zej_A HBD-9, 3-hydroxyacyl-CO 45.3 25 0.00085 30.6 4.9 22 18-40 60-81 (293)
110 3sxp_A ADP-L-glycero-D-mannohe 45.2 24 0.0008 30.9 4.8 55 25-81 82-137 (362)
111 3hn2_A 2-dehydropantoate 2-red 45.1 32 0.0011 29.7 5.6 67 19-109 57-124 (312)
112 3b1f_A Putative prephenate deh 44.7 19 0.00066 30.6 4.0 45 22-82 56-102 (290)
113 4huj_A Uncharacterized protein 44.2 18 0.00063 29.6 3.7 44 25-85 74-117 (220)
114 2q0q_A ARYL esterase; SGNH hyd 44.0 30 0.001 27.3 4.9 49 31-83 82-140 (216)
115 2x6t_A ADP-L-glycero-D-manno-h 43.5 65 0.0022 27.8 7.5 54 26-81 104-162 (357)
116 3oj0_A Glutr, glutamyl-tRNA re 43.4 12 0.0004 28.4 2.2 46 21-85 69-114 (144)
117 1jay_A Coenzyme F420H2:NADP+ o 43.4 13 0.00044 30.0 2.6 46 24-85 56-101 (212)
118 2c20_A UDP-glucose 4-epimerase 43.3 17 0.00058 31.1 3.5 55 26-81 59-117 (330)
119 2raf_A Putative dinucleotide-b 42.5 52 0.0018 26.6 6.2 41 29-85 54-94 (209)
120 2c5a_A GDP-mannose-3', 5'-epim 42.2 55 0.0019 28.8 6.8 56 25-81 86-144 (379)
121 2p4h_X Vestitone reductase; NA 42.2 32 0.0011 29.1 5.1 58 24-81 66-124 (322)
122 1es9_A PAF-AH, platelet-activa 41.9 50 0.0017 26.6 6.1 48 31-83 92-139 (232)
123 3r6d_A NAD-dependent epimerase 41.7 27 0.00092 28.0 4.3 42 25-81 66-107 (221)
124 1rkx_A CDP-glucose-4,6-dehydra 41.1 19 0.00064 31.4 3.4 57 26-82 72-132 (357)
125 3i83_A 2-dehydropantoate 2-red 39.8 30 0.001 30.0 4.6 71 19-112 58-130 (320)
126 3h2s_A Putative NADH-flavin re 39.7 32 0.0011 27.4 4.5 47 28-81 58-104 (224)
127 3p2o_A Bifunctional protein fo 39.7 11 0.00038 33.0 1.6 21 23-43 194-214 (285)
128 2c2x_A Methylenetetrahydrofola 38.8 14 0.00049 32.2 2.2 41 4-44 173-215 (281)
129 1gy8_A UDP-galactose 4-epimera 38.8 31 0.0011 30.4 4.6 55 26-81 84-143 (397)
130 3c7a_A Octopine dehydrogenase; 38.5 48 0.0016 29.6 5.9 20 22-41 72-91 (404)
131 2w9x_A AXE2A, CJCE2B, putative 37.9 89 0.0031 27.5 7.5 54 31-84 235-296 (366)
132 2g5c_A Prephenate dehydrogenas 37.5 55 0.0019 27.5 5.8 19 23-41 52-71 (281)
133 3l07_A Bifunctional protein fo 37.3 13 0.00043 32.6 1.6 21 23-43 195-215 (285)
134 1orr_A CDP-tyvelose-2-epimeras 37.1 24 0.00083 30.2 3.5 57 25-81 64-124 (347)
135 1txg_A Glycerol-3-phosphate de 36.8 31 0.001 29.8 4.1 49 20-84 57-107 (335)
136 2a35_A Hypothetical protein PA 36.6 25 0.00086 27.8 3.3 48 33-81 66-113 (215)
137 4a5o_A Bifunctional protein fo 36.4 10 0.00036 33.1 1.0 39 4-43 176-215 (286)
138 1fxw_F Alpha2, platelet-activa 35.7 1.2E+02 0.0042 24.2 7.5 47 31-82 93-139 (229)
139 2x41_A Beta-glucosidase; hydro 35.3 14 0.00048 36.5 1.8 57 29-85 441-504 (721)
140 1gml_A T-complex protein 1 sub 35.0 1.7E+02 0.0057 23.2 10.4 88 29-128 24-122 (178)
141 3oh8_A Nucleoside-diphosphate 34.9 65 0.0022 29.9 6.3 57 25-81 194-253 (516)
142 1uuy_A CNX1, molybdopterin bio 34.1 1.1E+02 0.0037 23.9 6.6 23 31-53 70-93 (167)
143 2hsj_A Putative platelet activ 34.0 1.2E+02 0.0042 23.5 7.1 48 32-83 85-133 (214)
144 2i9x_A Putative septation prot 34.0 68 0.0023 22.7 4.8 41 217-260 39-79 (87)
145 1hdo_A Biliverdin IX beta redu 33.0 85 0.0029 24.2 6.0 51 25-81 60-110 (206)
146 2qyt_A 2-dehydropantoate 2-red 32.4 58 0.002 27.6 5.2 48 21-85 73-121 (317)
147 1b0a_A Protein (fold bifunctio 32.3 12 0.00042 32.7 0.7 40 4-44 174-214 (288)
148 1evy_A Glycerol-3-phosphate de 32.2 38 0.0013 29.8 4.0 22 19-40 72-93 (366)
149 3grf_A Ornithine carbamoyltran 31.9 33 0.0011 30.5 3.5 21 19-39 221-241 (328)
150 3ew7_A LMO0794 protein; Q8Y8U8 31.6 74 0.0025 25.0 5.4 47 28-82 57-103 (221)
151 3dqp_A Oxidoreductase YLBE; al 31.5 24 0.00082 28.3 2.4 51 25-82 56-106 (219)
152 2p5y_A UDP-glucose 4-epimerase 30.8 35 0.0012 28.9 3.4 55 26-81 58-116 (311)
153 3sc6_A DTDP-4-dehydrorhamnose 30.2 34 0.0012 28.5 3.2 55 25-81 47-105 (287)
154 2wao_A Endoglucanase E; plant 30.0 57 0.002 28.4 4.8 52 31-85 212-264 (341)
155 3qha_A Putative oxidoreductase 29.7 82 0.0028 26.8 5.7 47 19-81 58-105 (296)
156 2b0j_A 5,10-methenyltetrahydro 29.5 38 0.0013 29.9 3.3 41 18-69 127-167 (358)
157 2e18_A NH(3)-dependent NAD(+) 29.4 69 0.0023 26.8 5.0 66 59-128 8-77 (257)
158 3dc7_A Putative uncharacterize 29.3 42 0.0014 27.0 3.5 51 31-84 81-139 (232)
159 1z82_A Glycerol-3-phosphate de 29.1 29 0.00099 30.3 2.6 48 19-85 68-115 (335)
160 3gt0_A Pyrroline-5-carboxylate 29.0 35 0.0012 28.3 3.0 21 20-40 51-71 (247)
161 3csu_A Protein (aspartate carb 28.8 28 0.00094 30.8 2.4 22 19-40 208-229 (310)
162 3ngx_A Bifunctional protein fo 28.8 13 0.00044 32.4 0.3 21 23-43 184-204 (276)
163 2pk3_A GDP-6-deoxy-D-LYXO-4-he 28.8 67 0.0023 27.1 4.9 56 26-81 66-125 (321)
164 3gd5_A Otcase, ornithine carba 28.6 25 0.00086 31.2 2.1 22 19-40 212-233 (323)
165 2f1k_A Prephenate dehydrogenas 28.5 97 0.0033 25.8 5.9 43 23-82 49-92 (279)
166 2z1m_A GDP-D-mannose dehydrata 28.3 48 0.0016 28.2 3.9 56 26-81 67-126 (345)
167 2h78_A Hibadh, 3-hydroxyisobut 28.2 53 0.0018 27.9 4.1 23 19-41 46-68 (302)
168 4f2g_A Otcase 1, ornithine car 28.1 32 0.0011 30.3 2.7 21 19-39 203-223 (309)
169 4b8w_A GDP-L-fucose synthase; 27.8 45 0.0015 27.8 3.6 56 25-81 52-112 (319)
170 3pef_A 6-phosphogluconate dehy 27.4 40 0.0014 28.6 3.2 23 19-41 44-66 (287)
171 3slg_A PBGP3 protein; structur 27.2 25 0.00084 30.8 1.8 55 26-82 85-141 (372)
172 4ekn_B Aspartate carbamoyltran 27.1 26 0.00088 30.9 1.9 22 19-40 205-226 (306)
173 1a4i_A Methylenetetrahydrofola 26.8 35 0.0012 30.0 2.7 40 4-44 180-220 (301)
174 4a8t_A Putrescine carbamoyltra 26.5 39 0.0013 30.2 3.0 19 19-38 230-248 (339)
175 4ep1_A Otcase, ornithine carba 26.5 29 0.00099 31.1 2.1 22 19-40 234-255 (340)
176 1bb1_B Designed, thermostable 26.4 93 0.0032 17.5 3.6 21 250-270 8-28 (36)
177 3tw8_B RAS-related protein RAB 26.4 1.4E+02 0.0047 22.2 6.0 49 27-85 76-124 (181)
178 2pzm_A Putative nucleotide sug 26.4 94 0.0032 26.5 5.5 54 26-81 80-135 (330)
179 1y5e_A Molybdenum cofactor bio 26.4 45 0.0015 26.3 3.1 17 28-44 66-84 (169)
180 4dll_A 2-hydroxy-3-oxopropiona 26.3 66 0.0022 27.8 4.4 23 19-41 74-96 (320)
181 3l6d_A Putative oxidoreductase 26.2 46 0.0016 28.6 3.4 22 20-41 53-74 (306)
182 2i6u_A Otcase, ornithine carba 26.0 30 0.001 30.5 2.1 22 19-40 204-225 (307)
183 3zyz_A Beta-D-glucoside glucoh 26.0 20 0.00067 35.5 1.0 90 29-131 424-526 (713)
184 2ia9_A Putative septation prot 25.9 1.1E+02 0.0036 22.3 4.7 41 217-260 39-79 (100)
185 1ofu_X SULA, hypothetical prot 25.8 1.4E+02 0.0048 22.1 5.6 44 61-109 17-63 (119)
186 2yy7_A L-threonine dehydrogena 25.6 25 0.00087 29.7 1.6 56 25-81 59-117 (312)
187 2bll_A Protein YFBG; decarboxy 25.6 45 0.0015 28.5 3.2 55 26-82 61-117 (345)
188 1ml4_A Aspartate transcarbamoy 25.5 29 0.00098 30.6 1.9 22 19-40 208-229 (308)
189 2i9z_A Putative septation prot 25.4 1.1E+02 0.0037 22.5 4.7 36 224-260 44-79 (105)
190 1dxh_A Ornithine carbamoyltran 25.4 33 0.0011 30.6 2.3 22 19-40 211-232 (335)
191 3sds_A Ornithine carbamoyltran 25.2 33 0.0011 30.9 2.2 21 19-39 245-265 (353)
192 1js1_X Transcarbamylase; alpha 25.2 30 0.001 30.7 2.0 23 18-40 215-237 (324)
193 1vlv_A Otcase, ornithine carba 24.9 32 0.0011 30.6 2.1 22 19-40 223-244 (325)
194 1duv_G Octase-1, ornithine tra 24.5 33 0.0011 30.6 2.1 22 19-40 211-232 (333)
195 4amu_A Ornithine carbamoyltran 24.5 34 0.0012 30.9 2.2 21 19-39 238-258 (365)
196 3e48_A Putative nucleoside-dip 24.2 86 0.0029 26.0 4.7 48 25-81 58-105 (289)
197 2gn4_A FLAA1 protein, UDP-GLCN 24.2 1E+02 0.0035 26.7 5.3 56 25-81 84-141 (344)
198 1pvv_A Otcase, ornithine carba 24.1 52 0.0018 29.0 3.3 60 19-84 210-273 (315)
199 3iwt_A 178AA long hypothetical 24.0 42 0.0014 26.5 2.5 39 6-44 46-93 (178)
200 1zq6_A Otcase, ornithine carba 24.0 32 0.0011 31.0 2.0 22 19-40 252-273 (359)
201 1pg5_A Aspartate carbamoyltran 23.8 27 0.00092 30.7 1.4 23 19-41 200-222 (299)
202 3mil_A Isoamyl acetate-hydroly 23.7 1.7E+02 0.0057 23.0 6.3 47 31-82 71-121 (240)
203 1vpd_A Tartronate semialdehyde 23.6 51 0.0017 27.8 3.2 22 20-41 49-70 (299)
204 3kzn_A Aotcase, N-acetylornith 23.6 33 0.0011 30.8 2.0 22 19-40 252-273 (359)
205 2p4q_A 6-phosphogluconate dehy 23.6 1.3E+02 0.0043 28.1 6.1 51 19-84 58-112 (497)
206 3ggo_A Prephenate dehydrogenas 23.5 76 0.0026 27.5 4.3 18 23-40 84-102 (314)
207 3tpf_A Otcase, ornithine carba 23.4 54 0.0018 28.8 3.3 22 19-40 201-222 (307)
208 1n2s_A DTDP-4-, DTDP-glucose o 23.4 62 0.0021 27.0 3.6 55 25-81 45-103 (299)
209 2b69_A UDP-glucuronate decarbo 23.3 1.5E+02 0.0051 25.2 6.2 52 28-81 87-140 (343)
210 2is8_A Molybdopterin biosynthe 23.1 61 0.0021 25.3 3.3 37 8-44 29-74 (164)
211 2w37_A Ornithine carbamoyltran 23.1 36 0.0012 30.7 2.1 22 19-40 232-253 (359)
212 3st7_A Capsular polysaccharide 23.1 11 0.00038 33.2 -1.3 56 24-81 38-93 (369)
213 1vl0_A DTDP-4-dehydrorhamnose 22.8 63 0.0021 26.9 3.5 55 25-81 54-112 (292)
214 2vpt_A Lipolytic enzyme; ester 22.7 2.2E+02 0.0074 22.3 6.8 43 31-81 82-127 (215)
215 3abz_A Beta-glucosidase I; gly 22.7 17 0.00059 36.6 -0.1 56 28-85 569-628 (845)
216 1oth_A Protein (ornithine tran 22.6 37 0.0013 30.1 2.0 22 19-40 210-231 (321)
217 4a26_A Putative C-1-tetrahydro 22.6 23 0.00077 31.2 0.6 39 4-43 180-221 (300)
218 3q98_A Transcarbamylase; rossm 22.5 37 0.0013 31.1 2.1 22 19-40 253-274 (399)
219 2zyd_A 6-phosphogluconate dehy 22.4 1.3E+02 0.0044 27.9 5.8 52 19-85 62-117 (480)
220 2yfk_A Aspartate/ornithine car 22.4 37 0.0013 31.3 2.1 22 19-40 250-271 (418)
221 2ef0_A Ornithine carbamoyltran 22.2 37 0.0013 29.8 2.0 21 20-40 201-221 (301)
222 2qyb_A Membrane protein, putat 22.2 1.7E+02 0.0057 21.8 5.7 44 227-270 110-159 (181)
223 1e6u_A GDP-fucose synthetase; 21.8 1E+02 0.0034 25.9 4.7 56 25-81 46-106 (321)
224 2waa_A Acetyl esterase, xylan 21.8 1E+02 0.0035 26.9 4.8 51 32-85 225-276 (347)
225 2ydy_A Methionine adenosyltran 21.7 56 0.0019 27.6 3.0 56 24-81 50-109 (315)
226 3r7w_B Gtpase2, GTP-binding pr 21.7 1.6E+02 0.0056 26.0 6.1 52 27-86 67-118 (331)
227 1xg5_A ARPG836; short chain de 21.6 1.5E+02 0.0052 24.4 5.8 52 31-82 110-172 (279)
228 3h9u_A Adenosylhomocysteinase; 21.3 80 0.0028 29.2 4.1 44 24-84 258-301 (436)
229 1ks9_A KPA reductase;, 2-dehyd 20.9 81 0.0028 26.2 3.9 45 24-85 56-101 (291)
230 3sdb_A Glutamine-dependent NAD 20.9 91 0.0031 30.5 4.6 70 61-130 349-425 (680)
231 2dkn_A 3-alpha-hydroxysteroid 20.9 2.1E+02 0.0071 22.8 6.4 50 32-82 62-114 (255)
232 2q1s_A Putative nucleotide sug 20.8 67 0.0023 28.1 3.4 110 25-140 92-215 (377)
233 3c85_A Putative glutathione-re 20.7 2.8E+02 0.0097 21.1 8.3 78 30-130 103-180 (183)
234 3c24_A Putative oxidoreductase 20.6 1.2E+02 0.0043 25.3 5.0 43 25-83 60-103 (286)
235 1yqg_A Pyrroline-5-carboxylate 20.5 1.2E+02 0.004 24.9 4.8 21 20-41 46-66 (263)
236 1mkz_A Molybdenum cofactor bio 20.3 41 0.0014 26.6 1.7 38 7-44 35-81 (172)
237 2hrz_A AGR_C_4963P, nucleoside 20.1 66 0.0023 27.5 3.2 57 25-81 78-140 (342)
238 1db3_A GDP-mannose 4,6-dehydra 20.1 98 0.0034 26.6 4.4 56 26-81 70-131 (372)
239 2g2c_A Putative molybdenum cof 20.1 64 0.0022 25.3 2.8 36 9-44 38-81 (167)
240 2w3g_A DOSS, two component sen 20.1 2.3E+02 0.008 19.8 6.8 48 225-272 96-148 (153)
241 4dik_A Flavoprotein; TM0755, e 20.0 3.2E+02 0.011 24.6 7.9 79 58-141 280-362 (410)
No 1
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=100.00 E-value=1.1e-62 Score=448.22 Aligned_cols=269 Identities=53% Similarity=0.829 Sum_probs=237.9
Q ss_pred cccccccCCcc-cccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDVDSR-AVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~-~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+|+++|+..+ .++.+..+++++ +++|||+||+++|.||+|||+|+|++.+|++|++++++.|.+++|+++++++|||
T Consensus 42 ~a~Dl~~~~~~~~v~~~~~~~~~~-~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 120 (312)
T 3hhp_A 42 VAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120 (312)
T ss_dssp HHHHHHTSCSSEEEEEECSSCCHH-HHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred HHHHhhCCCCCceEEEecCCCcHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 47899997542 233222245675 8999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCC-CCCCEEEEeechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChhH
Q 023853 84 VNSTVPIAAEVFKKVGTY-DPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTE 162 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~-~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~~ 162 (276)
+|.+++++++ +++.+|+ |++||||+|.||++||+++||+++|+++++|+++|||||+|++++|+||++ ....+++++
T Consensus 121 vd~~t~~a~~-~~k~sg~~p~~rv~G~~~LD~~R~~~~la~~lgv~~~~v~~~V~G~Hsg~t~vp~~S~~-~g~~~~~~~ 198 (312)
T 3hhp_A 121 VNTTVAIAAE-VLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQE 198 (312)
T ss_dssp HHHHHHHHHH-HHHHTTCCCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCCCCEEECSSGGGEEECGGGC-TTCCCCHHH
T ss_pred chhHHHHHHH-HHHHcCCCCcceEEEEechhHHHHHHHHHHHhCcChhHcceeEEeccCCCceeeecccC-CCCCCCHHH
Confidence 9944444333 5677787 999999999999999999999999999999999999999768999999998 333578889
Q ss_pred HHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEeeeecCCCCCccEEEEeEEEcCCceEEE
Q 023853 163 IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEI 242 (276)
Q Consensus 163 ~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s~~~~~y~~~~~~s~Pv~ig~~Gv~~i 242 (276)
|++|.++|+++|++|++.|.|+|+++||+|+++++++++|+.+++|++.++||++++|+...++|||+||++|++|++++
T Consensus 199 ~~~i~~~v~~~g~eIi~~k~g~gst~~s~a~a~~~~~~ai~~~l~~~~~v~~~s~~~g~g~~~v~~s~P~~~g~~Gv~~v 278 (312)
T 3hhp_A 199 VADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEER 278 (312)
T ss_dssp HHHHHHHHHTHHHHHHHHTTTSCCCCHHHHHHHHHHHHHHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHhhhHHHHhhccCCCCchhHHHHHHHHHHHHHHHHcCCCCceEEEEEecCCCCcceEEEeEEEEeCCEEEEE
Confidence 99999999999999999876779999999999999999997766678889999988865345789999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 023853 243 YSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 276 (276)
Q Consensus 243 ~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 276 (276)
+++++|+++|+++|++|++.|+++++++++|+.+
T Consensus 279 ~~~~~L~~~E~~~l~~s~~~l~~~i~~g~~~~~~ 312 (312)
T 3hhp_A 279 KSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312 (312)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9987899999999999999999999999999864
No 2
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=100.00 E-value=1.2e-61 Score=444.45 Aligned_cols=255 Identities=23% Similarity=0.339 Sum_probs=233.8
Q ss_pred cccccccCC-cccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDVD-SRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~-~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+|+++|++ ++....+..++||+ +++|||+||+++|.|+||||+|+|++.+|++|++++++.|++++|+++++++|||
T Consensus 60 ~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP 138 (331)
T 4aj2_A 60 EMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP 138 (331)
T ss_dssp HHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred HHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence 478899985 66677788899997 7999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC------
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------ 156 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~------ 156 (276)
+| ++|+++++.+|||++||||+ |.||++|+++++|+++|+++++|+++|||||| +++||+||++++.+
T Consensus 139 vd----i~t~~~~k~sg~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~ViGeHG-~s~vp~~S~~~v~G~p~~~~ 213 (331)
T 4aj2_A 139 VD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG-DSSVPVWSGVNVAGVSLKSL 213 (331)
T ss_dssp HH----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGCBCCEEBCSS-TTCEECGGGCEETTEEHHHH
T ss_pred HH----HHHHHHHHHhCCCHHHEEeeccccHHHHHHHHHHHHhCCCHHHCEEeEEecCC-CceeEeeecCeECCEEHHHH
Confidence 99 89999999999999999999 99999999999999999999999999999996 79999999997643
Q ss_pred ------CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC--CccE
Q 023853 157 ------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT--ELPF 227 (276)
Q Consensus 157 ------~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~--~~~~ 227 (276)
.+++++|++|.++|+++|++|++.| |+++||+|+++++++++|+++ ++.++|++ +++|+|+ +++|
T Consensus 214 ~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---g~t~~a~a~a~a~~~~ail~d---~~~~~~vs~~~~g~ygi~~~v~ 287 (331)
T 4aj2_A 214 NPQLGTDADKEQWKDVHKQVVDSAYEVIKLK---GYTSWAIGLSVADLAESIMKN---LRRVHPISTMIKGLYGIKEDVF 287 (331)
T ss_dssp CTTTTSTTCTTCTHHHHHHHHHHHHHHHHHH---SSCCHHHHHHHHHHHHHHHTT---CCEEEEEEEECTTGGGCCSCCE
T ss_pred HhhccCCCCHHHHHHHHHHHHHhHHHHhhcC---CCCchhHHHHHHHHHHHHHhC---CCCeEEEEEecCCccCCcCceE
Confidence 1356789999999999999999965 789999999999999999995 78899987 7788884 6899
Q ss_pred EEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 023853 228 FASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSF 273 (276)
Q Consensus 228 ~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~ 273 (276)
||+||++|++|+++++++ +|+++|+++|++|++.|++ +.+.++|
T Consensus 288 ~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~~-~~~~~~~ 331 (331)
T 4aj2_A 288 LSVPCILGQNGISDVVKV-TLTPDEEARLKKSADTLWG-IQKELQF 331 (331)
T ss_dssp EEEEEEEETTEEEEEECC-CCCHHHHHHHHHHHHHHHH-HHTTCCC
T ss_pred EEEEEEEcCCeeEEEccC-CCCHHHHHHHHHHHHHHHH-HHhhcCC
Confidence 999999999999999997 9999999999999999997 5555543
No 3
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=100.00 E-value=1.7e-60 Score=434.79 Aligned_cols=272 Identities=54% Similarity=0.910 Sum_probs=250.7
Q ss_pred cccccccCCccc-ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDVDSRA-VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~-~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+++++|+..+. ++.+.+++|+++|++|||+||+++|.|+++|++|.+++.+|+++++++++.|++++|+++++++|||
T Consensus 40 ~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP 119 (314)
T 1mld_A 40 VAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (314)
T ss_dssp HHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred HHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 467888887663 4433346799989999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChhHH
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEI 163 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~~~ 163 (276)
+|.+++++++++++.++||++||||+|.||+.|+++++|+++|++|++|+++|||||+|++++|+||++.+...+++++|
T Consensus 120 v~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~l~v~~~~v~~~v~G~H~G~~~~p~~s~~~~~~~~~~~~~ 199 (314)
T 1mld_A 120 VNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQL 199 (314)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHHTTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHH
T ss_pred cchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHHHHHHhCcChHhEEEEEccCCCCCcEeeecccCCCcccCCHHHH
Confidence 99888888899999999999999999999999999999999999999999999999955899999999987556888899
Q ss_pred HHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEeeeecCCCCCccEEEEeEEEcCCceEEEc
Q 023853 164 DYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIY 243 (276)
Q Consensus 164 ~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s~~~~~y~~~~~~s~Pv~ig~~Gv~~i~ 243 (276)
+++.++++++++++++.|.|+|+++||+|.++++++++|+++.+|++.+++|++++|+|++++|||+||++|++|+++++
T Consensus 200 ~~~~~~v~~~g~eii~~k~~~g~t~~~~a~a~~~~~~ai~~~~~g~~~v~~~~~~~g~y~~~~~~~~P~~ig~~Gv~~i~ 279 (314)
T 1mld_A 200 STLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNL 279 (314)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhhcCCCCcchhHHHHHHHHHHHHHcCcCCCcceEEEEEeCCccCCceEEEEEEEEeCCeeEEec
Confidence 99999999999999998878899999999999999999999876666889998889999889999999999999999998
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 023853 244 SLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 276 (276)
Q Consensus 244 ~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 276 (276)
++++|+++|+++|++|++.|++.++++.+|+++
T Consensus 280 ~l~~l~~~e~~~l~~s~~~l~~~~~~~~~~~~~ 312 (314)
T 1mld_A 280 GIGKISPFEEKMIAEAIPELKASIKKGEEFVKN 312 (314)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 877899999999999999999999999999763
No 4
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=100.00 E-value=3.9e-60 Score=433.30 Aligned_cols=260 Identities=29% Similarity=0.479 Sum_probs=236.9
Q ss_pred cccccccCCcccc--cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDSRAV--RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~~~~--~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.+|+++|++.+.. ..+.+++|++ +++|||+||+++|.|++||++|.|++.+|+++++++++.|.+++|+++++++||
T Consensus 45 ~a~dL~~~~~~~~~~~~v~~t~d~~-a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 45 KALDLLQTCPIEGVDFKVRGTNDYK-DLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp HHHHHHTTHHHHTCCCCEEEESCGG-GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HHHHHHhhhhhcCCCcEEEEcCCHH-HHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 3678999875443 3466678885 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEe-echHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----- 156 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~t-~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----- 156 (276)
|+| ++++++++.+|||++||||+| .||++|++++||+++|+++++|+++|||||| ++++|+||++++.+
T Consensus 124 Pvd----~~t~~~~k~sg~p~~rviG~~~~LD~~R~~~~la~~l~v~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~p~~~ 198 (321)
T 3p7m_A 124 PLD----IMVNMLQKFSGVPDNKIVGMAGVLDSARFRTFLADELNVSVQQVQAYVMGGHG-DTMVPLTKMSNVAGVSLEQ 198 (321)
T ss_dssp SHH----HHHHHHHHHHCCCGGGEEEECHHHHHHHHHHHHHHHHTCCGGGEECCEEECSG-GGEEECTTTCEETTEEHHH
T ss_pred chH----HHHHHHHHhcCCCHHHEEeeccchHHHHHHHHHHHHhCcCHHHceEeeecCcC-CceeeeeeeceECCEehhh
Confidence 999 888999999999999999995 9999999999999999999999999999995 79999999998754
Q ss_pred -----CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eec-CCCC--CccE
Q 023853 157 -----SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVA-STVT--ELPF 227 (276)
Q Consensus 157 -----~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~-~~y~--~~~~ 227 (276)
.+++++++++.++++++|++|+++| |||+++||+|+++++++++|+++ ++.++||+ +++ |+|+ +++|
T Consensus 199 ~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-g~gsa~~~~a~a~~~~~~ail~~---~~~v~~~s~~~~~g~ygi~~~v~ 274 (321)
T 3p7m_A 199 LVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTGSAYYAPAAAGIQMAESFLKD---KKMILPCAAKVKAGMYGLDEDLF 274 (321)
T ss_dssp HHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEECTTGGGCSSCEE
T ss_pred hccccCCCHHHHHHHHHHHHhhhHHHHHhc-CCCChHHHHHHHHHHHHHHHHcC---CCcEEEEEEEccCcccCCCCCeE
Confidence 1367788999999999999999987 78999999999999999999995 78899998 678 7883 5899
Q ss_pred EEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 023853 228 FASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 276 (276)
Q Consensus 228 ~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 276 (276)
||+||++|++|++++ ++ +|+++|+++|++|++.|++.++....+++|
T Consensus 275 ~s~P~~~g~~Gv~~v-~l-~L~~~E~~~l~~s~~~l~~~~~~~~~~l~~ 321 (321)
T 3p7m_A 275 VGVPTEISANGVRPI-EV-EISDKEREQLQVSINAIKDLNKAAAEILAK 321 (321)
T ss_dssp EEEEEEEETTEEEEC-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEEEcCCEEEEe-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999 87 999999999999999999999998887765
No 5
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=100.00 E-value=7.8e-61 Score=436.39 Aligned_cols=259 Identities=26% Similarity=0.448 Sum_probs=229.7
Q ss_pred cccccccCCcccccc--eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDSRAVRG--FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~--i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.+|+++|++.+..+. +.++++++ +++|||+||+++|.|++|||+|+|++.+|++|++++++.|.+++|+++++++||
T Consensus 41 ~a~DL~~~~~~~~~~~~v~~~~~~~-a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 41 KALDMRESSPIHGFDTRVTGTNDYG-PTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp HHHHHHHHHHHHTCCCEEEEESSSG-GGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred HHHHHhccccccCCCcEEEECCCHH-HhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 478999987765443 55567775 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----- 156 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----- 156 (276)
|+| ++++++++.+|||++||||+ |.||++|+++++|+++|+++++|+++|||||| +++||+||++++.+
T Consensus 120 Pvd----~~t~~~~k~~g~p~~rviG~~t~LD~~R~~~~la~~lgv~~~~v~~~ViG~Hg-~t~vp~~S~~~v~g~p~~~ 194 (314)
T 3nep_X 120 PLD----VMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGGHG-DTMVPLPRYTTVGGIPVPQ 194 (314)
T ss_dssp SHH----HHHHHHHHHHTCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEEEEEESSG-GGEEEEEEEEEETTEEGGG
T ss_pred chh----HHHHHHHHhcCCChHHEEeecCchHHHHHHHHHHHHhCcCHHHeEEEEECCCC-CcEEeeeecCeECcEehhh
Confidence 999 88888899999999999999 59999999999999999999999999999997 69999999998754
Q ss_pred CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEE
Q 023853 157 SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRL 234 (276)
Q Consensus 157 ~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~i 234 (276)
.++++++++|.++|+++|++|+++| |+ ++.||+|+++++++++|+++ ++.++||+ +++|+|+ +++|||+||++
T Consensus 195 ~~~~~~~~~i~~~v~~~g~eIi~~k-g~-sa~~a~a~a~~~~~~ail~~---~~~v~~~s~~~~g~yg~~~~~~s~P~~l 269 (314)
T 3nep_X 195 LIDDARIEEIVERTKGAGGEIVDLM-GT-SAWYAPGAAAAEMTEAILKD---NKRILPCAAYCDGEYGLDDLFIGVPVKL 269 (314)
T ss_dssp TSCHHHHHHHHHHHHTHHHHHHHHH-SS-CCCHHHHHHHHHHHHHHHHT---CCEEEEEEEEEESGGGCEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHhHHHHHhcc-CC-cHHHHHHHHHHHHHHHHHcC---CCeEEEEEEEeccccCCCceEEEEEEEE
Confidence 3567778999999999999999987 55 99999999999999999995 78899997 7799994 68999999999
Q ss_pred cCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023853 235 GRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 275 (276)
Q Consensus 235 g~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~ 275 (276)
|++|+++++++ +|+++|+++|++|++.|++.+++..+++.
T Consensus 270 g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~~l~ 309 (314)
T 3nep_X 270 GAGGVEEVIEV-DLDADEKAQLKTSAGHVHSNLDDLQRLRD 309 (314)
T ss_dssp ETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998 99999999999999999999998877664
No 6
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=100.00 E-value=2.9e-60 Score=433.00 Aligned_cols=253 Identities=28% Similarity=0.473 Sum_probs=232.4
Q ss_pred cccccccCCcccc---cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 5 LAQNKFDVDSRAV---RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 5 ~~~~~~d~~~~~~---~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++|+++|++ |.+ ..++.++|++ +++|||+||+++|.|++||++|+|++.+|+++++++++.+.+++|+++++++|
T Consensus 50 ~a~dl~~~~-~~~~~~~~i~~t~d~~-a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 50 KALDMLEAS-PVQGFDANIIGTSDYA-DTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp HHHHHHHHH-HHHTCCCCEEEESCGG-GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred hhhhHHHhh-hhccCCCEEEEcCCHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 357888875 333 3577788886 89999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----
Q 023853 82 NPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC---- 156 (276)
Q Consensus 82 NP~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~---- 156 (276)
||+| ++++++++.+|||++||||+ |.||++|++++||+++|+++++|+++|||||| +++||+||++++.+
T Consensus 128 NPvd----~~t~~~~k~sg~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~viG~Hg-~t~vp~~S~~~v~g~p~~ 202 (315)
T 3tl2_A 128 NPVD----AMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVLGGHG-DDMVPLVRYSYAGGIPLE 202 (315)
T ss_dssp SSHH----HHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCEEBCSG-GGCEECGGGCEETTEEGG
T ss_pred ChHH----HHHHHHHHhcCCChHHEEeeccCcHHHHHHHHHHHHhCcCHHHceeeEecCCC-CcceeecccCeECCEEHH
Confidence 9999 88888899999999999999 99999999999999999999999999999996 79999999998754
Q ss_pred -CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEE
Q 023853 157 -SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVR 233 (276)
Q Consensus 157 -~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ 233 (276)
.++++++++|.++|+++|++|++++ |||+++||+|+++++++++|+++ ++.++||+ +++|+|+ +++|||+||+
T Consensus 203 ~~~~~~~~~~i~~~v~~~g~eii~~~-~kgst~~a~a~a~~~~~~ail~~---~~~v~~~s~~~~g~yg~~~~~~s~P~~ 278 (315)
T 3tl2_A 203 TLIPKERLEAIVERTRKGGGEIVGLL-GNGSAYYAPAASLVEMTEAILKD---QRRVLPAIAYLEGEYGYSDLYLGVPVI 278 (315)
T ss_dssp GTSCHHHHHHHHHHHHTHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHhc-CCCcchHHHHHHHHHHHHHHHcC---CCcEEEEEEeccCccCCCceEEEEEEE
Confidence 3677788999999999999999864 68999999999999999999995 78899998 7899994 6899999999
Q ss_pred EcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 023853 234 LGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269 (276)
Q Consensus 234 ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 269 (276)
+|++|+++++++ +|+++|+++|++|++.|++.++.
T Consensus 279 ~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~ 313 (315)
T 3tl2_A 279 LGGNGIEKIIEL-ELLADEKEALDRSVESVRNVMKV 313 (315)
T ss_dssp EETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EeCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 89999999999999999998764
No 7
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=8.2e-61 Score=437.97 Aligned_cols=253 Identities=24% Similarity=0.363 Sum_probs=211.1
Q ss_pred cccccccCCcccccceec-CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLG-QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~-~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+|+++|++ |++..+.. ++++ ++++|||+||+++|.|++|||+|+|++.+|++|++++++.|.+++|+++++++|||
T Consensus 50 ~a~DL~~~~-~~~~~~~i~~~~~-~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNP 127 (326)
T 3vku_A 50 DAIDLEDAL-PFTSPKKIYSAEY-SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANP 127 (326)
T ss_dssp HHHHHHTTG-GGSCCCEEEECCG-GGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSS
T ss_pred HHhhHhhhh-hhcCCcEEEECcH-HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCc
Confidence 468999976 45555554 4456 48999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCC-----
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCS----- 157 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~----- 157 (276)
+| ++||++++.+|||++||||+ |.||++|+++++|+++|+++++|+++|||||| +++||+||++++.+.
T Consensus 128 vd----i~t~~~~k~~g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~ViGeHG-dt~vp~~S~a~v~g~pl~~~ 202 (326)
T 3vku_A 128 VD----ILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAYIMGEHG-DTEFPVWSHANIGGVTIAEW 202 (326)
T ss_dssp HH----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEECCEEBSSS-TTCEECGGGCEETTEEHHHH
T ss_pred hH----HHHHHHHHhcCCCHHHeeeecccCcHHHHHHHHHHHhCCCHHHCeEEEEcCCC-CeeEEeeeccccCCEEHHHH
Confidence 99 89999999999999999999 99999999999999999999999999999996 799999999987541
Q ss_pred ------CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEE
Q 023853 158 ------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFA 229 (276)
Q Consensus 158 ------~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s 229 (276)
++++++++|.++|+++|++|++. ||+|+||+|+++++++++|+++ ++.++||| +++|+|+ +++|||
T Consensus 203 ~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kG~t~~a~a~a~~~~~~ail~~---~~~v~~~s~~~~g~yg~~~v~~s 276 (326)
T 3vku_A 203 VKAHPEIKEDKLVKMFEDVRNKAYEIIKL---KGATFYGIATALARISKAILND---ENAVLPLSVYMDGQYGLNDIYIG 276 (326)
T ss_dssp HHHCTTSCHHHHHHHHHHHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEEEGGGEEEEEEE
T ss_pred hccccCCCHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHhcC---CCceEEEEeeccCccCCCceEEE
Confidence 15667899999999999999985 4899999999999999999995 78899987 7899995 689999
Q ss_pred EeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 230 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 230 ~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
+||++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 277 ~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~sa~~L~~~~~~~~ 317 (326)
T 3vku_A 277 TPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAF 317 (326)
T ss_dssp EEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHCC-----
T ss_pred EEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 9999999999999999998887653
No 8
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=100.00 E-value=1.8e-59 Score=423.92 Aligned_cols=246 Identities=21% Similarity=0.328 Sum_probs=226.4
Q ss_pred cccccccCCc--ccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDS--RAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~--~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.+|+++|++. +.-.++.+++|+ ++++|||+||+++|.|++||++|+|++.+|+++++++++.|.+++|+++++++||
T Consensus 41 ~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 41 EAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp HHHHHHHHHHTTTCCCEEEEESCG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred HHHHHHhhhhhcCCCCEEEEeCCH-HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 3678888773 344467778885 6999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChh
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPT 161 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~ 161 (276)
|+| ++|+++++.+|||++||||+ |.||++||+++|| ++|++|++ +++|||||| +++||+||++++.+ .+
T Consensus 120 Pvd----~~t~~~~k~~g~p~~rviG~gt~LD~~R~~~~la-~l~v~~~~-~~~V~G~Hg-~t~vp~~s~~~v~g-~~-- 189 (294)
T 1oju_A 120 PMD----VMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLY-NAGARNIR-RAWIIGEHG-DSMFVAKSLADFDG-EV-- 189 (294)
T ss_dssp SHH----HHHHHHHHHSCCCTTSEEECSHHHHHHHHHHHHH-HTTCBSCC-CCCEEBCSS-TTCEECGGGCCCBS-CC--
T ss_pred cch----HHHHHHHHhcCCCHHHEeecccccHHHHHHHHHH-HhCCCccC-ceEEEecCC-CceeeecccceECC-cC--
Confidence 999 89999999999999999999 8999999999999 99999999 999999995 79999999998864 23
Q ss_pred HHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCce
Q 023853 162 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGI 239 (276)
Q Consensus 162 ~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv 239 (276)
++++|.++|+++|++|++.| |+++||+|+++++++++|+++ ++.++||| +++|+|+ +++|||+||++|++|+
T Consensus 190 ~~~~~~~~v~~~g~eii~~k---G~t~~~~a~a~~~~~~ail~~---~~~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv 263 (294)
T 1oju_A 190 DWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYRMVKAVVED---TGEIIPTSMILQGEYGIENVAVGVPAKLGKNGA 263 (294)
T ss_dssp CHHHHHHHHHTTHHHHHHHH---SSCCHHHHHHHHHHHHHHHTT---CCCEEEEEEEEESGGGCEEEEEEEEEEEETTEE
T ss_pred hHHHHHHHHHHHHHHHHHhc---CCcchHHHHHHHHHHHHHHcC---CCeEEEEEecccccCCCCceEEEEEEEEeCCEE
Confidence 68999999999999999965 799999999999999999995 78899998 7899994 5899999999999999
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 023853 240 EEIYSLGPLNEYERAGLEKAKKELAGSIQK 269 (276)
Q Consensus 240 ~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 269 (276)
+ ++++ +|+++|+++|++|++.|++.+++
T Consensus 264 ~-v~~l-~L~~~E~~~l~~s~~~l~~~~~~ 291 (294)
T 1oju_A 264 E-VADI-KLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp E-ECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred E-EecC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9 9998 99999999999999999998875
No 9
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=100.00 E-value=1.5e-59 Score=429.73 Aligned_cols=257 Identities=28% Similarity=0.466 Sum_probs=229.9
Q ss_pred cccccccCCccc--ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDSRA--VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~~~--~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.+|+++|++.+. -..+..++|+ ++++|||+||+++|.|++||++|.|++.+|+++++++++.|++++|+++++++||
T Consensus 47 ~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 47 KGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp HHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 367888876533 2346678899 5999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEe-echHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----- 156 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~t-~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----- 156 (276)
|+| ++++++++.+|||++||||+| .||++|++++||+++|+++++|+++|||||| ++++|+||++++.+
T Consensus 126 Pvd----~~t~~~~k~sg~p~~rviG~~~~LD~~R~~~~la~~lgv~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~p~~~ 200 (324)
T 3gvi_A 126 PLD----AMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFVLGGHG-DSMVPLARYSTVAGIPLPD 200 (324)
T ss_dssp SHH----HHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCEEECSG-GGEEECGGGCEETTEEHHH
T ss_pred CcH----HHHHHHHHhcCCCHHHEEeecCccHHHHHHHHHHHHhCcCHHHCeEEEEcCCC-CceeeehhhCeECCEEHHH
Confidence 999 888888999999999999995 8999999999999999999999999999996 79999999998754
Q ss_pred -----CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEE
Q 023853 157 -----SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFA 229 (276)
Q Consensus 157 -----~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s 229 (276)
.+++++++++.++++++|++|+++| |||+++||+|+++++++++|+++ ++.++||| +++|+|+ +++|||
T Consensus 201 ~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-gkgsa~~~~a~a~~~~~~ail~~---~~~v~~~s~~~~g~yg~~~v~~s 276 (324)
T 3gvi_A 201 LVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-KTGSAFYAPAASAIQMAESYLKD---KKRVLPVAAQLSGQYGVKDMYVG 276 (324)
T ss_dssp HHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSCCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEE
T ss_pred hhhccCCCHHHHHHHHHHHHHhHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHcC---CCcEEEEEEEecCccCCCceEEE
Confidence 1367788999999999999999987 88999999999999999999995 78899998 7789994 589999
Q ss_pred EeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 023853 230 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVS 272 (276)
Q Consensus 230 ~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~ 272 (276)
+||++|++|+++++++ +|+++|+++|++|++.|++.+++...
T Consensus 277 ~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~ 318 (324)
T 3gvi_A 277 VPTVIGANGVERIIEI-DLDKDEKAQFDKSVASVAGLCEACIG 318 (324)
T ss_dssp EEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998 99999999999999999999987654
No 10
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=100.00 E-value=7.7e-60 Score=431.89 Aligned_cols=252 Identities=24% Similarity=0.329 Sum_probs=229.3
Q ss_pred cccccccCCcccc-cceec-CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDSRAV-RGFLG-QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~~~~-~~i~~-~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.+|+++|+ .|.+ +.+.. ++|++ +++|||+||+++|.|++||++|.|++..|+++++++++.+.+++|+++++++||
T Consensus 46 ~a~DL~~~-~~~~~~~v~i~~~~~~-a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 46 DVMDLNHG-KAFAPQPVKTSYGTYE-DCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp HHHHHHHT-GGGSSSCCEEEEECGG-GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred HHHHHHhc-cccccCCeEEEeCcHH-HhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 47889997 6665 33333 55675 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----C
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----S 157 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----~ 157 (276)
|+| ++|+++++.+|||++||||+ |.||++|++++||+++|+++++|++||||||| +++||+||++++.+ .
T Consensus 124 Pvd----~~t~~~~k~~g~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~V~~~V~GeHG-~t~vp~~S~~~v~g~p~~~ 198 (326)
T 3pqe_A 124 PVD----ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGEHG-DTELPVWSHANVGGVPVSE 198 (326)
T ss_dssp SHH----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBSSS-TTCEECGGGCEETTEEHHH
T ss_pred hHH----HHHHHHHHhcCCCHHHEEeeccccHHHHHHHHHHHHhCCCHHHceeeeeecCC-CceeeeeeeeeECCEEHHH
Confidence 999 89999999999999999999 99999999999999999999999999999996 79999999998754 1
Q ss_pred -------CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEE
Q 023853 158 -------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFF 228 (276)
Q Consensus 158 -------~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~ 228 (276)
++++++++|.++|+++|++|++.| |+|+||+|+++++++++|+++ ++.++||| +++|+|+ +++||
T Consensus 199 ~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---G~t~~a~a~a~~~~~~ail~~---~~~v~~~s~~~~g~yg~~~v~~ 272 (326)
T 3pqe_A 199 LVEKNDAYKQEELDQIVDDVKNAAYHIIEKK---GATYYGVAMSLARITKAILHN---ENSILTVSTYLDGQYGADDVYI 272 (326)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHTT---CCEEECCEEEEESGGGCEEEEE
T ss_pred HhhcccCCCHHHHHHHHHHHHhhhheeeeCC---CCcHHHHHHHHHHHHHHHhcC---CCcEEEEEEeeccccCCCceEE
Confidence 256678999999999999999954 899999999999999999995 78899987 7899994 68999
Q ss_pred EEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 229 s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
|+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 273 s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~~~~~~~ 313 (326)
T 3pqe_A 273 GVPAVVNRGGIAGITEL-NLNEKEKEQFLHSAGVLKNILKPH 313 (326)
T ss_dssp ECCEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998 999999999999999999988653
No 11
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=100.00 E-value=2e-59 Score=422.94 Aligned_cols=246 Identities=21% Similarity=0.330 Sum_probs=222.5
Q ss_pred cccccccCCccc--ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDSRA--VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~~~--~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.||+|+|++... ...+..++||+ +++|||+|||++|.||||||+|+|++..|++|++++++.|.+++|+++++++||
T Consensus 41 ~a~DL~h~~~~~~~~~~i~~~~d~~-~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 41 EAMDLAHAAAGIDKYPKIVGGADYS-LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp HHHHHHHHHGGGTCCCEEEEESCGG-GGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred hhhhhhcccccCCCCCeEecCCCHH-HhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 367888876433 34577889996 899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChh
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPT 161 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~ 161 (276)
|+| ++++++++.+|+|++|+||+ |.||++||+++|++++++++. +++|||||| ++++|+||++.+.+ ..
T Consensus 120 Pvd----~~t~i~~k~sg~p~~rvig~gT~LDs~R~~~~l~~~~~~~~~--~~~V~G~HG-dt~vp~~S~~~v~g---~~ 189 (294)
T 2x0j_A 120 PMD----VMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGARNIR--RAWIIGEHG-DSMFVAKSLADFDG---EV 189 (294)
T ss_dssp SHH----HHHHHHHHHSSCCTTSEEECCHHHHHHHHHHHHHHTTCEEEC--CCCEEBCSS-TTCEECGGGCCEES---CC
T ss_pred cch----hhHHhhHHHcCCChhhEEEeeeEEeHHHHHHHHhhcccCCcc--eeEEEecCC-CcEEEeeeccCCCC---ch
Confidence 999 88888999999999999999 999999999999999887643 699999996 79999999998754 34
Q ss_pred HHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCce
Q 023853 162 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGI 239 (276)
Q Consensus 162 ~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv 239 (276)
+++++.++++++|++|++.| |+++||+|+++++++++|+++ ++.++||+ +++|+|+ +++|||+||+||++|+
T Consensus 190 ~~~~i~~~~~~~g~eIi~~k---Gst~~a~a~a~~~~~~ail~d---~~~v~~~s~~l~g~yG~~~v~~s~P~~lg~~Gv 263 (294)
T 2x0j_A 190 DWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYRMVKAVVED---TGEIIPTSMILQGEYGIENVAVGVPAKLGKNGA 263 (294)
T ss_dssp CHHHHHHHHHTHHHHHHHHH---SSCCHHHHHHHHHHHHHHHTT---CCCEEEEEEEEESGGGCEEEEEEEEEEEETTEE
T ss_pred hHHHHHHHHhhhheEEEecC---cccchhHHHHHHHHHHHHHcC---CCcEEEEEEEEecCCCCccEEEEEEEEEeCCEE
Confidence 57888899999999999854 899999999999999999995 78999998 7799994 6899999999999998
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 023853 240 EEIYSLGPLNEYERAGLEKAKKELAGSIQK 269 (276)
Q Consensus 240 ~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 269 (276)
+++++ +|+++|+++|++|++.||+.+++
T Consensus 264 -ei~~l-~L~~~E~~~l~~s~~~lk~~i~~ 291 (294)
T 2x0j_A 264 -EVADI-KLSDEEIEKLRNSAKILRERLEE 291 (294)
T ss_dssp -EECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred -EEeCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 58887 99999999999999999998865
No 12
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=100.00 E-value=1.9e-58 Score=427.69 Aligned_cols=260 Identities=19% Similarity=0.209 Sum_probs=224.9
Q ss_pred cccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP 83 (276)
.+|+|+||+.|+++.+..+++..++++|||+|||++|.||||||+|+|++.+|++|++++++.|.++ +|+++++|+|||
T Consensus 81 ~amDL~h~~~p~~~~v~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP 160 (375)
T 7mdh_A 81 VAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP 160 (375)
T ss_dssp HHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred HHHhHHhhhhhhcCCcEEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence 4799999999998888776654469999999999999999999999999999999999999999998 799999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCcee-eEEeecCCCeeeecccCCCCCC-----
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDV-PVVGGHAGVTILPLLSQVKPSC----- 156 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~-~ViG~hgg~~~vp~~s~~~~~~----- 156 (276)
+| ++||++++.+|++++|+||+ |.||++||+++||+++|++|++|++ +|||||| +++||+||++++.+
T Consensus 161 vD----~~t~ia~k~sg~~~~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHg-dt~vp~~S~a~V~G~pl~~ 235 (375)
T 7mdh_A 161 CN----TNALICLKNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS-TTQVPDFLNAKIDGRPVKE 235 (375)
T ss_dssp HH----HHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSS-TTCEEECSSCEETTEEGGG
T ss_pred hh----HHHHHHHHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCC-CceeeeeecccCCCEEhhH
Confidence 99 88888899888888899999 9999999999999999999999995 8999997 79999999998754
Q ss_pred CCChhHH--HHHHHHHhcCccceeeccCCCCchhHH-HHHHHHHHHHHHHhccCCCCCeeEee-eecC-CCC--CccEEE
Q 023853 157 SLTPTEI--DYLTDRIQNGGTEVVEAKTGAGSATLS-MAYAAAKFADACLRGLRGDAGVIECA-YVAS-TVT--ELPFFA 229 (276)
Q Consensus 157 ~~~~~~~--~~i~~~v~~~~~~ii~~k~gkg~~~~s-~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~-~y~--~~~~~s 229 (276)
...+++| ++|.++|+++|++|+++| |+++|+ .|.++++.+.+|+++. |++.++||| +++| +|+ +++|||
T Consensus 236 ~~~~~~~~~~~i~~~v~~~g~eII~~k---G~ts~a~aa~~i~~~i~~~l~g~-d~~~v~~vs~~~~G~~YGi~~dv~~s 311 (375)
T 7mdh_A 236 VIKRTKWLEEEFTITVQKRGGALIQKW---GRSSAASTAVSIADAIKSLVTPT-PEGDWFSTGVYTTGNPYGIAEDIVFS 311 (375)
T ss_dssp TCCCHHHHHHHHHHHHHTHHHHHHHHT---SSCCHHHHHHHHHHHHHHHHSCC-CTTCCEEEEEECTTCSSCCCSSSEEE
T ss_pred hccchhhHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHhcCC-CCCeEEEEEEEeCCccCCCCCceEEE
Confidence 2344555 789999999999999976 445552 3344444444445422 468899998 6788 684 689999
Q ss_pred EeEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 023853 230 SKVRLGRAGIEEIYS-LGPLNEYERAGLEKAKKELAGSIQKGVSFV 274 (276)
Q Consensus 230 ~Pv~ig~~Gv~~i~~-~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~ 274 (276)
+||++|++|++++++ + +|+++|+++|++|++.|+++.+.+..++
T Consensus 312 ~P~vlg~~Gv~~iv~~l-~L~~~E~~~l~~Sa~~L~~e~~~~~~~~ 356 (375)
T 7mdh_A 312 MPCRSKGDGDYELATDV-SNDDFLWERIKKSEAELLAEKKCVAHLT 356 (375)
T ss_dssp EEEECCSSSCCEECCCC-CCCHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred EEEEEcCCeeEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999996 6 9999999999999999999998877765
No 13
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=100.00 E-value=1.5e-57 Score=417.51 Aligned_cols=270 Identities=87% Similarity=1.324 Sum_probs=245.9
Q ss_pred ccccccCCcc-cccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 6 AQNKFDVDSR-AVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 6 ~~~~~d~~~~-~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
++++.|+..+ .++.+..++|++++++|||+||+++|.|+++|++|.+++.+|+++++++++.+.+++|+++++++|||+
T Consensus 49 ~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 49 TADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp HHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred HHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 4567776554 455444477999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChhHHH
Q 023853 85 NSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEID 164 (276)
Q Consensus 85 d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~~~~ 164 (276)
|.+|+++||++++.++||++||||+|.||+.|++++||+++|++|++|+++|||||+|++++|+||++.+...+++++++
T Consensus 129 ~~~~~~~t~~~~~~~~~p~~rviG~~~Ld~~r~~~~la~~l~v~~~~v~~~v~G~H~G~~~~p~~s~~~v~~~~~~~~~~ 208 (326)
T 1smk_A 129 NSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQEEIS 208 (326)
T ss_dssp HHHHHHHHHHHHHHTCCCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHH
T ss_pred HHHHHHHHHHHHHccCCCcccEEEEeehHHHHHHHHHHHHhCcChhheEEEEecccCCceEEEecccCeecCcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999558999999999886668888899
Q ss_pred HHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEeeeecCCCCCccEEEEeEEEcCCceEEEcc
Q 023853 165 YLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYS 244 (276)
Q Consensus 165 ~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s~~~~~y~~~~~~s~Pv~ig~~Gv~~i~~ 244 (276)
++.++++++++++++.|.|+|+++||+|.++++++++|+..+.|++.++++++++|+|++++|||+||+||++|++++++
T Consensus 209 ~~~~~v~~~g~eii~~k~~~gs~~~~~a~a~~~~~~ai~~~~~~~~~v~~~~~~~g~~~~~~~~~vP~~ig~~Gv~~i~~ 288 (326)
T 1smk_A 209 YLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYS 288 (326)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHHHHHHHHHTCSCEEEEEEEECCSSSSSEEEEEEEEETTEEEEECC
T ss_pred HHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeeccccCCceEEEEEEEEeCCeeEEEcC
Confidence 99999999999999987678999999999999999999333335888999997788888889999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023853 245 LGPLNEYERAGLEKAKKELAGSIQKGVSFVR 275 (276)
Q Consensus 245 ~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~ 275 (276)
+++|+++|+++|++|++.|++.++++.+|..
T Consensus 289 ~~~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 319 (326)
T 1smk_A 289 LGPLNEYERIGLEKAKKELAGSIEKGVSFIR 319 (326)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3399999999999999999999999999864
No 14
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.1e-58 Score=422.80 Aligned_cols=256 Identities=25% Similarity=0.365 Sum_probs=221.7
Q ss_pred cccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcE-EEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAI-VNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~-vivvtNP 83 (276)
.+|+++|+++|.. .+..++|+.++++|||+||+++|.|++||++|+|++.+|++|++++++.+++++|+++ ++++|||
T Consensus 50 ~a~DL~~~~~~~~-~i~~t~d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNP 128 (343)
T 3fi9_A 50 VAEEIRHCGFEGL-NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNP 128 (343)
T ss_dssp HHHHHHHHCCTTC-CCEEESCHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSS
T ss_pred HHHhhhhCcCCCC-ceEEcCCHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCc
Confidence 4688999876643 5777889988999999999999999999999999999999999999999999999996 8999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeecCCCeeeecccCCCCCC------
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPSC------ 156 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~hgg~~~vp~~s~~~~~~------ 156 (276)
+| ++|+++++.+|||++||+|+|.||++||+++||+++|++|++|+ +||||||| ++++|+||++++.+
T Consensus 129 vd----~~t~i~~k~sg~p~~rv~g~t~LDs~R~~~~la~~l~v~~~~v~~~~ViGeHg-ds~vp~~S~a~v~G~pl~~~ 203 (343)
T 3fi9_A 129 AD----ITGLVTLIYSGLKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHG-EQMAVFASTAKVNGTPLTDL 203 (343)
T ss_dssp HH----HHHHHHHHHHTCCGGGEEEECCHHHHHHHHHHHHHHTSCGGGEECCCEEESSG-GGEEECGGGCEETTEEGGGT
T ss_pred hH----HHHHHHHHHcCCCcceEEEecCcHHHHHHHHHHHHhCcCHHHcccceEEEcCC-CceeeeeecceECCEEhhHh
Confidence 99 88888899999999999999999999999999999999999997 89999997 69999999997653
Q ss_pred ----CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCCCccEEEEe
Q 023853 157 ----SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVTELPFFASK 231 (276)
Q Consensus 157 ----~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~~~~~~s~P 231 (276)
.+++++|++|.++|+++|++|++.| | .+++||+|+++++++++|+++ ++.++|+| +++|+|.+++|||+|
T Consensus 204 ~~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g-~ss~~s~A~a~~~~~~ail~d---~~~v~~~s~~~~g~~~~~v~~s~P 278 (343)
T 3fi9_A 204 IGTDKLTNEQWAELKQRVVKGGANIIKLR-G-RSSFQSPSYVSIEMIRAAMGG---EAFRWPAGCYVNVPGFEHIMMAME 278 (343)
T ss_dssp TTBTTBCHHHHHHHHHHHHTHHHHHHHHH-S-SCCCHHHHHHHHHHHHHHTTS---SCCCSCEEEEEEETTEEEEEEEES
T ss_pred ccccCCCHHHHHHHHHHHHhhhHHHHHcc-C-CCcHHhHHHHHHHHHHHHHhC---CCceEEEEEEEeCCCcCceEEEeE
Confidence 1467889999999999999999977 2 345679999999999999985 77889987 778776678999999
Q ss_pred EEEcCCceEEEccCCC-CCHHHHHHHHHHHHHHHHHHHHHhh
Q 023853 232 VRLGRAGIEEIYSLGP-LNEYERAGLEKAKKELAGSIQKGVS 272 (276)
Q Consensus 232 v~ig~~Gv~~i~~~~~-L~~~E~~~l~~sa~~i~~~~~~~~~ 272 (276)
|++|++|++++ ++.+ |+++|+++|++|++.|++.++....
T Consensus 279 ~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~l~~~~~~~~~ 319 (343)
T 3fi9_A 279 TTITKDGVKHS-DINQLGNEAERAALKESYSHLAKLRDEVIA 319 (343)
T ss_dssp EEEETTEEEEC-CGGGSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCceEEE-ecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999876 4412 8999999999999999998877654
No 15
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=100.00 E-value=1.7e-57 Score=417.56 Aligned_cols=261 Identities=22% Similarity=0.322 Sum_probs=232.0
Q ss_pred cccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc-EEEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKA-IVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~-~vivvtNP 83 (276)
.+|+++||+.|+++.+..+++..++++|||+||+++|.||+|||+|++++..|+++++++++.+++++|++ +++++|||
T Consensus 52 ~a~DL~~~~~~~~~~~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 52 VLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp HHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hHhhhHhhhhcccCCEEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 46999999999999999888777799999999999999999999999999999999999999999999998 69999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceee-EEeecCCCeeeecccCCCC--CCC--
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVP-VVGGHAGVTILPLLSQVKP--SCS-- 157 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~-ViG~hgg~~~vp~~s~~~~--~~~-- 157 (276)
+| ++|+++++.++++|+|+||+ |.||++||+++||+++|++|++|+++ |||||| +++||+||++++ .+.
T Consensus 132 vd----~~t~~~~~~~~~~p~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHg-ds~vp~~S~a~v~i~g~~~ 206 (333)
T 5mdh_A 132 AN----TNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHS-STQYPDVNHAKVKLQAKEV 206 (333)
T ss_dssp HH----HHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS-TTCEEECTTCEEECSSCEE
T ss_pred hH----HHHHHHHHHcCCCCcCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCC-CCEEEeeeccEeccCCeec
Confidence 99 88888899886555556887 99999999999999999999999988 599997 699999999974 221
Q ss_pred -----CChhHH--HHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecC-CCC--Ccc
Q 023853 158 -----LTPTEI--DYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVAS-TVT--ELP 226 (276)
Q Consensus 158 -----~~~~~~--~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~-~y~--~~~ 226 (276)
+.++.| +++.++++++|++|+++| ++++.|++|.++++++++|+++.+ ++.++||| +++| +|+ +++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~v~~~g~eIi~~k--~~ssa~~~a~~~~~~~~~il~~~~-~~~v~~~s~~~~G~~YGi~~~v 283 (333)
T 5mdh_A 207 GVYEAVKDDSWLKGEFITTVQQRGAAVIKAR--KLSSAMSAAKAICDHVRDIWFGTP-EGEFVSMGIISDGNSYGVPDDL 283 (333)
T ss_dssp EHHHHHCCHHHHHTHHHHHHHHHHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHCCC-TTCCEEEEEECTTCSSSCCSSC
T ss_pred cHHHhhccccccHHHHHHHHHHHHHHHHHcc--CchHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEEecCCcccCCCCCe
Confidence 123344 589999999999999976 357899999999999999999632 34689998 6688 884 689
Q ss_pred EEEEeEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023853 227 FFASKVRLGRAGIEEIYS-LGPLNEYERAGLEKAKKELAGSIQKGVSFVR 275 (276)
Q Consensus 227 ~~s~Pv~ig~~Gv~~i~~-~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~ 275 (276)
|||+||++ ++|++++++ + +|+++|+++|++|++.|+++++++++|+.
T Consensus 284 ~~s~P~~~-~~Gv~~iv~~l-~L~~~E~~~l~~sa~~L~~~~~~~~~~l~ 331 (333)
T 5mdh_A 284 LYSFPVTI-KDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEFLS 331 (333)
T ss_dssp EEEEEEEE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEE-cCCeEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999 999999998 6 89999999999999999999999999985
No 16
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=100.00 E-value=4.8e-57 Score=410.99 Aligned_cols=258 Identities=25% Similarity=0.388 Sum_probs=235.8
Q ss_pred ccccccCCcccc--cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 6 AQNKFDVDSRAV--RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 6 ~~~~~d~~~~~~--~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
+|+++|++.+.. ..++.|+|+ +|++|||+||+++|.|++||++|++++.+|+++++++++.+++++|++++|++|||
T Consensus 40 ~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (308)
T 2d4a_B 40 ALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118 (308)
T ss_dssp HHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred HHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 678888765432 347777899 59999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----C
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-----S 157 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~-----~ 157 (276)
+| ++|+++++.+++|++||||+ |.||++|+++++|+++|+++++|+++|||||| ++++|+||++++.+ .
T Consensus 119 v~----~~t~~~~k~~~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~Hg-~t~~p~~s~~~v~g~~~~~~ 193 (308)
T 2d4a_B 119 VD----AMTYVMYKKTGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMHG-QKMFPVPRLSSVGGVPLEHL 193 (308)
T ss_dssp HH----HHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSS-TTCEECGGGCEETTEEHHHH
T ss_pred hH----HHHHHHHHhcCCChhhEEEecccchHHHHHHHHHHHhCcChhHeEEEEEeccC-CceeeeehhccCCCEEHHHH
Confidence 99 88999999999999999999 99999999999999999999999999999996 79999999998754 2
Q ss_pred CChhHHHHHHHHHhcCccceeeccCCCC-chhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEE
Q 023853 158 LTPTEIDYLTDRIQNGGTEVVEAKTGAG-SATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRL 234 (276)
Q Consensus 158 ~~~~~~~~i~~~v~~~~~~ii~~k~gkg-~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~i 234 (276)
+++++++++.++++++++++++. || ++.||+|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+||++
T Consensus 194 ~~~~~~~~~~~~v~~~g~eii~~---kg~s~~~~~a~a~~~~~~ai~~~---~~~v~~vs~~~~G~yg~~~~~~~vP~~i 267 (308)
T 2d4a_B 194 MSKEEIEEVVSETVNAGAKITEL---RGYSSNYGPAAGLVLTVEAIKRD---SKRIYPYSLYLQGEYGYNDIVAEVPAVI 267 (308)
T ss_dssp SCHHHHHHHHHHHHTHHHHHHHH---HSSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhhHhhhhC---CCCccHHHHHHHHHHHHHHHHhC---CCcEEEEEEEEcCccCCCceEEEEEEEE
Confidence 57778999999999999999985 47 89999999999999999995 77899987 6688884 68999999999
Q ss_pred cCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 023853 235 GRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 276 (276)
Q Consensus 235 g~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~~ 276 (276)
|++|+++++++ +|+++|+++|++|++.|++.++++.+++++
T Consensus 268 g~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~l~~ 308 (308)
T 2d4a_B 268 GKSGIERIIEL-PLTEDEKRKFDEAVQAVKKLVETLPPQLRE 308 (308)
T ss_dssp ETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTSCHHHHC
T ss_pred cCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999997 999999999999999999999988877764
No 17
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=4.7e-57 Score=412.73 Aligned_cols=258 Identities=21% Similarity=0.334 Sum_probs=225.0
Q ss_pred cccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
.+|+++|++ |++..+..+.+..+|++|||+||+++|.|++||++|++++.+|+++++++++.|++++|++|++++|||+
T Consensus 46 ~~~dl~~~~-~~~~~~~v~~~~~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 46 DALDLEDAQ-AFTAPKKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp HHHHHHGGG-GGSCCCEEEECCGGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred HHHHHHHHH-HhcCCeEEEECCHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 478889977 5666655544445689999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-------
Q 023853 85 NSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------- 156 (276)
Q Consensus 85 d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~------- 156 (276)
| ++|+++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+
T Consensus 125 ~----~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~~~~~~~ 199 (318)
T 1ez4_A 125 D----ILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMGEHG-DSEFAAYSTATIGTRPVRDVA 199 (318)
T ss_dssp H----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEESSSS-SSCEECGGGCEETTEEHHHHH
T ss_pred H----HHHHHHHHHcCCCHHHEEeccccchHHHHHHHHHHHhCcChhHEEEEEecccC-CceEEEehhhcCCCeeHHHHh
Confidence 9 89999999999999999999 99999999999999999999999999999996 79999999987653
Q ss_pred ---CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEe
Q 023853 157 ---SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASK 231 (276)
Q Consensus 157 ---~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~P 231 (276)
.++++.++++.++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+|
T Consensus 200 ~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~t~~~~a~a~~~~~~ai~~~---~~~~~~vs~~~~G~yg~~~~~~~vP 273 (318)
T 1ez4_A 200 KEQGVSDDDLAKLEDGVRNKAYDIINL---KGATFYGIGTALMRISKAILRD---ENAVLPVGAYMDGQYGLNDIYIGTP 273 (318)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhhhhheeC---CCcchHHHHHHHHHHHHHHHhC---CCcEEEEEEeecCccCCCceEEEEE
Confidence 156667899999999999999984 5899999999999999999995 77899998 6688883 48999999
Q ss_pred EEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023853 232 VRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 275 (276)
Q Consensus 232 v~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~ 275 (276)
|++|++|+++++++ +|+++|+++|++|++.|++.++++.++++
T Consensus 274 ~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 316 (318)
T 1ez4_A 274 AIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAELE 316 (318)
T ss_dssp EEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999997 99999999999999999999999988875
No 18
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=100.00 E-value=9.7e-57 Score=411.85 Aligned_cols=258 Identities=23% Similarity=0.341 Sum_probs=226.4
Q ss_pred cccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
.+|++.|++ |++..+..+.+..+|++|||+||+++|.|++||++|++++.+|+++++++++.|++++|++|++++|||+
T Consensus 50 ~~~dl~~~~-~~~~~~~i~~~~~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 50 DAIDLSNAL-PFTSPKKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp HHHHHHTTG-GGSCCCEEEECCGGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred HHHHHHHHH-HhcCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 368889976 5666655544445689999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-------
Q 023853 85 NSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------- 156 (276)
Q Consensus 85 d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~------- 156 (276)
| ++|+++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+
T Consensus 129 ~----~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~~~~e~~ 203 (326)
T 2zqz_A 129 D----ILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEHG-DTEFPVWSHANIGGVTIAEWV 203 (326)
T ss_dssp H----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBSSS-TTCEECGGGCEETTEEHHHHH
T ss_pred H----HHHHHHHHHcCCCHHHEEEccccchHHHHHHHHHHHhCCChhheEEEEecccC-CceEeehhhceECCEEHHHhh
Confidence 9 89999999999999999999 99999999999999999999999999999996 79999999987643
Q ss_pred ----CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEE
Q 023853 157 ----SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFAS 230 (276)
Q Consensus 157 ----~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~ 230 (276)
.++++.++++.++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +++|+|+ +++|||+
T Consensus 204 ~~~~~~~~~~~~~i~~~v~~~g~eii~~---kG~t~~~~a~aa~~~~~ai~~~---~~~~~~vsv~~~G~yg~~~~~~sv 277 (326)
T 2zqz_A 204 KAHPEIKEDKLVKMFEDVRDAAYEIIKL---KGATFYGIATALARISKAILND---ENAVLPLSVYMDGQYGLNDIYIGT 277 (326)
T ss_dssp HHCTTSCHHHHHHHHHHHHTHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhHHHHHHc---CCCcHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccCccCCCceEEEE
Confidence 145667789999999999999984 5889999999999999999995 77899998 6788883 4899999
Q ss_pred eEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 023853 231 KVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 275 (276)
Q Consensus 231 Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~~ 275 (276)
||++|++|+++++++ +|+++|+++|++|++.|++.++++.++++
T Consensus 278 P~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~~~~ 321 (326)
T 2zqz_A 278 PAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFAKND 321 (326)
T ss_dssp EEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred EEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999997 99999999999999999999999988875
No 19
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=100.00 E-value=9.8e-57 Score=413.47 Aligned_cols=255 Identities=22% Similarity=0.249 Sum_probs=214.5
Q ss_pred cccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP 83 (276)
++||++||+.|.+.++..++|..++++|||+|||++|.||||||+|+|++..|++|++++++.|.+|+ |+++++++|||
T Consensus 73 va~DL~~~~~~~~~~~~~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP 152 (345)
T 4h7p_A 73 VEAELEDCAFPLLDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP 152 (345)
T ss_dssp HHHHHHHTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hhhhhhhcCccCCCcEEEcCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999997 78899999999
Q ss_pred CCCcHHHHHHHHHH-cCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCce-eeEEeecCCCeeeecccCCCCCC----
Q 023853 84 VNSTVPIAAEVFKK-VGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPSC---- 156 (276)
Q Consensus 84 ~d~~~~v~t~~~~~-~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~-~~ViG~hgg~~~vp~~s~~~~~~---- 156 (276)
+| ++++++++ ++|+|++|+||. |.||++||+++||+++|++|++|+ .+|||||| +++||+||++++.+
T Consensus 153 vd----~~~~i~~~~~~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG-~t~vp~~s~a~v~g~~~~ 227 (345)
T 4h7p_A 153 AN----TNALILLKSAQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHS-STQVPDTDSAVIGTTPAR 227 (345)
T ss_dssp HH----HHHHHHHHHTTTCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSS-TTCEEECTTCEETTEEGG
T ss_pred cc----hHHHHHHHHccCCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCC-CeEEeeeccceECCccHH
Confidence 99 56655444 778888877777 999999999999999999999998 56899996 79999999998754
Q ss_pred -CCChhHH-HHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee--e-e-cCCC--CCccEE
Q 023853 157 -SLTPTEI-DYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA--Y-V-ASTV--TELPFF 228 (276)
Q Consensus 157 -~~~~~~~-~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s--~-~-~~~y--~~~~~~ 228 (276)
.++++.+ +++.++++++|++|++.| ++++.||+|+++++++++|+++ ++...++| + . +|+| ++++||
T Consensus 228 ~~~~~~~~~~~~~~~v~~~g~eIi~~k--g~ss~~s~a~a~~~~~~~~l~~---~~~~~~vs~~v~s~~g~YGi~~~v~~ 302 (345)
T 4h7p_A 228 EAIKDDALDDDFVQVVRGRGAEIIQLR--GLSSAMSAAKAAVDHVHDWIHG---TPEGVYVSMGVYSDENPYGVPSGLIF 302 (345)
T ss_dssp GGCCC------HHHHHHHHHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHC---CCTTCCEEEEEECTTCTTCCCSSCEE
T ss_pred HhcchhhHHHHHHHHHHhhhhhhhhcC--CCcchhhHHHHHHHHHHHHhcC---CCCceEEEEEEEeCCCCcCCCCCEEE
Confidence 2333333 579999999999999987 3578999999999999999997 34444433 2 2 5788 478999
Q ss_pred EEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 229 s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
|+||++| +|.+++++..+|+++|+++|++|+++|+++.+.+
T Consensus 303 s~Pv~~~-~G~~~iv~~l~l~~~e~~~l~~s~~~L~~E~~~A 343 (345)
T 4h7p_A 303 SFPCTCH-AGEWTVVSGKLNGDLGKQRLASTIAELQEERAQA 343 (345)
T ss_dssp EEEEEEE-TTEEEECCSCC-----CGGGHHHHHHHHHHHHHT
T ss_pred EEEEEEe-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999997 6888888765899999999999999999987653
No 20
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=100.00 E-value=6.3e-58 Score=418.57 Aligned_cols=241 Identities=20% Similarity=0.212 Sum_probs=223.6
Q ss_pred cccccccC-CcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDV-DSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~-~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+|+++|+ +++....+..++||+ +++|||+||+++|.|++|||+|+|++.+|++|++++++.+.+++|+++++++|||
T Consensus 62 ~a~DL~~~~~~~~~~~i~~t~d~~-~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP 140 (330)
T 3ldh_A 62 EMMDLEHGSLFLHTAKIVSGKDYS-VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL 140 (330)
T ss_dssp HHHHHHHHGGGSCCSEEEEESSSC-SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred HHHHhhhhhhcccCCeEEEcCCHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence 36788886 556677888899997 6999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChhH
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTE 162 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~~ 162 (276)
+| ++++++++.+|||++||||+ |.||++||++++|+++|+++++|+++|||||| ++++|+||+ +
T Consensus 141 vd----i~t~~~~k~sg~p~~rViG~gt~LDs~R~~~~lA~~lgv~~~~V~~~V~G~Hg-~t~vp~~S~----------~ 205 (330)
T 3ldh_A 141 GT----DKNKQDWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIGWVIGQHG-DSVPSVWSG----------M 205 (330)
T ss_dssp HH----HHHHHHHHHHCCCGGGEECCTTHHHHHHHHHHHHHHHTSCTTTCCEEECSSSS-TTCCEEEEE----------E
T ss_pred cH----HHHHHHHHHhCCCHHHeecccCchhHHHHHHHHHHHhCCCHHHeEEEEEcCCC-Cceeeechh----------h
Confidence 99 88899999999999999999 89999999999999999999999999999996 799999999 2
Q ss_pred H-HHHHHHHhcCccceeeccCCCCchhHHHHH-----------------HHHHHHHHHHhccCCCCCeeEee-eecCCCC
Q 023853 163 I-DYLTDRIQNGGTEVVEAKTGAGSATLSMAY-----------------AAAKFADACLRGLRGDAGVIECA-YVASTVT 223 (276)
Q Consensus 163 ~-~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~-----------------a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~ 223 (276)
| +++.++|+++|++|++. ||+++||+|+ ++++++++|+++ ++.++||| +++|+|+
T Consensus 206 ~~~~~~~~v~~~g~eii~~---kg~t~~a~a~~~~~~~~~~~~~~~~~~a~~~~~~ail~~---~~~v~~~s~~~~g~yg 279 (330)
T 3ldh_A 206 WDAKLHKDVVDSAYEVIKL---KGYTSWAIGLVVSNPVDVLTYVAWKGCSVADLAQTIMKD---LCRVHPVSTMVKDFYG 279 (330)
T ss_dssp EETTEEHHHHHCCCTTSTT---CHHHHHHHHHTTHHHHTTSSSCSCTHHHHHHHHHHHHHT---CCEEECCBCCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHc---cCCcceeeeeeccCccchhhhhhhHHHHHHHHHHHHHcC---CCceEEEEeecCCccC
Confidence 4 68889999999999985 5899999999 999999999995 78899998 7789984
Q ss_pred --CccEEEEeEEEcCCceEE--EccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 023853 224 --ELPFFASKVRLGRAGIEE--IYSLGPLNEYERAGLEKAKKELAGSIQK 269 (276)
Q Consensus 224 --~~~~~s~Pv~ig~~Gv~~--i~~~~~L~~~E~~~l~~sa~~i~~~~~~ 269 (276)
+++|||+||++| +|+++ ++++ +|+++|+++|++|++.|++.++.
T Consensus 280 ~~~~v~~s~P~~lg-~Gv~~~~iv~~-~L~~~E~~~l~~s~~~l~~~~~~ 327 (330)
T 3ldh_A 280 IKDNVFLSLPCVLN-NGISHCNIVKM-KLKPDEEQQLQKSATTLWDIQKD 327 (330)
T ss_dssp CCSCCCCBCCEEEB-TTBCTTCCCCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEEEEEC-CcEEEcceecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999 99999 9997 99999999999999999988764
No 21
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=100.00 E-value=6.1e-56 Score=404.05 Aligned_cols=252 Identities=21% Similarity=0.338 Sum_probs=227.7
Q ss_pred cccccccCCcccccceecC-CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQ-QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~-~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+|++.|++ ++++.+..+ +++ +|++|||+||+++|.|++||++|++++.+|+++++++++.|++++|++|++++|||
T Consensus 41 ~a~dl~~~~-~~~~~~~v~~~~~-~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP 118 (310)
T 2xxj_A 41 HAEDILHAT-PFAHPVWVWAGSY-GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNP 118 (310)
T ss_dssp HHHHHHTTG-GGSCCCEEEECCG-GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred HHHHHHHhH-hhcCCeEEEECCH-HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCc
Confidence 478888976 444444332 455 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCC-----
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCS----- 157 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~----- 157 (276)
+| ++|+++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+.
T Consensus 119 v~----~~t~~~~k~s~~p~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~~~~~~ 193 (310)
T 2xxj_A 119 VD----VMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHG-DSEVLVWSSAQVGGVPLLEF 193 (310)
T ss_dssp HH----HHHHHHHHHHTCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEEEEBCSS-TTCEEEEEEEEETTEEHHHH
T ss_pred hH----HHHHHHHHHcCCCHHHEEecCcchhHHHHHHHHHHHhCcCHHHeEEEEecccC-CccccchhhccCCCEEHHHH
Confidence 99 88999999999999999999 99999999999999999999999999999996 799999999876431
Q ss_pred -------CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEE
Q 023853 158 -------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFF 228 (276)
Q Consensus 158 -------~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~ 228 (276)
++++.++++.++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +.+|+|+ +++||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~t~~~~a~a~~~~~~ai~~~---~~~~~~vs~~~~G~yg~~~~~~ 267 (310)
T 2xxj_A 194 AEARGRALSPEDRARIDEGVRRAAYRIIEG---KGATYYGIGAGLARLVRAILTD---EKGVYTVSAFTPEVAGVLEVSL 267 (310)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHTHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEEEETTEEEEEE
T ss_pred hhhcccCCCHHHHHHHHHHHHHhhHHHHhc---cCCcHHHHHHHHHHHHHHHHcC---CCCEEEEEEEEcCccCCccEEE
Confidence 46667899999999999999985 4789999999999999999995 78899998 6688885 67999
Q ss_pred EEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 229 s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
|+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 268 ~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~ 308 (310)
T 2xxj_A 268 SLPRILGAGGVAGTVYP-SLSPEERAALRRSAEILKEAAFAL 308 (310)
T ss_dssp EEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997 999999999999999999998764
No 22
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=100.00 E-value=6.5e-55 Score=398.48 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=225.4
Q ss_pred ccccccCCcccc-cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 6 AQNKFDVDSRAV-RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 6 ~~~~~d~~~~~~-~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
+++++|+ .+.+ +.+..+.+..+|++|||+||+++|.|+++|++|++++.+|+++++++++.|++++|+++++++|||+
T Consensus 48 ~~dl~~~-~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 48 VMDLKHA-TPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp HHHHHHH-GGGSSSCCEEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred hhhHHhh-hhhcCCCeEEEeCCHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 5677786 4555 3333333344689999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-------
Q 023853 85 NSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC------- 156 (276)
Q Consensus 85 d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~------- 156 (276)
| ++|+++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+
T Consensus 127 ~----~~t~~~~k~~~~p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~~~~~~~ 201 (317)
T 3d0o_A 127 D----ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEHG-DTELPVWSHANIAGQPLKTLL 201 (317)
T ss_dssp H----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGCBCCEEBCSS-TTCEECTTTCEETTEEHHHHH
T ss_pred H----HHHHHHHHHhCCCHHHEEecCccccHHHHHHHHHHHhCcChhhEEEEEEecCC-CCeeEeeeccccCCEEHHHHh
Confidence 9 89999999999999999999 99999999999999999999999999999996 79999999987653
Q ss_pred ---CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEe
Q 023853 157 ---SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASK 231 (276)
Q Consensus 157 ---~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~P 231 (276)
.++++.++++.++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+|
T Consensus 202 ~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~~g~~~~~~~vP 275 (317)
T 3d0o_A 202 EQRPEGKAQIEQIFVQTRDAAYDIIQA---KGATYYGVAMGLARITEAIFRN---EDAVLTVSALLEGEYEEEDVYIGVP 275 (317)
T ss_dssp HTSTTHHHHHHHHHHHHHTHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHhhhhEEEeC---CCCchHhHHHHHHHHHHHHHcC---CCcEEEEEEeecCccCCCceEEEEE
Confidence 144556789999999999999984 5899999999999999999995 78899998 6688883 48999999
Q ss_pred EEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 232 VRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 232 v~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
|++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 276 ~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 3d0o_A 276 AVINRNGIRNVVEI-PLNDEEQSKFAHSAKTLKDIMAEAE 314 (317)
T ss_dssp EEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred EEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 9999999999999999999987654
No 23
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=1.6e-54 Score=396.05 Aligned_cols=253 Identities=20% Similarity=0.303 Sum_probs=219.1
Q ss_pred cccccccCCcccccceecC-CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 5 LAQNKFDVDSRAVRGFLGQ-QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 5 ~~~~~~d~~~~~~~~i~~~-~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+++++|+. ++++.+..+ +++ +|++|||+||+++|.|++||++|+|++.+|+++++++++.|.+++|+++++++|||
T Consensus 48 ~~~dl~~~~-~~~~~~~i~~~~~-~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP 125 (318)
T 1y6j_A 48 EAMDINHGL-PFMGQMSLYAGDY-SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNP 125 (318)
T ss_dssp HHHHHTTSC-CCTTCEEEC--CG-GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSS
T ss_pred HHHHHHHhH-HhcCCeEEEECCH-HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCc
Confidence 367888876 555555443 465 58999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----C-
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----S- 157 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----~- 157 (276)
+| ++++++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+ .
T Consensus 126 v~----~~~~~~~k~s~~p~~rviG~gt~Ld~~r~~~~la~~lgv~~~~v~~~v~G~HG-~t~~p~~s~~~v~g~~~~~~ 200 (318)
T 1y6j_A 126 VD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHG-DSQLPLWSCTHIAGKNINEY 200 (318)
T ss_dssp HH----HHHHHHHHHHTCCTTTEEECTTHHHHHHHHHHHHTTTTCCTTTEECCEEBCSS-SSCEECCTTCEETTBCSCCC
T ss_pred HH----HHHHHHHHHcCCCHHHEeccCCchHHHHHHHHHHHHhCCCHHHeEEEEecccC-CcEeeeehhceECCEEHHHH
Confidence 99 88899999999999999999 99999999999999999999999999999996 79999999987532 1
Q ss_pred -------CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEE
Q 023853 158 -------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFF 228 (276)
Q Consensus 158 -------~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~ 228 (276)
++++.++++.++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +.+|+|+ +++||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~t~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~G~yg~~~~~~ 274 (318)
T 1y6j_A 201 IDDPKCNFTEEDKKKIAEDVKTAGATIIKN---KGATYYGIAVSINTIVETLLKN---QNTIRTVGTVINGMYGIEDVAI 274 (318)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHT---CCCEECCEEEECSBTTBCSEEE
T ss_pred hhhhcccCCHHHHHHHHHHHHHhhHhHhhC---CCccHHHHHHHHHHHHHHHHcC---CCcEEEEEEeecCccCCcceEE
Confidence 12344689999999999999984 5899999999999999999995 78899998 6688884 68999
Q ss_pred EEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 229 s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
|+||++|++|+++++++ +|+++|+++|++|++.|++.++++.
T Consensus 275 ~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~ 316 (318)
T 1y6j_A 275 SLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNEVK 316 (318)
T ss_dssp ECCEEEETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997 9999999999999999999998754
No 24
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=100.00 E-value=1.4e-54 Score=394.92 Aligned_cols=255 Identities=28% Similarity=0.474 Sum_probs=222.9
Q ss_pred ccccccCCccc--ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 6 AQNKFDVDSRA--VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 6 ~~~~~d~~~~~--~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
+++++|+..+. ...++.++|+ ++++|||+||+++|.|+++|++|.+++.+|+++++++++.+.+++|+++++++|||
T Consensus 43 ~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP 121 (309)
T 1ur5_A 43 ALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNP 121 (309)
T ss_dssp HHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSS
T ss_pred HHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCc
Confidence 46677765433 2336677899 68999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----C
Q 023853 84 VNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-----S 157 (276)
Q Consensus 84 ~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~-----~ 157 (276)
+| ++++++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+ .
T Consensus 122 v~----~~t~~~~~~~~~~~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v~G~Hg-~t~~p~~s~~~v~g~~~~~~ 196 (309)
T 1ur5_A 122 LD----AMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHG-DEMVPLPRFSCISGIPVSEF 196 (309)
T ss_dssp HH----HHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEEECCEECSG-GGEECCGGGEEETTEEGGGT
T ss_pred hH----HHHHHHHHHcCCCHHHEEECCcchHHHHHHHHHHHHhCCChhheeEEEecCcC-CceeeeeecceeCCEeHHHH
Confidence 99 88899999999999999999 99999999999999999999999999999996 79999999987643 3
Q ss_pred CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEc
Q 023853 158 LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLG 235 (276)
Q Consensus 158 ~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig 235 (276)
+++++++++.++++++++++++. .+||++.||+|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+||++|
T Consensus 197 ~~~~~~~~~~~~v~~~g~eii~~-~~kgs~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~~g~~~~~~~vP~~ig 272 (309)
T 1ur5_A 197 IAPDRLAQIVERTRKGGGEIVNL-LKTGSAYYAPAAATAQMVEAVLKD---KKRVMPVAAYLTGQYGLNDIYFGVPVILG 272 (309)
T ss_dssp SCHHHHHHHHHHHHTHHHHHHHH-HSSCCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEEEEEE
T ss_pred cCHhHHHHHHHHHHhhhHHhhhh-ccCCCcHHHHHHHHHHHHHHHHcC---CCcEEEEEEEecCccCCcceEEEEEEEEe
Confidence 57888999999999999999985 246899999999999999999995 77899987 6688884 689999999999
Q ss_pred CCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 236 RAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 236 ~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 273 ~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 307 (309)
T 1ur5_A 273 AGGVEKILEL-PLNEEEMALLNASAKAVRATLDTLK 307 (309)
T ss_dssp TTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999997 9999999999999999999998754
No 25
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=100.00 E-value=5.3e-54 Score=390.17 Aligned_cols=251 Identities=24% Similarity=0.346 Sum_probs=225.9
Q ss_pred ccccccCCcccccceecC-CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 6 AQNKFDVDSRAVRGFLGQ-QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 6 ~~~~~d~~~~~~~~i~~~-~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
++++.|++. +.+.+..+ +++ ++++|||+||+++|.++++|++|.+++.+|+++++++++.+++++|+++++++|||+
T Consensus 45 ~~dl~~~~~-~~~~~~v~~~~~-~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 45 AADTNHGIA-YDSNTRVRQGGY-EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp HHHHHHHHT-TTCCCEEEECCG-GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred HHHHHHHHh-hCCCcEEEeCCH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 567777654 33333332 354 589999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCC---CCCCh
Q 023853 85 NSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS---CSLTP 160 (276)
Q Consensus 85 d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~---~~~~~ 160 (276)
| ++|+++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++.+. ..+++
T Consensus 123 ~----~~~~~~~~~~~~p~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~~v~G~HG-~~~~p~~s~~~v~g~p~~~~~ 197 (303)
T 1o6z_A 123 D----LLNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTILGEHG-DAQVPVFSKVSVDGTDPEFSG 197 (303)
T ss_dssp H----HHHHHHHHHSSSCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEECCEEECSS-TTEEECGGGCEETTBCCCCCH
T ss_pred H----HHHHHHHHHcCCCHHHeeecccchhHHHHHHHHHHHhCcCHHHeEEEEEeCCC-CccccCCcccccCCcCccCCH
Confidence 9 89999999999999999999 99999999999999999999999999999996 7999999998643 23478
Q ss_pred hHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCc
Q 023853 161 TEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAG 238 (276)
Q Consensus 161 ~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~G 238 (276)
++++++.++++++++++++ +||+++||+|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+||++|++|
T Consensus 198 ~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~~g~~~~~~~~P~~ig~~G 271 (303)
T 1o6z_A 198 DEKEQLLGDLQESAMDVIE---RKGATEWGPARGVAHMVEAILHD---TGEVLPASVKLEGEFGHEDTAFGVPVSLGSNG 271 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TTSSCCHHHHHHHHHHHHHHHTT---CCCEEEEEEEEESGGGCEEEEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHHhHHHHh---cCCChHHHHHHHHHHHHHHHHhC---CCCEEEEEEecCCccCCcceEEEEEEEEeCCe
Confidence 8899999999999999998 46899999999999999999995 78899987 6688884 689999999999999
Q ss_pred eEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 239 IEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 239 v~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 272 v~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 302 (303)
T 1o6z_A 272 VEEIVEW-DLDDYEQDLMADAAEKLSDQYDKI 302 (303)
T ss_dssp EEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEecCC-CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999997 999999999999999999998753
No 26
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=100.00 E-value=4.5e-53 Score=383.86 Aligned_cols=243 Identities=16% Similarity=0.195 Sum_probs=214.2
Q ss_pred ccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 6 AQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 6 ~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
+|++.+++.+ .+..++|+ ++++|||+||+++|.+ +|||+|++++.+|+++++++++.+.+++|++|++++|||+|
T Consensus 55 a~dl~~~~~~---~i~~t~d~-~~l~~aD~Vi~aag~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~ 129 (303)
T 2i6t_A 55 TMDLEIFNLP---NVEISKDL-SASAHSKVVIFTVNSL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 129 (303)
T ss_dssp HHHHHHHTCT---TEEEESCG-GGGTTCSEEEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH
T ss_pred HHHHhhhcCC---CeEEeCCH-HHHCCCCEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH
Confidence 4566666555 46667899 6899999999999996 89999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCCCChhHHH
Q 023853 86 STVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEID 164 (276)
Q Consensus 86 ~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~~~~~~~~ 164 (276)
++|+++++.+|||++||||+ |.||++|+++++|+++|+++++|+++|||||| ++++|+||+... .+ .+
T Consensus 130 ----~~t~~~~~~~~~p~~rviG~gt~Ld~~R~~~~la~~lgv~~~~v~~~v~G~Hg-~s~~p~~s~~~~--~~----~~ 198 (303)
T 2i6t_A 130 ----IMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQG-EDKVLTWSGQEE--VV----SH 198 (303)
T ss_dssp ----HHHHHHHHHHCCCGGGEEECTTHHHHHHHHHHHHHTSCCTTGGGGEEEEBSCS-SSCEEEEBCSSC--CC----CH
T ss_pred ----HHHHHHHHhcCCCHHHeeCCCCCchHHHHHHHHHHHcCCChHHeEEEEecCCC-CCcccccccccc--cc----HH
Confidence 99999999999999999999 99999999999999999999999999999996 799999999631 12 25
Q ss_pred HHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCC--CCccEEEEeEEEcCCceEE
Q 023853 165 YLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVRLGRAGIEE 241 (276)
Q Consensus 165 ~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y--~~~~~~s~Pv~ig~~Gv~~ 241 (276)
++.++++++++++++ +||+++||+|.++++++++|+++ ++.+++++ +.+|+| ++++|||+||++|++|+++
T Consensus 199 ~~~~~~~~~g~eii~---~kGst~~~~a~a~~~i~~ai~~~---~~~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~ 272 (303)
T 2i6t_A 199 TSQVQLSNRAMELLR---VKGQRSWSVGLSVADMVDSIVNN---KKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSE 272 (303)
T ss_dssp HHHHHHHHHHHTTSS---SCCCCHHHHHHHHHHHHHHHHTT---CCEEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHH---ccCchHHhHHHHHHHHHHHHHcC---CCcEEEEEEEeCCccCCCCCeEEEEEEEEECCccEE
Confidence 677788899999998 56899999999999999999995 67899998 668888 3689999999999999999
Q ss_pred EccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 242 IYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 242 i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
++++++|+++|+++|++|++.|++.+++.
T Consensus 273 i~~~~~l~~~e~~~l~~s~~~l~~~~~~~ 301 (303)
T 2i6t_A 273 VIKTTLKEDTVTEKLQSSASSIHSLQQQL 301 (303)
T ss_dssp ECCBCC-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 98876799999999999999999988754
No 27
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=100.00 E-value=5.8e-53 Score=384.94 Aligned_cols=252 Identities=24% Similarity=0.394 Sum_probs=221.7
Q ss_pred ccccccCCccccc---ceecCCC-HHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 6 AQNKFDVDSRAVR---GFLGQQQ-LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 6 ~~~~~d~~~~~~~---~i~~~~d-~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+|++.|++ +.+. .+..++| +.++++|||+||+++|.|+++|++|.+++.+|+++++++++.+++++ +++++++|
T Consensus 45 ~~dl~~~~-~~~~~~~~i~~~~d~l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S 122 (313)
T 1hye_A 45 REDIYDAL-AGTRSDANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT 122 (313)
T ss_dssp HHHHHHHH-TTSCCCCEEEEEETTCGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred HHHHHHhH-HhcCCCeEEEeCCcchHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 46677755 4442 4444444 56799999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----
Q 023853 82 NPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC---- 156 (276)
Q Consensus 82 NP~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~---- 156 (276)
||+| ++|+++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++.+.+
T Consensus 123 NPv~----~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~~v~G~Hg-~~~~p~~s~~~v~g~~~~ 197 (313)
T 1hye_A 123 NPVD----VMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRIIGEHG-DSMVPLLSATSIGGIPIQ 197 (313)
T ss_dssp SSHH----HHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEECSS-TTEEECGGGCEETTEEGG
T ss_pred CcHH----HHHHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEEEEeeccC-CcccceeeccccCCEEHH
Confidence 9999 88999999999999999999 99999999999999999999999999999996 79999999987653
Q ss_pred -C--CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCC-C-CccEEEE
Q 023853 157 -S--LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV-T-ELPFFAS 230 (276)
Q Consensus 157 -~--~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y-~-~~~~~s~ 230 (276)
. ++++.++++.++++++++++++ +||+++||+|.++++++++|+++ ++.+++++ +.+|+| + +++|||+
T Consensus 198 ~~~~~~~~~~~~~~~~v~~~g~eii~---~kgs~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~~~g~~~~~~~~ 271 (313)
T 1hye_A 198 KFERFKELPIDEIIEDVKTKGEQIIR---LKGGSEFGPAAAILNVVRCIVNN---EKRLLTLSAYVDGEFDGIRDVCIGV 271 (313)
T ss_dssp GCGGGGGCCHHHHHHHHHHHTTSCCC---------CCHHHHHHHHHHHHHTT---CCEEEEEEEEEESSSSSCEEEEEEE
T ss_pred HHhcCCHHHHHHHHHHHHhccceeec---CCCCcHHHHHHHHHHHHHHHHcC---CCeEEEEEEeecceecCccceEEEE
Confidence 1 3666789999999999999998 45899999999999999999995 67889998 668888 4 5899999
Q ss_pred eEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 231 KVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 231 Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
||++|++|+++++++ +|+++|+++|++|++.|++.+++..
T Consensus 272 P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~~ 311 (313)
T 1hye_A 272 PVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEEVK 311 (313)
T ss_dssp EEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999997 9999999999999999999998764
No 28
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=100.00 E-value=4.7e-53 Score=386.04 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=224.0
Q ss_pred cccccccCCccccc-ceec-CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 5 LAQNKFDVDSRAVR-GFLG-QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 5 ~~~~~~d~~~~~~~-~i~~-~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
+++++.|. .+.+. .+.. ++++ ++++|||+||+++|.++++|++|.+++.+|+++++++++.+++++|+++++++||
T Consensus 47 ~~~dl~~~-~~~~~~~~~i~~~~~-~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 47 DAMDFNHG-KVFAPKPVDIWHGDY-DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp HHHHHHHH-TTSSSSCCEEEECCG-GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred HHhhHHHH-hhhcCCCeEEEcCcH-HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 35677774 33331 2222 3455 5899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----
Q 023853 83 PVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----- 156 (276)
Q Consensus 83 P~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----- 156 (276)
|+| ++++++++.+|+|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+
T Consensus 125 Pv~----~~~~~~~~~s~~p~~rviG~gt~lD~~r~~~~la~~l~v~~~~v~~~v~G~HG-~~~~p~~s~~~v~g~~~~~ 199 (316)
T 1ldn_A 125 PVD----ILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHG-DTELPVWSQAYIGVMPIRK 199 (316)
T ss_dssp SHH----HHHHHHHHHHTCCGGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEEEEBCSS-TTCEEEEEEEEETTEESTT
T ss_pred chH----HHHHHHHHHhCCCHHHEEecccchHHHHHHHHHHHHhCCCHHHeEEEEecccC-CceeeeehhccCCCEEHHH
Confidence 999 89999999999999999999 99999999999999999999999999999996 79999999987542
Q ss_pred C------CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEE
Q 023853 157 S------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFF 228 (276)
Q Consensus 157 ~------~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~ 228 (276)
. ++++.++++.++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +.+|+|+ +++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~v~~~g~eii~~---kg~~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~yg~~~~~~ 273 (316)
T 1ldn_A 200 LVESKGEEAQKDLERIFVNVRDAAYQIIEK---KGATYYGIAMGLARVTRAILHN---ENAILTVSAYLDGLYGERDVYI 273 (316)
T ss_dssp TSGGGTTTHHHHHHHHHHHHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESTTSCEEEEE
T ss_pred HhhccccCCHHHHHHHHHHHHHhHHHHHhc---cCCcHHHHHHHHHHHHHHHHhC---CCcEEEEEEEecCccCCcceEE
Confidence 1 34556789999999999999985 4789999999999999999995 78889998 6688884 68999
Q ss_pred EEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 229 s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
|+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 274 ~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 314 (316)
T 1ldn_A 274 GVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARA 314 (316)
T ss_dssp EEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 999999999999999999999875
No 29
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=100.00 E-value=2.9e-52 Score=381.68 Aligned_cols=253 Identities=26% Similarity=0.428 Sum_probs=226.8
Q ss_pred ccccccCCccc--ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 023853 6 AQNKFDVDSRA--VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMT-----RDDLFNINAGIVKTLCEGIAKCCPKAIVN 78 (276)
Q Consensus 6 ~~~~~d~~~~~--~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~-----r~~~~~~N~~i~~~i~~~i~~~~p~~~vi 78 (276)
+++++++..+. ...++.++|+ ++++|||+||+++|.|+++|++ |.+++.+|+++++++++.|.+++|+++++
T Consensus 45 ~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~ii 123 (322)
T 1t2d_A 45 ALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123 (322)
T ss_dssp HHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 34555543222 2347778899 6999999999999999999999 99999999999999999999999999999
Q ss_pred EecCCCCCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-
Q 023853 79 LISNPVNSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC- 156 (276)
Q Consensus 79 vvtNP~d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~- 156 (276)
++|||+| ++|+++++.+|||++||||+ |.||++||+++||+++|+++++|+++|||||| ++++|+||++.+.+
T Consensus 124 v~tNP~~----~~t~~~~~~~g~~~~rviG~gt~ld~~R~~~~la~~lgv~~~~v~~~v~G~HG-~~~~p~~s~~~v~g~ 198 (322)
T 1t2d_A 124 VVTNPVD----VMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHIVGAHG-NKMVLLKRYITVGGI 198 (322)
T ss_dssp ECSSSHH----HHHHHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSS-TTCEECGGGCEETTE
T ss_pred EecCChH----HHHHHHHHhcCCChHHEEeccCcccHHHHHHHHHHHhCCCHHHeEEEEEcCCC-CcEEeeHHHceECcE
Confidence 9999999 88888999999999999999 79999999999999999999999999999996 79999999987642
Q ss_pred ---------CCChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-Cc
Q 023853 157 ---------SLTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-EL 225 (276)
Q Consensus 157 ---------~~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~ 225 (276)
.++++.++++.++++++++++++.| |+++||+|.++++++++|+++ ++.+++++ +.+|+|+ ++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k---gs~~~~~a~a~~~~~~ai~~~---~~~v~~~s~~~~g~~g~~~ 272 (322)
T 1t2d_A 199 PLQEFINNKLISDAELEAIFDRTVNTALEIVNLH---ASPYVAPAAAIIEMAESYLKD---LKKVLICSTLLEGQYGHSD 272 (322)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHT---SSCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEE
T ss_pred eHHHhccccCCCHHHHHHHHHHHHHHHHHHHhcc---CchHHHHHHHHHHHHHHHHhC---CCCEEEEEEEecCccCCCc
Confidence 1466778999999999999999864 789999999999999999995 78899987 6688885 68
Q ss_pred cEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 226 PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 226 ~~~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
+|||+||++|++|+++++++ +|+++|+++|++|++.|++.++.+-
T Consensus 273 ~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~L~~~~~~~~ 317 (322)
T 1t2d_A 273 IFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAETKRMKALAH 317 (322)
T ss_dssp EEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred eEEEEEEEEeCCeeEEeCCC-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999997 9999999999999999999987753
No 30
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=100.00 E-value=1.7e-51 Score=377.54 Aligned_cols=243 Identities=32% Similarity=0.536 Sum_probs=224.0
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
..++.++|+ ++++|||+||+++|.|++||++|.|++.+|+++++++++.+.+++|+++++++|||+| ++|+++++
T Consensus 69 ~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~----~~t~~~~~ 143 (328)
T 2hjr_A 69 AKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLD----AMVYYFKE 143 (328)
T ss_dssp CCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH----HHHHHHHH
T ss_pred CEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchH----HHHHHHHH
Confidence 357788999 6999999999999999999999999999999999999999999999999999999999 88999999
Q ss_pred cCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----------CCChhHHHHH
Q 023853 98 VGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------SLTPTEIDYL 166 (276)
Q Consensus 98 ~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----------~~~~~~~~~i 166 (276)
.+||||+||||+ |.||++|+++++|+++|+++++|+++|||||| ++++|+||++.+.+ .+++++++++
T Consensus 144 ~~~~~~~rviG~~t~Ld~~R~~~~la~~lgv~~~~v~~~v~G~Hg-~t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~ 222 (328)
T 2hjr_A 144 KSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAIVVGGHG-DEMIPLTSSVTIGGILLSDFVEQGKITHSQINEI 222 (328)
T ss_dssp HHCCCGGGEEESCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSS-TTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHH
T ss_pred hcCCChhhEEEeCcHHHHHHHHHHHHHHhCCCHHHeeEEEecCCC-CceeeeeeeceECCEEHHHHhhccCCCHHHHHHH
Confidence 999999999999 69999999999999999999999999999997 79999999987643 1466778899
Q ss_pred HHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCceEEEcc
Q 023853 167 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGIEEIYS 244 (276)
Q Consensus 167 ~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv~~i~~ 244 (276)
.++++++|+++++.. +||++.||+|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+||++|++|++++++
T Consensus 223 ~~~v~~~g~eii~~~-~~gs~~~~~a~a~~~i~~ai~~~---~~~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~ 298 (328)
T 2hjr_A 223 IKKTAFGGGEIVELL-KTGSAFYAPAASAVAMAQAYLKD---SKSVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVI 298 (328)
T ss_dssp HHHHHTHHHHHHHHH-SSCCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECC
T ss_pred HHHHHhhHHHHHhhh-CCCchHHHHHHHHHHHHHHHHcC---CCcEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecC
Confidence 999999999999863 57899999999999999999995 77899997 6688884 689999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 245 LGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 245 ~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
+ +|+++|+++|++|++.|++.++++.
T Consensus 299 ~-~L~~~e~~~l~~s~~~l~~~~~~~~ 324 (328)
T 2hjr_A 299 V-NLSDDEKSLFSKSVESIQNLVQDLK 324 (328)
T ss_dssp C-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 9999999999999999999998775
No 31
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=100.00 E-value=1.6e-51 Score=374.87 Aligned_cols=244 Identities=32% Similarity=0.512 Sum_probs=223.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHc
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 98 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~ 98 (276)
.+..++|++ ++++||+||++.+.|+++|++|.+++.+|+++++++++.+.+++|+++++++|||+| .+++++++.
T Consensus 57 ~i~~t~d~~-~l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~----~~~~~~~~~ 131 (310)
T 1guz_A 57 KVTGSNDYA-DTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLD----IMTHVAWVR 131 (310)
T ss_dssp EEEEESCGG-GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHH----HHHHHHHHH
T ss_pred EEEECCCHH-HHCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchH----HHHHHHHHh
Confidence 467788997 499999999999999999999999999999999999999999999999999999999 788888999
Q ss_pred CCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----CCChhHHHHHHHHHhc
Q 023853 99 GTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-----SLTPTEIDYLTDRIQN 172 (276)
Q Consensus 99 ~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~-----~~~~~~~~~i~~~v~~ 172 (276)
+++|++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++.+.+ .+++++++++.+++++
T Consensus 132 ~~~~~~rviG~gt~ld~~r~~~~la~~l~v~~~~v~~~v~G~Hg-~~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~ 210 (310)
T 1guz_A 132 SGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGGHG-DAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRN 210 (310)
T ss_dssp HCSCGGGEEEECHHHHHHHHHHHHHHHHTCCGGGEECCEEECSG-GGEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHT
T ss_pred cCCChHHEEECCCchHHHHHHHHHHHHhCCCHHHeEEEEEcccC-CcEeeeeecccCCCEEHHHHCCHHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999997 89999999998754 2577789999999999
Q ss_pred CccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCceEEEccCCCCCH
Q 023853 173 GGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGIEEIYSLGPLNE 250 (276)
Q Consensus 173 ~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv~~i~~~~~L~~ 250 (276)
+++++++. .+||++.||+|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+||++|++|+++++++ +|++
T Consensus 211 ~g~~ii~~-~~kgs~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~ 285 (310)
T 1guz_A 211 GGAEIVEH-LKQGSAFYAPASSVVEMVESIVLD---RKRVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQ 285 (310)
T ss_dssp HHHHHHHH-HSSSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCH
T ss_pred hHHHHHhh-cCCCCcHHHHHHHHHHHHHHHHcC---CCcEEEEEEeecCccCCcceEEEEEEEEeCCeeEEEcCC-CCCH
Confidence 99999985 246899999999999999999995 77899987 6688884 6899999999999999999997 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Q 023853 251 YERAGLEKAKKELAGSIQKGVSF 273 (276)
Q Consensus 251 ~E~~~l~~sa~~i~~~~~~~~~~ 273 (276)
+|+++|++|++.|++.++++.+.
T Consensus 286 ~e~~~l~~s~~~l~~~~~~~~~~ 308 (310)
T 1guz_A 286 ADLDLLQKSAKIVDENCKMLEST 308 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999876554
No 32
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=100.00 E-value=2.5e-51 Score=376.82 Aligned_cols=245 Identities=28% Similarity=0.490 Sum_probs=224.7
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHH
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGM-----TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAA 92 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t 92 (276)
..+..|+|++++++|||+||+++|.|+++|+ +|.+++.+|+++++++++.|.+++|+++++++|||+| ++|
T Consensus 64 ~~i~~t~d~~ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~----~~t 139 (331)
T 1pzg_A 64 VSVRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLD----CMV 139 (331)
T ss_dssp CCEEEECSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHH----HHH
T ss_pred CEEEEeCCHHHHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchH----HHH
Confidence 3577789999899999999999999999999 9999999999999999999999999999999999999 888
Q ss_pred HHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----------CCChh
Q 023853 93 EVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------SLTPT 161 (276)
Q Consensus 93 ~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----------~~~~~ 161 (276)
+++++.+|||++||||+ |.||++|++++||+++|+++++|+++|||+|| ++++|+||++++.+ .++++
T Consensus 140 ~~~~~~~~~~~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v~G~Hg-~~~~p~~s~~~v~G~~~~~~~~~~~~~~~ 218 (331)
T 1pzg_A 140 KVMCEASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQATVIGTHG-DCMVPLVRYITVNGYPIQKFIKDGVVTEK 218 (331)
T ss_dssp HHHHHHHCCCGGGEEECCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSS-TTCEECGGGCEETTEEHHHHHHTTSSCHH
T ss_pred HHHHHhcCCChhcEEeccchHHHHHHHHHHHHHhCCCHHHceEEEecCCC-CCEeeeeecceECCEEHHHHhhcccCCHH
Confidence 99999999999999999 79999999999999999999999999999996 79999999987644 15666
Q ss_pred HHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCce
Q 023853 162 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGI 239 (276)
Q Consensus 162 ~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv 239 (276)
.++++.++++++|+++++.. +||++.||+|.++++++++|+++ ++.+++++ +.+|+|+ ++++||+||++|++|+
T Consensus 219 ~~~~~~~~~~~~g~eii~~~-~kgst~~~~a~a~~~ii~ai~~~---~~~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv 294 (331)
T 1pzg_A 219 QLEEIAEHTKVSGGEIVRFL-GQGSAYYAPAASAVAMATSFLND---EKRVIPCSVYCNGEYGLKDMFIGLPAVIGGAGI 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEEESGGGCEEEEEEEEEEEETTEE
T ss_pred HHHHHHHHHHhccHHHHHhh-cCCCccchHHHHHHHHHHHHHhC---CCcEEEEEEEecCccCCCceEEEEEEEEeCCee
Confidence 78889999999999999842 46899999999999999999995 77899987 6688884 6899999999999999
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 023853 240 EEIYSLGPLNEYERAGLEKAKKELAGSIQKGVS 272 (276)
Q Consensus 240 ~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~~~ 272 (276)
++++++ +|+++|+++|++|++.|++.+++...
T Consensus 295 ~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~~~ 326 (331)
T 1pzg_A 295 ERVIEL-ELNEEEKKQFQKSVDDVMALNKAVAA 326 (331)
T ss_dssp EEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCC-CCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999997 99999999999999999999987643
No 33
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=100.00 E-value=1.8e-50 Score=370.81 Aligned_cols=258 Identities=20% Similarity=0.238 Sum_probs=229.9
Q ss_pred ccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 023853 6 AQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPV 84 (276)
Q Consensus 6 ~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~ 84 (276)
+|++.|++.+.+.++..++|+.++++|||+||+++|.++++|++|.+++.+|+++++++++.+++++ |+++++++|||+
T Consensus 57 ~~dl~~~~~~~~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 57 MMEIDDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp HHHHHTTTCTTEEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHHHhhhcccccCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 5678887667788999999998999999999999999999999999999999999999999999997 999999999999
Q ss_pred CCcHHHHHHHHHHcC-CCCCCCEEEEeechHHHHHHHHHHHhCCCCCCcee-eEEeecCCCeeeecccCCCCCCC-----
Q 023853 85 NSTVPIAAEVFKKVG-TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDV-PVVGGHAGVTILPLLSQVKPSCS----- 157 (276)
Q Consensus 85 d~~~~v~t~~~~~~~-~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~-~ViG~hgg~~~vp~~s~~~~~~~----- 157 (276)
| ++++++++.+ |||++||+|+|.||+.|+++++|+++|+++++|++ +|||||| ++++|+||++.+.+.
T Consensus 137 ~----~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg-~s~~p~~s~~~v~g~~~~~~ 211 (329)
T 1b8p_A 137 N----TNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS-PTMYADYRYAQIDGASVKDM 211 (329)
T ss_dssp H----HHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS-TTCEEECSSCEETTEEHHHH
T ss_pred H----HHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC-CcEeeehHHCeECCeeHHHH
Confidence 9 8888888888 99999999999999999999999999999999995 6899997 799999999987541
Q ss_pred CChhH--HHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCC--CCccEEEEeE
Q 023853 158 LTPTE--IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKV 232 (276)
Q Consensus 158 ~~~~~--~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y--~~~~~~s~Pv 232 (276)
+++++ .+++.+++++++++|++.| |. +..++.|.++++++++|+++. ++.++|++ +.+|+| ++++|||+||
T Consensus 212 ~~~~~~~~~~i~~~v~~~g~eii~~k-g~-~~~~~~a~a~~~~~~ai~~~~--~~~~~~~s~~~~g~yg~~~~~~~s~P~ 287 (329)
T 1b8p_A 212 INDDAWNRDTFLPTVGKRGAAIIDAR-GV-SSAASAANAAIDHIHDWVLGT--AGKWTTMGIPSDGSYGIPEGVIFGFPV 287 (329)
T ss_dssp HCCHHHHHHTHHHHHHTHHHHHHHHH-SS-CCHHHHHHHHHHHHHHHHHCC--TTCCEEEEEECCSGGGCCTTCEEEEEE
T ss_pred hccchhhHHHHHHHHHHHHHhhhhcc-CC-ChHHHHHHHHHHHHHHHhcCC--CCcEEEEEEEecCccCCCCCeEEEEEE
Confidence 23334 3789999999999999987 43 233445779999999999962 56789998 557878 4789999999
Q ss_pred EEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhhh
Q 023853 233 RLGRAGIEEIYS-LGPLNEYERAGLEKAKKELAGSIQKGVSFV 274 (276)
Q Consensus 233 ~ig~~Gv~~i~~-~~~L~~~E~~~l~~sa~~i~~~~~~~~~~~ 274 (276)
+| ++|++++++ + +|+++|+++|++|++.|++.++.+.+++
T Consensus 288 ~i-~~Gv~~i~~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~~ 328 (329)
T 1b8p_A 288 TT-ENGEYKIVQGL-SIDAFSQERINVTLNELLEEQNGVQHLL 328 (329)
T ss_dssp EE-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred EE-cCCEEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99 999999998 7 9999999999999999999999998876
No 34
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=100.00 E-value=1.4e-50 Score=367.74 Aligned_cols=246 Identities=22% Similarity=0.303 Sum_probs=194.8
Q ss_pred ccccccCCcccccceecC-CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 6 AQNKFDVDSRAVRGFLGQ-QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 6 ~~~~~d~~~~~~~~i~~~-~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
++++.|+. +++.....+ +|+ ++++|||+||+++|.|++||++|.|++.+|+++++++++.+.+++|+++++++|||+
T Consensus 42 ~~~l~~~~-~~~~~~~i~~~~~-~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 42 AEDIAHAA-PVSHGTRVWHGGH-SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPV 119 (304)
T ss_dssp HHHHTTSC-CTTSCCEEEEECG-GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSH
T ss_pred HHhhhhhh-hhcCCeEEEECCH-HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCch
Confidence 56667755 333333222 577 489999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCCC------
Q 023853 85 NSTVPIAAEVFKKVGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCS------ 157 (276)
Q Consensus 85 d~~~~v~t~~~~~~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~~------ 157 (276)
| ++++++++.+ |++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+.
T Consensus 120 ~----~~~~~~~~~~--~~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~~~v~G~Hg-~~~~p~~s~~~v~g~~~~~~~ 192 (304)
T 2v6b_A 120 D----LLTDLATQLA--PGQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGYVLGEHG-DSEVLAWSSAMVAGMPVADFM 192 (304)
T ss_dssp H----HHHHHHHHHS--CSSCEEECTTHHHHHHHHHHHHHHHTSCGGGEECCEEESSS-TTEEECGGGCEETTEEHHHHH
T ss_pred H----HHHHHHHHhC--ChhcEEeCCcCchHHHHHHHHHHHhCcCHHHceEEEecCCC-CceeeehhHccCCCEEHHHHh
Confidence 9 7888888886 89999999 99999999999999999999999999999996 799999999987541
Q ss_pred ------CChhHHHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCCCccEEEE
Q 023853 158 ------LTPTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVTELPFFAS 230 (276)
Q Consensus 158 ------~~~~~~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~~~~~~s~ 230 (276)
++++.++++.++++++++++++ +||+++|++|.++++++++|+++ ++.++|++ +++| |+ +|||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~v~~~~~eii~---~kg~t~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g-yg--~~~~~ 263 (304)
T 2v6b_A 193 QAQNLPWNEQVRAKIDEGTRNAAASIIE---GKRATYYGIGAALARITEAVLRD---RRAVLTVSAPTPE-YG--VSLSL 263 (304)
T ss_dssp HHHTCCCSHHHHHHHHHHHTC--------------CCHHHHHHHHHHHHHHHTT---CCEEEEEEEEETT-TT--EEEEE
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHh---ccCCcHHHHHHHHHHHHHHHHhC---CCcEEEEEEEECC-cC--cEEEE
Confidence 4666789999999999999998 45899999999999999999995 78899998 6688 84 99999
Q ss_pred eEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 231 KVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 231 Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus 264 P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~ 302 (304)
T 2v6b_A 264 PRVVGRQGVLSTLHP-KLTGDEQQKLEQSAGVLRGFKQQL 302 (304)
T ss_dssp EEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC-----
T ss_pred EEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999997 999999999999999999988754
No 35
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=2.2e-47 Score=348.85 Aligned_cols=238 Identities=29% Similarity=0.492 Sum_probs=217.4
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHcC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 99 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~~ 99 (276)
+..+ |+ +++++||+||++.+.++++|++|.|++.+|+++++++++.|.+++|+++++++|||+| ++++++++.+
T Consensus 57 i~~~-d~-~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~----~~~~~~~~~~ 130 (319)
T 1a5z_A 57 IYAG-DY-ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD----VLTYFFLKES 130 (319)
T ss_dssp EEEC-CG-GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH----HHHHHHHHHH
T ss_pred EEeC-CH-HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH----HHHHHHHHHh
Confidence 4444 66 4899999999999999999999999999999999999999999999999999999999 7888888888
Q ss_pred CCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----------C-CChhHHHHHH
Q 023853 100 TYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------S-LTPTEIDYLT 167 (276)
Q Consensus 100 ~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----------~-~~~~~~~~i~ 167 (276)
+||++||||+ |.||+.|+++++|+++|+++++|+++|||||| ++++|+||++++.+ . ++++.++++.
T Consensus 131 ~~~~~rviG~~t~ld~~r~~~~la~~lgv~~~~v~~~v~G~hg-~~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~ 209 (319)
T 1a5z_A 131 GMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYVIGEHG-DSEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFA 209 (319)
T ss_dssp TCCTTTEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBCSS-TTCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHH
T ss_pred CCChhhEEeeCccHHHHHHHHHHHHHhCcCHHHceEEEEeCCC-CCcccchhhceECCEEHHHHhhcccccCHHHHHHHH
Confidence 9999999999 89999999999999999999999999999995 79999999987643 1 4666788999
Q ss_pred HHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCceEEEccC
Q 023853 168 DRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGIEEIYSL 245 (276)
Q Consensus 168 ~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv~~i~~~ 245 (276)
++++++++++++. ||+++|++|.++++++++|+++ ++.+++++ +.+|+|+ +++|||+||++|++|+++++++
T Consensus 210 ~~v~~~g~eii~~---kg~~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~ 283 (319)
T 1a5z_A 210 EKTKRAAYEIIER---KGATHYAIALAVADIVESIFFD---EKRVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL 283 (319)
T ss_dssp HHHHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC
T ss_pred HHHHHhhhhhhcc---CCchHHHHHHHHHHHHHHHHhC---CCCEEEEEEEecCccCccceEEEEEEEEeCCceEEEecC
Confidence 9999999999985 4789999999999999999995 77899998 5678884 6899999999999999999997
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 246 GPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 246 ~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
+|+++|+++|++|++.|++.++++.
T Consensus 284 -~L~~~e~~~l~~s~~~l~~~~~~~~ 308 (319)
T 1a5z_A 284 -NLNEEELEAFRKSASILKNAINEIT 308 (319)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999998763
No 36
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=100.00 E-value=4e-46 Score=338.91 Aligned_cols=235 Identities=21% Similarity=0.317 Sum_probs=210.3
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHc
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRK----PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV 98 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k----~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~ 98 (276)
++|+ +++++||+||++.+.+++ ||++|++++.+|+++++++++.+.+++|+++++++|||+| ++++++++.
T Consensus 61 ~~d~-~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~----~~~~~~~~~ 135 (309)
T 1hyh_A 61 INDW-AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD----VITALFQHV 135 (309)
T ss_dssp ESCG-GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH----HHHHHHHHH
T ss_pred eCCH-HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH----HHHHHHHHh
Confidence 4688 689999999999999998 9999999999999999999999999999999999999999 889999999
Q ss_pred CCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----C--CChhHHHHHHHHH
Q 023853 99 GTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-----S--LTPTEIDYLTDRI 170 (276)
Q Consensus 99 ~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~-----~--~~~~~~~~i~~~v 170 (276)
+++|++||+|+ |.||+.|+++.+|++++++++++++++||+|| ++++|+||++.+.+ . ++++.|+++.+++
T Consensus 136 ~~~~~~rvig~gt~ld~~r~~~~~a~~l~~~~~~v~~~v~G~hg-~~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v 214 (309)
T 1hyh_A 136 TGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVSGYNLGEHG-NSQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEA 214 (309)
T ss_dssp HCCCGGGEEECTTHHHHHHHHHHHHHHHTCCGGGCBCCEEBCTT-TTCEECTTTCEETTEEGGGC-----CCHHHHHHHH
T ss_pred cCCCHHHEeecCccchHHHHHHHHHHHhCCChhheEEEEEeCCC-CcEeeccccceECCEEHHHhccCCHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999995 79999999987643 1 4667789999999
Q ss_pred hcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCCCccEEEEeEEEcCCceEEEccCCCCC
Q 023853 171 QNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVTELPFFASKVRLGRAGIEEIYSLGPLN 249 (276)
Q Consensus 171 ~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~~~~~~s~Pv~ig~~Gv~~i~~~~~L~ 249 (276)
+++++++++.| |++.|++|.++++++++|+++ ++.+++++ +.+| ++.++|+||++|++|+++++++ +|+
T Consensus 215 ~~~g~~ii~~k---g~~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~g---~~~~~~vP~~i~~~Gv~~i~~~-~l~ 284 (309)
T 1hyh_A 215 RKGGFTVLNGK---GYTSYGVATSAIRIAKAVMAD---AHAELVVSNRRDD---MGMYLSYPAIIGRDGVLAETTL-DLT 284 (309)
T ss_dssp HHHHHHHHHHH---SSCCHHHHHHHHHHHHHHHTT---CCEEEEEEEECTT---TCSEEEEEEEEETTEEEEECCC-CCC
T ss_pred HHhHHHHHhcc---CCchHHHHHHHHHHHHHHHcC---CCcEEEEEEEECC---CCeEEEEEEEEeCCceEEEeCC-CCC
Confidence 99999999865 789999999999999999995 77899998 4455 6899999999999999999997 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 023853 250 EYERAGLEKAKKELAGSIQKGVSF 273 (276)
Q Consensus 250 ~~E~~~l~~sa~~i~~~~~~~~~~ 273 (276)
++|+++|++|++.|++.++++.+.
T Consensus 285 ~~e~~~l~~s~~~l~~~~~~~~~~ 308 (309)
T 1hyh_A 285 TDEQEKLLQSRDYIQQRFDEIVDT 308 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999988764
No 37
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=100.00 E-value=2.2e-45 Score=335.19 Aligned_cols=243 Identities=28% Similarity=0.472 Sum_probs=222.0
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
..+..++|+ +++++||+||++.|.|+++|++|.|++.+|+++++++++.+.+++|+++++++|||++ ++++.+++
T Consensus 59 ~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~----~~~~~~~~ 133 (317)
T 2ewd_A 59 SKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD----VMVSHFQK 133 (317)
T ss_dssp CCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH----HHHHHHHH
T ss_pred cEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH----HHHHHHHH
Confidence 356677899 6999999999999999999999999999999999999999999999999999999999 88888889
Q ss_pred cCCCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC----------CCChhHHHHH
Q 023853 98 VGTYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC----------SLTPTEIDYL 166 (276)
Q Consensus 98 ~~~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~----------~~~~~~~~~i 166 (276)
.+++|++||+|+ |.+|+.|+++.+|+++|+++++++++|||+|| ++++|+||++++.+ .+++++++++
T Consensus 134 ~~~~~~~rviG~~t~ld~~r~~~~la~~lg~~~~~v~~~v~g~Hg-~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~ 212 (317)
T 2ewd_A 134 VSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGHG-DGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEI 212 (317)
T ss_dssp HHCCCGGGEEESCHHHHHHHHHHHHHHHHTSCGGGEECCEEBCSS-TTCEECGGGCEETTEEHHHHHHTTSSCHHHHHHH
T ss_pred hhCCCHHHEEeccCcHHHHHHHHHHHHHhCcChhhceEEEEecCC-CceeEEeeccccCCEEHHHHHhccCCCHHHHHHH
Confidence 999999999999 79999999999999999999999999999996 79999999986533 2567778888
Q ss_pred HHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCceEEEcc
Q 023853 167 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGIEEIYS 244 (276)
Q Consensus 167 ~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv~~i~~ 244 (276)
.++++.+++++++.. |+|++.|++|.++++++++|+++ ++.++|++ +.+|+|+ ++.|||+||++|++|++++++
T Consensus 213 ~~~~~~~~~ei~~~~-g~g~~~~~~a~a~~~~~~ai~~~---~~~~~~~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~ 288 (317)
T 2ewd_A 213 VCHTRIAWKEVADNL-KTGTAYFAPAAAAVKMAEAYLKD---KKAVVPCSAFCSNHYGVKGIYMGVPTIIGKNGVEDILE 288 (317)
T ss_dssp HHHHHHHHHHHHHHH-SSSCCCHHHHHHHHHHHHHHHTT---CCEEEEEEEEESSSTTCSSEEEEEEEEEETTEEEEECC
T ss_pred HHHHHhhHHHHHHhh-cCCchHHHHHHHHHHHHHHHHcC---CCeEEEEEEEecCccCCcceEEEeEEEEcCCeeEEecC
Confidence 888889999999864 67899999999999999999985 67899987 5678885 689999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 245 LGPLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 245 ~~~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
+ +|+++|+++|++|++.|++.+++..
T Consensus 289 ~-~l~~~e~~~l~~s~~~l~~~~~~~~ 314 (317)
T 2ewd_A 289 L-DLTPLEQKLLGESINEVNTISKVLD 314 (317)
T ss_dssp C-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 7 9999999999999999999998764
No 38
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=100.00 E-value=7.1e-41 Score=306.47 Aligned_cols=258 Identities=21% Similarity=0.293 Sum_probs=223.5
Q ss_pred ccccccCCcccccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 023853 6 AQNKFDVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPV 84 (276)
Q Consensus 6 ~~~~~d~~~~~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~ 84 (276)
++++.|++.+.+.++..+.++.++++|+|+||.+||.+++++++|.+++..|+.+++++++.+++++ |+++++++|||+
T Consensus 54 ~~dl~~~~~~~~~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 54 VMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp HHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hhhhhcccccccCCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 4567776667777888878888899999999999999999999999999999999999999999997 999999999999
Q ss_pred CCcHHHHHHHHHHcC-CCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeecCCCeeeecccCCCCCC-----C
Q 023853 85 NSTVPIAAEVFKKVG-TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGHAGVTILPLLSQVKPSC-----S 157 (276)
Q Consensus 85 d~~~~v~t~~~~~~~-~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~hgg~~~vp~~s~~~~~~-----~ 157 (276)
| .++++.++.+ ++|++++.|.|.+|+.|+++.+++++|+++..++ .+|||+|+ ++++|.|+++.+.+ .
T Consensus 134 ~----~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~-~~~~~~~~~~~~~g~~l~~~ 208 (327)
T 1y7t_A 134 N----TNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS-STMFPDLFHAEVDGRPALEL 208 (327)
T ss_dssp H----HHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS-TTCEEECSSCEETTEEGGGT
T ss_pred h----hhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC-CeEEEEeeeeeeCCeeHHHh
Confidence 9 6666667777 8999999999999999999999999999999999 57999997 68999999987543 2
Q ss_pred CChhH-HHHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCC--CCccEEEEeEE
Q 023853 158 LTPTE-IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTV--TELPFFASKVR 233 (276)
Q Consensus 158 ~~~~~-~~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y--~~~~~~s~Pv~ 233 (276)
++++. ++++.++++++|+++++.| | +++.+++|+++++++++|+++++ ++.++|++ +++|+| ++++|||+||+
T Consensus 209 ~~~~~~~~~~~~~v~~~g~~ii~~k-g-~~~~~~~a~a~~~~~~~i~~~~~-~~~~~~~~~~~~g~yg~~~~~~~~~P~~ 285 (327)
T 1y7t_A 209 VDMEWYEKVFIPTVAQRGAAIIQAR-G-ASSAASAANAAIEHIRDWALGTP-EGDWVSMAVPSQGEYGIPEGIVYSFPVT 285 (327)
T ss_dssp SCHHHHHHTHHHHHHHHHHHHHHHH-S-SCCHHHHHHHHHHHHHHHHTBCC-TTCCEEEEEECSSGGGCCTTSEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHHHHHHHcc-C-CCchHHHHHHHHHHHHHHHcCCC-CCeEEEEEEEecCccCCCCCeEEEEEEE
Confidence 33332 4789999999999999987 3 23344678899999999999642 46789998 567888 47899999999
Q ss_pred EcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 023853 234 LGRAGIEEIYS-LGPLNEYERAGLEKAKKELAGSIQKGVSF 273 (276)
Q Consensus 234 ig~~Gv~~i~~-~~~L~~~E~~~l~~sa~~i~~~~~~~~~~ 273 (276)
| ++|++++++ + +|+++|+++|++|++.|++.++.+.++
T Consensus 286 i-~~G~~~i~~~~-~l~~~e~~~l~~s~~~l~~~~~~~~~~ 324 (327)
T 1y7t_A 286 A-KDGAYRVVEGL-EINEFARKRMEITAQELLDEMEQVKAL 324 (327)
T ss_dssp E-ETTEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred E-cCCeEEecCCC-CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9 999999988 6 999999999999999999999887653
No 39
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=100.00 E-value=1.5e-39 Score=306.32 Aligned_cols=239 Identities=13% Similarity=0.080 Sum_probs=200.2
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHHhhCCCcEE
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDD--------------------LFNINAGIVKTLCEGIAKCCPKAIV 77 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~--------------------~~~~N~~i~~~i~~~i~~~~p~~~v 77 (276)
.+|+.++|+++|++|||+||+++|.++++|++|++ ++.+|+++++++++.|+++| +||+
T Consensus 59 ~~v~~t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~l 137 (417)
T 1up7_A 59 FKVLISDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATI 137 (417)
T ss_dssp SEEEECSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEE
T ss_pred eEEEEeCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEE
Confidence 45888899988999999999999999998888854 36899999999999999999 9999
Q ss_pred EEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCceeeEEe-----------ecCCCeee
Q 023853 78 NLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-----------GHAGVTIL 146 (276)
Q Consensus 78 ivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~~ViG-----------~hgg~~~v 146 (276)
|++|||+| ++|+++++.+ |++||||+|... .|+++++|+.+|+++++|+++|+| +|| ++++
T Consensus 138 in~TNPvd----i~t~a~~k~~--p~~rviG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG-~d~~ 209 (417)
T 1up7_A 138 VNFTNPSG----HITEFVRNYL--EYEKFIGLCNVP-INFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKG-EDVT 209 (417)
T ss_dssp EECSSSHH----HHHHHHHHTT--CCSSEEECCSHH-HHHHHHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETT-EECH
T ss_pred EEeCChHH----HHHHHHHHhC--CCCCEEEeCCCH-HHHHHHHHHHhCCCHHHCeEEEEeecceeeEEEeecCC-cEeh
Confidence 99999999 9999999986 788999996442 499999999999999999999999 995 8999
Q ss_pred ecccCC---CCCC----CC---------------------ChhHHHHH---------HHHHhcCcccee--------ecc
Q 023853 147 PLLSQV---KPSC----SL---------------------TPTEIDYL---------TDRIQNGGTEVV--------EAK 181 (276)
Q Consensus 147 p~~s~~---~~~~----~~---------------------~~~~~~~i---------~~~v~~~~~~ii--------~~k 181 (276)
|.||.. .+.+ .+ +++..+++ .+++++++++++ ++.
T Consensus 210 p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l~ 289 (417)
T 1up7_A 210 EKVFENLKLKLSNIPDEDFPTWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEELT 289 (417)
T ss_dssp HHHHHHHTTC---CCTTSCCHHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGGG
T ss_pred hhHHHHHHHhhCCCcCCchHHHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhhh
Confidence 999985 3211 12 12333444 466777788887 222
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEeeee-cCCC---CCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHH
Q 023853 182 TGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYV-ASTV---TELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLE 257 (276)
Q Consensus 182 ~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s~~-~~~y---~~~~~~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~ 257 (276)
+||++.| +.+++++++||+++ ++.++|+++. +|.| |+|+++++||++|++|++++... +|+++|+++++
T Consensus 290 -~kg~t~~--~~~a~~ii~AI~~d---~~~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~~-~L~~~e~~~l~ 362 (417)
T 1up7_A 290 -KRGGSMY--STAAAHLIRDLETD---EGKIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQG-KGDHFALSFIH 362 (417)
T ss_dssp -GSTTTTH--HHHHHHHHHHHHSS---SCEEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCCC-CCCHHHHHHHH
T ss_pred -hcCCcHH--HHHHHHHHHHHHcC---CCeEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeecC-CCCHHHHHHHH
Confidence 4567755 66999999999995 7889999854 6766 37899999999999999999987 89999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 023853 258 KAKKELAGSIQKGVS 272 (276)
Q Consensus 258 ~sa~~i~~~~~~~~~ 272 (276)
.++...+..++.+++
T Consensus 363 ~~~~~e~l~veA~~~ 377 (417)
T 1up7_A 363 AVKMYERLTIEAYLK 377 (417)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999988877653
No 40
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=2.3e-38 Score=300.95 Aligned_cols=240 Identities=15% Similarity=0.148 Sum_probs=197.1
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHHhhCCCcEE
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDL--------------------FNINAGIVKTLCEGIAKCCPKAIV 77 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~--------------------~~~N~~i~~~i~~~i~~~~p~~~v 77 (276)
.+|..++|+++|++|||+||+++|.++++|++|+++ +.+|+++++++++.|+++||+||+
T Consensus 69 ~~i~~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~i 148 (450)
T 1s6y_A 69 IEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWL 148 (450)
T ss_dssp CEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred cEEEEeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEE
Confidence 357788999889999999999999999999888755 899999999999999999999999
Q ss_pred EEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCceeeEEe-----------ecCCCeee
Q 023853 78 NLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-----------GHAGVTIL 146 (276)
Q Consensus 78 ivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~~ViG-----------~hgg~~~v 146 (276)
|++|||+| ++|+++++.+ |++||||+|... .|+++++|+.||+++++|+++|+| +|| ++.+
T Consensus 149 i~~tNPvd----ivT~a~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G-~d~~ 220 (450)
T 1s6y_A 149 INFTNPAG----MVTEAVLRYT--KQEKVVGLCNVP-IGMRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDG-VEVT 220 (450)
T ss_dssp EECSSSHH----HHHHHHHHHC--CCCCEEECCSHH-HHHHHHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETT-EECH
T ss_pred EEeCCcHH----HHHHHHHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCC-cCch
Confidence 99999999 9999999986 788999997553 499999999999999999999999 885 8999
Q ss_pred ecccCCCCC----C---------CC---------------------ChhH-------------HHHHHHHHhcCcccee-
Q 023853 147 PLLSQVKPS----C---------SL---------------------TPTE-------------IDYLTDRIQNGGTEVV- 178 (276)
Q Consensus 147 p~~s~~~~~----~---------~~---------------------~~~~-------------~~~i~~~v~~~~~~ii- 178 (276)
|.||..... + .+ +++. +.++.+++++++++++
T Consensus 221 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~ 300 (450)
T 1s6y_A 221 EKVIDLVAHPDRSGVTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYK 300 (450)
T ss_dssp HHHHHHHSCC------------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTT
T ss_pred HhHHHHHhhhccccccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHh
Confidence 999874221 0 11 1221 2245667788888888
Q ss_pred ----eccC----CCCchhHHHHHHHHHHHHHHHhccCCCCCeeEeeee-cCCC---CCccEEEEeEEEcCCceEEEccCC
Q 023853 179 ----EAKT----GAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYV-ASTV---TELPFFASKVRLGRAGIEEIYSLG 246 (276)
Q Consensus 179 ----~~k~----gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s~~-~~~y---~~~~~~s~Pv~ig~~Gv~~i~~~~ 246 (276)
+.|. +++++ ++|.+++++++||+++ ++.++++++. +|.| |+|+++++||+||++|+++++..
T Consensus 301 ~~~~~~k~~~~~~~~~~--~~~~~a~~ii~AI~~d---~~~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~- 374 (450)
T 1s6y_A 301 DPNLAIKPPQLEKRGGA--YYSDAACSLISSIYND---KRDIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVG- 374 (450)
T ss_dssp CC-----------CCSC--CHHHHHHHHHHHHHHT---CCCEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-
T ss_pred hhccccccchhhcccch--HHHHHHHHHHHHHHcC---CCeEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecC-
Confidence 4331 13333 5567999999999995 7889999855 6766 47899999999999999999997
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHh
Q 023853 247 PLNEYERAGLEKAKKELAGSIQKGV 271 (276)
Q Consensus 247 ~L~~~E~~~l~~sa~~i~~~~~~~~ 271 (276)
+|+++|+++++.++..-+-.++.++
T Consensus 375 ~L~~~e~~l~~~~~~~e~l~veAa~ 399 (450)
T 1s6y_A 375 DLPVAVRGLVQQIKSFERVAAEAAV 399 (450)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999877665555543
No 41
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=100.00 E-value=5.3e-37 Score=279.04 Aligned_cols=238 Identities=22% Similarity=0.384 Sum_probs=212.1
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHcC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVG 99 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~~ 99 (276)
+..++|++ ++++||+||++.+.++++|++|.+++.+|+++++++++.+.+++|++++++++||++ .+++++++.+
T Consensus 64 v~~~~~~~-~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~----~~~~~~~~~~ 138 (319)
T 1lld_A 64 IDGSDDPE-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IATHVAQKLT 138 (319)
T ss_dssp EEEESCGG-GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH----HHHHHHHHHH
T ss_pred EEeCCCHH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH----HHHHHHHHhc
Confidence 44555775 899999999999999999999999999999999999999999999999999999999 8888888888
Q ss_pred CCCCCCEEEE-eechHHHHHHHHHHHhCCCCCCceeeEEeecCCCeeeecccCCCCCC-----------C--CChhHHHH
Q 023853 100 TYDPKRLLGV-TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSC-----------S--LTPTEIDY 165 (276)
Q Consensus 100 ~~~~~rviG~-t~lds~R~~~~la~~l~v~~~~v~~~ViG~hgg~~~vp~~s~~~~~~-----------~--~~~~~~~~ 165 (276)
++|++||+|. |.+|+.|++..++++++++++++++++||+|| ++++|+||++.++. . .+++.+++
T Consensus 139 ~~~~~~vig~~~~l~~~r~~~~~a~~~~v~~~~v~~~~~G~~g-~~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~ 217 (319)
T 1lld_A 139 GLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGEHG-DSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREE 217 (319)
T ss_dssp TCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEECCEEBSSS-TTCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHH
T ss_pred CCCHHHEeeccccHhHHHHHHHHHHHhCCCHHHeEEEEEeCCC-CceeeeeecceECCccHHHHHhccccccCCHHHHHH
Confidence 9999999999 99999999999999999999999999999996 79999999976532 1 23344788
Q ss_pred HHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEee-eecCCCC-CccEEEEeEEEcCCceEEEc
Q 023853 166 LTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECA-YVASTVT-ELPFFASKVRLGRAGIEEIY 243 (276)
Q Consensus 166 i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s-~~~~~y~-~~~~~s~Pv~ig~~Gv~~i~ 243 (276)
+.+++++.++++++.+ |++.+++|.+.++++++|+++ ++.++++| +++|.|. .+.++|+||.++++|+++++
T Consensus 218 ~~~~~~~e~~~v~~~~---G~~~~~~a~~~~sm~~di~~~---~~~ei~~s~~~~G~~~~~~~~~gvp~~~~~~Gv~~i~ 291 (319)
T 1lld_A 218 IHQEVKNAAYKIINGK---GATNYAIGMSGVDIIEAVLHD---TNRILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTI 291 (319)
T ss_dssp HHHHHHHHHHHHHTSC---CSCCHHHHHHHHHHHHHHHTT---CCEEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCS
T ss_pred HHHHHHHhhHhhhhCC---CCchHHHHHHHHHHHHHHHcC---CCcEEEEEEEecCcCCccceEEEEEEEEeCCeeEEEc
Confidence 8899999999998854 678899999999999999985 67888987 6688774 57899999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 244 SLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 244 ~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
++ +|+++|+++|++|++.|++.+++.
T Consensus 292 ~~-~l~~~e~~~l~~s~~~l~~~~~~~ 317 (319)
T 1lld_A 292 NT-PVSDKELAALKRSAETLKETAAQF 317 (319)
T ss_dssp CC-CCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC-CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 97 999999999999999999998753
No 42
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=100.00 E-value=1.5e-36 Score=289.72 Aligned_cols=241 Identities=17% Similarity=0.182 Sum_probs=188.2
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHHhhCCCcEE
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDL--------------------FNINAGIVKTLCEGIAKCCPKAIV 77 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~--------------------~~~N~~i~~~i~~~i~~~~p~~~v 77 (276)
.+|..++|+++|++|||+||+++|.++++|++|+++ +.+|+++++++++.|+++||+||+
T Consensus 88 ~~I~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~i 167 (472)
T 1u8x_X 88 IEFAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWM 167 (472)
T ss_dssp SEEEEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CEEEEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEE
Confidence 357788999889999999999999998888888554 899999999999999999999999
Q ss_pred EEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCC-CCceeeEEe-----------e-cCCCe
Q 023853 78 NLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDP-REVDVPVVG-----------G-HAGVT 144 (276)
Q Consensus 78 ivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~-~~v~~~ViG-----------~-hgg~~ 144 (276)
|++|||+| ++|+++++.+ |++||||+|... .|+++++|+.||+++ ++|+++|+| + || ++
T Consensus 168 i~~TNPvd----i~T~~~~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~hG-~d 239 (472)
T 1u8x_X 168 LNYSNPAA----IVAEATRRLR--PNSKILNICDMP-VGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEG-ND 239 (472)
T ss_dssp EECCSCHH----HHHHHHHHHS--TTCCEEECCSHH-HHHHHHHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETTC-CB
T ss_pred EEeCCcHH----HHHHHHHHhC--CCCCEEEeCCcH-HHHHHHHHHHhCcCchhceeEEEeccchhhheeeeEeCCC-CE
Confidence 99999999 9999999986 888999997543 399999999999998 999999999 8 95 79
Q ss_pred eeecccCCCC-C------------CCCChhH--------------------H----HHHHH----------HHhc-Cccc
Q 023853 145 ILPLLSQVKP-S------------CSLTPTE--------------------I----DYLTD----------RIQN-GGTE 176 (276)
Q Consensus 145 ~vp~~s~~~~-~------------~~~~~~~--------------------~----~~i~~----------~v~~-~~~~ 176 (276)
.+|.||...+ . ..+..+- | +++.+ ++++ .+.+
T Consensus 240 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~ 319 (472)
T 1u8x_X 240 LMPKLKEHVSQYGYIPKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAF 319 (472)
T ss_dssp CHHHHHHHHHHHSSCCCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTT
T ss_pred ehHhHHHHHHhcCCCccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9999987321 0 0011000 1 11111 1222 2223
Q ss_pred eeeccC-C--CC---chhH---HHHHHHHHHHHHHHhccCCCCCeeEeeee-cCCC---CCccEEEEeEEEcCCceEEEc
Q 023853 177 VVEAKT-G--AG---SATL---SMAYAAAKFADACLRGLRGDAGVIECAYV-ASTV---TELPFFASKVRLGRAGIEEIY 243 (276)
Q Consensus 177 ii~~k~-g--kg---~~~~---s~A~a~~~li~ai~~~~~~~~~~~~~s~~-~~~y---~~~~~~s~Pv~ig~~Gv~~i~ 243 (276)
+++.-. + ++ ++.| ++|.+++++++||+++ ++.++++++. +|.| |+|+++++||+||++|++++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ii~AI~~d---~~~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~ 396 (472)
T 1u8x_X 320 IFSQCDMITREQSSENSEIKIDDHASYIVDLARAIAYN---TGERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPIT 396 (472)
T ss_dssp TTTTHHHHHHHTSCCSCSSCCCTTTHHHHHHHHHHHHT---CCEEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECC
T ss_pred HHHHHHhhhhcCCcccccccccHHHHHHHHHHHHHhcC---CCeEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEee
Confidence 322100 1 23 3344 8999999999999995 7889999854 6766 378999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 244 SLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 244 ~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
.. +|+++|+++++.-...-+-.++.+
T Consensus 397 ~~-~Lp~~~~~l~~~~~~~e~l~veAa 422 (472)
T 1u8x_X 397 VG-TIPQFQKGLMEQQVSVEKLTVEAW 422 (472)
T ss_dssp CB-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 87 899999999988766555444443
No 43
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=99.95 E-value=4.5e-28 Score=229.58 Aligned_cols=232 Identities=19% Similarity=0.232 Sum_probs=169.1
Q ss_pred cceecCCCHHhhcCCCcEEEEcCC------------CCCCCCCCHH----------HHHHHHHHHHHHHHHHHHhhCCCc
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAG------------VPRKPGMTRD----------DLFNINAGIVKTLCEGIAKCCPKA 75 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag------------~~~k~g~~r~----------~~~~~N~~i~~~i~~~i~~~~p~~ 75 (276)
..|+.|+|+++|++|||+||++.+ .|+|+|+.|. ....+|+++++++++.|+++||+|
T Consensus 61 ~~I~~TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a 140 (450)
T 3fef_A 61 WRYEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPES 140 (450)
T ss_dssp EEEEEESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CeEEEECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCe
Confidence 358899999999999999999885 5889998665 455699999999999999999999
Q ss_pred EEEEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHh----C---CCCCCceeeEEe-ecC------
Q 023853 76 IVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVL----G---LDPREVDVPVVG-GHA------ 141 (276)
Q Consensus 76 ~vivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l----~---v~~~~v~~~ViG-~hg------ 141 (276)
|+|++|||+| ++|+++++. +|++||||+|... .++++.+|+.| | +++++|+..+.| ||-
T Consensus 141 ~~i~~tNPvd----i~t~~~~k~--~p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~~~GlNH~~w~~~~ 213 (450)
T 3fef_A 141 WVINYTNPMS----VCTRVLYKV--FPGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKA 213 (450)
T ss_dssp EEEECCSSHH----HHHHHHHHH--CTTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEEEEEETTEEEEEEE
T ss_pred EEEEecCchH----HHHHHHHHH--CCCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEEEeeecCeEeEEEE
Confidence 9999999999 999999987 7899999998764 69999999999 5 779999999999 885
Q ss_pred ---CCeeeecc-------------------cCCC------------------CC-------CCCC---------------
Q 023853 142 ---GVTILPLL-------------------SQVK------------------PS-------CSLT--------------- 159 (276)
Q Consensus 142 ---g~~~vp~~-------------------s~~~------------------~~-------~~~~--------------- 159 (276)
|.+..|.. .... |. .++.
T Consensus 214 ~~~G~d~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~ 293 (450)
T 3fef_A 214 SYRHIDLLPIFREFSAHYGESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLT 293 (450)
T ss_dssp EETTEEHHHHHHHHHHHHTTTCCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCC
T ss_pred EECCEEChHHHHHHHHhhcccccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhccccc
Confidence 22222310 0000 00 0000
Q ss_pred hhHH---------HHHHHHHhcCccceeeccCCCCchhHHHHHHHHHHHHHHHhccCCCCCeeEeeee-cCCC---CCcc
Q 023853 160 PTEI---------DYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYV-ASTV---TELP 226 (276)
Q Consensus 160 ~~~~---------~~i~~~v~~~~~~ii~~k~gkg~~~~s~A~a~~~li~ai~~~~~~~~~~~~~s~~-~~~y---~~~~ 226 (276)
...| +++.+... +..-++.+ ++ +.+++++++||+++ ++.++++++. +|.| ++|+
T Consensus 294 ~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~---~~-----~e~~~~ii~aI~~d---~~~~~~vnv~n~G~i~~lp~d~ 360 (450)
T 3fef_A 294 PISFRKQDRAEKRQETERLIV--QQRGVAEK---AS-----GEEGVNIIAALLGL---GELVTNVNMPNQGQVLNLPIQA 360 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH--TTCCCCCS---CC-----SCCHHHHHHHHTTS---CCEEEEEEEECSSSSTTSCTTS
T ss_pred chhhHHHHHHHHHHHHHHHhc--CCcCcCcC---cc-----HHHHHHHHHHHHcC---CCeEEEEEeecCcEecCCCCCe
Confidence 0000 11111000 00111111 11 22478999999995 7889999865 5666 4789
Q ss_pred EEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 227 FFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 227 ~~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
++++||++|++|+.++... +|++.+++++......-+-.++.+
T Consensus 361 ~vevP~~v~~~Gi~pi~~g-~Lp~~~~~l~~~~~~~e~l~veAa 403 (450)
T 3fef_A 361 IVETNAFITRNRVQPILSG-ALPKGVEMLAARHISNQEAVADAG 403 (450)
T ss_dssp EEEEEEEEETTEEEEBCCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcCCCceecccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998775 899999998877665544444443
No 44
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=99.93 E-value=3.3e-25 Score=211.53 Aligned_cols=239 Identities=20% Similarity=0.179 Sum_probs=165.2
Q ss_pred ccceecCCCHHhhcCCCcEEEEcCCC------------CCCCCCCH--HH------------HHHHHHHHHHHHHHHHHh
Q 023853 17 VRGFLGQQQLEDALTGMDIVIIPAGV------------PRKPGMTR--DD------------LFNINAGIVKTLCEGIAK 70 (276)
Q Consensus 17 ~~~i~~~~d~~~al~daDiVii~ag~------------~~k~g~~r--~~------------~~~~N~~i~~~i~~~i~~ 70 (276)
-..|+.++|+++|++|||+||+++|. |+|+|+.| .+ ++.+|+++++++++.|++
T Consensus 62 ~~~I~~ttD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~ 141 (480)
T 1obb_A 62 DLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEK 141 (480)
T ss_dssp CCEEEEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCHHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHH
Confidence 34688899998899999999999986 55667655 44 488999999999999999
Q ss_pred hCCCcEEEEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEe-echHHHHHHHHHHHhCCCCCCceeeEEe-ecC-------
Q 023853 71 CCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-MLDVVRANTFVAEVLGLDPREVDVPVVG-GHA------- 141 (276)
Q Consensus 71 ~~p~~~vivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t-~lds~R~~~~la~~l~v~~~~v~~~ViG-~hg------- 141 (276)
+||+||+|++|||+| ++|+++++ +|++||||+| .+| ++++++ +.+|+++++|+++|+| ||.
T Consensus 142 ~~P~A~ii~~TNPvd----i~t~~~~k---~p~~rviG~c~~~~--~~~~~l-~~lgv~~~~v~~~v~GlNH~~w~~~~~ 211 (480)
T 1obb_A 142 LSPKAWYLQAANPIF----EGTTLVTR---TVPIKAVGFCHGHY--GVMEIV-EKLGLEEEKVDWQVAGVNHGIWLNRFR 211 (480)
T ss_dssp HCTTCEEEECSSCHH----HHHHHHHH---HSCSEEEEECSGGG--HHHHHH-HHTTCCGGGEEEEEEEETTEEEEEEEE
T ss_pred HCCCeEEEEeCCcHH----HHHHHHHH---CCCCcEEecCCCHH--HHHHHH-HHhCCCHHHceEEEEeecchhhhhhee
Confidence 999999999999999 99999988 7899999996 555 478999 9999999999999999 775
Q ss_pred --CCeeeec-----------------ccC--C------------CCC-------CCC------------------Ch---
Q 023853 142 --GVTILPL-----------------LSQ--V------------KPS-------CSL------------------TP--- 160 (276)
Q Consensus 142 --g~~~vp~-----------------~s~--~------------~~~-------~~~------------------~~--- 160 (276)
|.+.+|. |+. . .|. ... .+
T Consensus 212 ~~G~D~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~ 291 (480)
T 1obb_A 212 YNGGNAYPLLDKWIEEKSKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEI 291 (480)
T ss_dssp ETTEECHHHHHHHHHHTGGGCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHH
T ss_pred eCCeEcHHHHHHHHHccCccccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhccccccc
Confidence 2222110 221 0 011 111 01
Q ss_pred --hH----HHHHHHHHhcCccceeeccC--C------CCchhHH----------------HHHHHHHHHHHHHhccCCCC
Q 023853 161 --TE----IDYLTDRIQNGGTEVVEAKT--G------AGSATLS----------------MAYAAAKFADACLRGLRGDA 210 (276)
Q Consensus 161 --~~----~~~i~~~v~~~~~~ii~~k~--g------kg~~~~s----------------~A~a~~~li~ai~~~~~~~~ 210 (276)
.+ +.+......+.-+++++... . .+.++|+ .+-.++.+++||+++ ++
T Consensus 292 ~~~~~~~~~~e~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ge~a~~ii~ai~~~---~~ 368 (480)
T 1obb_A 292 GWKWYQDTLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFIDALLND---NK 368 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCSCSHHHHHHHHHHC---CC
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHhC---CC
Confidence 01 11111111111111111100 0 0011111 113678999999995 67
Q ss_pred CeeEeeeecCC----CCCccEEEEeEEEcCCceEEEccCCC-CCHHHHHH-HHHHHHHHHHHHHH
Q 023853 211 GVIECAYVAST----VTELPFFASKVRLGRAGIEEIYSLGP-LNEYERAG-LEKAKKELAGSIQK 269 (276)
Q Consensus 211 ~~~~~s~~~~~----y~~~~~~s~Pv~ig~~Gv~~i~~~~~-L~~~E~~~-l~~sa~~i~~~~~~ 269 (276)
.++.+++.+.+ .|++.++.+||+++++|+.++.-. + |++...++ +..-...-+-.++.
T Consensus 369 ~~~~vnv~N~G~I~~lp~d~vVEvp~~v~~~G~~p~~~g-~~lP~~~~~l~~~~~~~~e~l~veA 432 (480)
T 1obb_A 369 ARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIE-PPLPDRVVKYYLRPRIMRMEMALEA 432 (480)
T ss_dssp EEEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCS-SCCCHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEEeeCCceeCCCCCCeEEEEEEEEcCCCCEeeccC-CCCCHHHHhHHHHHHHHHHHHHHHH
Confidence 78888877655 267899999999999999997654 8 99998888 76655544444443
No 45
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=99.90 E-value=2e-23 Score=199.72 Aligned_cols=114 Identities=27% Similarity=0.325 Sum_probs=97.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCC-------------------CCCCCCCHHHHH---------------HHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGV-------------------PRKPGMTRDDLF---------------NINAGIVKTL 64 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~-------------------~~k~g~~r~~~~---------------~~N~~i~~~i 64 (276)
+|+.|+|+++|++|||+||+++|. |+|+|++|..+. .+|++++.++
T Consensus 63 ~i~~t~d~~eAl~gAD~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i 142 (477)
T 3u95_A 63 KVVKTESLDEAIEGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEI 142 (477)
T ss_dssp EEEEESCHHHHHTTCSEEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHH
T ss_pred EEEEeCCHHHHhCCCCEEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHH
Confidence 588999999999999999999874 347787776653 3699999999
Q ss_pred HHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCceeeEEe-ecC
Q 023853 65 CEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVG-GHA 141 (276)
Q Consensus 65 ~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~~~ViG-~hg 141 (276)
++.|+++||+||+|++|||++ ++|+++++.++ .|++|+|.-.. ....+++.||+++++|+..+.| ||-
T Consensus 143 ~~~i~~~~P~A~~in~tNP~~----i~t~a~~~~~~---~k~vGlC~~~~--~~~~~~~~Lg~~~~~v~~~~~GlNH~ 211 (477)
T 3u95_A 143 AEKMKKMAPKAYLMQTANPVF----EITQAVRRWTG---ANIIGFCHGVA--GVYEVFERLGLDPEEVDWQVAGVNHG 211 (477)
T ss_dssp HHHHHHHCTTCEEEECSSCHH----HHHHHHHHHHC---CCEEEECCGGG--HHHHHHHHTTCCGGGEEEEEEEETTE
T ss_pred HHHHHhhCCCeEEEEecChHH----HHHHHHHHhCC---CCeEEECCCHH--HHHHHHHHhCCCHHHcEEEEeecCCC
Confidence 999999999999999999999 99999999776 48999996433 3345778899999999999999 663
No 46
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.49 E-value=0.29 Score=46.20 Aligned_cols=67 Identities=15% Similarity=0.226 Sum_probs=43.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe--cCCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI--SNPVNS 86 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivv--tNP~d~ 86 (276)
.+..++|+++++++||+||++.+.|.+.+.++.+ -..+...+++.++.|.++.+.+.+|+. |+|...
T Consensus 73 ~l~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt 141 (481)
T 2o3j_A 73 NLFFSSDIPKAIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKA 141 (481)
T ss_dssp TEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred CEEEECCHHHHhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCH
Confidence 3677889988999999999998877654332222 112234455666677777654544444 788874
No 47
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=87.06 E-value=1.4 Score=38.22 Aligned_cols=72 Identities=14% Similarity=0.223 Sum_probs=42.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
.+..++|+++++++||+||.+... +....+++...+.++. |+++++..|.... ++.....
T Consensus 72 ~i~~~~~~~~~~~~aDlVi~av~~--------------~~~~~~~v~~~l~~~~~~~~il~s~tS~~~-----~~~la~~ 132 (283)
T 4e12_A 72 GIRYSDDLAQAVKDADLVIEAVPE--------------SLDLKRDIYTKLGELAPAKTIFATNSSTLL-----PSDLVGY 132 (283)
T ss_dssp HCEEESCHHHHTTTCSEEEECCCS--------------CHHHHHHHHHHHHHHSCTTCEEEECCSSSC-----HHHHHHH
T ss_pred CeEEeCCHHHHhccCCEEEEeccC--------------cHHHHHHHHHHHHhhCCCCcEEEECCCCCC-----HHHHHhh
Confidence 456788999899999999998632 2234445555666666 4555544444333 2222222
Q ss_pred cCCCCCCCEEEEee
Q 023853 98 VGTYDPKRLLGVTM 111 (276)
Q Consensus 98 ~~~~~~~rviG~t~ 111 (276)
. . .+.+++|+-.
T Consensus 133 ~-~-~~~~~ig~h~ 144 (283)
T 4e12_A 133 T-G-RGDKFLALHF 144 (283)
T ss_dssp H-S-CGGGEEEEEE
T ss_pred c-C-CCcceEEEcc
Confidence 2 1 2457777743
No 48
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.17 E-value=0.74 Score=41.18 Aligned_cols=74 Identities=11% Similarity=0.088 Sum_probs=49.7
Q ss_pred cccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHH
Q 023853 16 AVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVF 95 (276)
Q Consensus 16 ~~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~ 95 (276)
.+..++.++|++++++|||+||=+. -.|.++=+++-.++.++++..- |+.||-... .++...
T Consensus 71 ~l~~i~~~~~l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~a-IlaSNTSsl---~is~ia 132 (319)
T 3ado_A 71 QLSLISSCTNLAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRV-VLSSSSSCL---LPSKLF 132 (319)
T ss_dssp HHHTEEEECCHHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSS-EEEECCSSC---CHHHHH
T ss_pred HHhhcccccchHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcc-eeehhhhhc---cchhhh
Confidence 3556888999999999999987543 2356666778888888985432 367777664 234433
Q ss_pred HHcCCCCCCCEEEE
Q 023853 96 KKVGTYDPKRLLGV 109 (276)
Q Consensus 96 ~~~~~~~~~rviG~ 109 (276)
..+. .|+|++|+
T Consensus 133 -~~~~-~p~r~ig~ 144 (319)
T 3ado_A 133 -TGLA-HVKQCIVA 144 (319)
T ss_dssp -TTCT-TGGGEEEE
T ss_pred -hhcc-CCCcEEEe
Confidence 3333 36788886
No 49
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=85.75 E-value=1.7 Score=37.60 Aligned_cols=111 Identities=17% Similarity=0.164 Sum_probs=65.1
Q ss_pred CCHHhhcCCCcEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHH----HHHH
Q 023853 24 QQLEDALTGMDIVIIPAGVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAE----VFKK 97 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~----~~~~ 97 (276)
.++.++++++|+||-.++.+. .......+.+..|+.-...+.+.+.+.+.. .+|.+|.-. +... .+..
T Consensus 55 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~-----vyg~~~~~~~~E 128 (313)
T 3ehe_A 55 DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVFTSTST-----VYGEAKVIPTPE 128 (313)
T ss_dssp SCCHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEECCGG-----GGCSCSSSSBCT
T ss_pred HHHHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCchH-----HhCcCCCCCCCC
Confidence 467778999999999988643 223457788899999999999999888643 455554210 0000 0000
Q ss_pred cCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeec
Q 023853 98 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 140 (276)
Q Consensus 98 ~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~h 140 (276)
....++....|.+.....++-..+++..|++..-++ +.|+|..
T Consensus 129 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~ 172 (313)
T 3ehe_A 129 DYPTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRR 172 (313)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcC
Confidence 011112222222222334455556677787776677 6788854
No 50
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.47 E-value=0.59 Score=42.94 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=38.1
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-ecCCCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNL-ISNPVN 85 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~viv-vtNP~d 85 (276)
+..++|+++++++||+||++...+...+..+.+ ...++++++.+.+..++.+|+. .|||.+
T Consensus 61 l~~t~~~~~~~~~aDvviiavpt~~~~~~~~~d-----l~~v~~v~~~i~~l~~~~iVV~~ST~~~g 122 (402)
T 1dlj_A 61 IKATLDSKAAYKEAELVIIATPTNYNSRINYFD-----TQHVETVIKEVLSVNSHATLIIKSTIPIG 122 (402)
T ss_dssp EEEESCHHHHHHHCSEEEECCCCCEETTTTEEC-----CHHHHHHHHHHHHHCSSCEEEECSCCCTT
T ss_pred EEEeCCHHHHhcCCCEEEEecCCCcccCCCCcc-----HHHHHHHHHHHHhhCCCCEEEEeCCCCcc
Confidence 466788888999999999987665322222222 1233334444444456666665 699998
No 51
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.30 E-value=1.4 Score=39.32 Aligned_cols=74 Identities=8% Similarity=0.038 Sum_probs=44.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
.++.++|+++++++||+||.+... +..+.+++...+.++. |+++++..|.-.. ++.+ ..
T Consensus 74 ~i~~~~~~~eav~~aDlVieavpe--------------~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~-----~~~l-a~ 133 (319)
T 2dpo_A 74 LISSCTNLAEAVEGVVHIQECVPE--------------NLDLKRKIFAQLDSIVDDRVVLSSSSSCLL-----PSKL-FT 133 (319)
T ss_dssp TEEEECCHHHHTTTEEEEEECCCS--------------CHHHHHHHHHHHHTTCCSSSEEEECCSSCC-----HHHH-HT
T ss_pred ceEEeCCHHHHHhcCCEEEEeccC--------------CHHHHHHHHHHHHhhCCCCeEEEEeCCChH-----HHHH-HH
Confidence 467889999999999999997621 2344455556677776 4555544443222 2332 22
Q ss_pred cCCCCCCCEEEEeech
Q 023853 98 VGTYDPKRLLGVTMLD 113 (276)
Q Consensus 98 ~~~~~~~rviG~t~ld 113 (276)
... .+.|++|+-.++
T Consensus 134 ~~~-~~~r~ig~Hp~~ 148 (319)
T 2dpo_A 134 GLA-HVKQCIVAHPVN 148 (319)
T ss_dssp TCT-TGGGEEEEEECS
T ss_pred hcC-CCCCeEEeecCC
Confidence 222 246788885443
No 52
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.33 E-value=1.9 Score=37.60 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=33.3
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d 85 (276)
.+..++|+++++++||+||++... +..+.+++...+.++. |+.+++..|+...
T Consensus 87 ~i~~~~~~~~~~~~aD~Vi~avp~--------------~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~ 140 (302)
T 1f0y_A 87 TIATSTDAASVVHSTDLVVEAIVE--------------NLKVKNELFKRLDKFAAEHTIFASNTSSLQ 140 (302)
T ss_dssp TEEEESCHHHHTTSCSEEEECCCS--------------CHHHHHHHHHHHTTTSCTTCEEEECCSSSC
T ss_pred ceEEecCHHHhhcCCCEEEEcCcC--------------cHHHHHHHHHHHHhhCCCCeEEEECCCCCC
Confidence 466788998899999999998621 1233345556666665 4555543444333
No 53
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=82.85 E-value=1.2 Score=41.72 Aligned_cols=61 Identities=20% Similarity=0.287 Sum_probs=40.7
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc-EEEEec-CCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKA-IVNLIS-NPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~-~vivvt-NP~d 85 (276)
.+..++|+++++++||+||++.+.|.+++. ..+...++++++.+.++-+.+ +|+..| -|..
T Consensus 65 ~l~~t~d~~ea~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg 127 (450)
T 3gg2_A 65 RLRFGTEIEQAVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVG 127 (450)
T ss_dssp SEEEESCHHHHGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTT
T ss_pred cEEEECCHHHHHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCc
Confidence 367789999999999999999877754332 234455666667777766444 444443 3544
No 54
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.57 E-value=2.1 Score=40.24 Aligned_cols=49 Identities=12% Similarity=0.199 Sum_probs=33.3
Q ss_pred ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe
Q 023853 17 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI 80 (276)
Q Consensus 17 ~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivv 80 (276)
+..++.++|++ ++++||+||.+.- .+..+.+++...+.++. |+++++..
T Consensus 116 ~~~i~~t~dl~-al~~aDlVIeAVp--------------e~~~vk~~v~~~l~~~~~~~aIlasn 165 (460)
T 3k6j_A 116 NANLKITSDFH-KLSNCDLIVESVI--------------EDMKLKKELFANLENICKSTCIFGTN 165 (460)
T ss_dssp HTTEEEESCGG-GCTTCSEEEECCC--------------SCHHHHHHHHHHHHTTSCTTCEEEEC
T ss_pred hcceEEeCCHH-HHccCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCCEEEec
Confidence 34577888996 8999999999753 13445556666777776 45555433
No 55
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=80.76 E-value=1.3 Score=38.23 Aligned_cols=56 Identities=16% Similarity=0.132 Sum_probs=40.7
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
..+++++++++|+||.+++..... +..+.+..|+...+.+.+.+.+.+.+- +|.+|
T Consensus 53 ~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r-~v~~S 108 (311)
T 3m2p_A 53 LEDLINQLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNISN-IVYAS 108 (311)
T ss_dssp HHHHHHHTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCE-EEEEE
T ss_pred HHHHHHhhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence 345677899999999998865432 445567789999999999998876543 44443
No 56
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.09 E-value=1.8 Score=39.95 Aligned_cols=72 Identities=17% Similarity=0.306 Sum_probs=41.5
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CC---CcEEEEe-cCCCCCcHHHHHHH
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CP---KAIVNLI-SNPVNSTVPIAAEV 94 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p---~~~vivv-tNP~d~~~~v~t~~ 94 (276)
+..++|+++++++||+||++...|...... .+...+++.++.+.++ .+ +.+|+.. |+|...+.-.+...
T Consensus 64 l~~t~~~~~~~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~ 137 (436)
T 1mv8_A 64 LSGTTDFKKAVLDSDVSFICVGTPSKKNGD------LDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPL 137 (436)
T ss_dssp EEEESCHHHHHHTCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHH
T ss_pred eEEeCCHHHHhccCCEEEEEcCCCcccCCC------cchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHH
Confidence 677889988999999999998766532211 1222233333444433 24 5566555 78887422234444
Q ss_pred HHH
Q 023853 95 FKK 97 (276)
Q Consensus 95 ~~~ 97 (276)
+.+
T Consensus 138 l~~ 140 (436)
T 1mv8_A 138 IED 140 (436)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 57
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=77.36 E-value=2.6 Score=38.69 Aligned_cols=49 Identities=10% Similarity=0.235 Sum_probs=36.7
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISN 82 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtN 82 (276)
..+..++|+++++++||+||++.- .+.++++.++++.+- ++..+|.++.
T Consensus 103 ~~i~~t~dl~~al~~ad~ii~avP----------------s~~~r~~l~~l~~~~~~~~~iv~~~K 152 (391)
T 4fgw_A 103 DNLVANPDLIDSVKDVDIIVFNIP----------------HQFLPRICSQLKGHVDSHVRAISCLK 152 (391)
T ss_dssp SSEEEESCHHHHHTTCSEEEECSC----------------GGGHHHHHHHHTTTSCTTCEEEECCC
T ss_pred CCcEEeCCHHHHHhcCCEEEEECC----------------hhhhHHHHHHhccccCCCceeEEecc
Confidence 467889999999999999999642 345677788888776 4556666653
No 58
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=74.89 E-value=5.1 Score=36.01 Aligned_cols=64 Identities=11% Similarity=0.083 Sum_probs=43.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
.+..++|+++++++||+||++.- ...++++.+.+..+- ++.+++.++|-.+.-+..+++.+.+
T Consensus 86 ~i~~t~d~~ea~~~aDvVilaVp----------------~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~ 149 (356)
T 3k96_A 86 TLKAYCDLKASLEGVTDILIVVP----------------SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT 149 (356)
T ss_dssp TEEEESCHHHHHTTCCEEEECCC----------------HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH
T ss_pred CeEEECCHHHHHhcCCEEEECCC----------------HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH
Confidence 46778899999999999999752 124667777787775 5678888888665211233444444
Q ss_pred c
Q 023853 98 V 98 (276)
Q Consensus 98 ~ 98 (276)
.
T Consensus 150 ~ 150 (356)
T 3k96_A 150 E 150 (356)
T ss_dssp H
T ss_pred H
Confidence 3
No 59
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=74.17 E-value=5.6 Score=34.65 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=42.2
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||-+++..........+.+..|+.-...+.+.+.+.+.. .+|.+|
T Consensus 70 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~V~~S 125 (347)
T 4id9_A 70 ALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVR-RFVFAS 125 (347)
T ss_dssp HHHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred HHHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEC
Confidence 45678899999999998654434445788899999999999999887644 444444
No 60
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=73.77 E-value=3.8 Score=38.57 Aligned_cols=64 Identities=11% Similarity=0.079 Sum_probs=39.3
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEEe-cCCCCC
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-AIVNLI-SNPVNS 86 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-~~vivv-tNP~d~ 86 (276)
..+..|+|. +++++||+||++.+.|..++.++ ..+...++..++.|.++.+. .+|+.- |-|..+
T Consensus 88 g~l~~ttd~-ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgt 153 (478)
T 3g79_A 88 GKFECTPDF-SRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLESTITPGT 153 (478)
T ss_dssp TCEEEESCG-GGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTT
T ss_pred CCeEEeCcH-HHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHH
Confidence 346778885 69999999999988776443321 12344455556666666544 444444 455554
No 61
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=72.21 E-value=8.3 Score=32.87 Aligned_cols=102 Identities=21% Similarity=0.183 Sum_probs=61.5
Q ss_pred HHhhcCCCcEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC----------CCCCcHHHHHH
Q 023853 26 LEDALTGMDIVIIPAGVPR--KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN----------PVNSTVPIAAE 93 (276)
Q Consensus 26 ~~~al~daDiVii~ag~~~--k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN----------P~d~~~~v~t~ 93 (276)
+++++++ |+||-+++.+. .........+..|+.-...+.+.+.+.+.. .+|.+|. |.+
T Consensus 57 ~~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~vyg~~~~~~~~-------- 126 (312)
T 3ko8_A 57 WGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVR-TVVFASSSTVYGDADVIPTP-------- 126 (312)
T ss_dssp TTTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCSSSSBC--------
T ss_pred HHhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeCcHHHhCCCCCCCCC--------
Confidence 5556777 99999998643 223456778889999999999999888644 4444432 111
Q ss_pred HHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeec
Q 023853 94 VFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 140 (276)
Q Consensus 94 ~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~h 140 (276)
.....++....|.+.....++-..+++..|++..-++ +.|+|..
T Consensus 127 ---e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~ 171 (312)
T 3ko8_A 127 ---EEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPR 171 (312)
T ss_dssp ---TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTT
T ss_pred ---CCCCCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcC
Confidence 0111222222222223334445556677788777777 6788864
No 62
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=72.10 E-value=4.1 Score=40.36 Aligned_cols=71 Identities=18% Similarity=0.315 Sum_probs=40.6
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
..++.++|+ +++++||+||.+.- .+..+.+++...+.++.+.+.+ ++||.... .++.. ..
T Consensus 378 ~~i~~~~d~-~~~~~aDlVIeaVp--------------e~~~vk~~v~~~l~~~~~~~~I-lasntStl---~i~~l-a~ 437 (725)
T 2wtb_A 378 SLLKGSLDY-ESFRDVDMVIEAVI--------------ENISLKQQIFADLEKYCPQHCI-LASNTSTI---DLNKI-GE 437 (725)
T ss_dssp TSEEEESSS-GGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCE-EEECCSSS---CHHHH-TT
T ss_pred cceEEeCCH-HHHCCCCEEEEcCc--------------CCHHHHHHHHHHHHhhCCCCcE-EEeCCCCC---CHHHH-HH
Confidence 446778899 48999999999752 1233445555667777654432 35565432 12332 22
Q ss_pred cCCCCCCCEEEE
Q 023853 98 VGTYDPKRLLGV 109 (276)
Q Consensus 98 ~~~~~~~rviG~ 109 (276)
.... +.+++|+
T Consensus 438 ~~~~-p~~~iG~ 448 (725)
T 2wtb_A 438 RTKS-QDRIVGA 448 (725)
T ss_dssp TCSC-TTTEEEE
T ss_pred HhcC-CCCEEEe
Confidence 2222 3567776
No 63
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=71.74 E-value=3.9 Score=38.09 Aligned_cols=62 Identities=19% Similarity=0.272 Sum_probs=38.9
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivv-tNP~d 85 (276)
.+..|+|+++++++||+||++-+.|...+.. .-+...+++.++.+.++- +..++|.- |-|..
T Consensus 71 ~l~~ttd~~ea~~~aDvvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pg 134 (446)
T 4a7p_A 71 RLSFTTDLAEGVKDADAVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVG 134 (446)
T ss_dssp CEEEESCHHHHHTTCSEEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTT
T ss_pred CEEEECCHHHHHhcCCEEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCch
Confidence 3678999999999999999987776542111 122344555556666665 44455544 34554
No 64
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=70.94 E-value=10 Score=35.26 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=46.3
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCCcHHHHHHHHH
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGM-TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVPIAAEVFK 96 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivv-tNP~d~~~~v~t~~~~ 96 (276)
+..|+|+++++++||+++|+.+.|.+++. ..+..+. ...+.+++.++..++..+|++= |=|..++=-++...+.
T Consensus 85 l~~tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~---~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~ 160 (444)
T 3vtf_A 85 LSFAESAEEAVAATDATFIAVGTPPAPDGSADLRYVE---AAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVA 160 (444)
T ss_dssp EEECSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHH
T ss_pred eeEEcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHH---HHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHH
Confidence 56789999999999999999888765432 2233333 3456677777766554544443 5676643323433333
No 65
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=70.57 E-value=4.1 Score=34.40 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=41.1
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++++.|+||..+|.. ......+.+..|+.-...+.+.+.+.+. +.||++|
T Consensus 57 ~~~~~~~~~D~vi~~Ag~~--~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iv~~S 110 (267)
T 3rft_A 57 AVNAMVAGCDGIVHLGGIS--VEKPFEQILQGNIIGLYNLYEAARAHGQ-PRIVFAS 110 (267)
T ss_dssp HHHHHHTTCSEEEECCSCC--SCCCHHHHHHHHTHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred HHHHHHcCCCEEEECCCCc--CcCCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEEc
Confidence 4567788999999999874 2345677888999999999999988754 4455554
No 66
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=70.45 E-value=12 Score=30.54 Aligned_cols=56 Identities=16% Similarity=0.125 Sum_probs=43.0
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.++.++++++|+||..+|... .......+..|+.-...+.+.+++.+. +.+|.+|.
T Consensus 76 ~~~~~~~~~~D~vi~~ag~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 131 (236)
T 3e8x_A 76 EDFSHAFASIDAVVFAAGSGP--HTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSS 131 (236)
T ss_dssp SCCGGGGTTCSEEEECCCCCT--TSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred HHHHHHHcCCCEEEECCCCCC--CCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 567789999999999998653 245677788899888999999988764 35555543
No 67
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=69.02 E-value=4.8 Score=37.89 Aligned_cols=49 Identities=22% Similarity=0.433 Sum_probs=31.8
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 81 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvt 81 (276)
..++.++|++ ++++||+||.+... +..+.+++...+.++. |+++++..|
T Consensus 71 ~~i~~~~~~~-~~~~aDlVIeAVpe--------------~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 71 KRLIPVTDIH-ALAAADLVIEAASE--------------RLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp HTEEEECCGG-GGGGCSEEEECCCC--------------CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred hceeEeCCHH-HhcCCCEEEEcCCC--------------cHHHHHHHHHHHHHhhccCcEEEecC
Confidence 3567788996 79999999997521 2344455666677776 455543333
No 68
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=68.46 E-value=4.4 Score=38.03 Aligned_cols=56 Identities=14% Similarity=0.147 Sum_probs=36.7
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEe
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLI 80 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~~~vivv 80 (276)
.+..++|+++++++||+||++...|.+.+.+ -+...++++++.|.++.+ +.+|+..
T Consensus 71 ~l~~ttd~~~a~~~aDvviiaVptp~~~~~~------~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 71 RLRFSTDIEAAVAHGDVQFIAVGTPPDEDGS------ADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp CEEEECCHHHHHHHCSEEEECCCCCBCTTSS------BCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CEEEECCHHHHhhcCCEEEEEeCCCcccCCC------ccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3678899988999999999988776533221 233445555666666654 4455444
No 69
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=67.64 E-value=6.3 Score=34.38 Aligned_cols=108 Identities=13% Similarity=0.063 Sum_probs=62.7
Q ss_pred CHHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC------CCCcHHHHHHHHH
Q 023853 25 QLEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP------VNSTVPIAAEVFK 96 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP------~d~~~~v~t~~~~ 96 (276)
+++++++++|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+.+- +|.+|.. .+. .+.
T Consensus 93 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~v~~SS~~vyg~~~~~---~~~---- 164 (351)
T 3ruf_A 93 TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQS-FTYAASSSTYGDHPAL---PKV---- 164 (351)
T ss_dssp HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSE-EEEEEEGGGGTTCCCS---SBC----
T ss_pred HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEecHHhcCCCCCC---CCc----
Confidence 4667899999999999853211 13456678899999999999998886543 4444311 000 000
Q ss_pred HcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeec
Q 023853 97 KVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 140 (276)
Q Consensus 97 ~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~h 140 (276)
......+....|.+.....++-..+++..|++..-++ +.|+|..
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 209 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRR 209 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTT
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcC
Confidence 0000111111222223334444555667788888888 7788865
No 70
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=67.63 E-value=8.9 Score=32.83 Aligned_cols=92 Identities=18% Similarity=0.164 Sum_probs=51.6
Q ss_pred cccCCcccccceecCCCHH-hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCc
Q 023853 9 KFDVDSRAVRGFLGQQQLE-DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87 (276)
Q Consensus 9 ~~d~~~~~~~~i~~~~d~~-~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~ 87 (276)
+.|+.+....+-......+ +.+..||+|++|+. .++..-.+.+-+++.++..+++.-|.-.+
T Consensus 140 V~d~~p~~~~~~~~~~~~e~~~l~~~D~v~iTGs-----------------TlvN~Ti~~lL~~~~~~~~vvl~GPS~~~ 202 (249)
T 3npg_A 140 VFERNMKLWDRDTYSDTLEYHILPEVDGIIASAS-----------------CIVNGTLDMILDRAKKAKLIVITGPTGQL 202 (249)
T ss_dssp EECCSGGGCCSSEECGGGHHHHGGGCSEEEEETT-----------------HHHHTCHHHHHHHCSSCSEEEEESGGGCS
T ss_pred EEECCCcccCCCCCChhHHHhhhccCCEEEEEee-----------------eeccCCHHHHHHhCcccCeEEEEecCchh
Confidence 3455544433222223333 37889999999985 23333445566667666443443465544
Q ss_pred HHHHHHHHHHcCCCCCCCEEEEeechHHHHHHHHHH
Q 023853 88 VPIAAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAE 123 (276)
Q Consensus 88 ~~v~t~~~~~~~~~~~~rviG~t~lds~R~~~~la~ 123 (276)
+|.+ +.++.-+-+-|+-..|..++.+.++.
T Consensus 203 ~P~~------~~~~Gv~~l~g~~v~d~~~~l~~i~~ 232 (249)
T 3npg_A 203 LPEF------LKGTKVTHLASMKVTNIEKALVKLKL 232 (249)
T ss_dssp CGGG------GTTSSCCEEEEEEESCHHHHHHHHHH
T ss_pred hHHH------HhhCCccEEEEEEecCHHHHHHHHHc
Confidence 3321 12344455666677888888887753
No 71
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=65.64 E-value=5.4 Score=34.49 Aligned_cols=56 Identities=18% Similarity=0.099 Sum_probs=40.4
Q ss_pred HHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++.++|+||-++|..... ..+..+.+..|+.-...+.+.+.+++..+.+|.+|
T Consensus 69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 126 (336)
T 2hun_A 69 VKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVS 126 (336)
T ss_dssp HHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 456678999999999864210 12345678889999999999999886545666665
No 72
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=65.29 E-value=22 Score=30.43 Aligned_cols=51 Identities=22% Similarity=0.344 Sum_probs=33.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC--CPKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~~~vivvtNP~d 85 (276)
++..+.|..+++++||+||++.- |. .++++.+.+..+ .++.+++.+++...
T Consensus 50 gi~~~~~~~~~~~~aDvVilav~----p~------------~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 50 GVHTTQDNRQGALNADVVVLAVK----PH------------QIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp CCEEESCHHHHHSSCSEEEECSC----GG------------GHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred CCEEeCChHHHHhcCCeEEEEeC----HH------------HHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 45566788889999999999761 21 223344444444 45667777777666
No 73
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=63.42 E-value=11 Score=35.02 Aligned_cols=65 Identities=15% Similarity=0.310 Sum_probs=37.4
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCCcHHHHHHHHHHcCCC
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTY 101 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d~~~~v~t~~~~~~~~~ 101 (276)
++|+ +++++||+||.+... +..+.+++...+..+. |+++++ +|....- ++. +......
T Consensus 106 ~~~~-~~~~~aDlVIeaVpe--------------~~~~k~~v~~~l~~~~~~~~ii~--snTs~~~---~~~-la~~~~~ 164 (463)
T 1zcj_A 106 SSST-KELSTVDLVVEAVFE--------------DMNLKKKVFAELSALCKPGAFLC--TNTSALN---VDD-IASSTDR 164 (463)
T ss_dssp ESCG-GGGTTCSEEEECCCS--------------CHHHHHHHHHHHHHHSCTTCEEE--ECCSSSC---HHH-HHTTSSC
T ss_pred cCCH-HHHCCCCEEEEcCCC--------------CHHHHHHHHHHHHhhCCCCeEEE--eCCCCcC---HHH-HHHHhcC
Confidence 6788 489999999998631 3344455555666666 455544 4555421 232 2333322
Q ss_pred CCCCEEEE
Q 023853 102 DPKRLLGV 109 (276)
Q Consensus 102 ~~~rviG~ 109 (276)
+.+++|+
T Consensus 165 -~~~~ig~ 171 (463)
T 1zcj_A 165 -PQLVIGT 171 (463)
T ss_dssp -GGGEEEE
T ss_pred -CcceEEe
Confidence 3567776
No 74
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=62.97 E-value=9 Score=35.54 Aligned_cols=62 Identities=23% Similarity=0.356 Sum_probs=36.1
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivv-tNP~d 85 (276)
.+..++|+++++++||+||++...+..+.... -+...+++.++.+.+..|..+++.- |-|..
T Consensus 96 ~l~~ttd~~ea~~~aDvViiaVPt~~~~~~~~-----~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pg 158 (432)
T 3pid_A 96 NFRATTDKHDAYRNADYVIIATPTDYDPKTNY-----FNTSTVEAVIRDVTEINPNAVMIIKSTIPVG 158 (432)
T ss_dssp CEEEESCHHHHHTTCSEEEECCCCEEETTTTE-----EECHHHHHHHHHHHHHCTTSEEEECSCCCTT
T ss_pred CeEEEcCHHHHHhCCCEEEEeCCCcccccccc-----ccHHHHHHHHHHHHhcCCCcEEEEeCCCChH
Confidence 47789999999999999999865442111110 1122233333344444566666554 56776
No 75
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=62.61 E-value=12 Score=32.45 Aligned_cols=78 Identities=22% Similarity=0.232 Sum_probs=48.4
Q ss_pred cCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc-EEEEecCCCCCcHHHHHHHHHHcCC
Q 023853 22 GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKA-IVNLISNPVNSTVPIAAEVFKKVGT 100 (276)
Q Consensus 22 ~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~-~vivvtNP~d~~~~v~t~~~~~~~~ 100 (276)
.....++.+..||+|++|+. .++..-.+.+-+.++++ .+++++ |.-.+++. + .+ .|
T Consensus 176 p~~~~e~ll~~aD~viiTGs-----------------TlvN~Ti~~lL~~~~~a~~vvl~G-PS~p~~P~---l-f~-~G 232 (270)
T 2h1q_A 176 PLPASEFILPECDYVYITCA-----------------SVVDKTLPRLLELSRNARRITLVG-PGTPLAPV---L-FE-HG 232 (270)
T ss_dssp EGGGHHHHGGGCSEEEEETH-----------------HHHHTCHHHHHHHTTTSSEEEEES-TTCCCCGG---G-GG-TT
T ss_pred ChHHHHHHhhcCCEEEEEee-----------------eeecCCHHHHHHhCccCCeEEEEe-cChhhhHH---H-Hh-cC
Confidence 33446667899999999983 33344445555666677 555554 66655552 2 22 33
Q ss_pred CCCCCEEEEeechHHHHHHHHHHH
Q 023853 101 YDPKRLLGVTMLDVVRANTFVAEV 124 (276)
Q Consensus 101 ~~~~rviG~t~lds~R~~~~la~~ 124 (276)
-.-+-|+...|..++.+.+++-
T Consensus 233 --v~~l~G~~V~D~~~~~~~i~~G 254 (270)
T 2h1q_A 233 --LQELSGFMVKDNARAFRIVAGA 254 (270)
T ss_dssp --CSEEEEEEESCHHHHHHHHTTS
T ss_pred --cCEEEEeEecCHHHHHHHHHcC
Confidence 3455566778998888877543
No 76
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=62.58 E-value=4.8 Score=35.90 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHc---CCCCCCCEEEE-eech
Q 023853 60 IVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKV---GTYDPKRLLGV-TMLD 113 (276)
Q Consensus 60 i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~---~~~~~~rviG~-t~ld 113 (276)
-++++...++..+.+.+|+-.| |.+ ++.-++... .|+|+++|||+ ..++
T Consensus 147 ~~~~l~~~l~~~G~~v~ivSas-~~~----~v~~~a~~~~~~ygIp~e~ViG~~~~~~ 199 (327)
T 4as2_A 147 GQRELYNKLMENGIEVYVISAA-HEE----LVRMVAADPRYGYNAKPENVIGVTTLLK 199 (327)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE-EHH----HHHHHHTCGGGSCCCCGGGEEEECEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCC-cHH----HHHHHHhhcccccCCCHHHeEeeeeeee
Confidence 4678888888888888877776 566 554444432 68999999999 4444
No 77
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=61.86 E-value=8.2 Score=32.35 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=35.5
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
++..+.++++++++||+||++.. + . . ++++.+.+..+.+++.++..+|..+
T Consensus 45 g~~~~~~~~~~~~~~D~vi~~v~-~---~-~-----------~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 45 TLNYMSSNEELARHCDIIVCAVK-P---D-I-----------AGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp SSEECSCHHHHHHHCSEEEECSC-T---T-T-----------HHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred ceEEeCCHHHHHhcCCEEEEEeC-H---H-H-----------HHHHHHHHHHhcCCCEEEEECCCCC
Confidence 45567788888999999999864 1 1 1 2344455555557778888888887
No 78
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=61.22 E-value=27 Score=30.03 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=41.3
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRKPGMTR-DDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k~g~~r-~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
..+++++++++|+||-+++.......+. .+.+..|+.-...+.+.+.+...-..+|.+|
T Consensus 68 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~S 127 (337)
T 2c29_D 68 EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127 (337)
T ss_dssp TTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEee
Confidence 3456778999999999887542122233 3577889999999999888876334566655
No 79
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=60.80 E-value=25 Score=29.99 Aligned_cols=58 Identities=16% Similarity=0.035 Sum_probs=42.1
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.+++++++++|+||-.++... .+.+..+.+..|+.-...+.+.+.+......+|.+|.
T Consensus 75 ~~~~~~~~~~d~vih~A~~~~-~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 75 GAYDEVIKGAAGVAHIASVVS-FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp TTTTTTTTTCSEEEECCCCCS-CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred HHHHHHHcCCCEEEEeCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 456667889999999988653 2346677888999999999998875433356666653
No 80
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=59.95 E-value=6.8 Score=34.04 Aligned_cols=55 Identities=15% Similarity=0.002 Sum_probs=39.2
Q ss_pred CHHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+. .+|.+|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~S 124 (348)
T 1oc2_A 68 LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI--RFHHVS 124 (348)
T ss_dssp HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC--eEEEec
Confidence 4567889999999999864310 013356778899999999999988753 555554
No 81
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=59.58 E-value=8.7 Score=34.73 Aligned_cols=22 Identities=9% Similarity=0.208 Sum_probs=18.7
Q ss_pred cceecCCCHHhhcCCCcEEEEc
Q 023853 18 RGFLGQQQLEDALTGMDIVIIP 39 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ 39 (276)
.+|..+.|+++++++||+|...
T Consensus 236 ~~v~~~~d~~eav~~aDvvyt~ 257 (358)
T 4h31_A 236 GKITLTENVAEGVQGCDFLYTD 257 (358)
T ss_dssp CEEEEESCHHHHHTTCSEEEEC
T ss_pred CcceeccCHHHHhccCcEEEEE
Confidence 3577899999999999998854
No 82
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=59.22 E-value=25 Score=30.57 Aligned_cols=65 Identities=14% Similarity=0.221 Sum_probs=41.8
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
.+..++|.+ +++++|+||++.-... ++++.+.+..+ .++.+|+.++|..+ ... .+.+
T Consensus 74 ~~~~~~~~~-~~~~~D~vilavk~~~----------------~~~~l~~l~~~l~~~~~iv~~~nGi~----~~~-~l~~ 131 (318)
T 3hwr_A 74 KVSASSDPS-AVQGADLVLFCVKSTD----------------TQSAALAMKPALAKSALVLSLQNGVE----NAD-TLRS 131 (318)
T ss_dssp CCEEESCGG-GGTTCSEEEECCCGGG----------------HHHHHHHHTTTSCTTCEEEEECSSSS----HHH-HHHH
T ss_pred eeeeeCCHH-HcCCCCEEEEEccccc----------------HHHHHHHHHHhcCCCCEEEEeCCCCC----cHH-HHHH
Confidence 455677886 5799999999763221 24455566655 46778888999998 433 2334
Q ss_pred cCCCCCCCEEE
Q 023853 98 VGTYDPKRLLG 108 (276)
Q Consensus 98 ~~~~~~~rviG 108 (276)
. +| +++++
T Consensus 132 ~--~~-~~vl~ 139 (318)
T 3hwr_A 132 L--LE-QEVAA 139 (318)
T ss_dssp H--CC-SEEEE
T ss_pred H--cC-CcEEE
Confidence 3 44 66765
No 83
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=56.81 E-value=29 Score=27.29 Aligned_cols=50 Identities=24% Similarity=0.331 Sum_probs=34.3
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCC
Q 023853 30 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS-NPV 84 (276)
Q Consensus 30 l~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt-NP~ 84 (276)
-...|+|++..|.... ..+ .+.+.+| +++++..+++.+|++.+++++ .|+
T Consensus 72 ~~~pd~Vvi~~G~ND~-~~~-~~~~~~~---l~~ii~~l~~~~p~~~ii~~~~~P~ 122 (200)
T 4h08_A 72 NTKFDVIHFNNGLHGF-DYT-EEEYDKS---FPKLIKIIRKYAPKAKLIWANTTPV 122 (200)
T ss_dssp HSCCSEEEECCCSSCT-TSC-HHHHHHH---HHHHHHHHHHHCTTCEEEEECCCCC
T ss_pred cCCCCeEEEEeeeCCC-CCC-HHHHHHH---HHHHHHHHhhhCCCccEEEeccCCC
Confidence 3578999998886532 223 3334444 577888899999999877775 454
No 84
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=56.29 E-value=13 Score=36.92 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=47.4
Q ss_pred ccceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCCcHHHHHHHH
Q 023853 17 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIVNLISNPVNSTVPIAAEVF 95 (276)
Q Consensus 17 ~~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~~~vivvtNP~d~~~~v~t~~~ 95 (276)
...+..++|++ +++|||+||=+. ..|.++=+++-.++.++++ ++ |+.||-... -++...
T Consensus 379 ~~~~~~~~~~~-~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl---~i~~ia 438 (742)
T 3zwc_A 379 KPKLRFSSSTK-ELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA--FLCTNTSAL---NVDDIA 438 (742)
T ss_dssp CCCEEEESCGG-GGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC--EEEECCSSS---CHHHHH
T ss_pred hhhhcccCcHH-HHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc--eEEecCCcC---ChHHHH
Confidence 34567888996 799999988653 2356666778888888874 55 467776664 233333
Q ss_pred HHcCCCCCCCEEEE
Q 023853 96 KKVGTYDPKRLLGV 109 (276)
Q Consensus 96 ~~~~~~~~~rviG~ 109 (276)
..+. .|+|++|+
T Consensus 439 -~~~~-~p~r~ig~ 450 (742)
T 3zwc_A 439 -SSTD-RPQLVIGT 450 (742)
T ss_dssp -TTSS-CGGGEEEE
T ss_pred -hhcC-Cccccccc
Confidence 3333 35789987
No 85
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=56.15 E-value=5.9 Score=36.90 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=40.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLI-SNPVNS 86 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivv-tNP~d~ 86 (276)
.+..++|+++++++||+||++...|........+ -..+...+.+..+.+.++. ++.+|+.. |+|...
T Consensus 69 ~~~~t~~~~e~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~ 137 (467)
T 2q3e_A 69 NLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRA 137 (467)
T ss_dssp TEEEESCHHHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTH
T ss_pred CEEEECCHHHHHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchH
Confidence 4677889988999999999987766432211000 0122344555566666654 44455544 677763
No 86
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=55.08 E-value=20 Score=30.77 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=37.8
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRKPGMT-RDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
..+++++++++|+||-+|+.......+ ..+.+..|+.-...+.+.+.+...-..+|.+|
T Consensus 71 ~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~S 130 (338)
T 2rh8_A 71 ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS 130 (338)
T ss_dssp SSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred hHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEe
Confidence 346677899999999988753211112 23477889999999999888764234566665
No 87
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=54.53 E-value=11 Score=37.31 Aligned_cols=44 Identities=14% Similarity=0.214 Sum_probs=29.4
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEE
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCP-KAIV 77 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~~~v 77 (276)
.++.++|+ +++++||+||.+.-. +..+.+++...+.++.+ ++++
T Consensus 381 ~i~~~~d~-~~~~~aDlVIeaV~e--------------~~~vk~~v~~~l~~~~~~~~Il 425 (715)
T 1wdk_A 381 GIRPTLSY-GDFGNVDLVVEAVVE--------------NPKVKQAVLAEVENHVREDAIL 425 (715)
T ss_dssp HEEEESSS-TTGGGCSEEEECCCS--------------CHHHHHHHHHHHHTTSCTTCEE
T ss_pred CeEEECCH-HHHCCCCEEEEcCCC--------------CHHHHHHHHHHHHhhCCCCeEE
Confidence 46778888 589999999997521 23344555566777764 5544
No 88
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=54.12 E-value=8 Score=33.58 Aligned_cols=108 Identities=11% Similarity=-0.034 Sum_probs=58.5
Q ss_pred CHHhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-------CCCcHHHHHH
Q 023853 25 QLEDALTG--MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP-------VNSTVPIAAE 93 (276)
Q Consensus 25 d~~~al~d--aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP-------~d~~~~v~t~ 93 (276)
++++++++ +|+||-+++..... .....+.+..|+.-...+.+.+.+.+.. .+|.+|.- .+. .++
T Consensus 89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~v~~SS~~vy~~~~~~~---~~~- 163 (346)
T 4egb_A 89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHI-KLVQVSTDEVYGSLGKTG---RFT- 163 (346)
T ss_dssp HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTS-EEEEEEEGGGGCCCCSSC---CBC-
T ss_pred HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeCchHHhCCCCcCC---CcC-
Confidence 35566776 99999998864321 1345667889999999999999888653 34444320 000 000
Q ss_pred HHHHcCCCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeec
Q 023853 94 VFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 140 (276)
Q Consensus 94 ~~~~~~~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~h 140 (276)
......+....|.+.....++-..+++..|++..-++ +.|+|..
T Consensus 164 ---E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 208 (346)
T 4egb_A 164 ---EETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPY 208 (346)
T ss_dssp ---TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTT
T ss_pred ---CCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcC
Confidence 1111112222222222233444455666788877777 7788854
No 89
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=53.97 E-value=15 Score=31.89 Aligned_cols=111 Identities=12% Similarity=-0.002 Sum_probs=60.8
Q ss_pred CHHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcH---HHHHHHHHHcC
Q 023853 25 QLEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTV---PIAAEVFKKVG 99 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~---~v~t~~~~~~~ 99 (276)
+++++++++|+||.+++..... ..+..+.+..|+.-...+++.+.+.+. ..+|.+|...-.-. ..+. ...
T Consensus 95 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~SS~~~~~~~~~~~~~----E~~ 169 (352)
T 1sb8_A 95 DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-QSFTYAASSSTYGDHPGLPKV----EDT 169 (352)
T ss_dssp HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEEEGGGGTTCCCSSBC----TTC
T ss_pred HHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEeccHHhcCCCCCCCCC----CCC
Confidence 3567789999999999854211 124566778899999999999888654 34555542110000 0000 000
Q ss_pred CCCCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeec
Q 023853 100 TYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 140 (276)
Q Consensus 100 ~~~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~h 140 (276)
...+....|.+.....++-..+++..|++..-++ +.|+|..
T Consensus 170 ~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~ 211 (352)
T 1sb8_A 170 IGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRR 211 (352)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcC
Confidence 0011111122222233444445666788887778 7788854
No 90
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=53.30 E-value=10 Score=31.74 Aligned_cols=47 Identities=17% Similarity=0.310 Sum_probs=30.3
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHhhCCCcEEEEecCCCC
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTL-CEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i-~~~i~~~~p~~~vivvtNP~d 85 (276)
..+.++++++||+||++.-.+. -...+.++ .+.+ ++.++|.++||.+
T Consensus 81 ~~~~~e~~~~aDvVilavp~~~------------~~~~~~~i~~~~l----~g~ivi~~s~~~~ 128 (245)
T 3dtt_A 81 LAAFADVAAGAELVVNATEGAS------------SIAALTAAGAENL----AGKILVDIANPLD 128 (245)
T ss_dssp EEEHHHHHHHCSEEEECSCGGG------------HHHHHHHHCHHHH----TTSEEEECCCCEE
T ss_pred ccCHHHHHhcCCEEEEccCcHH------------HHHHHHHhhhhhc----CCCEEEECCCCCC
Confidence 4577789999999999753221 11233333 2222 6779999999874
No 91
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=52.83 E-value=11 Score=32.96 Aligned_cols=56 Identities=16% Similarity=-0.019 Sum_probs=38.4
Q ss_pred HHhhcC--CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh--CCC------cEEEEec
Q 023853 26 LEDALT--GMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKC--CPK------AIVNLIS 81 (276)
Q Consensus 26 ~~~al~--daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~--~p~------~~vivvt 81 (276)
++++++ ++|+||-++|..... .....+.+..|+.-...+.+.+.+. +-+ +.+|.+|
T Consensus 65 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~S 132 (361)
T 1kew_A 65 ITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS 132 (361)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred HHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeC
Confidence 445666 899999999864310 1234567788998888899888887 533 4666665
No 92
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=52.48 E-value=24 Score=30.28 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=34.6
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||.+++..........+.+..|+.....+.+.+.+.+. ..+|.+|
T Consensus 70 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~S 125 (342)
T 2x4g_A 70 GLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARV-PRILYVG 125 (342)
T ss_dssp HHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTC-SCEEEEC
T ss_pred HHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCC-CeEEEEC
Confidence 4567889999999998864322234566788899999999999988754 3445554
No 93
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=52.37 E-value=15 Score=32.17 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=35.1
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d 85 (276)
.+..++|+++++++||+||++.-.. .++++.+.+..+. ++.+++.++|-.+
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~~~----------------~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVPHQ----------------FIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCCGG----------------GHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CeEEEcCHHHHHcCCCEEEEeCCHH----------------HHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 3566788988899999999985211 2345556666654 5778888888543
No 94
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=51.56 E-value=18 Score=32.28 Aligned_cols=51 Identities=10% Similarity=0.167 Sum_probs=35.9
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----hC-CCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK----CC-PKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~----~~-p~~~vivvtNP~d 85 (276)
.+..++|+++++++||+||++... ..++++.+.+.. +. ++.+++.++|-.+
T Consensus 90 ~i~~~~~~~ea~~~aDvVilav~~----------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 90 NIVAHSDLASVINDADLLIFIVPC----------------QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp TEEEESSTHHHHTTCSEEEECCCH----------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred CeEEECCHHHHHcCCCEEEEcCCH----------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 466778888889999999997521 235666667765 43 5678888887543
No 95
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=50.98 E-value=25 Score=29.40 Aligned_cols=49 Identities=12% Similarity=0.096 Sum_probs=31.6
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPV 84 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~ 84 (276)
+..+.|+++++++||+||++.... .++++.+.+.++. ++.+++..++-.
T Consensus 56 ~~~~~~~~~~~~~~Dvvi~av~~~----------------~~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 56 AEYTTDLAEVNPYAKLYIVSLKDS----------------AFAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CEEESCGGGSCSCCSEEEECCCHH----------------HHHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred CceeCCHHHHhcCCCEEEEecCHH----------------HHHHHHHHHHhhcCCCcEEEECCCCC
Confidence 445678888889999999975311 1244555665555 566777776633
No 96
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=50.90 E-value=24 Score=28.71 Aligned_cols=52 Identities=15% Similarity=0.195 Sum_probs=33.2
Q ss_pred cCCCcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhhC-----CCcEEEEecCCC
Q 023853 30 LTGMDIVIIPAGVPRKPGM--TRDDLFNINAGIVKTLCEGIAKCC-----PKAIVNLISNPV 84 (276)
Q Consensus 30 l~daDiVii~ag~~~k~g~--~r~~~~~~N~~i~~~i~~~i~~~~-----p~~~vivvtNP~ 84 (276)
.+.+|+|+|..|...-... ...+.+..| ++++++.+++.. |++.|++++.|.
T Consensus 99 ~~p~d~VvI~~GtND~~~~~~~~~~~~~~~---l~~li~~ir~~~~~~~~p~~~iil~~p~~ 157 (232)
T 3dci_A 99 HMPLDLVIIMLGTNDIKPVHGGRAEAAVSG---MRRLAQIVETFIYKPREAVPKLLIVAPPP 157 (232)
T ss_dssp HCSCSEEEEECCTTTTSGGGTSSHHHHHHH---HHHHHHHHHHCCCSSTTCCCEEEEEECCC
T ss_pred CCCCCEEEEEeccCCCccccCCCHHHHHHH---HHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence 3456999998886532111 123344444 567888888877 888888877443
No 97
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=50.07 E-value=35 Score=29.67 Aligned_cols=50 Identities=14% Similarity=0.186 Sum_probs=33.3
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 85 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d 85 (276)
+..+.+..+++++||+||++.. + . .++++.+.+..+- ++.+|+.++|...
T Consensus 72 ~~~~~~~~e~~~~aDvVilav~-~---~------------~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 72 VKLTPHNKETVQHSDVLFLAVK-P---H------------IIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp CEEESCHHHHHHHCSEEEECSC-G---G------------GHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred CEEeCChHHHhccCCEEEEEeC-H---H------------HHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 4556678788899999999763 1 1 2334445555543 5678888888776
No 98
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=49.33 E-value=14 Score=31.86 Aligned_cols=56 Identities=16% Similarity=-0.044 Sum_probs=39.6
Q ss_pred HHhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALTG--MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~d--aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ .|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+....+|.+|
T Consensus 78 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 137 (335)
T 1rpn_A 78 VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAS 137 (335)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 4455665 59999998864311 23567788899999999999998886435555554
No 99
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=49.29 E-value=54 Score=27.02 Aligned_cols=54 Identities=19% Similarity=0.148 Sum_probs=40.0
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++++.|+||..++.. ......+.+..|+.-...+.+.+.+.+. +.+|.+|
T Consensus 56 ~~~~~~~~~d~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~S 109 (267)
T 3ay3_A 56 AVHDLVKDCDGIIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLGK-PRIVFAS 109 (267)
T ss_dssp HHHHHHTTCSEEEECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred HHHHHHcCCCEEEECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEeC
Confidence 3567889999999998865 2345677788999999999998887643 3455554
No 100
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=48.74 E-value=51 Score=27.57 Aligned_cols=55 Identities=11% Similarity=0.013 Sum_probs=41.1
Q ss_pred CHHhhcCC-----CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTG-----MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~d-----aDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
.+++++++ +|+||-+++.......+..+.+..|+.....+.+.+.+.+. .+|.+|
T Consensus 56 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 115 (310)
T 1eq2_A 56 FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS 115 (310)
T ss_dssp HHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred HHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence 34556664 99999998865443456778889999999999999998865 455554
No 101
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=47.87 E-value=21 Score=30.72 Aligned_cols=56 Identities=18% Similarity=0.076 Sum_probs=38.5
Q ss_pred CHHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++.++|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+. ..+|.+|
T Consensus 69 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~-~~~v~~S 126 (337)
T 1r6d_A 69 LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV-GRVVHVS 126 (337)
T ss_dssp HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred HHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC-CEEEEec
Confidence 3556788999999998854210 013356778899999999999988754 3455544
No 102
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.59 E-value=15 Score=29.52 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=35.8
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||.++|... +..+.+..|....+.+.+.+.+.+.+ .+|.+|
T Consensus 60 ~~~~~~~~~d~vi~~a~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 111 (227)
T 3dhn_A 60 EVCEVCKGADAVISAFNPGW----NNPDIYDETIKVYLTIIDGVKKAGVN-RFLMVG 111 (227)
T ss_dssp HHHHHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred HHHHHhcCCCEEEEeCcCCC----CChhHHHHHHHHHHHHHHHHHHhCCC-EEEEeC
Confidence 46678999999999987542 22235667888899999999887644 455554
No 103
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=46.49 E-value=19 Score=31.59 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=33.4
Q ss_pred eecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPV 84 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~ 84 (276)
+..++|+++ +.++|+||++.-. .-++++.+.+..+ .|+.+|+.++|..
T Consensus 59 ~~~~~~~~~-~~~~D~Vilavk~----------------~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 59 VRATHDAAA-LGEQDVVIVAVKA----------------PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp CEEESCHHH-HCCCSEEEECCCH----------------HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred eeEECCHHH-cCCCCEEEEeCCc----------------hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 556778874 7999999998631 1234555566655 4678888999995
No 104
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=46.18 E-value=11 Score=32.53 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=38.5
Q ss_pred CHHhhcC--CCcEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALT--GMDIVIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~--daDiVii~ag~~~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ +.|+||-.++.... ......+.+..|+.....+.+.+++.+.. .+|.+|
T Consensus 69 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~S 128 (341)
T 3enk_A 69 ALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVK-RIVFSS 128 (341)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred HHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCC-EEEEEe
Confidence 3455566 89999999986421 11234567888999999999999887644 444544
No 105
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=46.12 E-value=28 Score=30.06 Aligned_cols=73 Identities=25% Similarity=0.313 Sum_probs=47.3
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc-EEEEecCCCCCcHHHHHHHHHHcCCCCC
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKA-IVNLISNPVNSTVPIAAEVFKKVGTYDP 103 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~-~vivvtNP~d~~~~v~t~~~~~~~~~~~ 103 (276)
.-+..+..||+||||+. .++..-.+.+-+.+.++ .+++++ |.-.+++. ++ + .| -
T Consensus 179 ~~~~~lp~~D~viiTgs-----------------tlvN~Tl~~lL~~~~~a~~vvl~G-PStp~~P~---lf-~-~G--v 233 (270)
T 3l5o_A 179 ASEFILPECDYVYITCA-----------------SVVDKTLPRLLELSRNARRITLVG-PGTPLAPV---LF-E-HG--L 233 (270)
T ss_dssp GHHHHGGGCSEEEEETH-----------------HHHHTCHHHHHHHTTTSSEEEEES-TTCCCCGG---GG-G-TT--C
T ss_pred HHHHhhccCCEEEEEee-----------------hhhcCCHHHHHhhCCCCCEEEEEC-CCchhhHH---HH-h-cC--c
Confidence 34457899999999973 44445566666777777 455554 77655553 22 2 23 3
Q ss_pred CCEEEEeechHHHHHHHHH
Q 023853 104 KRLLGVTMLDVVRANTFVA 122 (276)
Q Consensus 104 ~rviG~t~lds~R~~~~la 122 (276)
.-+-|+...|..++.+.++
T Consensus 234 ~~laG~~V~d~~~~~~~i~ 252 (270)
T 3l5o_A 234 QELSGFMVKDNARAFRIVA 252 (270)
T ss_dssp SEEEEEEESCHHHHHHHHT
T ss_pred CEEEEEEEcCHHHHHHHHh
Confidence 4455556789988888775
No 106
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=45.91 E-value=6.1 Score=34.96 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=27.9
Q ss_pred ccccccccCCcccccce-ecCCCHHhhcCCCcEEEEcCCCCC
Q 023853 4 PLAQNKFDVDSRAVRGF-LGQQQLEDALTGMDIVIIPAGVPR 44 (276)
Q Consensus 4 ~~~~~~~d~~~~~~~~i-~~~~d~~~al~daDiVii~ag~~~ 44 (276)
||++-|.. ...-|.-. +.|.|+++-++.|||||.+.|.|.
T Consensus 194 Pla~LL~~-~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~ 234 (303)
T 4b4u_A 194 PMAMMLLQ-ANATVTICHSRTQNLPELVKQADIIVGAVGKAE 234 (303)
T ss_dssp HHHHHHHH-TTCEEEEECTTCSSHHHHHHTCSEEEECSCSTT
T ss_pred hHHHHHHh-cCCEEEEecCCCCCHHHHhhcCCeEEeccCCCC
Confidence 66666654 23333322 247799999999999999999763
No 107
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=45.50 E-value=16 Score=29.68 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=39.4
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
.++++++++.|+||..+|.... +....+.+..|..-...+++.+.+.+. +.++++|.
T Consensus 76 ~~~~~~~~~~d~vi~~ag~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~iv~~SS 132 (242)
T 2bka_A 76 DDYASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGC-KHFNLLSS 132 (242)
T ss_dssp GGGGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred HHHHHHhcCCCEEEECCCcccc-cCCcccceeeeHHHHHHHHHHHHHCCC-CEEEEEcc
Confidence 4566788899999999985421 122356677888888888888877653 45556653
No 108
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=45.41 E-value=35 Score=28.87 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=35.4
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCCcHHHHHHHHHHcCCCCCCCEE
Q 023853 29 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLL 107 (276)
Q Consensus 29 al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d~~~~v~t~~~~~~~~~~~~rvi 107 (276)
+++++|+||++.... .++++.+.+..+- ++.+++.++|..+ .. +.+.+ -+++++++
T Consensus 71 ~~~~~d~vi~~v~~~----------------~~~~v~~~l~~~l~~~~~iv~~~~g~~----~~-~~l~~--~~~~~~vi 127 (316)
T 2ew2_A 71 QNEQVDLIIALTKAQ----------------QLDAMFKAIQPMITEKTYVLCLLNGLG----HE-DVLEK--YVPKENIL 127 (316)
T ss_dssp TSCCCSEEEECSCHH----------------HHHHHHHHHGGGCCTTCEEEECCSSSC----TH-HHHTT--TSCGGGEE
T ss_pred cCCCCCEEEEEeccc----------------cHHHHHHHHHHhcCCCCEEEEecCCCC----cH-HHHHH--HcCCccEE
Confidence 445999999986311 1345556666654 6778888888877 22 22222 24556777
Q ss_pred -EEe
Q 023853 108 -GVT 110 (276)
Q Consensus 108 -G~t 110 (276)
|.+
T Consensus 128 ~g~~ 131 (316)
T 2ew2_A 128 VGIT 131 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 443
No 109
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=45.27 E-value=25 Score=30.63 Aligned_cols=22 Identities=23% Similarity=0.188 Sum_probs=17.7
Q ss_pred cceecCCCHHhhcCCCcEEEEcC
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~a 40 (276)
..++.++|++ ++++||+||.+.
T Consensus 60 ~~i~~~~~~~-~~~~aDlVieav 81 (293)
T 1zej_A 60 SKIEFTTTLE-KVKDCDIVMEAV 81 (293)
T ss_dssp GGEEEESSCT-TGGGCSEEEECC
T ss_pred CCeEEeCCHH-HHcCCCEEEEcC
Confidence 3577788897 599999999975
No 110
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=45.17 E-value=24 Score=30.86 Aligned_cols=55 Identities=18% Similarity=0.085 Sum_probs=42.1
Q ss_pred CHHhh-cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDA-LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~a-l~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++ ..++|+||-+||..........+.+..|+.-...+.+.+++.+.. +|.+|
T Consensus 82 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~V~~S 137 (362)
T 3sxp_A 82 DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK--VIYAS 137 (362)
T ss_dssp HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE--EEEEE
T ss_pred HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEeC
Confidence 34445 789999999999654444677888999999999999999887654 45554
No 111
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=45.11 E-value=32 Score=29.74 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=41.9
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
.+..++|.+ ++.++|+||++.-.. . ++++.+.++.+ .++.+|+.+.|-.+ .... +.+
T Consensus 57 ~~~~~~~~~-~~~~~D~vilavk~~----~------------~~~~l~~l~~~l~~~~~iv~l~nGi~----~~~~-l~~ 114 (312)
T 3hn2_A 57 HVKGYRAPE-EIGPMDLVLVGLKTF----A------------NSRYEELIRPLVEEGTQILTLQNGLG----NEEA-LAT 114 (312)
T ss_dssp CCCEESCHH-HHCCCSEEEECCCGG----G------------GGGHHHHHGGGCCTTCEEEECCSSSS----HHHH-HHH
T ss_pred eceeecCHH-HcCCCCEEEEecCCC----C------------cHHHHHHHHhhcCCCCEEEEecCCCC----cHHH-HHH
Confidence 345567776 589999999976322 1 12334445554 46788889999887 4333 333
Q ss_pred cCCCCCCCEEEE
Q 023853 98 VGTYDPKRLLGV 109 (276)
Q Consensus 98 ~~~~~~~rviG~ 109 (276)
. +|.++|++-
T Consensus 115 ~--~~~~~v~~~ 124 (312)
T 3hn2_A 115 L--FGAERIIGG 124 (312)
T ss_dssp H--TCGGGEEEE
T ss_pred H--CCCCcEEEE
Confidence 3 566777665
No 112
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=44.75 E-value=19 Score=30.56 Aligned_cols=45 Identities=9% Similarity=0.087 Sum_probs=28.1
Q ss_pred cCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecC
Q 023853 22 GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC--CPKAIVNLISN 82 (276)
Q Consensus 22 ~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~~~vivvtN 82 (276)
.+.|+++++++||+||++.... .++++.+.+..+ .++.+++.++|
T Consensus 56 ~~~~~~~~~~~aDvVilavp~~----------------~~~~v~~~l~~~~l~~~~ivi~~~~ 102 (290)
T 3b1f_A 56 ATADFKVFAALADVIILAVPIK----------------KTIDFIKILADLDLKEDVIITDAGS 102 (290)
T ss_dssp EESCTTTTGGGCSEEEECSCHH----------------HHHHHHHHHHTSCCCTTCEEECCCS
T ss_pred ccCCHHHhhcCCCEEEEcCCHH----------------HHHHHHHHHHhcCCCCCCEEEECCC
Confidence 3567777889999999976311 124555566655 35566665554
No 113
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=44.21 E-value=18 Score=29.59 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=28.0
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
+..+++++||+||++.- + ..++++...+.. .++.+++.++||..
T Consensus 74 ~~~~~~~~aDvVilavp----~------------~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 74 VELKDALQADVVILAVP----Y------------DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp CCHHHHTTSSEEEEESC----G------------GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred ChHHHHhcCCEEEEeCC----h------------HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 33457899999999762 1 223344444444 35568888899884
No 114
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=43.99 E-value=30 Score=27.29 Aligned_cols=49 Identities=22% Similarity=0.230 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhC-------CCcEEEEecCC
Q 023853 31 TGMDIVIIPAGVPRK---PGMTRDDLFNINAGIVKTLCEGIAKCC-------PKAIVNLISNP 83 (276)
Q Consensus 31 ~daDiVii~ag~~~k---~g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~~~vivvtNP 83 (276)
+..|+|++..|...- .+.+. +.+.. -++++++.+++.+ |++.|++++.|
T Consensus 82 ~p~d~vvi~~G~ND~~~~~~~~~-~~~~~---~l~~li~~~~~~~~~~~~~~P~~~iil~~~p 140 (216)
T 2q0q_A 82 LPLDLVIIMLGTNDTKAYFRRTP-LDIAL---GMSVLVTQVLTSAGGVGTTYPAPKVLVVSPP 140 (216)
T ss_dssp CSCSEEEEECCTGGGSGGGCCCH-HHHHH---HHHHHHHHHHTCTTTTTBCCCCCEEEEEECC
T ss_pred CCCCEEEEEecCcccchhcCCCH-HHHHH---HHHHHHHHHHHhcccccccCCCCeEEEEeCC
Confidence 345999998886432 13333 33333 3577888888888 89988888754
No 115
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=43.46 E-value=65 Score=27.80 Aligned_cols=54 Identities=9% Similarity=-0.011 Sum_probs=40.4
Q ss_pred HHhhcC-----CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALT-----GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~-----daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++ ++|+||-+++.......+..+.+..|+.-...+.+.+.+.+. .+|.+|
T Consensus 104 ~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~S 162 (357)
T 2x6t_A 104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS 162 (357)
T ss_dssp HHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred HHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 445565 599999999865443456778889999999999999988765 455554
No 116
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=43.39 E-value=12 Score=28.38 Aligned_cols=46 Identities=15% Similarity=0.275 Sum_probs=31.6
Q ss_pred ecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 21 LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 21 ~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
....+++++++++|+||.+.+.+. +-... ....+..+++.+++|.|
T Consensus 69 ~~~~~~~~~~~~~Divi~at~~~~-~~~~~------------------~~l~~g~~vid~~~p~~ 114 (144)
T 3oj0_A 69 VLINDIDSLIKNNDVIITATSSKT-PIVEE------------------RSLMPGKLFIDLGNPPN 114 (144)
T ss_dssp EECSCHHHHHHTCSEEEECSCCSS-CSBCG------------------GGCCTTCEEEECCSSCS
T ss_pred EeecCHHHHhcCCCEEEEeCCCCC-cEeeH------------------HHcCCCCEEEEccCCcc
Confidence 356788889999999999877552 11111 11234778999999988
No 117
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=43.39 E-value=13 Score=29.96 Aligned_cols=46 Identities=22% Similarity=0.158 Sum_probs=29.2
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
.+++++++++|+||++.... .. ..+++++.+.+ ++.+++.++|+.+
T Consensus 56 ~~~~~~~~~~D~Vi~~~~~~---------~~---~~~~~~l~~~~----~~~~vi~~~~g~~ 101 (212)
T 1jay_A 56 MKNEDAAEACDIAVLTIPWE---------HA---IDTARDLKNIL----REKIVVSPLVPVS 101 (212)
T ss_dssp EEHHHHHHHCSEEEECSCHH---------HH---HHHHHHTHHHH----TTSEEEECCCCEE
T ss_pred hhHHHHHhcCCEEEEeCChh---------hH---HHHHHHHHHHc----CCCEEEEcCCCcC
Confidence 56778899999999986411 11 12333333332 4678888898765
No 118
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=43.31 E-value=17 Score=31.15 Aligned_cols=55 Identities=18% Similarity=0.009 Sum_probs=38.3
Q ss_pred HHhhcC--CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALT--GMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~--daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++ ++|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+. ..+|.+|
T Consensus 59 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~v~~S 117 (330)
T 2c20_A 59 LRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV-DKFIFSS 117 (330)
T ss_dssp HHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred HHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCC-CEEEEeC
Confidence 455677 899999998864311 124566778899999999999887653 3455554
No 119
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=42.46 E-value=52 Score=26.59 Aligned_cols=41 Identities=32% Similarity=0.260 Sum_probs=25.1
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 29 ALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 29 al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
++++||+||++.. + ..++++.+.+..+-++.+++.++|+.+
T Consensus 54 ~~~~aD~vi~av~-~---------------~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 54 ATTLGEIVIMAVP-Y---------------PALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp CSSCCSEEEECSC-H---------------HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred HhccCCEEEEcCC-c---------------HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 6899999999763 1 012233333333323678888999665
No 120
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=42.23 E-value=55 Score=28.76 Aligned_cols=56 Identities=16% Similarity=-0.048 Sum_probs=41.0
Q ss_pred CHHhhcCCCcEEEEcCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKP---GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||-+++..... .....+.+..|+.-...+.+.+.+.+.. .+|.+|
T Consensus 86 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~~V~~S 144 (379)
T 2c5a_A 86 NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK-RFFYAS 144 (379)
T ss_dssp HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred HHHHHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 4567889999999998864321 3456778888999999999999877543 444444
No 121
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=42.20 E-value=32 Score=29.12 Aligned_cols=58 Identities=7% Similarity=-0.092 Sum_probs=36.8
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMT-RDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
.+++++++++|+||-+++.......+ ..+.+..|+.-...+.+.+.+...-..+|.+|
T Consensus 66 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~S 124 (322)
T 2p4h_X 66 DSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTS 124 (322)
T ss_dssp GGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred HHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence 45667899999999988632111111 23477889999999999888762223455554
No 122
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=41.88 E-value=50 Score=26.57 Aligned_cols=48 Identities=19% Similarity=0.219 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 31 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 31 ~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
.+.|+||+..|...-. .+ .+.+. .-++++++.+++..|++.|++++.|
T Consensus 92 ~~pd~vvi~~G~ND~~-~~-~~~~~---~~l~~~i~~l~~~~p~~~ii~~~~~ 139 (232)
T 1es9_A 92 IRPKIVVVWVGTNNHG-HT-AEQVT---GGIKAIVQLVNERQPQARVVVLGLL 139 (232)
T ss_dssp CCCSEEEEECCTTCTT-SC-HHHHH---HHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred CCCCEEEEEeecCCCC-CC-HHHHH---HHHHHHHHHHHHHCCCCeEEEecCC
Confidence 3689999988866422 22 23333 3467788888888899988887644
No 123
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=41.74 E-value=27 Score=28.01 Aligned_cols=42 Identities=19% Similarity=0.266 Sum_probs=29.6
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||..+|.. |.. .+.+.+.+++.+. +.+|++|
T Consensus 66 ~~~~~~~~~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~-~~iv~iS 107 (221)
T 3r6d_A 66 XLEQAVTNAEVVFVGAMES-------------GSD-MASIVKALSRXNI-RRVIGVS 107 (221)
T ss_dssp HHHHHHTTCSEEEESCCCC-------------HHH-HHHHHHHHHHTTC-CEEEEEE
T ss_pred HHHHHHcCCCEEEEcCCCC-------------Chh-HHHHHHHHHhcCC-CeEEEEe
Confidence 4567889999999998743 344 7778888877654 3455554
No 124
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=41.07 E-value=19 Score=31.36 Aligned_cols=57 Identities=19% Similarity=0.082 Sum_probs=39.2
Q ss_pred HHhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 26 LEDALTG--MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 26 ~~~al~d--aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
+++++++ .|+||-+++.+... .....+.+..|+.-...+.+.+.+.+..+.+|.+|.
T Consensus 72 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 72 LLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 4455665 79999999864211 124557788899988999999888754456666653
No 125
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=39.76 E-value=30 Score=29.99 Aligned_cols=71 Identities=11% Similarity=0.090 Sum_probs=41.5
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
.+..++|.+++.+++|+||++.-... . +++.+.+..+ .++.+|+.+.|-.+.. +.+.+
T Consensus 58 ~~~~~~~~~~~~~~~DlVilavK~~~----~------------~~~l~~l~~~l~~~t~Iv~~~nGi~~~-----~~l~~ 116 (320)
T 3i83_A 58 PAAVVRSAAELETKPDCTLLCIKVVE----G------------ADRVGLLRDAVAPDTGIVLISNGIDIE-----PEVAA 116 (320)
T ss_dssp CSCEESCGGGCSSCCSEEEECCCCCT----T------------CCHHHHHTTSCCTTCEEEEECSSSSCS-----HHHHH
T ss_pred eeeeECCHHHcCCCCCEEEEecCCCC----h------------HHHHHHHHhhcCCCCEEEEeCCCCChH-----HHHHH
Confidence 34556788765569999999763321 1 1123334443 4677888889988732 22333
Q ss_pred cCCCCCCCEEEE-eec
Q 023853 98 VGTYDPKRLLGV-TML 112 (276)
Q Consensus 98 ~~~~~~~rviG~-t~l 112 (276)
. +|.++|++- +..
T Consensus 117 ~--~~~~~vl~g~~~~ 130 (320)
T 3i83_A 117 A--FPDNEVISGLAFI 130 (320)
T ss_dssp H--STTSCEEEEEEEE
T ss_pred H--CCCCcEEEEEEEe
Confidence 3 456677654 544
No 126
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=39.73 E-value=32 Score=27.41 Aligned_cols=47 Identities=17% Similarity=0.195 Sum_probs=34.1
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 28 ~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++.++|+||.++|....+.. ...|....+.+.+.+++.+ ..++++|
T Consensus 58 ~~~~~~d~vi~~ag~~~~~~~-----~~~n~~~~~~l~~a~~~~~--~~~v~~S 104 (224)
T 3h2s_A 58 ADLDSVDAVVDALSVPWGSGR-----GYLHLDFATHLVSLLRNSD--TLAVFIL 104 (224)
T ss_dssp HHHTTCSEEEECCCCCTTSSC-----THHHHHHHHHHHHTCTTCC--CEEEEEC
T ss_pred hhcccCCEEEECCccCCCcch-----hhHHHHHHHHHHHHHHHcC--CcEEEEe
Confidence 579999999999987532222 2458888888888888776 5555654
No 127
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=39.67 E-value=11 Score=32.97 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=18.8
Q ss_pred CCCHHhhcCCCcEEEEcCCCC
Q 023853 23 QQQLEDALTGMDIVIIPAGVP 43 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~ 43 (276)
|.|+++.++.|||||.+.|.|
T Consensus 194 t~~L~~~~~~ADIVI~Avg~p 214 (285)
T 3p2o_A 194 TKDLSLYTRQADLIIVAAGCV 214 (285)
T ss_dssp CSCHHHHHTTCSEEEECSSCT
T ss_pred chhHHHHhhcCCEEEECCCCC
Confidence 679999999999999998865
No 128
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=38.83 E-value=14 Score=32.17 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=27.8
Q ss_pred ccccccccCC-cccccce-ecCCCHHhhcCCCcEEEEcCCCCC
Q 023853 4 PLAQNKFDVD-SRAVRGF-LGQQQLEDALTGMDIVIIPAGVPR 44 (276)
Q Consensus 4 ~~~~~~~d~~-~~~~~~i-~~~~d~~~al~daDiVii~ag~~~ 44 (276)
|+++-+.... ...+.-. +.+.|+++.++.|||||.+.|.|.
T Consensus 173 p~A~lL~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~ 215 (281)
T 2c2x_A 173 PLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAH 215 (281)
T ss_dssp HHHHHHTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTT
T ss_pred HHHHHHhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCc
Confidence 5666665531 2333322 346799999999999999998663
No 129
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=38.78 E-value=31 Score=30.37 Aligned_cols=55 Identities=15% Similarity=0.058 Sum_probs=37.8
Q ss_pred HHhhcC--C-CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALT--G-MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~--d-aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++ + .|+||-+++..... .....+.+..|+.-...+.+.+.+.+.. .+|.+|
T Consensus 84 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~iv~~S 143 (397)
T 1gy8_A 84 LNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCD-KIIFSS 143 (397)
T ss_dssp HHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred HHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCC-EEEEEC
Confidence 445565 5 99999999864311 1245677888999999999998877543 444443
No 130
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=38.49 E-value=48 Score=29.64 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=17.2
Q ss_pred cCCCHHhhcCCCcEEEEcCC
Q 023853 22 GQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 22 ~~~d~~~al~daDiVii~ag 41 (276)
.++|+++++++||+||++..
T Consensus 72 ~~~~~~~a~~~aD~Vilav~ 91 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVP 91 (404)
T ss_dssp EESCHHHHHTTCSEEEECSC
T ss_pred EeCCHHHHhCCCCEEEEeCc
Confidence 67789888999999999864
No 131
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=37.91 E-value=89 Score=27.54 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=34.5
Q ss_pred CCCcEEEEcCCCC-----CCCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 31 TGMDIVIIPAGVP-----RKPGM---TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 31 ~daDiVii~ag~~-----~k~g~---~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
.+.|+|||.-|.. ..++. ...+....-..-++++++.+++..|++.|++++.|.
T Consensus 235 ~~Pd~VvI~lGtND~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ir~~~p~a~Iil~~pp~ 296 (366)
T 2w9x_A 235 WKPQVIVIGLGTNDFSTALNDNERWKTREALHADYVANYVKFVKQLHSNNARAQFILMNSDQ 296 (366)
T ss_dssp CCCSEEEEECCHHHHSSCCCTTSSCCSHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEESC
T ss_pred CCCCEEEEeCccCCCCCCCCCcccccccchHHHHHHHHHHHHHHHHHHHCCCCeEEEEeCCC
Confidence 4789999987742 12221 222222333455778899999999999887777443
No 132
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=37.55 E-value=55 Score=27.46 Aligned_cols=19 Identities=11% Similarity=0.232 Sum_probs=15.2
Q ss_pred CCCHHhhcC-CCcEEEEcCC
Q 023853 23 QQQLEDALT-GMDIVIIPAG 41 (276)
Q Consensus 23 ~~d~~~al~-daDiVii~ag 41 (276)
++|++++++ +||+||++..
T Consensus 52 ~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 52 TTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp ESCGGGGGGTCCSEEEECSC
T ss_pred cCCHHHHhcCCCCEEEEcCC
Confidence 457877888 9999999753
No 133
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=37.33 E-value=13 Score=32.62 Aligned_cols=21 Identities=33% Similarity=0.567 Sum_probs=18.8
Q ss_pred CCCHHhhcCCCcEEEEcCCCC
Q 023853 23 QQQLEDALTGMDIVIIPAGVP 43 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~ 43 (276)
|.|+++.+++|||||.+.|.|
T Consensus 195 t~~L~~~~~~ADIVI~Avg~p 215 (285)
T 3l07_A 195 TTDLKSHTTKADILIVAVGKP 215 (285)
T ss_dssp CSSHHHHHTTCSEEEECCCCT
T ss_pred chhHHHhcccCCEEEECCCCC
Confidence 679999999999999998865
No 134
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=37.13 E-value=24 Score=30.23 Aligned_cols=57 Identities=19% Similarity=0.074 Sum_probs=41.9
Q ss_pred CHHhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTG--MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~d--aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++++ .|+||-+++..... ..+..+.+..|+.-...+.+.+.+...++.+|.+|
T Consensus 64 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S 124 (347)
T 1orr_A 64 DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 124 (347)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 35567777 99999999864210 12456678899999999999999988666666665
No 135
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=36.77 E-value=31 Score=29.77 Aligned_cols=49 Identities=20% Similarity=0.187 Sum_probs=30.8
Q ss_pred eecCC--CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 20 FLGQQ--QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 20 i~~~~--d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
+..++ ++++++++||+||++...+. +.++.+.+....++.+++.++|-.
T Consensus 57 ~~~~~~~~~~~~~~~~D~vi~~v~~~~----------------~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 57 VEIFWPEQLEKCLENAEVVLLGVSTDG----------------VLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp EEEECGGGHHHHHTTCSEEEECSCGGG----------------HHHHHHHHTTTCCSCEEEECCCSE
T ss_pred eEEecHHhHHHHHhcCCEEEEcCChHH----------------HHHHHHHHhcCCCCCEEEEEcCcC
Confidence 34555 78778999999999864221 123333443334567788888766
No 136
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=36.64 E-value=25 Score=27.82 Aligned_cols=48 Identities=8% Similarity=0.084 Sum_probs=35.5
Q ss_pred CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 33 MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 33 aDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+|+||..+|.......+..+....|......+++.+.+.+.. .++.+|
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 113 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVS 113 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEEC
Confidence 899999998653323466778888999999999998887543 455554
No 137
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=36.40 E-value=10 Score=33.14 Aligned_cols=39 Identities=26% Similarity=0.326 Sum_probs=25.7
Q ss_pred ccccccccCCccccccee-cCCCHHhhcCCCcEEEEcCCCC
Q 023853 4 PLAQNKFDVDSRAVRGFL-GQQQLEDALTGMDIVIIPAGVP 43 (276)
Q Consensus 4 ~~~~~~~d~~~~~~~~i~-~~~d~~~al~daDiVii~ag~~ 43 (276)
|+++-+.... ..+.-.. -|.|+++.++.|||||.+.|.|
T Consensus 176 plA~lL~~~g-AtVtv~hs~T~~L~~~~~~ADIVI~Avg~p 215 (286)
T 4a5o_A 176 PMALELLLGG-CTVTVTHRFTRDLADHVSRADLVVVAAGKP 215 (286)
T ss_dssp HHHHHHHHTT-CEEEEECTTCSCHHHHHHTCSEEEECCCCT
T ss_pred HHHHHHHHCC-CeEEEEeCCCcCHHHHhccCCEEEECCCCC
Confidence 5555554422 2233222 2679999999999999998865
No 138
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=35.67 E-value=1.2e+02 Score=24.16 Aligned_cols=47 Identities=13% Similarity=0.194 Sum_probs=32.3
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 31 TGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 31 ~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
...|+|+|..|...- |.+.. .+. .-+++++..+++..|++.|++++-
T Consensus 93 ~~pd~vvi~~G~ND~-~~~~~-~~~---~~l~~~i~~l~~~~p~~~iil~~~ 139 (229)
T 1fxw_F 93 IKPKVIVVWVGTNNH-ENTAE-EVA---GGIEAIVQLINTRQPQAKIIVLGL 139 (229)
T ss_dssp CCCSEEEEECCTTCT-TSCHH-HHH---HHHHHHHHHHHHHCTTCEEEEECC
T ss_pred CCCCEEEEEEecCCC-CCCHH-HHH---HHHHHHHHHHHHHCCCCeEEEEeC
Confidence 367999998887643 43333 233 346778888888889987777753
No 139
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=35.34 E-value=14 Score=36.52 Aligned_cols=57 Identities=23% Similarity=0.281 Sum_probs=35.5
Q ss_pred hcCCCcEEEEcCCCCCCCCCCHH----HH--HHHHHHHHHHHHHHHHhhCCCcEE-EEecCCCC
Q 023853 29 ALTGMDIVIIPAGVPRKPGMTRD----DL--FNINAGIVKTLCEGIAKCCPKAIV-NLISNPVN 85 (276)
Q Consensus 29 al~daDiVii~ag~~~k~g~~r~----~~--~~~N~~i~~~i~~~i~~~~p~~~v-ivvtNP~d 85 (276)
+.++||+||+..|.+..+|.+|. ++ -......++.+++...+.+++.++ ++.++|.+
T Consensus 441 ~a~~aDvvIv~vg~~~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~~~~vVVVl~~g~P~~ 504 (721)
T 2x41_A 441 LAKKNDVAVIVISRISGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVE 504 (721)
T ss_dssp HHHHCSEEEEEEECCCBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHTTCCEEEEEECSSCCC
T ss_pred HHhcCCEEEEEEeccccccccccCCCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCCceE
Confidence 45899999998887655565554 22 222334445444333377777764 44689998
No 140
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=35.04 E-value=1.7e+02 Score=23.16 Aligned_cols=88 Identities=14% Similarity=0.264 Sum_probs=58.1
Q ss_pred hcCCCcEEEEcCCCCC-CCC----------CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHH
Q 023853 29 ALTGMDIVIIPAGVPR-KPG----------MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 97 (276)
Q Consensus 29 al~daDiVii~ag~~~-k~g----------~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~ 97 (276)
-+++|.|.++...... ++. .+...+.+.--.++++.++.|.+.+++ +++..-.+|- +..+++.+
T Consensus 24 ~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n--VVl~~k~I~d---~a~~~l~k 98 (178)
T 1gml_A 24 YIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD--VVITEKGISD---LAQHYLMR 98 (178)
T ss_dssp EEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS--EEEESSCBCH---HHHHHHHH
T ss_pred ccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc--EEEECCcccH---HHHHHHHH
Confidence 4789999999876532 221 235666677778999999999999888 4455566662 55555554
Q ss_pred cCCCCCCCEEEEeechHHHHHHHHHHHhCCC
Q 023853 98 VGTYDPKRLLGVTMLDVVRANTFVAEVLGLD 128 (276)
Q Consensus 98 ~~~~~~~rviG~t~lds~R~~~~la~~l~v~ 128 (276)
. .|+++-..+-.-+ ..||+.+|-.
T Consensus 99 ~------gI~~vr~v~~~dl-eria~atGa~ 122 (178)
T 1gml_A 99 A------NVTAIRRVRKTDN-NRIARACGAR 122 (178)
T ss_dssp T------TCEEECCCCHHHH-HHHHHHHCCC
T ss_pred C------CCEEEecCCHHHH-HHHHHHhCCe
Confidence 3 5777755545444 4478888753
No 141
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=34.85 E-value=65 Score=29.90 Aligned_cols=57 Identities=21% Similarity=0.179 Sum_probs=38.2
Q ss_pred CHHhhcCCCcEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRK---PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
...++++++|+||-+++.... ......+.+..|+.-.+.+++.+.+...-..+|.+|
T Consensus 194 ~~~~~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S 253 (516)
T 3oh8_A 194 PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS 253 (516)
T ss_dssp CCTTTTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred hhHHhcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 345688999999999886522 223466778889999999999854444333555554
No 142
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=34.07 E-value=1.1e+02 Score=23.89 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=15.3
Q ss_pred CCCcEEEEcCCCCCC-CCCCHHHH
Q 023853 31 TGMDIVIIPAGVPRK-PGMTRDDL 53 (276)
Q Consensus 31 ~daDiVii~ag~~~k-~g~~r~~~ 53 (276)
.++|+||+|+|.... .+.++..+
T Consensus 70 ~~~DlVittGG~g~g~~D~t~~a~ 93 (167)
T 1uuy_A 70 DEMDLILTLGGTGFTPRDVTPEAT 93 (167)
T ss_dssp SCCSEEEEESCCSSSTTCCHHHHH
T ss_pred CCCCEEEECCCCCCCCCCchHHHH
Confidence 479999999997543 34444433
No 143
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=34.02 E-value=1.2e+02 Score=23.53 Aligned_cols=48 Identities=13% Similarity=0.188 Sum_probs=31.1
Q ss_pred CCcEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 023853 32 GMDIVIIPAGVPR-KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83 (276)
Q Consensus 32 daDiVii~ag~~~-k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP 83 (276)
+.|+|++..|... ..+.+.. .+. .-++++...+++.+|++.|++++.|
T Consensus 85 ~pd~vvi~~G~ND~~~~~~~~-~~~---~~l~~~i~~l~~~~p~~~iil~~~~ 133 (214)
T 2hsj_A 85 AVDKIFLLIGTNDIGKDVPVN-EAL---NNLEAIIQSVARDYPLTEIKLLSIL 133 (214)
T ss_dssp CCCEEEEECCHHHHHTTCCHH-HHH---HHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCEEEEEEecCcCCcCCCHH-HHH---HHHHHHHHHHHHhCCCCeEEEEecC
Confidence 5799999887431 1122322 233 3467788888888999988777643
No 144
>2i9x_A Putative septation protein spovg; APC86317.1, staphylococcus epidermidis ATCC 12228, ST genomics, PSI-2, protein structure initiative; 1.80A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=33.97 E-value=68 Score=22.73 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=31.0
Q ss_pred eecCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 023853 217 YVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAK 260 (276)
Q Consensus 217 ~~~~~y~~~~~~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa 260 (276)
+++|+ .+.|+++|-.=.++|..+=+-- |+|.+-+++|+++.
T Consensus 39 Vieg~--~GlFVaMPs~k~~~g~y~Di~h-Pit~e~Re~i~~aV 79 (87)
T 2i9x_A 39 VIEGN--SGLFVAMPSKRTPDGEFRDIAH-PINSDMRQEIQDAV 79 (87)
T ss_dssp EEEET--TEEEEECCEEECTTSCEEECEE-ECSHHHHHHHHHHH
T ss_pred EEECC--CceEEECCCcCCCCCCEEEEEE-ECCHHHHHHHHHHH
Confidence 34443 4789999999888888774443 69999999998764
No 145
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=33.05 E-value=85 Score=24.22 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=33.7
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||..+|........ ..|......+.+.+.+.+.+ .++.+|
T Consensus 60 ~~~~~~~~~d~vi~~a~~~~~~~~~-----~~n~~~~~~~~~~~~~~~~~-~~v~~S 110 (206)
T 1hdo_A 60 DVDKTVAGQDAVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHGVD-KVVACT 110 (206)
T ss_dssp HHHHHHTTCSEEEECCCCTTCCSCC-----CHHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred HHHHHHcCCCEEEECccCCCCCCcc-----chHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence 4667889999999998864321111 25667777788888777543 455554
No 146
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=32.41 E-value=58 Score=27.63 Aligned_cols=48 Identities=6% Similarity=-0.025 Sum_probs=30.3
Q ss_pred ecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCC
Q 023853 21 LGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVN 85 (276)
Q Consensus 21 ~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~d 85 (276)
..+++.+ +.+++|+||++...+. ++++.+.+..+ .++.+|+.++|-.+
T Consensus 73 ~~~~~~~-~~~~~D~vil~vk~~~----------------~~~v~~~i~~~l~~~~~iv~~~nG~~ 121 (317)
T 2qyt_A 73 CVTDNPA-EVGTVDYILFCTKDYD----------------MERGVAEIRPMIGQNTKILPLLNGAD 121 (317)
T ss_dssp EEESCHH-HHCCEEEEEECCSSSC----------------HHHHHHHHGGGEEEEEEEEECSCSSS
T ss_pred eEecCcc-ccCCCCEEEEecCccc----------------HHHHHHHHHhhcCCCCEEEEccCCCC
Confidence 3345664 6899999999864332 13344455544 35667777888876
No 147
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=32.31 E-value=12 Score=32.73 Aligned_cols=40 Identities=15% Similarity=0.241 Sum_probs=26.4
Q ss_pred ccccccccCCcccccce-ecCCCHHhhcCCCcEEEEcCCCCC
Q 023853 4 PLAQNKFDVDSRAVRGF-LGQQQLEDALTGMDIVIIPAGVPR 44 (276)
Q Consensus 4 ~~~~~~~d~~~~~~~~i-~~~~d~~~al~daDiVii~ag~~~ 44 (276)
|+++-+.... ..+.-. +.|.|+++.+++|||||.+.|.|.
T Consensus 174 p~A~lL~~~g-AtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~ 214 (288)
T 1b0a_A 174 PMSMELLLAG-CTTTVTHRFTKNLRHHVENADLLIVAVGKPG 214 (288)
T ss_dssp HHHHHHHTTT-CEEEEECSSCSCHHHHHHHCSEEEECSCCTT
T ss_pred HHHHHHHHCC-CeEEEEeCCchhHHHHhccCCEEEECCCCcC
Confidence 4555554422 223322 346799999999999999998663
No 148
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=32.15 E-value=38 Score=29.85 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=18.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
.+..+.|+++++++||+||++.
T Consensus 72 ~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 72 NITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp TEEEESCHHHHHTTCSSEEECC
T ss_pred ceeeeCCHHHHHcCCCEEEECC
Confidence 3566788988899999999975
No 149
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=31.90 E-value=33 Score=30.52 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=18.4
Q ss_pred ceecCCCHHhhcCCCcEEEEc
Q 023853 19 GFLGQQQLEDALTGMDIVIIP 39 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ 39 (276)
++..+.|+++++++||+|...
T Consensus 221 ~v~~~~d~~eav~~aDvvytd 241 (328)
T 3grf_A 221 SIKIFHDCKKGCEGVDVVYTD 241 (328)
T ss_dssp EEEEESSHHHHHTTCSEEEEC
T ss_pred eEEEEcCHHHHhcCCCEEEec
Confidence 367889999999999999885
No 150
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=31.59 E-value=74 Score=24.97 Aligned_cols=47 Identities=9% Similarity=0.145 Sum_probs=32.8
Q ss_pred hhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 28 ~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
+++.++|+||.++|.+... ...|....+.+.+.+++.+ ...++++|.
T Consensus 57 ~~~~~~d~vi~~ag~~~~~-------~~~~~~~~~~l~~a~~~~~-~~~~v~~SS 103 (221)
T 3ew7_A 57 SDLSDQNVVVDAYGISPDE-------AEKHVTSLDHLISVLNGTV-SPRLLVVGG 103 (221)
T ss_dssp HHHTTCSEEEECCCSSTTT-------TTSHHHHHHHHHHHHCSCC-SSEEEEECC
T ss_pred hhhcCCCEEEECCcCCccc-------cchHHHHHHHHHHHHHhcC-CceEEEEec
Confidence 5899999999999875421 2347777788888887764 345555553
No 151
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=31.49 E-value=24 Score=28.28 Aligned_cols=51 Identities=24% Similarity=0.275 Sum_probs=34.2
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
+++++++++|+||.++|..... .+..|......+.+.+++.+. ..+|.+|.
T Consensus 56 ~~~~~~~~~d~vi~~ag~~~~~------~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS 106 (219)
T 3dqp_A 56 EMAKQLHGMDAIINVSGSGGKS------LLKVDLYGAVKLMQAAEKAEV-KRFILLST 106 (219)
T ss_dssp HHHTTTTTCSEEEECCCCTTSS------CCCCCCHHHHHHHHHHHHTTC-CEEEEECC
T ss_pred HHHHHHcCCCEEEECCcCCCCC------cEeEeHHHHHHHHHHHHHhCC-CEEEEECc
Confidence 4667899999999999865421 344566666677777777653 35555553
No 152
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=30.78 E-value=35 Score=28.89 Aligned_cols=55 Identities=16% Similarity=-0.071 Sum_probs=36.9
Q ss_pred HHhhcC--CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALT--GMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~--daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++ ++|+|+..++..... ..+....+..|+.-...+.+.+.+.+. ..+|.+|
T Consensus 58 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~iv~~S 116 (311)
T 2p5y_A 58 VERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGV-EKLVFAS 116 (311)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-SEEEEEE
T ss_pred HHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CEEEEeC
Confidence 445666 899999988754210 123456778898888889998887654 3455544
No 153
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=30.22 E-value=34 Score=28.53 Aligned_cols=55 Identities=20% Similarity=0.136 Sum_probs=40.4
Q ss_pred CHHhhcC--CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALT--GMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~--daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ ++|+||-+++..... .....+.+..|+.-...+.+.+.+.+. .+|.+|
T Consensus 47 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S 105 (287)
T 3sc6_A 47 QVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA--KLVYIS 105 (287)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred HHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 4555666 699999998865321 146778889999999999999998865 455554
No 154
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=30.00 E-value=57 Score=28.41 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=34.2
Q ss_pred CCCcEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 31 TGMDIVIIPAGVPR-KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 31 ~daDiVii~ag~~~-k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
...|+|+|..|... ..+....+.+. .-+++++..+++..|++.|++++.|..
T Consensus 212 ~~PdlVvI~lGtND~~~~~~~~~~~~---~~l~~li~~ir~~~p~a~Iil~~pp~~ 264 (341)
T 2wao_A 212 YVPQVVVINLGTNDFSTSFADKTKFV---TAYKNLISEVRRNYPDAHIFCCVGPML 264 (341)
T ss_dssp CCCSEEEEECCHHHHSSSCCCHHHHH---HHHHHHHHHHHHHCTTCEEEEEECSSC
T ss_pred CCCCEEEEeCccccCCCCCCCHHHHH---HHHHHHHHHHHHHCCCCeEEEEeCCCc
Confidence 46799999887531 11112223333 346778888988899998888886654
No 155
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=29.66 E-value=82 Score=26.81 Aligned_cols=47 Identities=17% Similarity=0.238 Sum_probs=29.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLIS 81 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvt 81 (276)
++..+++++++++ ||+||++...+ ..++++.+.+..+- ++.+++..|
T Consensus 58 g~~~~~~~~~~~~-aDvvi~~vp~~---------------~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 58 GATLADSVADVAA-ADLIHITVLDD---------------AQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp TCEECSSHHHHTT-SSEEEECCSSH---------------HHHHHHHHHHHTTCCTTCEEEECS
T ss_pred CCEEcCCHHHHHh-CCEEEEECCCh---------------HHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3566789998888 99999975422 12344445565554 445555554
No 156
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=29.52 E-value=38 Score=29.89 Aligned_cols=41 Identities=29% Similarity=0.385 Sum_probs=26.5
Q ss_pred cceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA 69 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~ 69 (276)
.++..++|=.||.++||++|+---. | ..+..|++++++.|.
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPf----G-------~~t~~Iakkii~~lp 167 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPK----G-------NKQPDIIKKFADAIP 167 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTT----C-------TTHHHHHHHHGGGSC
T ss_pred cCcEeecchHHHhcCCCEEEEecCC----C-------CCcHHHHHHHHhhCc
Confidence 3466666666799999999983211 1 235677777766654
No 157
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=29.42 E-value=69 Score=26.80 Aligned_cols=66 Identities=26% Similarity=0.274 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHcCCCCCCCEEEEe-ec---hHHHHHHHHHHHhCCC
Q 023853 59 GIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGVT-ML---DVVRANTFVAEVLGLD 128 (276)
Q Consensus 59 ~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~t-~l---ds~R~~~~la~~l~v~ 128 (276)
.+.+.+...|++++.+.+++-+|-=.|++ ++.+++.++.| +.+|++++ .. ++...-..+|+.+|++
T Consensus 8 ~~~~~l~~~i~~~~~~~vvv~lSGGiDSs--~~~~l~~~~~g--~~~v~av~~~~~~~~~~~~a~~~a~~lgi~ 77 (257)
T 2e18_A 8 KVIERILEFIREKGNNGVVIGISGGVDSA--TVAYLATKALG--KEKVLGLIMPYFENKDVEDAKLVAEKLGIG 77 (257)
T ss_dssp HHHHHHHHHHHHHCTTCEEEECCSSHHHH--HHHHHHHHHHC--GGGEEEEECCSSCSTHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHhCCCcEEEEecCCHHHH--HHHHHHHHhcC--CCcEEEEEeCCCCchHHHHHHHHHHHhCCC
Confidence 34566777777776667888888888865 44455566543 35788874 21 4555667788999874
No 158
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=29.32 E-value=42 Score=26.95 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=31.6
Q ss_pred CCCcEEEEcCCCC-----CCCCCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 31 TGMDIVIIPAGVP-----RKPGMT---RDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 31 ~daDiVii~ag~~-----~k~g~~---r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
.+.|+|+|..|.. ..+++. ..+.+.. -++++++.+++..|++.|++++.|.
T Consensus 81 ~~pd~Vii~~G~ND~~~~~~~~~~~~~~~~~f~~---~l~~li~~l~~~~P~~~iil~~p~~ 139 (232)
T 3dc7_A 81 EDADFIAVFGGVNDYGRDQPLGQYGDCDMTTFYG---ALMMLLTGLQTNWPTVPKLFISAIH 139 (232)
T ss_dssp TTCSEEEEECCHHHHHTTCCCCCTTCCSTTSHHH---HHHHHHHHHHHHCTTSCEEEEECCC
T ss_pred CCCCEEEEEEeccccccCcCCccccccchHHHHH---HHHHHHHHHHHhCCCCeEEEEeCcc
Confidence 4789999987742 111211 1122232 3567788888889999877777544
No 159
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.15 E-value=29 Score=30.27 Aligned_cols=48 Identities=17% Similarity=0.244 Sum_probs=31.7
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
.+..+.|+++ +++||+||++-... .++++.+.+.. ++.++|.++|..+
T Consensus 68 ~~~~~~~~~~-~~~aDvVil~vk~~----------------~~~~v~~~l~~--~~~~vv~~~nGi~ 115 (335)
T 1z82_A 68 TVRATNDLEE-IKKEDILVIAIPVQ----------------YIREHLLRLPV--KPSMVLNLSKGIE 115 (335)
T ss_dssp CSEEESCGGG-CCTTEEEEECSCGG----------------GHHHHHTTCSS--CCSEEEECCCCCC
T ss_pred eEEEeCCHHH-hcCCCEEEEECCHH----------------HHHHHHHHhCc--CCCEEEEEeCCCC
Confidence 3566778887 99999999975311 13333333433 6778888888655
No 160
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=28.96 E-value=35 Score=28.26 Aligned_cols=21 Identities=14% Similarity=0.267 Sum_probs=15.5
Q ss_pred eecCCCHHhhcCCCcEEEEcC
Q 023853 20 FLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~a 40 (276)
+..+.|.++++++||+||++.
T Consensus 51 ~~~~~~~~e~~~~aDvVilav 71 (247)
T 3gt0_A 51 LTTTTDNNEVAKNADILILSI 71 (247)
T ss_dssp CEECSCHHHHHHHCSEEEECS
T ss_pred CEEeCChHHHHHhCCEEEEEe
Confidence 445667777788888888866
No 161
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=28.85 E-value=28 Score=30.76 Aligned_cols=22 Identities=14% Similarity=0.371 Sum_probs=18.9
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|+++++++||+|....
T Consensus 208 ~~~~~~d~~eav~~aDvvyt~~ 229 (310)
T 3csu_A 208 AWSLHSSIEEVMAEVDILYMTR 229 (310)
T ss_dssp CEEECSCGGGTTTTCSEEEECC
T ss_pred eEEEEcCHHHHhcCCCEEEECC
Confidence 4778899999999999988864
No 162
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=28.82 E-value=13 Score=32.38 Aligned_cols=21 Identities=19% Similarity=0.452 Sum_probs=19.0
Q ss_pred CCCHHhhcCCCcEEEEcCCCC
Q 023853 23 QQQLEDALTGMDIVIIPAGVP 43 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~ 43 (276)
+.|+++.++.|||||.+.|.|
T Consensus 184 t~~L~~~~~~ADIVI~Avg~p 204 (276)
T 3ngx_A 184 TKDIGSMTRSSKIVVVAVGRP 204 (276)
T ss_dssp CSCHHHHHHHSSEEEECSSCT
T ss_pred cccHHHhhccCCEEEECCCCC
Confidence 679999999999999998865
No 163
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=28.76 E-value=67 Score=27.09 Aligned_cols=56 Identities=9% Similarity=0.086 Sum_probs=39.6
Q ss_pred HHhhcCC--CcEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALTG--MDIVIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~d--aDiVii~ag~~~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ .|+||-+++.... ...+..+.+..|+.-...+.+.+.+.+..+.+|.+|
T Consensus 66 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 125 (321)
T 2pk3_A 66 VKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 125 (321)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEE
T ss_pred HHHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEc
Confidence 4455665 8999999886431 123567788899999999999997764445666664
No 164
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=28.62 E-value=25 Score=31.24 Aligned_cols=22 Identities=14% Similarity=0.028 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|++++++|||+|...-
T Consensus 212 ~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 212 EVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEECCHHHHhcCCCEEEEec
Confidence 4778899999999999988863
No 165
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=28.49 E-value=97 Score=25.78 Aligned_cols=43 Identities=19% Similarity=0.238 Sum_probs=26.7
Q ss_pred CCCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 023853 23 QQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISN 82 (276)
Q Consensus 23 ~~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtN 82 (276)
+.|++++ ++||+||++... ..++++.+.+..+- ++.+++.++|
T Consensus 49 ~~~~~~~-~~~D~vi~av~~----------------~~~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 49 GQDLSLL-QTAKIIFLCTPI----------------QLILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp ESCGGGG-TTCSEEEECSCH----------------HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred cCCHHHh-CCCCEEEEECCH----------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence 5677777 999999997631 12344555565553 5666666644
No 166
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=28.33 E-value=48 Score=28.23 Aligned_cols=56 Identities=14% Similarity=-0.082 Sum_probs=39.0
Q ss_pred HHhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALTG--MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~d--aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ .|+||.++|..... ..+..+.+..|+.-...+.+.+.+.+..+.+|.+|
T Consensus 67 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~S 126 (345)
T 2z1m_A 67 IIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAS 126 (345)
T ss_dssp HHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 4455665 49999999864311 23567778889998999999988876445566554
No 167
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=28.18 E-value=53 Score=27.93 Aligned_cols=23 Identities=30% Similarity=0.384 Sum_probs=18.6
Q ss_pred ceecCCCHHhhcCCCcEEEEcCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag 41 (276)
++..++++++++++||+||++..
T Consensus 46 g~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 46 GASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp TCEECSSHHHHHTTCSEEEECCS
T ss_pred CCeEcCCHHHHHhCCCeEEEECC
Confidence 35567889889999999999753
No 168
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=28.10 E-value=32 Score=30.35 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=18.8
Q ss_pred ceecCCCHHhhcCCCcEEEEc
Q 023853 19 GFLGQQQLEDALTGMDIVIIP 39 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ 39 (276)
++..+.|+++++++||+|...
T Consensus 203 ~v~~~~d~~eav~~aDvvyt~ 223 (309)
T 4f2g_A 203 FYQVFDDPNEACKGADLVTTD 223 (309)
T ss_dssp GEEECSSHHHHTTTCSEEEEC
T ss_pred eEEEEcCHHHHhcCCCEEEec
Confidence 577899999999999999885
No 169
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=27.76 E-value=45 Score=27.79 Aligned_cols=56 Identities=13% Similarity=-0.034 Sum_probs=40.2
Q ss_pred CHHhhcCC--CcEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTG--MDIVIIPAGVPRK---PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~d--aDiVii~ag~~~k---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++++ +|+||-+++.... ......+.+..|+.-...+.+.+++.+.+ .+|.+|
T Consensus 52 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~v~~S 112 (319)
T 4b8w_A 52 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGAR-KVVSCL 112 (319)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred HHHHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEc
Confidence 35566776 9999999886421 12456778899999999999999888644 344443
No 170
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=27.35 E-value=40 Score=28.58 Aligned_cols=23 Identities=4% Similarity=-0.022 Sum_probs=18.7
Q ss_pred ceecCCCHHhhcCCCcEEEEcCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag 41 (276)
++..++++++++++||+||++..
T Consensus 44 g~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 44 GAERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp TCEECSSHHHHHHHCSEEEECCS
T ss_pred CCeecCCHHHHHhcCCEEEEEcC
Confidence 35667889999999999999753
No 171
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=27.24 E-value=25 Score=30.77 Aligned_cols=55 Identities=9% Similarity=0.097 Sum_probs=39.9
Q ss_pred HHhhcCCCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 26 LEDALTGMDIVIIPAGVPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 26 ~~~al~daDiVii~ag~~~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
++++++++|+||-+++...... .+..+.+..|+.....+.+.+.+.+ ..+|.+|.
T Consensus 85 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS 141 (372)
T 3slg_A 85 VEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 141 (372)
T ss_dssp HHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECC
T ss_pred HHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCc
Confidence 5567889999999888643211 2456677888888889999998887 55666653
No 172
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=27.15 E-value=26 Score=30.90 Aligned_cols=22 Identities=18% Similarity=0.437 Sum_probs=18.6
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|+++++++||+|..+-
T Consensus 205 ~~~~~~d~~eav~~aDvvy~~~ 226 (306)
T 4ekn_B 205 KFYEKESLDDLDDDIDVLYVTR 226 (306)
T ss_dssp CEEEESCGGGCCTTCSEEEECC
T ss_pred EEEEEcCHHHHhcCCCEEEeCC
Confidence 4667899999999999998864
No 173
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=26.81 E-value=35 Score=30.03 Aligned_cols=40 Identities=18% Similarity=0.327 Sum_probs=27.0
Q ss_pred ccccccccCCcccccce-ecCCCHHhhcCCCcEEEEcCCCCC
Q 023853 4 PLAQNKFDVDSRAVRGF-LGQQQLEDALTGMDIVIIPAGVPR 44 (276)
Q Consensus 4 ~~~~~~~d~~~~~~~~i-~~~~d~~~al~daDiVii~ag~~~ 44 (276)
|+++-+.... ..|.-. +.+.|+++.++.|||||.+.|.|.
T Consensus 180 p~A~lL~~~g-AtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~ 220 (301)
T 1a4i_A 180 PMHDLLLWNN-ATVTTCHSKTAHLDEEVNKGDILVVATGQPE 220 (301)
T ss_dssp HHHHHHHHTT-CEEEEECTTCSSHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHHhCC-CeEEEEECCcccHHHHhccCCEEEECCCCcc
Confidence 4555555432 233322 247799999999999999998763
No 174
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=26.50 E-value=39 Score=30.23 Aligned_cols=19 Identities=21% Similarity=0.419 Sum_probs=16.8
Q ss_pred ceecCCCHHhhcCCCcEEEE
Q 023853 19 GFLGQQQLEDALTGMDIVII 38 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii 38 (276)
++..+.|++ +++|||+|..
T Consensus 230 ~v~~~~d~~-av~~aDvvyt 248 (339)
T 4a8t_A 230 SFLVTDDAS-SVEGADFLYT 248 (339)
T ss_dssp EEEEECCGG-GGTTCSEEEE
T ss_pred EEEEECChh-HHcCCCEEEe
Confidence 477889999 9999999996
No 175
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=26.45 E-value=29 Score=31.09 Aligned_cols=22 Identities=14% Similarity=0.012 Sum_probs=18.8
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|+++++++||+|....
T Consensus 234 ~v~~~~d~~eav~~aDVvyt~~ 255 (340)
T 4ep1_A 234 EIEILHNPELAVNEADFIYTDV 255 (340)
T ss_dssp CEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEECCHHHHhCCCCEEEecC
Confidence 4778899999999999988853
No 176
>1bb1_B Designed, thermostable heterotrimeric coiled coil; de novo protein design; 1.80A {Synthetic construct} SCOP: k.7.1.1
Probab=26.44 E-value=93 Score=17.51 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 023853 250 EYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 250 ~~E~~~l~~sa~~i~~~~~~~ 270 (276)
.+|++.+++-.+.|++++...
T Consensus 8 keeqaaieeeiqaikeeiaai 28 (36)
T 1bb1_B 8 KEEQAAIEEEIQAIKEEIAAI 28 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999887543
No 177
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=26.41 E-value=1.4e+02 Score=22.17 Aligned_cols=49 Identities=20% Similarity=0.190 Sum_probs=30.8
Q ss_pred HhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 27 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 27 ~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
...++++|.+|+...... +. ...-++.+...+.+..++.-++++.|=.|
T Consensus 76 ~~~~~~~d~~i~v~d~~~-----~~-----s~~~~~~~~~~~~~~~~~~p~ilv~nK~D 124 (181)
T 3tw8_B 76 STYYRGTHGVIVVYDVTS-----AE-----SFVNVKRWLHEINQNCDDVCRILVGNKND 124 (181)
T ss_dssp GGGGTTCSEEEEEEETTC-----HH-----HHHHHHHHHHHHHHHCTTSEEEEEEECTT
T ss_pred HHHhccCCEEEEEEECCC-----HH-----HHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 346889999988754332 21 11223445556666777777778888899
No 178
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=26.36 E-value=94 Score=26.46 Aligned_cols=54 Identities=17% Similarity=0.081 Sum_probs=37.7
Q ss_pred HHhhcC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 26 LEDALT--GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 26 ~~~al~--daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++ ++|+||.++|..........+ +..|+.-...+++.+.+.+. +.+|.+|
T Consensus 80 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~-~~iV~~S 135 (330)
T 2pzm_A 80 LERAFDSFKPTHVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGV-KRLLNFQ 135 (330)
T ss_dssp HHHHHHHHCCSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTC-SEEEEEE
T ss_pred HHHHHhhcCCCEEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCC-CEEEEec
Confidence 556677 999999999865322222334 78899989999999887753 4555554
No 179
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=26.36 E-value=45 Score=26.27 Aligned_cols=17 Identities=18% Similarity=0.339 Sum_probs=13.5
Q ss_pred hhcC--CCcEEEEcCCCCC
Q 023853 28 DALT--GMDIVIIPAGVPR 44 (276)
Q Consensus 28 ~al~--daDiVii~ag~~~ 44 (276)
++++ ++|+||+|+|...
T Consensus 66 ~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 66 AGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp HHHTCTTCSEEEEECCCSS
T ss_pred HHHhcCCCCEEEEcCCCCC
Confidence 3566 8999999999754
No 180
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=26.26 E-value=66 Score=27.84 Aligned_cols=23 Identities=26% Similarity=0.182 Sum_probs=18.6
Q ss_pred ceecCCCHHhhcCCCcEEEEcCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag 41 (276)
++..+.++++++++||+||++..
T Consensus 74 g~~~~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 74 GATIHEQARAAARDADIVVSMLE 96 (320)
T ss_dssp TCEEESSHHHHHTTCSEEEECCS
T ss_pred CCEeeCCHHHHHhcCCEEEEECC
Confidence 35567889999999999999763
No 181
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.22 E-value=46 Score=28.64 Aligned_cols=22 Identities=14% Similarity=-0.047 Sum_probs=17.7
Q ss_pred eecCCCHHhhcCCCcEEEEcCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag 41 (276)
+....++++++++||+||++..
T Consensus 53 ~~~~~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 53 AHLCESVKAALSASPATIFVLL 74 (306)
T ss_dssp CEECSSHHHHHHHSSEEEECCS
T ss_pred CeecCCHHHHHhcCCEEEEEeC
Confidence 4557788889999999999753
No 182
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=26.04 E-value=30 Score=30.49 Aligned_cols=22 Identities=14% Similarity=0.232 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|+++++++||+|....
T Consensus 204 ~~~~~~d~~eav~~aDvvy~~~ 225 (307)
T 2i6u_A 204 SVTVTADAHAAAAGADVLVTDT 225 (307)
T ss_dssp CEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEEECHHHHhcCCCEEEecc
Confidence 4777999999999999998853
No 183
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=26.02 E-value=20 Score=35.48 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=49.8
Q ss_pred hcCCCcEEEEcCCCCCCCCC--------CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCCcHHHHHHHHHHcC
Q 023853 29 ALTGMDIVIIPAGVPRKPGM--------TRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVNSTVPIAAEVFKKVG 99 (276)
Q Consensus 29 al~daDiVii~ag~~~k~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivv-tNP~d~~~~v~t~~~~~~~ 99 (276)
+.++||++|+..|....+|. +|.++-.-. -=.++.+.+.+.+++.++++. ++|++ +-. |.
T Consensus 424 ~A~~aDv~Iv~vg~~~gEg~~~~~g~~gDR~~l~Lp~--~Q~~Li~~v~~~~~~~VVVl~sG~p~~----~~~---w~-- 492 (713)
T 3zyz_A 424 AARGKDVAIVFITADSGEGYITVEGNAGDRNNLDPWH--NGNALVQAVAGANSNVIVVVHSVGAII----LEQ---IL-- 492 (713)
T ss_dssp HHTTCSEEEEEEEECCBCTTCCBTTBCSSCSCSSCST--THHHHHHHHHHHCSCEEEEEEESSCCC----CHH---HH--
T ss_pred HhhcCCEEEEEecccCCCCccccccCCCCcccccCCh--hHHHHHHHHHHhCCCeEEEEecCCccc----chh---hh--
Confidence 46899999997765433333 453321100 013566777778888766554 79998 322 11
Q ss_pred CCCCCCEEEE--eechHHHHHHHHHHHh--CCCCCC
Q 023853 100 TYDPKRLLGV--TMLDVVRANTFVAEVL--GLDPRE 131 (276)
Q Consensus 100 ~~~~~rviG~--t~lds~R~~~~la~~l--~v~~~~ 131 (276)
+..++=++ +.+....--..||+.| .++|+.
T Consensus 493 --~~~~v~Ail~aw~pGqegG~AiAdvL~G~~nPSG 526 (713)
T 3zyz_A 493 --ALPQVKAVVWAGLPSQESGNALVDVLWGDVSPSG 526 (713)
T ss_dssp --TCTTEEEEEECCCCGGGHHHHHHHHHTTSSCCCC
T ss_pred --hccccCEEEEcCCCCchhhheehhhhcCCcCCCc
Confidence 11245555 4455545556677775 245543
No 184
>2ia9_A Putative septation protein spovg; APC85465, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2; 3.00A {Bacillus subtilis} SCOP: d.366.1.1
Probab=25.85 E-value=1.1e+02 Score=22.31 Aligned_cols=41 Identities=17% Similarity=0.158 Sum_probs=31.1
Q ss_pred eecCCCCCccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 023853 217 YVASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAK 260 (276)
Q Consensus 217 ~~~~~y~~~~~~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa 260 (276)
+++|+ .+.|+++|-.=.++|..+=+-- |+|.+-++.|+.+.
T Consensus 39 Vieg~--~GlFVaMPSrk~~~Gey~DI~h-Pit~e~Re~i~~aV 79 (100)
T 2ia9_A 39 VIDGN--NGLFVAMPSKRTPDGEFRDITH-PINSSTRGKIQDAV 79 (100)
T ss_dssp EEEET--TEEEEECCEEECTTSCEEESEE-ESSHHHHHHHHHHH
T ss_pred EEECC--CceEEECCCcCCCCCCEEEEEE-ECCHHHHHHHHHHH
Confidence 34443 4789999999888987773343 69999999998765
No 185
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=25.77 E-value=1.4e+02 Score=22.10 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=31.4
Q ss_pred HHHHHHHHHhhC---CCcEEEEecCCCCCcHHHHHHHHHHcCCCCCCCEEEE
Q 023853 61 VKTLCEGIAKCC---PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 109 (276)
Q Consensus 61 ~~~i~~~i~~~~---p~~~vivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~ 109 (276)
.+-+.+.+.+.+ .+.+++.++.|... .... ....|+|++|++=+
T Consensus 17 ~~lLlp~L~~l~~~~~~r~ilwi~pp~~~----~~~~-L~~~Gl~~~rll~v 63 (119)
T 1ofu_X 17 LTLLAPILRELSEEQDARWLTLIAPPASL----THEW-LRRAGLNRERILLL 63 (119)
T ss_dssp HHHHHHHHHHHTTCSSSSEEEEESCCTTS----CHHH-HHHTTCCTTSEEEE
T ss_pred HHHHHHHHHHhcccccCccEEEECCCCCC----CHHH-HHHcCCChHHEEEE
Confidence 445667777776 57899888877763 3333 34569999999999
No 186
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=25.58 E-value=25 Score=29.66 Aligned_cols=56 Identities=11% Similarity=-0.002 Sum_probs=38.5
Q ss_pred CHHhhcC--CCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALT--GMDIVIIPAGVPRKP-GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~--daDiVii~ag~~~k~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ ++|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+.+ .+|.+|
T Consensus 59 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 117 (312)
T 2yy7_A 59 QIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIK-KIFWPS 117 (312)
T ss_dssp HHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCS-EEECCE
T ss_pred HHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence 3455676 899999998854211 1345677888999999999998876532 455444
No 187
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=25.56 E-value=45 Score=28.45 Aligned_cols=55 Identities=11% Similarity=0.042 Sum_probs=38.5
Q ss_pred HHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 26 LEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 26 ~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
++++++++|+||-+++..... ..+..+.+..|+.....+.+.+.+.+ ..+|.+|.
T Consensus 61 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS 117 (345)
T 2bll_A 61 IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPST 117 (345)
T ss_dssp HHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECC
T ss_pred HHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence 556778999999998854311 12455677788888888888888765 56666653
No 188
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=25.54 E-value=29 Score=30.62 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=18.8
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|++++++|||+|..+.
T Consensus 208 ~~~~~~d~~eav~~aDvvyt~~ 229 (308)
T 1ml4_A 208 KVVETTTLEDVIGKLDVLYVTR 229 (308)
T ss_dssp CEEEESCTHHHHTTCSEEEECC
T ss_pred eEEEEcCHHHHhcCCCEEEECC
Confidence 4677899999999999988864
No 189
>2i9z_A Putative septation protein spovg; APC86317, staphylococcus epidermidis ATCC 12228, STRU genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus epidermidis} SCOP: d.366.1.1
Probab=25.37 E-value=1.1e+02 Score=22.49 Aligned_cols=36 Identities=19% Similarity=0.116 Sum_probs=28.9
Q ss_pred CccEEEEeEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 023853 224 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAK 260 (276)
Q Consensus 224 ~~~~~s~Pv~ig~~Gv~~i~~~~~L~~~E~~~l~~sa 260 (276)
.+.|+++|-+=.++|..+=+-- |++.+-+++|+.+.
T Consensus 44 ~GlFVaMPSrk~~~GeyrDI~h-PIt~e~Re~i~~aV 79 (105)
T 2i9z_A 44 SGLFVAMPSKRTPDGEFRDIAH-PINSDMRQEIQDAV 79 (105)
T ss_dssp TEEEEECCEEECTTSCEEECEE-ESSHHHHHHHHHHH
T ss_pred CceEEECCCcCCCCCCEEEEEE-ECCHHHHHHHHHHH
Confidence 4789999999888888774443 69999999998764
No 190
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=25.35 E-value=33 Score=30.62 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|+++++++||+|....
T Consensus 211 ~v~~~~d~~eav~~aDvvytd~ 232 (335)
T 1dxh_A 211 KLTLTEDPKEAVKGVDFVHTDV 232 (335)
T ss_dssp EEEEESCHHHHTTTCSEEEECC
T ss_pred eEEEEeCHHHHhCCCCEEEeCC
Confidence 4778999999999999988854
No 191
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=25.20 E-value=33 Score=30.89 Aligned_cols=21 Identities=14% Similarity=0.215 Sum_probs=18.4
Q ss_pred ceecCCCHHhhcCCCcEEEEc
Q 023853 19 GFLGQQQLEDALTGMDIVIIP 39 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ 39 (276)
++..+.|+++++++||+|...
T Consensus 245 ~~~~~~d~~eav~~aDVvytd 265 (353)
T 3sds_A 245 NLTQTTVPEVAVKDADVIVTD 265 (353)
T ss_dssp CEEEESCHHHHTTTCSEEEEC
T ss_pred eEEEECCHHHHhcCCCEEEeC
Confidence 577889999999999999864
No 192
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=25.18 E-value=30 Score=30.72 Aligned_cols=23 Identities=13% Similarity=0.089 Sum_probs=19.6
Q ss_pred cceecCCCHHhhcCCCcEEEEcC
Q 023853 18 RGFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 18 ~~i~~~~d~~~al~daDiVii~a 40 (276)
.++..+.|+++|+++||+|....
T Consensus 215 ~~~~~~~d~~eav~~aDvvy~~~ 237 (324)
T 1js1_X 215 GNARVEYDQMKAFEGADFIYAKN 237 (324)
T ss_dssp TTCEEESCHHHHHTTCSEEEECC
T ss_pred cceEEECCHHHHhCCCCEEEecC
Confidence 36788999999999999988853
No 193
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=24.91 E-value=32 Score=30.58 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|+++++++||+|....
T Consensus 223 ~v~~~~d~~eav~~aDvvyt~~ 244 (325)
T 1vlv_A 223 SVSFTSNLEEALAGADVVYTDV 244 (325)
T ss_dssp EEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEEcCHHHHHccCCEEEecc
Confidence 4777999999999999988854
No 194
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=24.50 E-value=33 Score=30.62 Aligned_cols=22 Identities=9% Similarity=0.238 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|+++++++||+|....
T Consensus 211 ~v~~~~d~~eav~~aDvvytd~ 232 (333)
T 1duv_G 211 NITLTEDVAKGVEGADFIYTDV 232 (333)
T ss_dssp EEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEEECHHHHhCCCCEEEeCC
Confidence 4778999999999999988854
No 195
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=24.48 E-value=34 Score=30.94 Aligned_cols=21 Identities=10% Similarity=-0.048 Sum_probs=18.5
Q ss_pred ceecCCCHHhhcCCCcEEEEc
Q 023853 19 GFLGQQQLEDALTGMDIVIIP 39 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ 39 (276)
+++.+.|++++++|||+|...
T Consensus 238 ~i~~~~d~~eav~~aDVVytd 258 (365)
T 4amu_A 238 SLRFSTDKILAAQDADVIYTD 258 (365)
T ss_dssp EEEEESCHHHHTTTCSEEEEC
T ss_pred EEEEECCHHHHhcCCCEEEec
Confidence 477899999999999998884
No 196
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=24.23 E-value=86 Score=26.00 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=33.3
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++++|+||..++.... ...|....+.+++.+++.+.+ .++.+|
T Consensus 58 ~l~~~~~~~d~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv~-~iv~~S 105 (289)
T 3e48_A 58 SMVEAFKGMDTVVFIPSIIHP--------SFKRIPEVENLVYAAKQSGVA-HIIFIG 105 (289)
T ss_dssp HHHHHTTTCSEEEECCCCCCS--------HHHHHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred HHHHHHhCCCEEEEeCCCCcc--------chhhHHHHHHHHHHHHHcCCC-EEEEEc
Confidence 467789999999999875421 134677778888888887644 344443
No 197
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=24.16 E-value=1e+02 Score=26.69 Aligned_cols=56 Identities=23% Similarity=0.182 Sum_probs=40.6
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPG--MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++++.|+||-.++....+. ....+.+..|+.-...+++.+.+.+.. .+|.+|
T Consensus 84 ~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~-~~V~~S 141 (344)
T 2gn4_A 84 RLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS-QVIALS 141 (344)
T ss_dssp HHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred HHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCC-EEEEec
Confidence 45578899999999998653211 235678889999999999999887643 455554
No 198
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=24.14 E-value=52 Score=29.01 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=34.2
Q ss_pred ceecCCCHHhhcCCCcEEEEcCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAGVP--RK-PGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPV 84 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag~~--~k-~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~ 84 (276)
++..+.|+++++++||+|....=.. +. +-.+|.+.+. . ..+-+.+.+. .|+++|+=. =|+
T Consensus 210 ~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~-~----y~v~~ell~~a~~~ai~mH~-lP~ 273 (315)
T 1pvv_A 210 SFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRKIFR-P----FQVNKDLVKHAKPDYMFMHC-LPA 273 (315)
T ss_dssp EEEEESCHHHHTTTCSEEEECCCCCSSTTSSSSHHHHHHG-G----GCBCHHHHHTSCTTCEEEEC-SCC
T ss_pred eEEEEeCHHHHhCCCCEEEEcceeccCcccchHHHHHHHH-h----cCCCHHHHhhcCCCcEEECC-CCC
Confidence 4777999999999999998854221 11 1123444332 1 2233333344 477776555 464
No 199
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=24.05 E-value=42 Score=26.48 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=24.0
Q ss_pred ccccccCCcccccceecCCCHH---h------hcCCCcEEEEcCCCCC
Q 023853 6 AQNKFDVDSRAVRGFLGQQQLE---D------ALTGMDIVIIPAGVPR 44 (276)
Q Consensus 6 ~~~~~d~~~~~~~~i~~~~d~~---~------al~daDiVii~ag~~~ 44 (276)
+..|.+.........+..+|.+ + +..++|+||+|+|...
T Consensus 46 ~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 46 KQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred HHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 3445555555555555566643 1 2357899999999754
No 200
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=23.97 E-value=32 Score=31.00 Aligned_cols=22 Identities=18% Similarity=0.379 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|+++++++||+|....
T Consensus 252 ~v~~~~d~~eav~~aDvVyt~~ 273 (359)
T 1zq6_A 252 SLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp EEEEECCHHHHHTTCSEEEEEC
T ss_pred eEEEECCHHHHhcCCCEEEECC
Confidence 5778899999999999988864
No 201
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=23.82 E-value=27 Score=30.66 Aligned_cols=23 Identities=4% Similarity=0.063 Sum_probs=19.3
Q ss_pred ceecCCCHHhhcCCCcEEEEcCC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~ag 41 (276)
++..+.|+++++++||+|..+--
T Consensus 200 ~~~~~~d~~eav~~aDvvyt~~~ 222 (299)
T 1pg5_A 200 PVKEVENPFEVINEVDVLYVTRI 222 (299)
T ss_dssp CEEEESCGGGTGGGCSEEEEECC
T ss_pred eEEEeCCHHHHhcCCCEEEeCCc
Confidence 46778999999999999888643
No 202
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=23.73 E-value=1.7e+02 Score=23.04 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=28.2
Q ss_pred CCCcEEEEcCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 023853 31 TGMDIVIIPAGVPRK----PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISN 82 (276)
Q Consensus 31 ~daDiVii~ag~~~k----~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtN 82 (276)
...|+|++..|...- ......+.+..| ++++++.+++.+ +.+++++.
T Consensus 71 ~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~---l~~~i~~~~~~~--~~vil~~~ 121 (240)
T 3mil_A 71 SNIVMATIFLGANDACSAGPQSVPLPEFIDN---IRQMVSLMKSYH--IRPIIIGP 121 (240)
T ss_dssp CCEEEEEEECCTTTTSSSSTTCCCHHHHHHH---HHHHHHHHHHTT--CEEEEECC
T ss_pred CCCCEEEEEeecCcCCccCCCCCCHHHHHHH---HHHHHHHHHHcC--CeEEEEcC
Confidence 479999998886532 222233444444 466777777764 45666653
No 203
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.64 E-value=51 Score=27.85 Aligned_cols=22 Identities=9% Similarity=-0.019 Sum_probs=17.0
Q ss_pred eecCCCHHhhcCCCcEEEEcCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag 41 (276)
+..+.+++++++++|+||++..
T Consensus 49 ~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 49 AETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEECSSHHHHHHHCSEEEECCS
T ss_pred CeecCCHHHHHhCCCEEEEECC
Confidence 4456788888889999998764
No 204
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=23.61 E-value=33 Score=30.82 Aligned_cols=22 Identities=18% Similarity=0.379 Sum_probs=19.1
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+|..+.|+++|+++||+|..+-
T Consensus 252 ~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 252 SLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp EEEEECCHHHHHTTCSEEEEEC
T ss_pred CcccccCHHHHhcCCeEEEEEE
Confidence 4778999999999999988853
No 205
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=23.60 E-value=1.3e+02 Score=28.15 Aligned_cols=51 Identities=18% Similarity=0.151 Sum_probs=33.5
Q ss_pred ceecCCCHHhhcCC---CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 023853 19 GFLGQQQLEDALTG---MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPV 84 (276)
Q Consensus 19 ~i~~~~d~~~al~d---aDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~ 84 (276)
++..+.|+++++++ ||+||++...+ . .++++.+.+..+- |+.+||..+|-.
T Consensus 58 gi~~~~s~~e~v~~l~~aDvVil~Vp~~----~-----------~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 58 SIIGATSIEDFISKLKRPRKVMLLVKAG----A-----------PVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SEECCSSHHHHHHTSCSSCEEEECCCSS----H-----------HHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CeEEeCCHHHHHhcCCCCCEEEEEcCCh----H-----------HHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 46778899887776 99999975322 1 2344555666654 456777787643
No 206
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=23.48 E-value=76 Score=27.52 Aligned_cols=18 Identities=11% Similarity=0.209 Sum_probs=14.3
Q ss_pred CCCHHh-hcCCCcEEEEcC
Q 023853 23 QQQLED-ALTGMDIVIIPA 40 (276)
Q Consensus 23 ~~d~~~-al~daDiVii~a 40 (276)
+.|+++ ++++||+||++.
T Consensus 84 ~~~~~~~~~~~aDvVilav 102 (314)
T 3ggo_A 84 TTSIAKVEDFSPDFVMLSS 102 (314)
T ss_dssp ESCTTGGGGGCCSEEEECS
T ss_pred cCCHHHHhhccCCEEEEeC
Confidence 567777 789999998875
No 207
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=23.38 E-value=54 Score=28.81 Aligned_cols=22 Identities=23% Similarity=0.123 Sum_probs=19.1
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|+++++++||+|...-
T Consensus 201 ~~~~~~d~~eav~~aDvvyt~~ 222 (307)
T 3tpf_A 201 KISLGYDKFEALKDKDVVITDT 222 (307)
T ss_dssp EEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEEcCHHHHhcCCCEEEecC
Confidence 5778899999999999988854
No 208
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=23.38 E-value=62 Score=26.98 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=39.5
Q ss_pred CHHhhcCC--CcEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALTG--MDIVIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~d--aDiVii~ag~~~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
++++++++ +|+||-+++.... ...+..+.+..|+.....+.+.+.+.+. .++.+|
T Consensus 45 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 103 (299)
T 1n2s_A 45 GVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA--WVVHYS 103 (299)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEE
T ss_pred HHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEe
Confidence 35566776 9999999886431 1245677888999999999999887654 455554
No 209
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.30 E-value=1.5e+02 Score=25.21 Aligned_cols=52 Identities=12% Similarity=-0.048 Sum_probs=37.9
Q ss_pred hhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 28 DALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 28 ~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
.++.++|+||-+++..... ..+..+.+..|+.....+.+.+.+.+. .+|.+|
T Consensus 87 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 140 (343)
T 2b69_A 87 PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAS 140 (343)
T ss_dssp CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEE
T ss_pred hhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEC
Confidence 3578899999998854311 234567788899999999999988764 555554
No 210
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=23.09 E-value=61 Score=25.32 Aligned_cols=37 Identities=11% Similarity=-0.043 Sum_probs=21.8
Q ss_pred ccccCCcccccceecCCCHH-------hhcC--CCcEEEEcCCCCC
Q 023853 8 NKFDVDSRAVRGFLGQQQLE-------DALT--GMDIVIIPAGVPR 44 (276)
Q Consensus 8 ~~~d~~~~~~~~i~~~~d~~-------~al~--daDiVii~ag~~~ 44 (276)
.+++............+|.+ ++++ ++|+||+|+|...
T Consensus 29 ~l~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 29 VLAGGPFEVAAYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp HHTTSSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred HHHHCCCeEeEEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 34454443344344455543 2444 7999999999754
No 211
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=23.06 E-value=36 Score=30.67 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=19.0
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+++.+.|+++++++||+|....
T Consensus 232 ~v~~~~d~~eav~~aDvvytd~ 253 (359)
T 2w37_A 232 KLVITDDLDEGLKGSNVVYTDV 253 (359)
T ss_dssp CEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEEeCHHHHhcCCCEEEEcc
Confidence 4778999999999999988853
No 212
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=23.05 E-value=11 Score=33.16 Aligned_cols=56 Identities=23% Similarity=0.267 Sum_probs=38.7
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
.+++++++++|+||-+++.... ....+....|+...+.+++.+++.+....++.+|
T Consensus 38 ~~l~~~~~~~d~Vih~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S 93 (369)
T 3st7_A 38 EELESALLKADFIVHLAGVNRP--EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS 93 (369)
T ss_dssp HHHHHHHHHCSEEEECCCSBCT--TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred HHHHHHhccCCEEEECCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 3566778899999999886542 2233345567777888888888877665555554
No 213
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=22.83 E-value=63 Score=26.88 Aligned_cols=55 Identities=20% Similarity=0.073 Sum_probs=39.3
Q ss_pred CHHhhcC--CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALT--GMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~--daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ ++|+||-+++..... ..+..+.+..|+.-...+.+.+.+.+. .+|.+|
T Consensus 54 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~iv~~S 112 (292)
T 1vl0_A 54 AVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS 112 (292)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred HHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEec
Confidence 3556677 799999999864311 134567788899999999999988764 555554
No 214
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=22.75 E-value=2.2e+02 Score=22.29 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=29.7
Q ss_pred CCCcEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 31 TGMDIVIIPAGVPR---KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 31 ~daDiVii~ag~~~---k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
.+.|+|++..|... ..... ..-++++++.+++..|++.|++++
T Consensus 82 ~~pd~vvi~~G~ND~~~~~~~~--------~~~l~~li~~i~~~~p~~~ii~~~ 127 (215)
T 2vpt_A 82 HNPDVVFLWIGGNDLLLNGNLN--------ATGLSNLIDQIFTVKPNVTLFVAD 127 (215)
T ss_dssp HCCSEEEEECCHHHHHHHCCCC--------HHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred cCCCEEEEEccccccCCCCChh--------HHHHHHHHHHHHHhCCCCEEEEEe
Confidence 47899999887421 00111 245678888999889999887776
No 215
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=22.73 E-value=17 Score=36.65 Aligned_cols=56 Identities=16% Similarity=0.271 Sum_probs=34.9
Q ss_pred hhcCCCcEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCC
Q 023853 28 DALTGMDIVIIPAGVPR---KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLI-SNPVN 85 (276)
Q Consensus 28 ~al~daDiVii~ag~~~---k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivv-tNP~d 85 (276)
++.++||+||+..|... .+|.+|.++-.- .--.++++.+.+.+|+.++++. +.|++
T Consensus 569 ~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP--~~Q~~LI~aV~a~~~~tVVVl~sG~pv~ 628 (845)
T 3abz_A 569 ELAAKHDKAVLIIGLNGEWETEGYDRENMDLP--KRTNELVRAVLKANPNTVIVNQSGTPVE 628 (845)
T ss_dssp HHHHTSSEEEEEEECCTTTSBTTBCCSSSCCC--TTHHHHHHHHHHHCSCEEEEEECSSCCC
T ss_pred HHHhcCCEEEEEEecCCccccccCCcccccCC--HHHHHHHHHHHHhCCCEEEEEeCCCccc
Confidence 34689999999877542 344455433110 1124566667778888865555 78998
No 216
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=22.58 E-value=37 Score=30.08 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=18.9
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|+++++++||+|....
T Consensus 210 ~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 210 KLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CEEEESCHHHHHTTCSEEEECC
T ss_pred eEEEEECHHHHhccCCEEEEec
Confidence 4778899999999999998844
No 217
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=22.58 E-value=23 Score=31.22 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=25.7
Q ss_pred ccccccccCCcccccceec-CCCHH--hhcCCCcEEEEcCCCC
Q 023853 4 PLAQNKFDVDSRAVRGFLG-QQQLE--DALTGMDIVIIPAGVP 43 (276)
Q Consensus 4 ~~~~~~~d~~~~~~~~i~~-~~d~~--~al~daDiVii~ag~~ 43 (276)
|+++.+..... .|.-..- |.|++ +.+++|||||.+.|.|
T Consensus 180 p~A~lL~~~gA-tVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p 221 (300)
T 4a26_A 180 PVAALLMKENA-TVTIVHSGTSTEDMIDYLRTADIVIAAMGQP 221 (300)
T ss_dssp HHHHHHHHTTC-EEEEECTTSCHHHHHHHHHTCSEEEECSCCT
T ss_pred HHHHHHHHCCC-eEEEEeCCCCCchhhhhhccCCEEEECCCCC
Confidence 55555554322 3332222 56788 8999999999999865
No 218
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=22.50 E-value=37 Score=31.06 Aligned_cols=22 Identities=27% Similarity=0.383 Sum_probs=18.8
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
+|..+.|+++|++|||+|....
T Consensus 253 ~i~~~~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 253 SFRQVTSMEEAFKDADIVYPKS 274 (399)
T ss_dssp EEEEESCHHHHHTTCSEEEECC
T ss_pred EEEEEcCHHHHhCCCCEEEecC
Confidence 4678899999999999988853
No 219
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=22.42 E-value=1.3e+02 Score=27.91 Aligned_cols=52 Identities=4% Similarity=-0.039 Sum_probs=34.2
Q ss_pred ceecCCCHHhhcCC---CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 023853 19 GFLGQQQLEDALTG---MDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNPVN 85 (276)
Q Consensus 19 ~i~~~~d~~~al~d---aDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP~d 85 (276)
++..+.|+++++++ ||+||++.-.+ . .++++.+.+..+- |+.+||..+|-..
T Consensus 62 gi~~~~s~~e~v~~l~~aDvVil~Vp~~----~-----------~v~~vl~~l~~~l~~g~iIId~s~g~~ 117 (480)
T 2zyd_A 62 KLVPYYTVKEFVESLETPRRILLMVKAG----A-----------GTDAAIDSLKPYLDKGDIIIDGGNTFF 117 (480)
T ss_dssp CEEECSSHHHHHHTBCSSCEEEECSCSS----S-----------HHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred CeEEeCCHHHHHhCCCCCCEEEEECCCH----H-----------HHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 46678899887777 99999975322 1 1333445555554 5668888888653
No 220
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=22.41 E-value=37 Score=31.26 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=19.1
Q ss_pred ceecCCCHHhhcCCCcEEEEcC
Q 023853 19 GFLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 19 ~i~~~~d~~~al~daDiVii~a 40 (276)
++..+.|++++++|||+|..+.
T Consensus 250 ~v~~~~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 250 NFTKTNSMAEAFKDADVVYPKS 271 (418)
T ss_dssp EEEEESCHHHHHTTCSEEEECC
T ss_pred EEEEEcCHHHHhcCCCEEEEcc
Confidence 4677899999999999999864
No 221
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=22.19 E-value=37 Score=29.77 Aligned_cols=21 Identities=10% Similarity=0.058 Sum_probs=18.5
Q ss_pred eecCCCHHhhcCCCcEEEEcC
Q 023853 20 FLGQQQLEDALTGMDIVIIPA 40 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~a 40 (276)
+..+.|+++++++||+|..+.
T Consensus 201 ~~~~~d~~eav~~aDvvy~~~ 221 (301)
T 2ef0_A 201 AFFTHDPKEAALGAHALYTDV 221 (301)
T ss_dssp CEEESCHHHHHTTCSEEEECC
T ss_pred eEEECCHHHHhcCCCEEEecC
Confidence 778999999999999988854
No 222
>2qyb_A Membrane protein, putative; GAF domain, domain of putative membrane protein, PSI-2, MCSG structural genomics; 2.40A {Geobacter sulfurreducens pca}
Probab=22.17 E-value=1.7e+02 Score=21.79 Aligned_cols=44 Identities=25% Similarity=0.248 Sum_probs=30.0
Q ss_pred EEEEeEEEcCC---ceEEEcc---CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 023853 227 FFASKVRLGRA---GIEEIYS---LGPLNEYERAGLEKAKKELAGSIQKG 270 (276)
Q Consensus 227 ~~s~Pv~ig~~---Gv~~i~~---~~~L~~~E~~~l~~sa~~i~~~~~~~ 270 (276)
++++|...+.+ |+..+.. ...+++++.+.|+.-+.++--.++.+
T Consensus 110 ~~~vPl~~~~~~~~GvL~l~~~~~~~~f~~~d~~lL~~la~~~a~al~~a 159 (181)
T 2qyb_A 110 FAHIPISRKGEPPFGILSVFSRTIVGLFNEPFLNLLESLAGQLAQAVKIV 159 (181)
T ss_dssp EEEEEECCTTSCCCEEEEEEESSCSSCCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEeCCCeEEEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 55667665433 4444332 23689999999999998887777655
No 223
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=21.82 E-value=1e+02 Score=25.91 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=39.6
Q ss_pred CHHhhcC--CCcEEEEcCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 25 QLEDALT--GMDIVIIPAGVPRKP---GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 25 d~~~al~--daDiVii~ag~~~k~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
+++++++ ++|+||-+++..... ..+..+.+..|+.....+.+.+.+.+.. .+|.+|
T Consensus 46 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S 106 (321)
T 1e6u_A 46 AVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN-KLLFLG 106 (321)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred HHHHHHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEc
Confidence 4556677 899999998864311 1245677888999999999999886543 555555
No 224
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=21.78 E-value=1e+02 Score=26.93 Aligned_cols=51 Identities=16% Similarity=0.305 Sum_probs=33.6
Q ss_pred CCcEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 023853 32 GMDIVIIPAGVPR-KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVN 85 (276)
Q Consensus 32 daDiVii~ag~~~-k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d 85 (276)
..|+|||..|... ..+....+.+. .-++++++.+++..|++.|++++.|..
T Consensus 225 ~Pd~VvI~lG~ND~~~~~~~~~~~~---~~l~~li~~ir~~~p~~~I~l~~~p~~ 276 (347)
T 2waa_A 225 QPDLIISAIGTNDFSPGIPDRATYI---NTYTRFVRTLLDNHPQATIVLTEGAIL 276 (347)
T ss_dssp CCSEEEECCCHHHHSSSCCCHHHHH---HHHHHHHHHHHHHCTTCEEEECCCSSC
T ss_pred CCCEEEEEccccCCCCCCCcHHHHH---HHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5799999887531 11112233344 346778888998899998888885543
No 225
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=21.71 E-value=56 Score=27.57 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=28.4
Q ss_pred CCHHhhcCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 023853 24 QQLEDALTG--MDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81 (276)
Q Consensus 24 ~d~~~al~d--aDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvt 81 (276)
.++++++++ +|+||.++|..... ..+..+.+..|+.-...+.+.+.+.+. .+|.+|
T Consensus 50 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S 109 (315)
T 2ydy_A 50 NAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA--FLIYIS 109 (315)
T ss_dssp --CHHHHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTC--EEEEEE
T ss_pred HHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence 345556664 89999998864321 234556777888888999998888753 555554
No 226
>3r7w_B Gtpase2, GTP-binding protein GTR2; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_B*
Probab=21.70 E-value=1.6e+02 Score=25.96 Aligned_cols=52 Identities=10% Similarity=0.126 Sum_probs=37.1
Q ss_pred HhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCC
Q 023853 27 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNS 86 (276)
Q Consensus 27 ~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~ 86 (276)
+.-+++|+.+|+.-..... +......++++...+.+++|+..+++++|=+|.
T Consensus 67 ~~yyr~a~~~IlV~Ditd~--------~~~~~~~l~~~l~~~~~~~~~ipillvgNK~DL 118 (331)
T 3r7w_B 67 ERLFKSVGALVYVIDSQDE--------YINAITNLAMIIEYAYKVNPSINIEVLIHKVDG 118 (331)
T ss_dssp HHHHTTCSEEEEECCCSSC--------TTHHHHHHHHHHHHHHHHCTTCEEEEECCCCCS
T ss_pred hhhccCCCEEEEEEECCch--------HHHHHHHHHHHHHHHhhcCCCCcEEEEEECccc
Confidence 3458999999997654431 223344556667777778899889999999994
No 227
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=21.56 E-value=1.5e+02 Score=24.44 Aligned_cols=52 Identities=23% Similarity=0.341 Sum_probs=33.9
Q ss_pred CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCC-CcEEEEecC
Q 023853 31 TGMDIVIIPAGVPRKP---GMT---RDDLFNINAGI----VKTLCEGIAKCCP-KAIVNLISN 82 (276)
Q Consensus 31 ~daDiVii~ag~~~k~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p-~~~vivvtN 82 (276)
.+.|+||..+|..... ..+ ....+..|+.- .+.+.+.+++... .+.||+++.
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS 172 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS 172 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence 3799999999864321 122 34456666665 7777888877764 477777763
No 228
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=21.27 E-value=80 Score=29.18 Aligned_cols=44 Identities=20% Similarity=0.138 Sum_probs=29.5
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~ 84 (276)
.++++++++||+|+.+.+...--+. +.+....+++++++++++.
T Consensus 258 ~sL~eal~~ADVVilt~gt~~iI~~-----------------e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 258 LLVEDVVEEAHIFVTTTGNDDIITS-----------------EHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp CCHHHHTTTCSEEEECSSCSCSBCT-----------------TTGGGCCTTEEEEECSSSG
T ss_pred cCHHHHHhhCCEEEECCCCcCccCH-----------------HHHhhcCCCcEEEEeCCCC
Confidence 3799999999999987653221111 1234456788999998764
No 229
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=20.95 E-value=81 Score=26.19 Aligned_cols=45 Identities=18% Similarity=0.205 Sum_probs=29.7
Q ss_pred CCHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCC
Q 023853 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVN 85 (276)
Q Consensus 24 ~d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~d 85 (276)
++. ++++++|+||++..... ++++.+.+..+ .++.+++.++|..+
T Consensus 56 ~~~-~~~~~~d~vi~~v~~~~----------------~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 56 NDP-DFLATSDLLLVTLKAWQ----------------VSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp SCH-HHHHTCSEEEECSCGGG----------------HHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred cCc-cccCCCCEEEEEecHHh----------------HHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 344 57899999999864321 23344555555 36778888899876
No 230
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=20.91 E-value=91 Score=30.45 Aligned_cols=70 Identities=17% Similarity=0.085 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcHH-HHHHHHHHcCCCCCCCEEEEeec------hHHHHHHHHHHHhCCCCC
Q 023853 61 VKTLCEGIAKCCPKAIVNLISNPVNSTVP-IAAEVFKKVGTYDPKRLLGVTML------DVVRANTFVAEVLGLDPR 130 (276)
Q Consensus 61 ~~~i~~~i~~~~p~~~vivvtNP~d~~~~-v~t~~~~~~~~~~~~rviG~t~l------ds~R~~~~la~~l~v~~~ 130 (276)
+..+-+.+++.+.+++++-+|.=+|+.+. +++..+....|.|+.+|+|+++- .+..-...+|+.+|++..
T Consensus 349 ~~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~ 425 (680)
T 3sdb_A 349 VSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFS 425 (680)
T ss_dssp HHHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC--------CHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 34455566667788888999999997531 22222233457778899998531 122223568899987633
No 231
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=20.90 E-value=2.1e+02 Score=22.78 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=33.2
Q ss_pred CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 023853 32 GMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKC---CPKAIVNLISN 82 (276)
Q Consensus 32 daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~~~vivvtN 82 (276)
+.|+||..+|.... .......+..|..-...+.+.+.+. ...+.+|++|.
T Consensus 62 ~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS 114 (255)
T 2dkn_A 62 VLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS 114 (255)
T ss_dssp CCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred CccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEec
Confidence 89999999986542 2346677777877777676665554 23366666653
No 232
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=20.75 E-value=67 Score=28.09 Aligned_cols=110 Identities=13% Similarity=-0.063 Sum_probs=60.0
Q ss_pred CHHhhcCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCCcHHHHHH----HHH-
Q 023853 25 QLEDALTGMDIVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEGIAKC-CPKAIVNLISNPVNSTVPIAAE----VFK- 96 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~--g~~r~~~~~~N~~i~~~i~~~i~~~-~p~~~vivvtNP~d~~~~v~t~----~~~- 96 (276)
+++++++++|+||-+++..... ..+..+.+..|+.....+.+.+.+. +. ..+|.+|... +... .+.
T Consensus 92 ~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~~V~~SS~~-----vyg~~~~~~~~~ 165 (377)
T 2q1s_A 92 LLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRL-KKVVYSAAGC-----SIAEKTFDDAKA 165 (377)
T ss_dssp HHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSC-CEEEEEEEC------------------
T ss_pred HHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEeCCHH-----HcCCCCCCCcCc
Confidence 3556788999999998854211 1245677888999999999988776 33 3455554321 1000 000
Q ss_pred -HcC---CC-CCCCEEEEeechHHHHHHHHHHHhCCCCCCce-eeEEeec
Q 023853 97 -KVG---TY-DPKRLLGVTMLDVVRANTFVAEVLGLDPREVD-VPVVGGH 140 (276)
Q Consensus 97 -~~~---~~-~~~rviG~t~lds~R~~~~la~~l~v~~~~v~-~~ViG~h 140 (276)
... .. ++....|.+.....++-..+++..|++..-++ +.|+|..
T Consensus 166 ~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~ 215 (377)
T 2q1s_A 166 TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPG 215 (377)
T ss_dssp -CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred ccccccccccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCC
Confidence 000 01 11112222223333444445566688877777 7788854
No 233
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.66 E-value=2.8e+02 Score=21.05 Aligned_cols=78 Identities=10% Similarity=-0.016 Sum_probs=41.9
Q ss_pred cCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCCcHHHHHHHHHHcCCCCCCCEEEE
Q 023853 30 LTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 109 (276)
Q Consensus 30 l~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~p~~~vivvtNP~d~~~~v~t~~~~~~~~~~~~rviG~ 109 (276)
+.+||+||++.+.. ..|.. ++..+++.+|+..++..++-.+ ....+.+. | .+.++.-
T Consensus 103 ~~~ad~vi~~~~~~-----------~~~~~----~~~~~~~~~~~~~ii~~~~~~~-----~~~~l~~~-G--~~~vi~p 159 (183)
T 3c85_A 103 TGHVKLVLLAMPHH-----------QGNQT----ALEQLQRRNYKGQIAAIAEYPD-----QLEGLLES-G--VDAAFNI 159 (183)
T ss_dssp CCCCCEEEECCSSH-----------HHHHH----HHHHHHHTTCCSEEEEEESSHH-----HHHHHHHH-T--CSEEEEH
T ss_pred CCCCCEEEEeCCCh-----------HHHHH----HHHHHHHHCCCCEEEEEECCHH-----HHHHHHHc-C--CCEEEch
Confidence 78999999976421 23333 3345666778887766655322 12334443 3 3455554
Q ss_pred eechHHHHHHHHHHHhCCCCC
Q 023853 110 TMLDVVRANTFVAEVLGLDPR 130 (276)
Q Consensus 110 t~lds~R~~~~la~~l~v~~~ 130 (276)
...-..++...+.+.++.+..
T Consensus 160 ~~~~a~~l~~~~~~~~~~~~~ 180 (183)
T 3c85_A 160 YSEAGSGFARHVCKQLEPQFT 180 (183)
T ss_dssp HHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHhcCCccc
Confidence 333344555555566665443
No 234
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=20.58 E-value=1.2e+02 Score=25.33 Aligned_cols=43 Identities=19% Similarity=0.320 Sum_probs=27.0
Q ss_pred CHHhhcCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 023853 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCC-PKAIVNLISNP 83 (276)
Q Consensus 25 d~~~al~daDiVii~ag~~~k~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~~~vivvtNP 83 (276)
+..+++++||+||++.... .++++.+.+..+. ++.+++..++.
T Consensus 60 ~~~~~~~~aDvVi~av~~~----------------~~~~v~~~l~~~l~~~~ivv~~s~~ 103 (286)
T 3c24_A 60 DGDGWIDEADVVVLALPDN----------------IIEKVAEDIVPRVRPGTIVLILDAA 103 (286)
T ss_dssp CSSGGGGTCSEEEECSCHH----------------HHHHHHHHHGGGSCTTCEEEESCSH
T ss_pred CHHHHhcCCCEEEEcCCch----------------HHHHHHHHHHHhCCCCCEEEECCCC
Confidence 5566889999999976311 1355556666554 56666666653
No 235
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=20.52 E-value=1.2e+02 Score=24.92 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=15.0
Q ss_pred eecCCCHHhhcCCCcEEEEcCC
Q 023853 20 FLGQQQLEDALTGMDIVIIPAG 41 (276)
Q Consensus 20 i~~~~d~~~al~daDiVii~ag 41 (276)
+..+.++++++ +||+||++..
T Consensus 46 ~~~~~~~~~~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 46 VETSATLPELH-SDDVLILAVK 66 (263)
T ss_dssp CEEESSCCCCC-TTSEEEECSC
T ss_pred CEEeCCHHHHh-cCCEEEEEeC
Confidence 44456676677 9999998763
No 236
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.25 E-value=41 Score=26.63 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=22.1
Q ss_pred cccccCCcccccceecCCCHH-------hhcC--CCcEEEEcCCCCC
Q 023853 7 QNKFDVDSRAVRGFLGQQQLE-------DALT--GMDIVIIPAGVPR 44 (276)
Q Consensus 7 ~~~~d~~~~~~~~i~~~~d~~-------~al~--daDiVii~ag~~~ 44 (276)
..++++.....+.....+|.+ ++++ ++|+||+|+|...
T Consensus 35 ~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 35 DSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp HHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred HHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 344454444444344555543 2444 4999999999754
No 237
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=20.14 E-value=66 Score=27.46 Aligned_cols=57 Identities=19% Similarity=0.178 Sum_probs=38.2
Q ss_pred CHHhhc-CCCcEEEEcCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhC----CCcEEEEec
Q 023853 25 QLEDAL-TGMDIVIIPAGVPRK-PGMTRDDLFNINAGIVKTLCEGIAKCC----PKAIVNLIS 81 (276)
Q Consensus 25 d~~~al-~daDiVii~ag~~~k-~g~~r~~~~~~N~~i~~~i~~~i~~~~----p~~~vivvt 81 (276)
++++++ .++|+||-+++.... ...+..+.+..|+.-...+.+.+.+.+ +.+.+|.+|
T Consensus 78 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~S 140 (342)
T 2hrz_A 78 EAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTS 140 (342)
T ss_dssp HHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred HHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeC
Confidence 455566 489999999986431 012445667788888888888888765 235555554
No 238
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=20.14 E-value=98 Score=26.64 Aligned_cols=56 Identities=16% Similarity=-0.037 Sum_probs=38.7
Q ss_pred HHhhcCC--CcEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCC--cEEEEec
Q 023853 26 LEDALTG--MDIVIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEGIAKCCPK--AIVNLIS 81 (276)
Q Consensus 26 ~~~al~d--aDiVii~ag~~~k--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~--~~vivvt 81 (276)
+++++++ .|+||-++|.... ...+....+..|+.-...+.+.+.+...+ +.+|.+|
T Consensus 70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~S 131 (372)
T 1db3_A 70 LTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAS 131 (372)
T ss_dssp HHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEE
T ss_pred HHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 4445554 5999999886432 12345667788988889999998887642 5666665
No 239
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=20.08 E-value=64 Score=25.28 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=20.1
Q ss_pred cccCCcccccceecCCCHH-------hhcC-CCcEEEEcCCCCC
Q 023853 9 KFDVDSRAVRGFLGQQQLE-------DALT-GMDIVIIPAGVPR 44 (276)
Q Consensus 9 ~~d~~~~~~~~i~~~~d~~-------~al~-daDiVii~ag~~~ 44 (276)
++++.....+.....+|.+ ++++ ++|+||+|+|...
T Consensus 38 l~~~G~~v~~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~ 81 (167)
T 2g2c_A 38 LQDYSYELISEVVVPEGYDTVVEAIATALKQGARFIITAGGTGI 81 (167)
T ss_dssp ---CEEEEEEEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred HHHCCCEEeEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4554444444344555543 2454 5999999999754
No 240
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=20.06 E-value=2.3e+02 Score=19.85 Aligned_cols=48 Identities=10% Similarity=0.131 Sum_probs=33.2
Q ss_pred ccEEEEeEEEcCC--ceEEEcc--C-CCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 023853 225 LPFFASKVRLGRA--GIEEIYS--L-GPLNEYERAGLEKAKKELAGSIQKGVS 272 (276)
Q Consensus 225 ~~~~s~Pv~ig~~--Gv~~i~~--~-~~L~~~E~~~l~~sa~~i~~~~~~~~~ 272 (276)
..++++|.+.+.. |+..+.. . ..+++++.+.|+.-+.++--.++.+..
T Consensus 96 ~s~l~vPl~~~~~~~Gvl~l~~~~~~~~f~~~~~~~l~~la~~~a~ai~~a~l 148 (153)
T 2w3g_A 96 RTFLGVPVRVRDESFGTLYLTDKTNGQPFSDDDEVLVQALAAAAGIAVANARL 148 (153)
T ss_dssp CCEEEEEEEETTEEEEEEEEEEETTSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEeeEEECCEEEEEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4588999986422 3333221 1 269999999999999998877766543
No 241
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=20.02 E-value=3.2e+02 Score=24.58 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEecCCCCC-cHHHHHHHHHHcCCCCCCCEEEE-eechH--HHHHHHHHHHhCCCCCCce
Q 023853 58 AGIVKTLCEGIAKCCPKAIVNLISNPVNS-TVPIAAEVFKKVGTYDPKRLLGV-TMLDV--VRANTFVAEVLGLDPREVD 133 (276)
Q Consensus 58 ~~i~~~i~~~i~~~~p~~~vivvtNP~d~-~~~v~t~~~~~~~~~~~~rviG~-t~lds--~R~~~~la~~l~v~~~~v~ 133 (276)
-.+.+.+++.+.+.+-..+++-+.|-... ...+++.+ .++.+ =++|+ |.... -.+..+|....+...+.=.
T Consensus 280 e~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i-~~~~~----ivlGspT~~~~~~p~~~~~l~~l~~~~~~~K~ 354 (410)
T 4dik_A 280 ENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDI-PDSEA----LIFGVSTYEAEIHPLMRFTLLEIIDKANYEKP 354 (410)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHS-TTCSE----EEEEECCTTSSSCHHHHHHHHHHHHHCCCCCE
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHH-HhCCe----EEEEeCCcCCcCCHHHHHHHHHHHhcccCCCE
Confidence 34566677777776655554444432111 11133221 22222 47788 62111 1344555555555555555
Q ss_pred eeEEeecC
Q 023853 134 VPVVGGHA 141 (276)
Q Consensus 134 ~~ViG~hg 141 (276)
+-++|..|
T Consensus 355 ~~~FGSyG 362 (410)
T 4dik_A 355 VLVFGVHG 362 (410)
T ss_dssp EEEEEECC
T ss_pred EEEEECCC
Confidence 77888774
Done!