RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 023853
(276 letters)
>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 169
Score = 161 bits (407), Expect = 3e-50
Identities = 84/167 (50%), Positives = 114/167 (68%)
Query: 109 VTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTD 168
VT LD+VRAN FVAE+ GLDP V VPV+GGHAG TI+PL+SQ P ++ LT
Sbjct: 1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60
Query: 169 RIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFF 228
RIQ GTEVV+AK GAGSATLSMAYA A+F + + + G GV+EC++V S T+ P+F
Sbjct: 61 RIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYF 120
Query: 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 275
++ + LG+ GIE+ +G ++ +E + +A EL SI+KG FV+
Sbjct: 121 STPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVK 167
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia
coli [TaxId: 562]}
Length = 167
Score = 159 bits (403), Expect = 1e-49
Identities = 89/168 (52%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 109 VTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTD 168
VT LD++R+NTFVAE+ G P EV+VPV+GGH+GVTILPLLSQV T E+ LT
Sbjct: 1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59
Query: 169 RIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFF 228
RIQN GTEVVEAK G GSATLSM AAA+F + +R L+G+ GV+ECAYV FF
Sbjct: 60 RIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFF 119
Query: 229 ASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 276
+ + LG+ G+EE S+G L+ +E+ LE L I G FV K
Sbjct: 120 SQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK 167
>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 163
Score = 112 bits (280), Expect = 3e-31
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 111 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQ----VKPSCSLTPTEIDYL 166
+LD R +F+A LG+ ++++ V+GGH + + + S L ID L
Sbjct: 3 VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62
Query: 167 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELP 226
+R +NGG E+VE GSA + A + + ++ R +
Sbjct: 63 VERTRNGGAEIVEHL-KQGSAFYAPASSVVEMVESI-VLDRKRVLPCAVGLEGQYGIDKT 120
Query: 227 FFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
F V+LGR G+E+IY + L++ + L+K+ K + + +
Sbjct: 121 FVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM 162
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 109 bits (272), Expect = 5e-30
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 7/163 (4%)
Query: 111 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSL----TPTEIDYL 166
+LD R TF+A G+ ++V ++GGH + + P + +
Sbjct: 3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62
Query: 167 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELP 226
+R + GG E+V GSA + A A A+ +A L+ + V + ++
Sbjct: 63 VERTRKGGGEIVNLLKT-GSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIY 121
Query: 227 FFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
F V LG G+E+I L PLNE E A L + K + ++
Sbjct: 122 FG-VPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDT 162
>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish
(Squalus acanthias) [TaxId: 7797]}
Length = 169
Score = 98.8 bits (245), Expect = 4e-26
Identities = 35/172 (20%), Positives = 55/172 (31%), Gaps = 13/172 (7%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTP--------T 161
LD R + E LG+ V+G H S L P
Sbjct: 3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62
Query: 162 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 221
+ L + + EV++ K A + + A A+ ++ L V
Sbjct: 63 DWKKLHKDVVDSAYEVIKLKGYTSWA---IGLSVADLAETIMKNLCRVHPVSTMVKDFYG 119
Query: 222 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSF 273
+ + F + L GI I + L E L+K+ L IQK + F
Sbjct: 120 IKDNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQKSATTLW-DIQKDLKF 169
>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 179
Score = 98.7 bits (245), Expect = 5e-26
Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 13/177 (7%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
T LD RA +A LG+ +V ++ G+ T P ++ K +
Sbjct: 1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60
Query: 170 IQNGGTEVVEAKTGAG---------SATLSMAYAAAKFADACLRGLRGDAGVIECAYVAS 220
E + G S+ +S A A G V
Sbjct: 61 DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120
Query: 221 T---VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 274
V + ++ V + + + L P+N++ R ++ KELA + F+
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEFL 176
>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase
{Bifidobacterium longum, strain am101-2 [TaxId: 216816]}
Length = 170
Score = 94.9 bits (235), Expect = 1e-24
Identities = 24/172 (13%), Positives = 59/172 (34%), Gaps = 17/172 (9%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT---------- 159
T LD R +A+ G++ + V + G H + S ++
Sbjct: 1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60
Query: 160 --PTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAY 217
+ + + ++N +++ K A + + +A L V
Sbjct: 61 LDADKREEIHQEVKNAAYKIINGKGATNYA---IGMSGVDIIEAVLHDTNRILPVSSMLK 117
Query: 218 VASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
++++ L R G+ + P+++ E A L+++ + L + +
Sbjct: 118 DFHGISDICMS-VPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 167
>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 144
Score = 93.5 bits (232), Expect = 2e-24
Identities = 59/92 (64%), Positives = 72/92 (78%)
Query: 17 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAI 76
V+G+LG +QL D L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL A+ CP A+
Sbjct: 53 VKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAM 112
Query: 77 VNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 108
+ +ISNPVNST+PI AEVFKK G Y+P ++ G
Sbjct: 113 ICIISNPVNSTIPITAEVFKKHGVYNPNKIFG 144
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 171
Score = 93.7 bits (232), Expect = 3e-24
Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 8/171 (4%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPS---CSLTPTEIDYL 166
T LD R + + +DPR VD ++G H G + S E
Sbjct: 1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59
Query: 167 TDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVT--- 223
D + V + + Y + + D +
Sbjct: 60 DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL 119
Query: 224 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 274
+ + +G G+++I PL+ E ++ + L + G++ +
Sbjct: 120 NDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAEL 169
>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 172
Score = 93.0 bits (230), Expect = 7e-24
Identities = 34/170 (20%), Positives = 52/170 (30%), Gaps = 7/170 (4%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
T+LD R T +A+ G PR V V V+G H + + L
Sbjct: 2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61
Query: 170 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVT------ 223
+ + K A A A + + S
Sbjct: 62 SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121
Query: 224 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSF 273
+ + V LG+ G+E I L LNE E K+ L +I + +
Sbjct: 122 KDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEITAE 170
>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 172
Score = 92.2 bits (228), Expect = 1e-23
Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 10/170 (5%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
LD R + E LG++P V+G H ++ +L TD+
Sbjct: 3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62
Query: 170 IQNGGTEVVEAKTG--------AGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 221
+ V + G + ++ + A + L+ L+ V
Sbjct: 63 NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122
Query: 222 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271
+ E F + LG +GI + + + E L+K+ L +QK +
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLLKKSADTLWN-MQKNL 170
>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus
casei [TaxId: 1582]}
Length = 172
Score = 92.2 bits (228), Expect = 1e-23
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTP-------TE 162
T LD R +AE++ +D R V ++G H ++ +
Sbjct: 1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60
Query: 163 IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTV 222
D L ++ E G+ +A A A+ + A L + Y+
Sbjct: 61 EDKLVKMFEDVRDAAYEIIKLKGATFYGIATALARISKAILNDENAV--LPLSVYMDGQY 118
Query: 223 TEL-PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVS 272
+ + + R GI+ I + PL ++E ++K+ +L + +
Sbjct: 119 GINDLYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 168
>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 168
Score = 91.1 bits (225), Expect = 3e-23
Identities = 21/173 (12%), Positives = 54/173 (31%), Gaps = 15/173 (8%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT---------- 159
T+LD R + E + P+ V ++G H + +
Sbjct: 1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60
Query: 160 PTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVA 219
+++ + +++ +++E K + + + ++ Y
Sbjct: 61 QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120
Query: 220 STVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVS 272
V + + R GI E+ + LN+ E+ + L + + +
Sbjct: 121 RDV----YIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARAFT 168
>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 168
Score = 91.1 bits (225), Expect = 4e-23
Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 6/164 (3%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
T LD +R +A+ G+ EV ++G H G +++PLLS +
Sbjct: 3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61
Query: 170 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAS----TVTEL 225
I +V + A +R + + +
Sbjct: 62 IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRD 121
Query: 226 PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
V++GR GIEE+ S+ L++ E K+ + + ++
Sbjct: 122 VCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 164
>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 161
Score = 90.3 bits (223), Expect = 5e-23
Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 3/160 (1%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
LD R ++E + V+ ++G H G +P+ S+V + D
Sbjct: 3 GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61
Query: 170 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFA 229
+ + ++ G+ A A +A L + F
Sbjct: 62 LGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHED-TAFG 120
Query: 230 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
V LG G+EEI L++YE+ + A ++L+ K
Sbjct: 121 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 159
>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate
dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId:
1583]}
Length = 163
Score = 90.3 bits (223), Expect = 5e-23
Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 3/165 (1%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
T+LD R V E LDPR V +G H G + S V+ T D
Sbjct: 2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60
Query: 170 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFA 229
+ E + + +Y A A + + DA + +
Sbjct: 61 LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMG-MYLS 119
Query: 230 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 274
+GR G+ +L L E+ L +++ + + V +
Sbjct: 120 YPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIVDTL 163
>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 172
Score = 89.5 bits (221), Expect = 1e-22
Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 18/174 (10%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPT-------- 161
LD R +AE LG+ P ++G H G + + + S V +
Sbjct: 3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61
Query: 162 ----EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAY 217
+ + EV++ K A + + A ++ L+ L V
Sbjct: 62 NDSENWKEVHKMVVESAYEVIKLKGYTNWA---IGLSVADLIESMLKNLSRIHPVSTMVK 118
Query: 218 VASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGV 271
+ F + L G+ + + L + E A L+K+ L IQK +
Sbjct: 119 GMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQLKKSADTLWD-IQKDL 170
>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 169
Score = 89.1 bits (220), Expect = 2e-22
Identities = 23/171 (13%), Positives = 55/171 (32%), Gaps = 16/171 (9%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLT---------- 159
T+LD +R ++E LG+D + V ++G H + ++
Sbjct: 1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60
Query: 160 -PTEIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYV 218
+ + + ++ G +++ K + +R VI Y
Sbjct: 61 TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMY- 119
Query: 219 ASTVTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
E + + G++E+ L E L + +++ + +
Sbjct: 120 ---GIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 166
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria
parasite (Plasmodium falciparum) [TaxId: 5833]}
Length = 165
Score = 85.3 bits (210), Expect = 4e-21
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 111 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPL---------LSQVKPSCSLTPT 161
+LD R ++++ L + PR+V+ +VG H +L L + + ++
Sbjct: 2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61
Query: 162 EIDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 221
E++ + DR N E+V A + A+ L+ + + ++E Y S
Sbjct: 62 ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSD 121
Query: 222 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKEL 263
+ F + V LG G+E++ L LN E+A ++A E
Sbjct: 122 I----FGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAET 158
>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 174
Score = 85.7 bits (211), Expect = 4e-21
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 13/173 (7%)
Query: 111 MLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTE-------- 162
MLD R +VA+ L + PR+V V+G H + + +
Sbjct: 3 MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62
Query: 163 -IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST 221
++ + + + G E+V G GSA + A +A A + L +
Sbjct: 63 QLEEIAEHTKVSGGEIV-RFLGQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYG 121
Query: 222 VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 274
+ + F +G AGIE + L LNE E+ +K+ ++ + K V+ +
Sbjct: 122 LKD-MFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMA-LNKAVAAL 171
>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 82.7 bits (204), Expect = 2e-20
Identities = 52/92 (56%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 17 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAI 76
++GF G+ G D+V+I AGV RKPGM R DLFN+NAGIVK L + +AK CPKA
Sbjct: 55 IKGFSGEDATPAL-EGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKAC 113
Query: 77 VNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 108
+ +I+NPVN+TV IAAEV KK G YD +L G
Sbjct: 114 IGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG 145
>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 173
Score = 81.3 bits (200), Expect = 2e-19
Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 7/164 (4%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVK----PSCSLTPTEIDY 165
T LD RA +A+ G + V G+ T+ P L + P+ L E
Sbjct: 2 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61
Query: 166 LTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST--VT 223
+ S+ S A AA + G V +
Sbjct: 62 KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121
Query: 224 ELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSI 267
E ++ V + L +NE+ R +E +EL +
Sbjct: 122 EGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEITAQELLDEM 164
>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum
arcticum [TaxId: 87645]}
Length = 171
Score = 80.6 bits (198), Expect = 2e-19
Identities = 22/158 (13%), Positives = 44/158 (27%), Gaps = 7/158 (4%)
Query: 112 LDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEID------Y 165
LD RA + +A G ++ V G+ T+ + + I+
Sbjct: 3 LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62
Query: 166 LTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTEL 225
+ G SA + A D L + + + + E
Sbjct: 63 TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122
Query: 226 PFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKEL 263
F V + + L ++ + + + EL
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERINVTLNEL 159
>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum
(Sorghum vulgare), chloroplast [TaxId: 4558]}
Length = 188
Score = 80.5 bits (198), Expect = 4e-19
Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 12/164 (7%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQV-------KPSCSLTPTE 162
T LD RA +A G+ +V + G+ T +P K T
Sbjct: 1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60
Query: 163 IDYLTDRIQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVAST- 221
+ T +Q G +++ S+ S A + A + + Y
Sbjct: 61 EEEFTITVQKRGGALIQKWG--RSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNP 118
Query: 222 --VTELPFFASKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKEL 263
+ E F+ R G E+ + +++ ++K++ EL
Sbjct: 119 YGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAEL 162
>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 154
Score = 78.2 bits (192), Expect = 1e-18
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Query: 17 VRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPK-A 75
+ G + A D ++ PRK GM R DL +N I +A+ K
Sbjct: 65 LAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDV 124
Query: 76 IVNLISNPVNSTVPIAAEVFKKVGTYDPKR 105
V ++ NP N+ IA +K +P+
Sbjct: 125 KVLVVGNPANTNALIA---YKNAPGLNPRN 151
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 77.4 bits (190), Expect = 2e-18
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
DIVII AG+PRKPGMTR+DL NAGIVK + + I K I+ ++SNP++
Sbjct: 65 ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIM 124
Query: 88 VPIAAEVFKKVGTYDPKRLLGV 109
+A +R++G+
Sbjct: 125 THVA----WVRSGLPKERVIGM 142
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium
longum, strain am101-2 [TaxId: 216816]}
Length = 143
Score = 76.9 bits (189), Expect = 3e-18
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
+ D+V+I AG +KPG +R +L I+K + + K P AI LI+NPV+
Sbjct: 65 EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD-- 122
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
IA V +K+ ++ G
Sbjct: 123 --IATHVAQKLTGLPENQIFG 141
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 76.3 bits (187), Expect = 6e-18
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 25 QLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPV 84
L G +I+++ AG+ RKPGMTR DL + NAGI+K + + I + P++ + +++NP+
Sbjct: 62 ADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121
Query: 85 NSTVPIAAEVFKKVGTYDPKRLLGV 109
+ I K + G+
Sbjct: 122 DVMTYIM----WKESGKPRNEVFGM 142
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 140
Score = 71.7 bits (175), Expect = 3e-16
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
L G D+VI+ AGVP+KPG TR L NA ++K + ++K P +IV +++NPV+
Sbjct: 63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD-- 120
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
+ F K DP+++ G
Sbjct: 121 --VLTYFFLKESGMDPRKVFG 139
>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum
vulgare), chloroplast [TaxId: 4558]}
Length = 175
Score = 71.2 bits (174), Expect = 9e-16
Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 11 DVDSRAVRGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAK 70
D +R + +D ++ PR PGM R L +IN I + +
Sbjct: 79 DSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNA 138
Query: 71 CCPK-AIVNLISNPVNSTVPIAAE 93
K V ++ NP N+ I +
Sbjct: 139 VASKNVKVLVVGNPCNTNALICLK 162
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 70.5 bits (172), Expect = 1e-15
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 27 EDALTGMDIVIIPAGVPRKPG-----MTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81
E ALTG D VI+ AG+ + PG +R+DL N+ I++ + + I K CPK + +++
Sbjct: 71 EAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130
Query: 82 NPVNSTVPIAAEVFKKVGTYDPKRLLG 108
NP++ V + E + G
Sbjct: 131 NPLDCMVKVMCEASG----VPTNMICG 153
>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 154
Score = 69.7 bits (170), Expect = 2e-15
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIV 77
+ + + E A +D+ I+ +PR+ GM R DL N I K + K K++
Sbjct: 65 KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVK 124
Query: 78 NL-ISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 109
+ + NP N+ A++ + + +
Sbjct: 125 VIVVGNPANTNCLTASKSAPSI---PKENFSCL 154
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 68.9 bits (168), Expect = 3e-15
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
D++++ +G PRKPGM+R+DL +NA I + A P A++ +++NP+++
Sbjct: 65 ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAM 124
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
+AAEV + +R++G
Sbjct: 125 TYLAAEVSG----FPKERVIG 141
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 68.6 bits (167), Expect = 4e-15
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 18 RGFLGQQQLEDALTGMDIVIIPAGVPRKPGMT-----RDDLFNINAGIVKTLCEGIAKCC 72
+ D L G D+VI+ AG + PG + RDDL +N I+ + I K C
Sbjct: 57 NCKVSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 116
Query: 73 PKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLGV 109
P A + +++NPV+ V + + +++G+
Sbjct: 117 PNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL 149
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus
pentosus [TaxId: 1589]}
Length = 146
Score = 68.1 bits (166), Expect = 5e-15
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
D+V+I AG P+KPG +R DL N N I+ ++ + + I + +NPV+
Sbjct: 68 SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD-- 125
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
I K + +R++G
Sbjct: 126 --ILTYATWKFSGFPKERVIG 144
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium
thermocellum [TaxId: 1515]}
Length = 142
Score = 67.7 bits (165), Expect = 8e-15
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
+ D++++ AG RKPG TR DL N I K + + I K ++ ++SNPV+
Sbjct: 64 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDII 123
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
+ +K +++G
Sbjct: 124 TYMI----QKWSGLPVGKVIG 140
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 67.7 bits (165), Expect = 1e-14
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
+ +VII AG G TR DL N I+K + G+ + P + +++NPV+
Sbjct: 83 NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDIL 142
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
+ K+ + R++G
Sbjct: 143 TYVVW----KISGFPVGRVIG 159
>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 142
Score = 66.9 bits (163), Expect = 2e-14
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
+ G D+V+I AG+PR+PG TR DL NA I++ + + + I SNPV+
Sbjct: 66 EDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVD-- 123
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
+ + G ++++G
Sbjct: 124 --LLNRHLYEAGDRSREQVIG 142
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 65.9 bits (160), Expect = 5e-14
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNPVNST 87
D D+V+I AG +KPG TR DL + N I +++ E + + + + +NPV+
Sbjct: 70 DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD-- 127
Query: 88 VPIAAEVFKKVGTYDPKRLLG 108
I K +R++G
Sbjct: 128 --ILTYATWKFSGLPHERVIG 146
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 63.9 bits (155), Expect = 3e-13
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83
+ IV++ AGV ++ G +R +L N + K + I K P I+ ++SNP
Sbjct: 80 DKDYSVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139
Query: 84 VNSTVPIAAEVFKKVGTYDPKRLLG 108
V+ + K+ R++G
Sbjct: 140 VDILTYVT----WKLSGLPKHRVIG 160
>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 152
Score = 63.1 bits (153), Expect = 4e-13
Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 12/160 (7%)
Query: 110 TMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDR 169
LD R + + R ++G H G ++ S + + + +
Sbjct: 2 NQLDSQRLKERLYNAGARNIR--RAWIIGEH-GDSMFVAKSLADFDG---EVDWEAVEND 55
Query: 170 IQNGGTEVVEAKTGAGSATLSMAYAAAKFADACLRGLRGDAGVIECAYVASTVTELPFFA 229
++ EV++ K + A A + A + + +
Sbjct: 56 VRFVAAEVIKRKG---ATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENV-AVG 111
Query: 230 SKVRLGRAGIEEIYSLGPLNEYERAGLEKAKKELAGSIQK 269
+LG+ G E L++ E L + K L +++
Sbjct: 112 VPAKLGKNGAEVADI--KLSDEEIEKLRNSAKILRERLEE 149
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase,
L-HICDH {Lactobacillus confusus [TaxId: 1583]}
Length = 146
Score = 63.2 bits (153), Expect = 5e-13
Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 28 DALTGMDIVIIPAGVPR----KPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLISNP 83
AL D+VI G + P R + +V+++ + + ++ +ISNP
Sbjct: 65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNP 124
Query: 84 VNSTVPIAAEVFKKVGTYDPKRLLG 108
V+ + +F+ V + +++G
Sbjct: 125 VD----VITALFQHVTGFPAHKVIG 145
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 62.4 bits (151), Expect = 1e-12
Identities = 13/102 (12%), Positives = 27/102 (26%), Gaps = 25/102 (24%)
Query: 26 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA---------------- 69
E A+ VI G D+ + G++ G+
Sbjct: 65 FEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYV 124
Query: 70 ---KCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 108
+ A + +NP E + + ++ +G
Sbjct: 125 DTVRKTSNATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 145
Score = 60.9 bits (147), Expect = 2e-12
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 22 GQQQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAIVNLIS 81
+ + D+VII +GVPRK GM+R DL NA IV + IA+ C I +I+
Sbjct: 64 ESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF-VIT 122
Query: 82 NPVNSTVPIAAEVFKKVGTYDPKRLLG 108
NPV+ A ++ ++ G
Sbjct: 123 NPVDVMTYKAL----VDSKFERNQVFG 145
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 169
Score = 60.5 bits (146), Expect = 6e-12
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 26/102 (25%)
Query: 27 EDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGI------------------ 68
AL G D V V +D+ + G++ G
Sbjct: 72 RRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIR 131
Query: 69 --AKCCPKAIVNLISNPVNSTVPIAAEVFKKVGTYDPKRLLG 108
+ CP A + +NP + E + ++++G
Sbjct: 132 DMEELCPDAWLINFTNPAG----MVTEAVLRY--TKQEKVVG 167
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA
{Bacillus subtilis [TaxId: 1423]}
Length = 167
Score = 57.7 bits (139), Expect = 6e-11
Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 24/93 (25%)
Query: 26 LEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIA---------------- 69
E+A T +D V+ V + D+ + G+V G
Sbjct: 71 PEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEIL 130
Query: 70 ----KCCPKAIVNLISNPVNSTVPIAAEVFKKV 98
K P A + SNP I AE +++
Sbjct: 131 DYMEKYSPDAWMLNYSNPAA----IVAEATRRL 159
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 53.2 bits (127), Expect = 2e-09
Identities = 10/77 (12%), Positives = 19/77 (24%), Gaps = 8/77 (10%)
Query: 28 DALTGMDIVIIPAGVPRKPGMTRDDLFNI--------NAGIVKTLCEGIAKCCPKAIVNL 79
L + + G R ++ + + I K PKA
Sbjct: 90 TYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQ 149
Query: 80 ISNPVNSTVPIAAEVFK 96
+NP+ +
Sbjct: 150 AANPIFEGTTLVTRTVP 166
>d1riqa2 d.104.1.1 (A:1-236) Alanyl-tRNA synthetase (AlaRS) {Aquifex
aeolicus [TaxId: 63363]}
Length = 236
Score = 30.7 bits (69), Expect = 0.15
Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 20/115 (17%)
Query: 42 VPRKPGMTRDD--LFNINAGIV--KTLCEGIAKCCPKAIVNLISNPVNSTVPIAAEVFKK 97
V P + +D L +NAG+V K + G+ K K + + + ++
Sbjct: 23 VKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATS-CQKCLRVSGK--HNDLEQ 79
Query: 98 VGTYDPKRLLGVTMLD------------VVRANTFVAEVLGLDPREVDVPVVGGH 140
VG Y + ML + A FV EVL L ++ V V
Sbjct: 80 VG-YTSRHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDD 133
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 30.0 bits (66), Expect = 0.27
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 159 TPTEIDYLTDRIQNGGTEVVEAKTGAG--SATLSMAYAAAKFADACLRGLRGDAGVIECA 216
P +DY+ + G + + GAG L +A A D G VI
Sbjct: 15 APPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLP 74
Query: 217 Y 217
Sbjct: 75 A 75
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 477
Score = 28.8 bits (63), Expect = 0.73
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 6/31 (19%)
Query: 76 IVNLISNPVNSTVPIAAEVFKKVGTYDPKRL 106
I+NL N + VGT+ L
Sbjct: 446 IMNLQYTEANR------YDYVHVGTWHEGVL 470
>d1pyfa_ c.1.7.1 (A:) Putative oxidoreductase IolS {Bacillus
subtilis [TaxId: 1423]}
Length = 311
Score = 28.4 bits (62), Expect = 0.81
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 231 KVRLGRAGIE--EI----YSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 274
K +LG++ ++ I ++G N Y E K+ + +I+ GV+ +
Sbjct: 2 KAKLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTML 51
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 27.5 bits (60), Expect = 1.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 183 GAGSATLSMAYAAAKFADACLRGLR 207
GAG A LS A + A + LR
Sbjct: 39 GAGPAGLSAATRLKQLAAQHEKDLR 63
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 26.1 bits (56), Expect = 4.3
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 8/78 (10%)
Query: 195 AAKFADACLRGLRGDAGVIECAYVASTVTELPFFASKVRLGRAGIEEIYSLG-------P 247
AA R G I ++ T P + + IE + P
Sbjct: 200 AANLQADLERAGIHPWGWIINNSLSIADTRSPLLRMRAQQELPQIESVKRQHASRVALVP 259
Query: 248 LNEYERAGLEKAKKELAG 265
+ E G++ K+LAG
Sbjct: 260 VLASEPTGID-KLKQLAG 276
>d1jhga_ a.4.12.1 (A:) Trp repressor, TrpR {Escherichia coli [TaxId:
562]}
Length = 101
Score = 25.1 bits (55), Expect = 4.4
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 10/42 (23%)
Query: 158 LTPTEIDYLTDRIQ------NGG---TEVVEAKTGAGSATLS 190
LTP E + L R++ G E+ + GAG AT++
Sbjct: 36 LTPDEREALGTRVRIIEELLRGEMSQRELKN-ELGAGIATIT 76
>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 270
Score = 26.0 bits (57), Expect = 4.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 121 VAEVLGLDPREVDVPVVG 138
VA++LG+D V + G
Sbjct: 10 VAKLLGVDADRVHIDFAG 27
>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent
phosphoglycerate mutase, substrate-binding domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 234
Score = 26.2 bits (57), Expect = 4.6
Identities = 7/53 (13%), Positives = 18/53 (33%)
Query: 24 QQLEDALTGMDIVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPKAI 76
++L++ + + I R M RD ++ + + G +
Sbjct: 89 KELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPL 141
>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 308
Score = 25.4 bits (55), Expect = 7.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 121 VAEVLGLDPREVDVPVVG 138
+ E LGL+ +VD V G
Sbjct: 11 IVEKLGLEEEKVDWQVAG 28
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 25.0 bits (54), Expect = 9.5
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 91 AAEVFKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLS 150
E +K T + +T+ V++A + EV+ + +++ V+ + I
Sbjct: 167 VREFLEKNYTDEAIETDDLTIKLVIKA---LLEVVQSGGKNIELAVMRRDQSLKI----- 218
Query: 151 QVKPSCSLTPTEIDYLTDRIQ 171
L P EI+ I+
Sbjct: 219 -------LNPEEIEKYVAEIE 232
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 24.6 bits (53), Expect = 9.9
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 77 VNLISNPVNSTVPIAAEV 94
VN+++ N + +A +
Sbjct: 127 VNMVTYAGNLDIMTSAAL 144
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.392
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,005,637
Number of extensions: 47245
Number of successful extensions: 250
Number of sequences better than 10.0: 1
Number of HSP's gapped: 204
Number of HSP's successfully gapped: 64
Length of query: 276
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 192
Effective length of database: 1,254,276
Effective search space: 240820992
Effective search space used: 240820992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.2 bits)