Query 023855
Match_columns 276
No_of_seqs 332 out of 2167
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 13:55:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023855.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023855hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fxt_A Nucleoside diphosphate- 99.9 7.9E-26 2.7E-30 169.7 10.4 87 12-98 21-112 (113)
2 2fb1_A Conserved hypothetical 99.9 5.6E-24 1.9E-28 182.2 12.9 161 100-267 5-170 (226)
3 3gz5_A MUTT/nudix family prote 99.9 4.5E-23 1.5E-27 178.1 12.8 158 104-267 18-183 (240)
4 3i7u_A AP4A hydrolase; nudix p 99.9 1.3E-22 4.4E-27 159.8 14.1 121 107-237 3-128 (134)
5 3grn_A MUTT related protein; s 99.9 2.3E-21 7.8E-26 155.3 17.6 129 106-240 6-135 (153)
6 3gwy_A Putative CTP pyrophosph 99.9 2.8E-21 9.6E-26 152.6 16.4 123 107-234 5-129 (140)
7 3hhj_A Mutator MUTT protein; n 99.9 1.4E-21 4.7E-26 157.5 13.6 135 96-235 17-154 (158)
8 1vcd_A NDX1; nudix protein, di 99.9 3.1E-21 1.1E-25 149.1 15.1 119 108-235 2-121 (126)
9 4dyw_A MUTT/nudix family prote 99.9 1.6E-21 5.4E-26 157.3 13.8 131 97-231 18-150 (157)
10 3h95_A Nucleoside diphosphate- 99.9 5.2E-21 1.8E-25 160.3 17.2 139 97-240 15-156 (199)
11 2fml_A MUTT/nudix family prote 99.9 5.1E-21 1.7E-25 168.2 17.1 160 100-267 31-224 (273)
12 3u53_A BIS(5'-nucleosyl)-tetra 99.9 4.2E-21 1.4E-25 154.4 14.8 126 110-240 5-144 (155)
13 3ees_A Probable pyrophosphohyd 99.9 4.5E-21 1.5E-25 152.9 13.9 126 108-241 21-146 (153)
14 1ktg_A Diadenosine tetraphosph 99.9 1E-20 3.4E-25 148.5 15.2 124 108-237 3-134 (138)
15 3r03_A Nudix hydrolase; struct 99.9 1E-20 3.4E-25 149.6 15.3 122 107-233 7-131 (144)
16 3gg6_A Nudix motif 18, nucleos 99.9 1.2E-20 4.2E-25 151.4 15.7 127 105-236 17-145 (156)
17 2pbt_A AP4A hydrolase; nudix p 99.9 9.3E-21 3.2E-25 147.8 14.4 122 107-238 3-129 (134)
18 2fvv_A Diphosphoinositol polyp 99.9 2.1E-21 7.2E-26 162.4 10.5 151 104-263 36-188 (194)
19 2w4e_A MUTT/nudix family prote 99.9 2E-21 6.9E-26 154.6 9.8 117 106-224 3-119 (145)
20 2rrk_A ORF135, CTP pyrophospho 99.9 1.7E-20 5.9E-25 147.4 15.0 121 111-236 11-132 (140)
21 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 6.1E-20 2.1E-24 144.5 17.1 121 104-233 5-133 (139)
22 1f3y_A Diadenosine 5',5'''-P1, 99.8 8.6E-21 2.9E-25 153.1 12.4 130 107-240 13-163 (165)
23 2fkb_A Putative nudix hydrolas 99.8 4.2E-20 1.4E-24 151.9 16.7 129 108-242 37-168 (180)
24 3son_A Hypothetical nudix hydr 99.8 1.8E-20 6.3E-25 149.3 13.6 127 108-240 5-143 (149)
25 2kdv_A RNA pyrophosphohydrolas 99.8 5.9E-20 2E-24 149.4 16.7 132 106-242 6-155 (164)
26 3oga_A Nucleoside triphosphata 99.8 3.7E-20 1.3E-24 150.1 15.4 118 105-225 24-152 (165)
27 3i9x_A MUTT/nudix family prote 99.8 9.9E-21 3.4E-25 157.0 11.7 136 109-244 28-178 (187)
28 3exq_A Nudix family hydrolase; 99.8 2.8E-20 9.7E-25 150.5 14.0 127 105-240 7-136 (161)
29 3q1p_A Phosphohydrolase (MUTT/ 99.8 5.1E-20 1.7E-24 155.1 16.0 128 104-240 64-197 (205)
30 1rya_A GDP-mannose mannosyl hy 99.8 4.5E-20 1.5E-24 148.4 14.8 116 106-225 16-141 (160)
31 3id9_A MUTT/nudix family prote 99.8 4.9E-20 1.7E-24 150.2 15.2 115 106-225 21-138 (171)
32 1mk1_A ADPR pyrophosphatase; n 99.8 3.8E-21 1.3E-25 162.3 8.2 119 106-225 41-161 (207)
33 3cng_A Nudix hydrolase; struct 99.8 1.1E-19 3.9E-24 150.9 16.8 125 104-236 36-162 (189)
34 3shd_A Phosphatase NUDJ; nudix 99.8 1.3E-19 4.3E-24 144.9 16.4 129 107-241 4-133 (153)
35 2yvp_A NDX2, MUTT/nudix family 99.8 3.9E-21 1.3E-25 158.5 7.7 120 104-224 37-156 (182)
36 2b0v_A Nudix hydrolase; struct 99.8 6.9E-20 2.4E-24 146.2 14.7 131 107-241 7-139 (153)
37 1sjy_A MUTT/nudix family prote 99.8 2.2E-19 7.6E-24 144.2 16.4 118 106-225 11-133 (159)
38 1vhz_A ADP compounds hydrolase 99.8 7.1E-20 2.4E-24 153.5 12.9 115 108-225 49-163 (198)
39 3o8s_A Nudix hydrolase, ADP-ri 99.8 1.1E-19 3.7E-24 153.2 14.1 127 103-239 65-197 (206)
40 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1.3E-19 4.4E-24 149.0 14.2 112 107-225 24-137 (176)
41 3f6a_A Hydrolase, nudix family 99.8 2.1E-19 7.2E-24 144.8 14.7 111 107-225 5-136 (159)
42 1v8y_A ADP-ribose pyrophosphat 99.8 7.2E-20 2.5E-24 149.4 12.0 114 107-224 33-146 (170)
43 1nqz_A COA pyrophosphatase (MU 99.8 6E-20 2.1E-24 153.0 11.7 121 102-223 28-152 (194)
44 2o1c_A DATP pyrophosphohydrola 99.8 1.5E-19 5.2E-24 143.4 13.5 124 108-241 9-148 (150)
45 3eds_A MUTT/nudix family prote 99.8 6.3E-20 2.2E-24 147.1 11.0 113 105-225 18-138 (153)
46 1mut_A MUTT, nucleoside tripho 99.8 2.1E-20 7.1E-25 144.8 7.7 117 112-233 8-125 (129)
47 2azw_A MUTT/nudix family prote 99.8 1.5E-19 5.1E-24 143.3 12.7 120 105-233 15-142 (148)
48 1g0s_A Hypothetical 23.7 kDa p 99.8 2.4E-19 8.1E-24 151.5 13.0 120 106-225 55-182 (209)
49 1vk6_A NADH pyrophosphatase; 1 99.8 4.7E-19 1.6E-23 155.1 14.6 129 104-242 136-264 (269)
50 1q27_A Putative nudix hydrolas 99.8 2.4E-19 8.2E-24 146.1 11.5 125 108-236 34-165 (171)
51 3fcm_A Hydrolase, nudix family 99.8 1.5E-18 5.1E-23 145.0 16.5 131 105-241 42-187 (197)
52 1k2e_A Nudix homolog; nudix/MU 99.8 3.1E-19 1E-23 143.6 11.3 116 109-239 2-137 (156)
53 2b06_A MUTT/nudix family prote 99.8 9E-19 3.1E-23 140.2 14.0 113 105-225 5-122 (155)
54 2dsc_A ADP-sugar pyrophosphata 99.8 8.2E-20 2.8E-24 154.6 7.5 104 120-224 77-185 (212)
55 2pqv_A MUTT/nudix family prote 99.8 1.9E-19 6.6E-24 144.1 9.2 111 107-225 18-132 (154)
56 3q91_A Uridine diphosphate glu 99.8 1.9E-19 6.6E-24 153.0 9.5 132 93-224 21-190 (218)
57 3fk9_A Mutator MUTT protein; s 99.8 1.1E-18 3.9E-23 144.9 13.8 116 109-233 5-126 (188)
58 1x51_A A/G-specific adenine DN 99.8 9.4E-19 3.2E-23 140.4 12.8 126 107-240 18-148 (155)
59 1hzt_A Isopentenyl diphosphate 99.8 1.9E-19 6.4E-24 149.6 8.7 131 109-242 33-173 (190)
60 2a6t_A SPAC19A8.12; alpha/beta 99.8 4.3E-21 1.5E-25 168.4 -1.9 193 14-225 12-215 (271)
61 3f13_A Putative nudix hydrolas 99.8 3.7E-18 1.3E-22 138.7 13.9 113 109-236 16-129 (163)
62 2jvb_A Protein PSU1, mRNA-deca 99.8 3.9E-19 1.3E-23 140.9 7.7 110 110-225 6-117 (146)
63 3o6z_A GDP-mannose pyrophospha 99.8 1.7E-18 5.8E-23 144.2 11.2 116 107-223 44-167 (191)
64 2qjo_A Bifunctional NMN adenyl 99.8 1.1E-17 3.9E-22 150.7 15.3 129 104-235 199-338 (341)
65 2qjt_B Nicotinamide-nucleotide 99.8 1.8E-17 6.2E-22 150.1 15.9 133 103-238 203-348 (352)
66 3fjy_A Probable MUTT1 protein; 99.7 6.8E-17 2.3E-21 147.4 14.9 117 118-239 36-176 (364)
67 3e57_A Uncharacterized protein 99.7 1.3E-17 4.4E-22 140.4 8.3 111 107-222 67-188 (211)
68 3fsp_A A/G-specific adenine gl 99.7 1.1E-16 3.9E-21 146.2 13.8 123 108-242 240-362 (369)
69 2dho_A Isopentenyl-diphosphate 99.7 2.9E-16 9.8E-21 134.9 13.3 113 107-222 58-190 (235)
70 2pny_A Isopentenyl-diphosphate 99.7 3.6E-16 1.2E-20 135.1 12.1 112 108-222 70-201 (246)
71 1u20_A U8 snoRNA-binding prote 99.6 3.5E-16 1.2E-20 132.3 6.7 105 111-222 47-165 (212)
72 3dup_A MUTT/nudix family prote 99.6 5.5E-14 1.9E-18 124.3 15.7 179 24-222 53-242 (300)
73 1q33_A Pyrophosphatase, ADP-ri 99.5 1.2E-13 4.3E-18 122.1 16.1 113 121-239 140-278 (292)
74 3qsj_A Nudix hydrolase; struct 99.5 8E-13 2.7E-17 113.0 15.2 113 107-220 7-186 (232)
75 3rh7_A Hypothetical oxidoreduc 99.4 1.4E-12 4.9E-17 116.5 12.5 114 107-244 182-296 (321)
76 2xsq_A U8 snoRNA-decapping enz 99.4 1.7E-13 5.7E-18 116.2 5.8 95 121-221 66-172 (217)
77 3kvh_A Protein syndesmos; NUDT 99.1 7.7E-11 2.6E-15 96.2 5.0 94 121-221 45-148 (214)
78 3bho_A Cleavage and polyadenyl 99.0 1.7E-09 5.8E-14 89.3 11.4 64 108-177 58-130 (208)
79 3fix_A N-acetyltransferase; te 36.9 1.1E+02 0.0037 22.7 7.0 52 40-91 129-180 (183)
80 1wwz_A Hypothetical protein PH 31.7 1.4E+02 0.0047 21.7 6.7 51 42-93 106-156 (159)
81 4ava_A Lysine acetyltransferas 25.9 1.7E+02 0.0057 24.5 7.0 55 41-95 252-306 (333)
82 2cnt_A Modification of 30S rib 25.6 1.9E+02 0.0064 20.8 6.7 44 41-84 83-126 (160)
83 3bqa_A Sensor protein PHOQ; hi 25.2 4.1 0.00014 31.0 -3.1 42 87-128 17-59 (148)
84 3eo4_A Uncharacterized protein 23.3 2.1E+02 0.0071 20.4 6.6 50 41-90 110-159 (164)
85 2oh1_A Acetyltransferase, GNAT 21.6 2.3E+02 0.0078 20.4 7.3 54 41-94 123-176 (179)
86 1mk4_A Hypothetical protein YQ 21.4 2.2E+02 0.0074 19.9 6.3 43 40-82 87-129 (157)
87 2fia_A Acetyltransferase; stru 20.7 2.2E+02 0.0076 19.8 7.1 44 40-83 94-137 (162)
88 3lod_A Putative acyl-COA N-acy 20.6 2.3E+02 0.0078 19.9 6.8 56 40-95 93-154 (162)
No 1
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=99.93 E-value=7.9e-26 Score=169.66 Aligned_cols=87 Identities=31% Similarity=0.703 Sum_probs=81.0
Q ss_pred cccccccccccCCcEEEec-----CCCCChHHHHHHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCc
Q 023855 12 VNKFLNGINDNYGGVVVQM-----NEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPN 86 (276)
Q Consensus 12 ~~~~~~~~~d~~~g~~v~~-----~~~~~~~~f~~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~ 86 (276)
...+|+|..|+||||+|+. ..++|+++|.+.|++||++||.+++++|||+||+.+++|++.|+++||.||||+++
T Consensus 21 ~~~~l~g~~DrygGV~Vd~~~l~~~~~~d~~~F~~~L~~SL~~Wr~~gk~~IWlklpi~~s~lIp~a~~~GF~fHHAe~d 100 (113)
T 3fxt_A 21 QSMDLQGELDRFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAESD 100 (113)
T ss_dssp CCCCCCCEECTTSCEEEEHHHHTTTSCBCHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGGGHHHHHHTTCEEEEEEBT
T ss_pred ccccccCCccCcCCEEEeCCccCCcCcCCHHHHHHHHHHHHHHHHHcCCeeEEEEcCHHHhhhHHHHHHcCceeecCCCC
Confidence 3678999999999999987 34689999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCC
Q 023855 87 YLMLVYWIPGGA 98 (276)
Q Consensus 87 ~~~l~~~~~~~~ 98 (276)
|+||++|+|+++
T Consensus 101 ylmL~~WLpe~p 112 (113)
T 3fxt_A 101 SSTLTLWLREGP 112 (113)
T ss_dssp EEEEEEECCC--
T ss_pred eEEEEEecCcCC
Confidence 999999999876
No 2
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.91 E-value=5.6e-24 Score=182.16 Aligned_cols=161 Identities=17% Similarity=0.309 Sum_probs=127.5
Q ss_pred CCCCCCcceeEEEEEEE---eCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEE
Q 023855 100 TLPANASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (276)
Q Consensus 100 ~~p~~~~~~v~v~~vv~---~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~ 176 (276)
.++.+..+.++|+++|+ +++++|||++|...+ ..|.|.+|||++++||++.+||+||++||||+.+.....++.+
T Consensus 5 ~~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~--~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~ 82 (226)
T 2fb1_A 5 YYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEP--AMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAF 82 (226)
T ss_dssp TTTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSS--STTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEE
T ss_pred ccccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCC--CCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEe
Confidence 35566778889999998 456899999998755 4589999999999999999999999999999999888888776
Q ss_pred eeccCC--CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhhccccCCCCccccc
Q 023855 177 QSHQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDTRGYHGFSPVP 254 (276)
Q Consensus 177 ~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~ 254 (276)
...... .....++|++..... ....++.|+.+++|++++++.++.+++ ..++..+++.+++++.. .+.+|.++|
T Consensus 83 ~~~~r~~~~~~v~~~y~a~~~~~--~~~~~~~e~~~~~W~~~~el~~l~~dh-~~il~~a~~rlr~~~~y-~~i~~~llp 158 (226)
T 2fb1_A 83 GAIDRDPGERVVSIAYYALININ--EYDRELVQKHNAYWVNINELPALIFDH-PEMVDKAREMMKQKASV-EPIGFNLLP 158 (226)
T ss_dssp CCTTSSSSSCEEEEEEEEECCTT--SSCHHHHHHTTEEEEETTSCCCBSTTH-HHHHHHHHHHHHHHHHH-SGGGGGGSC
T ss_pred CCCCcCCCceEEEEEEEEEecCc--ccccCCccccceEEEEHHHhhhccCCH-HHHHHHHHHHHHhhccc-CchHHHhCC
Confidence 543221 223455677765432 222345788999999999999988874 68899999999999888 899999999
Q ss_pred ccccCCCCeeEEE
Q 023855 255 TTSAFSDKKHYFY 267 (276)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (276)
+.|+++ ....+|
T Consensus 159 ~~ftl~-~l~~~y 170 (226)
T 2fb1_A 159 KLFTLS-QLQSLY 170 (226)
T ss_dssp SEEEHH-HHHHHH
T ss_pred ccccHH-HHHHHH
Confidence 999977 344444
No 3
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.89 E-value=4.5e-23 Score=178.08 Aligned_cols=158 Identities=16% Similarity=0.251 Sum_probs=121.3
Q ss_pred CCcceeEEEEEEE---eCCeeEEEEEeccCCCCCCCcEECCccccCC--CCCHHHHHHHHHHHHhCCcceeeEEEEEEee
Q 023855 104 NASHRVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDE--GEDICVAAVREVKEETSIDTEFVEVLAFRQS 178 (276)
Q Consensus 104 ~~~~~v~v~~vv~---~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~--gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~ 178 (276)
+..+.++|+++|+ +++++|||++|...+ .+|.|.+|||++++ ||++.+||+||++||||+++.....++.+..
T Consensus 18 ~~~p~v~v~~vi~~~~~~~~~vLLv~R~~~~--~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~ 95 (240)
T 3gz5_A 18 FKAQLLTVDAVLFTYHDQQLKVLLVQRSNHP--FLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGN 95 (240)
T ss_dssp ---CEEEEEEEEEEEETTEEEEEEEECCSSS--STTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEE
T ss_pred cCCCccEEEEEEEEEeCCCcEEEEEECcCCC--CCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeCC
Confidence 3456678888887 345799999998755 45899999999999 9999999999999999999988888877665
Q ss_pred ccCC--CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHHhhccccCCCCcccccc
Q 023855 179 HQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSAKVDTRGYHGFSPVPT 255 (276)
Q Consensus 179 ~~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~ 255 (276)
.... .....++|++.+... .......|+.+++|++++++....+. .+..++..+++.+.+++.. .+.++.++|+
T Consensus 96 ~~r~~~~~~~~~~y~a~~~~~--~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~kl~y-~~i~~~llp~ 172 (240)
T 3gz5_A 96 NSRDARGWSVTVCYTALMSYQ--ACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQKALY-SLVPGFALSE 172 (240)
T ss_dssp SSSSTTSCEEEEEEEEECCHH--HHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHHHHH-CSGGGGGSCS
T ss_pred CccCCCceEEEEEEEEEeccc--ccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHhccc-CcHHHHhCCC
Confidence 3322 234556677755332 22224578889999999999865554 4588999999999999998 8999999999
Q ss_pred cccCCCCeeEEE
Q 023855 256 TSAFSDKKHYFY 267 (276)
Q Consensus 256 ~~~~~~~~~~~~ 267 (276)
.|+++ ....+|
T Consensus 173 ~Ftl~-~l~~~y 183 (240)
T 3gz5_A 173 PFTLP-ELQHVH 183 (240)
T ss_dssp SBCHH-HHHHHH
T ss_pred CccHH-HHHHHH
Confidence 99987 344444
No 4
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.89 E-value=1.3e-22 Score=159.83 Aligned_cols=121 Identities=22% Similarity=0.411 Sum_probs=90.2
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCC----
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF---- 182 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~---- 182 (276)
..++++++|++ +|+|||++|.. |.|.||||++++|||+.+||+||++||||+.+.....++........
T Consensus 3 ~~~aag~vv~~-~~~vLL~~r~~------g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~ 75 (134)
T 3i7u_A 3 KEFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGER 75 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEE
T ss_pred cEEEEEEEEEE-CCEEEEEEeCC------CcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCce
Confidence 45788888887 58999998753 67999999999999999999999999999999888887654432221
Q ss_pred CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCC-cchHHHHHHHHHH
Q 023855 183 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY-VQNQELLKYIVDI 237 (276)
Q Consensus 183 ~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~-~~~~~~i~~~~~~ 237 (276)
.....++|+|..... .+.+ ..|+.+++|++++++.++.. +.++.+++.+++.
T Consensus 76 ~~~~~~~f~~~~~~~--~~~~-~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l 128 (134)
T 3i7u_A 76 IFKTVKYYLMKYKEG--EPRP-SWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKL 128 (134)
T ss_dssp EEEEEEEEEEEEEEE--CCCC-CTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEEcCC--cCcC-ChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHH
Confidence 223346677765432 2332 36899999999999998654 3556666665543
No 5
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.88 E-value=2.3e-21 Score=155.33 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=100.2
Q ss_pred cceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCce
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEK 185 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (276)
...++|++++++.+++|||++|...+...+|.|.||||++++||++.+||+||++||||+.+....+++...........
T Consensus 6 ~~~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~ 85 (153)
T 3grn_A 6 PYIISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKKV 85 (153)
T ss_dssp CEEEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSSCEE
T ss_pred ceEEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEEEecCCceE
Confidence 35678888899888999999998753235699999999999999999999999999999999988888877766655556
Q ss_pred EEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCC-CcchHHHHHHHHHHHHh
Q 023855 186 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQP-YVQNQELLKYIVDICSA 240 (276)
Q Consensus 186 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~-~~~~~~~i~~~~~~~~~ 240 (276)
..++|.+..... .+.. ..|..+++|++++++.+++ ++ +.++.+++.+++
T Consensus 86 ~~~~~~~~~~~~--~~~~-~~e~~~~~W~~~~el~~~~~~~---~~~~~~l~~l~~ 135 (153)
T 3grn_A 86 IAIVFDGGYVVA--DVKL-SYEHIEYSWVSLEKILGMETLP---AYFRDFFERFDR 135 (153)
T ss_dssp EEEEEEEEECCC--CCCC-CTTEEEEEEECHHHHTTCSSSC---HHHHHHHHHHHH
T ss_pred EEEEEEEEecCC--cEec-CCCcceEEEEEHHHhhhcccch---HHHHHHHHHHhc
Confidence 667777755432 2222 3788899999999999998 64 334445555544
No 6
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.87 E-value=2.8e-21 Score=152.55 Aligned_cols=123 Identities=27% Similarity=0.300 Sum_probs=93.1
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCC-CCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCce
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFR-GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEK 185 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~-~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (276)
+...+++++.+ +++|||++|...+.. .+|.|.||||++++||++.+||+||++||||+.+.....++...+.......
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~~ 83 (140)
T 3gwy_A 5 SIEVVAAVIRL-GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEI 83 (140)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSCCE
T ss_pred EEEEEEEEEEe-CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCceE
Confidence 34556666776 789999999876531 3489999999999999999999999999999999999888887766666667
Q ss_pred EEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHH
Q 023855 186 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYI 234 (276)
Q Consensus 186 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~ 234 (276)
..++|.|..... . ++..|..+++|++++++.++++. .++++++.+
T Consensus 84 ~~~~f~~~~~~~--~--~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~ 129 (140)
T 3gwy_A 84 TMHAFLCHPVGQ--R--YVLKEHIAAQWLSTREMAILDWAEADKPIVRKI 129 (140)
T ss_dssp EEEEEEEEECCS--C--CCCCSSCEEEEECHHHHTTSCBCGGGHHHHHHH
T ss_pred EEEEEEEEecCC--c--ccccccceeEeccHHHHhhCCCCcccHHHHHHH
Confidence 778888866432 2 33478899999999999999887 445544443
No 7
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.87 E-value=1.4e-21 Score=157.47 Aligned_cols=135 Identities=21% Similarity=0.411 Sum_probs=95.3
Q ss_pred CCCCCCCCCCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEE--E
Q 023855 96 GGANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEV--L 173 (276)
Q Consensus 96 ~~~~~~p~~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~--l 173 (276)
.++.+.+........+++++++.+++|||++|..... .+|.|+||||++++||++.+||+||++||||+.+....+ +
T Consensus 17 ~gP~~~~~~~~~~~~~~~~i~~~~~~vLL~~r~~~~~-~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 95 (158)
T 3hhj_A 17 QGPGSMPIKSSLLIVVACALLDQDNRVLLTQRPEGKS-LAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPL 95 (158)
T ss_dssp ----------CEEEEEEEEEBCTTSEEEEEECCCTTS-CCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred CCCccCCCCCceEEEEEEEEEeCCCEEEEEEeCCCCC-CCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEE
Confidence 3556666666667777888888889999999986554 358999999999999999999999999999999877643 4
Q ss_pred EEEeeccCCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHH
Q 023855 174 AFRQSHQSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIV 235 (276)
Q Consensus 174 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~ 235 (276)
+...+..........+|.|.... . .+...|..+++|++++++.++++. ..+.++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~ 154 (158)
T 3hhj_A 96 TFASHGYETFHLLMPLYFCSHYK--G--VAQGREGQNLKWIFINDLDKYPMPEADKPLVQVLK 154 (158)
T ss_dssp EEEEEECSSCEEEEEEEEESCCB--S--CCCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHH
T ss_pred EEEeeccCCcEEEEEEEEEEECC--C--ccCCccccceEEEcHHHHhhCCCCcchHHHHHHHH
Confidence 44444444455566667664322 2 244578889999999999999887 4455555443
No 8
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.87 E-value=3.1e-21 Score=149.13 Aligned_cols=119 Identities=30% Similarity=0.444 Sum_probs=92.8
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEE
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 187 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (276)
.+++++++++.+++|||++|.. |.|.||||++++||++.+||+||++||||+.+.....++...+.........
T Consensus 2 ~~~~~~vi~~~~~~vLl~~r~~------g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 75 (126)
T 1vcd_A 2 ELGAGGVVFNAKREVLLLRDRM------GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVERE 75 (126)
T ss_dssp EEEEEEEEECTTSCEEEEECTT------SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCEEE
T ss_pred eeEEEEEEEcCCCEEEEEEECC------CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceEEE
Confidence 3678899999888999999874 6799999999999999999999999999999988888877655544455566
Q ss_pred EEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHH
Q 023855 188 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIV 235 (276)
Q Consensus 188 ~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~ 235 (276)
.+|.+...... ..++.|+.+++|++++++.++... ..+++++.++
T Consensus 76 ~~~~~~~~~~~---~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~ 121 (126)
T 1vcd_A 76 VHWFLMRGEGA---PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVAL 121 (126)
T ss_dssp EEEEEEEEESC---CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHH
T ss_pred EEEEEEEcCCC---CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHH
Confidence 77777554332 234578899999999999987654 3344444433
No 9
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.87 E-value=1.6e-21 Score=157.32 Aligned_cols=131 Identities=21% Similarity=0.286 Sum_probs=94.4
Q ss_pred CCCCCCCCCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEE
Q 023855 97 GANTLPANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (276)
Q Consensus 97 ~~~~~p~~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~ 176 (276)
++..++....++++|+++|++ +++|||++|.+.+ .++.|.||||++++||++.+||+||++||||+.+....+++..
T Consensus 18 ~p~~m~~~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~ 94 (157)
T 4dyw_A 18 GPGSMQHTEQPRVGCGAAIVR-DGRILLIKRKRAP--EAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVV 94 (157)
T ss_dssp --------CCCEEEEEEEEEE-TTEEEEEEECSSS--STTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEE
T ss_pred CCCCCCCCCCceeEEEEEEEE-CCEEEEEEecCCC--CCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEE
Confidence 455666667788999999998 7899999998765 4689999999999999999999999999999999888888776
Q ss_pred eeccC--CCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHH
Q 023855 177 QSHQS--FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELL 231 (276)
Q Consensus 177 ~~~~~--~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i 231 (276)
..... ......++|.|....... ...+++|+.+++|++++++.+...+....++
T Consensus 95 ~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~l~~~~~~~l 150 (157)
T 4dyw_A 95 DHIDAANGEHWVAPVYLAHAFSGEP-RVVEPDRHEALGWFALDDLPQPLTHATRIAL 150 (157)
T ss_dssp EEEETTTTEEEEEEEEEESEEESCC-CCSCTTTEEEEEEEETTSCCSSBCHHHHHHH
T ss_pred EeeccCCCcEEEEEEEEEEEcCCCc-ccCCCCcEeEEEEECHHHcccccCHHHHHHH
Confidence 65542 233455677775433222 2234578999999999999984333333333
No 10
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.87 E-value=5.2e-21 Score=160.33 Aligned_cols=139 Identities=37% Similarity=0.594 Sum_probs=96.0
Q ss_pred CCCCCCCCCcceeEEEEEEEeC-CeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEE
Q 023855 97 GANTLPANASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAF 175 (276)
Q Consensus 97 ~~~~~p~~~~~~v~v~~vv~~~-~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~ 175 (276)
..+.++.+..+.++|++++++. +++|||+||+.. .+|.|.||||++++||++.+||+||++||||+.+....+++.
T Consensus 15 ~~~~~~~~~~~~v~v~~~v~~~~~~~vLL~~r~~~---~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~ 91 (199)
T 3h95_A 15 TENLYFQSMSHQVGVAGAVFDESTRKILVVQDRNK---LKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSI 91 (199)
T ss_dssp -----------CCEEEEEEEETTTTEEEEEEESSS---STTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_pred ccccccccCcccceEEEEEEeCCCCEEEEEEEcCC---CCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEE
Confidence 3455667788899999999884 589999998753 358999999999999999999999999999999987777775
Q ss_pred Eeecc--CCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHh
Q 023855 176 RQSHQ--SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 240 (276)
Q Consensus 176 ~~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~ 240 (276)
..... .......++|++..........+++.|+.+++|++++++.++... .++...+...++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~--~~~~~~~~~~~~~ 156 (199)
T 3h95_A 92 RQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENT--TPITSRVARLLLY 156 (199)
T ss_dssp EECC---------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSB--CHHHHHHHHHHHH
T ss_pred EeeecCCCCceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhc--ChHHHHHHHHHHh
Confidence 43222 223344567777776555566677899999999999999998654 3444444444443
No 11
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.86 E-value=5.1e-21 Score=168.22 Aligned_cols=160 Identities=16% Similarity=0.222 Sum_probs=119.4
Q ss_pred CCCCCCcceeEEEEEEEe--C---CeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCccee--eEE
Q 023855 100 TLPANASHRVGVGAFVMN--G---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEF--VEV 172 (276)
Q Consensus 100 ~~p~~~~~~v~v~~vv~~--~---~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~--~~~ 172 (276)
.++.+..+.++|+++|+. + +++|||++|...+ .+|.|.||||++++||++.+||+||++||||+.+.. +..
T Consensus 31 ~~~~~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p--~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~ 108 (273)
T 2fml_A 31 ELPEYEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHP--FRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQ 108 (273)
T ss_dssp CCCCCCCCEEEEEEEEEEEETTTTEEEEEEEEECSSS--STTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEE
T ss_pred hcccCCCCceEEEEEEEEEcCCCCCcEEEEEEccCCC--CCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEE
Confidence 345667778888888876 2 3589999998765 358999999999999999999999999999976543 444
Q ss_pred EEEEeeccCC--CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhh-------------------------cCCCc
Q 023855 173 LAFRQSHQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYA-------------------------AQPYV 225 (276)
Q Consensus 173 l~~~~~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~-------------------------~~~~~ 225 (276)
+..+...... .....++|+|.+.... .....|..+++|++++++. .+.++
T Consensus 109 l~~~~~~~r~~~~~~~~~~y~a~~~~~~---~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~Lafd 185 (273)
T 2fml_A 109 LHSFSRPDRDPRGWVVTVSYLAFIGEEP---LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFD 185 (273)
T ss_dssp EEEECCTTSSTTSSEEEEEEEEECCCCC---CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTT
T ss_pred EEEEcCCCCCCCceEEEEEEEEEeCCCC---CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCCccccc
Confidence 5444322221 2345677777654322 3455788999999999742 33344
Q ss_pred chHHHHHHHHHHHHhhccccCCCCcccccccccCCCCeeEEE
Q 023855 226 QNQELLKYIVDICSAKVDTRGYHGFSPVPTTSAFSDKKHYFY 267 (276)
Q Consensus 226 ~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 267 (276)
+..++..+++.++.++.. .+.+|.++|+.|+++ ....+|
T Consensus 186 -H~~Il~~al~rlr~kl~y-~~i~~~llp~~FTl~-~l~~~y 224 (273)
T 2fml_A 186 -HSEIIIKAFNRVVDKMEH-EPQVLQVLGKDFTIT-EARKVF 224 (273)
T ss_dssp -HHHHHHHHHHHHHHHTTT-CCGGGGGGCSCBCHH-HHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcC-CcHHHHhCCccccHH-HHHHHH
Confidence 477899999999999999 999999999999987 444444
No 12
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.86 E-value=4.2e-21 Score=154.42 Aligned_cols=126 Identities=24% Similarity=0.356 Sum_probs=90.9
Q ss_pred EEEEEEE---------eCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEee--
Q 023855 110 GVGAFVM---------NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS-- 178 (276)
Q Consensus 110 ~v~~vv~---------~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~-- 178 (276)
++|++|+ |++.++||+||..+ ++.|.||||++++|||+.+||+||++||||+.+.....+.....
T Consensus 5 a~G~iifr~~~~~~~~n~~~e~LL~~r~~~----~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~ 80 (155)
T 3u53_A 5 ACGLIIFRRCLIPKVDNNAIEFLLLQASDG----IHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKREL 80 (155)
T ss_dssp EEEEEEEEECCCSSSSSCSEEEEEEEESSS----SCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEE
T ss_pred EeEEEEEccccccceeCCCcEEEEEEecCC----CCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeee
Confidence 6777887 45679999999864 47899999999999999999999999999999987776643322
Q ss_pred --ccCCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCC-cchHHHHHHHHHHHHh
Q 023855 179 --HQSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY-VQNQELLKYIVDICSA 240 (276)
Q Consensus 179 --~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~-~~~~~~i~~~~~~~~~ 240 (276)
..........+|++........+. .++|+.+++|++++|+.++.. +..+.+++.+.+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~ 144 (155)
T 3u53_A 81 NYVARNKPKTVIYWLAEVKDYDVEIR-LSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCS 144 (155)
T ss_dssp EEEETTEEEEEEEEEEEESCTTCCCC-CCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHH
T ss_pred ecCCCcceeEEEEEEEEEeccCCccC-CCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhC
Confidence 112223345566666554443333 346899999999999988644 3456666666655544
No 13
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.86 E-value=4.5e-21 Score=152.90 Aligned_cols=126 Identities=21% Similarity=0.224 Sum_probs=95.3
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEE
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 187 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (276)
.+.+++++++.+++|||++|...+. .+|.|.||||++++||++.+||+||++||||+.+.....++...+.........
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~~~-~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~ 99 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPENNS-LAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGILI 99 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTTST-TTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEEEE
T ss_pred eEEEEEEEEEECCEEEEEEeCCCCC-CCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeEEE
Confidence 4455666667679999999987644 359999999999999999999999999999999988888877666655555556
Q ss_pred EEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhh
Q 023855 188 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 241 (276)
Q Consensus 188 ~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~ 241 (276)
++|.+..... .++..|..+++|++++++.++++.. ..+.+++.+.+.
T Consensus 100 ~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~~---~~~~~l~~~~~~ 146 (153)
T 3ees_A 100 LFYEILYWKG----EPRAKHHMMLEWIHPEELKHRNIPE---ANRKILHKIYKA 146 (153)
T ss_dssp EEEEECEEES----CCCCSSSSEEEEECGGGGGGSCCCH---HHHTTHHHHHHH
T ss_pred EEEEEEECCC----CcCCCccceEEEecHHHhhhCCCCc---chHHHHHHHHHh
Confidence 6777754332 2445788899999999999998862 233344444443
No 14
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.86 E-value=1e-20 Score=148.53 Aligned_cols=124 Identities=27% Similarity=0.289 Sum_probs=89.7
Q ss_pred eeEEEEEEEeC---CeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEE----EEEeecc
Q 023855 108 RVGVGAFVMNG---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL----AFRQSHQ 180 (276)
Q Consensus 108 ~v~v~~vv~~~---~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l----~~~~~~~ 180 (276)
..++++++++. +++|||++|+. +++.|.||||++++||++.+||+||++||||+.+.....+ +...+..
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 78 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEA 78 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEe
Confidence 45788888874 47899999873 3579999999999999999999999999999965544433 3333322
Q ss_pred CCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHH
Q 023855 181 SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDI 237 (276)
Q Consensus 181 ~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~ 237 (276)
.......++|+|..... ....++.|+.+++|++++++.++... ....+++.+.+.
T Consensus 79 ~~~~~~~~~f~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 134 (138)
T 1ktg_A 79 KGKPKSVKYWLAKLNNP--DDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAF 134 (138)
T ss_dssp TTEEEEEEEEEEEECSC--CCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEEEecCC--cccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHH
Confidence 23445677888876442 23345688999999999999998665 344555554443
No 15
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.86 E-value=1e-20 Score=149.62 Aligned_cols=122 Identities=25% Similarity=0.357 Sum_probs=91.8
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeE--EEEEEeeccCCCc
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVE--VLAFRQSHQSFFE 184 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~--~l~~~~~~~~~~~ 184 (276)
....+++++++.+++|||++|...+. .+|.|.||||++++||++.+||+||++||||+.+.... .+....+......
T Consensus 7 ~~~~~~~vi~~~~~~vLl~~r~~~~~-~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 85 (144)
T 3r03_A 7 ILLVTAAALIDPDGRVLLAQRPPGKS-LAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTFH 85 (144)
T ss_dssp EEEEEEEEEBCTTSCEEEEECCTTSS-STTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSE
T ss_pred eeEEEEEEEEcCCCEEEEEEeCCCCC-CCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCeE
Confidence 34556677788789999999986654 35999999999999999999999999999999987763 3344444445455
Q ss_pred eEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHH
Q 023855 185 KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKY 233 (276)
Q Consensus 185 ~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~ 233 (276)
....+|.+..... .+...|..+++|++++++.++++. ..+.+++.
T Consensus 86 ~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 131 (144)
T 3r03_A 86 LLMPLYACRSWRG----RATAREGQTLAWVRAERLREYPMPPADLPLIPI 131 (144)
T ss_dssp EEEEEEEECCCBS----CCCCCSSCEEEEECGGGGGGSCCCTTTTTHHHH
T ss_pred EEEEEEEEEecCC----ccCCCCcceEEEEeHHHhccCCCCcchHHHHHH
Confidence 5667777744322 234578889999999999999887 44444443
No 16
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.86 E-value=1.2e-20 Score=151.42 Aligned_cols=127 Identities=24% Similarity=0.310 Sum_probs=96.0
Q ss_pred CcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCc
Q 023855 105 ASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFE 184 (276)
Q Consensus 105 ~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 184 (276)
......+++++++.+++|||++|.+.+ .+|.|.||||++++||++.+||+||++||||+.+....+++..... .+
T Consensus 17 ~~~~~~v~~~i~~~~~~vLl~~r~~~~--~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~---~~ 91 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQDEVLLIQEAKRE--CRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERG---PS 91 (156)
T ss_dssp TTCEEEEEEECBCTTSEEEEEECCCTT--STTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEESS---TT
T ss_pred CceEEEEEEEEEeCCCEEEEEEecCCC--CCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcCC---CC
Confidence 344456777788888999999998765 4689999999999999999999999999999999988888876643 33
Q ss_pred eEEEEEEEEEecCCcCc-CCCccccceEEEEehhhhhcCCCcc-hHHHHHHHHH
Q 023855 185 KSDIFFLCMLRPLSFDI-QKQESEIEAAEWMPLEEYAAQPYVQ-NQELLKYIVD 236 (276)
Q Consensus 185 ~~~~~f~~~~~~~~~~~-~~~~~E~~~~~Wv~~~el~~~~~~~-~~~~i~~~~~ 236 (276)
...++|+|......... ..+++|+.+++|++++++.++.... ...++..+..
T Consensus 92 ~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 145 (156)
T 3gg6_A 92 WVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQ 145 (156)
T ss_dssp EEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHH
T ss_pred EEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHH
Confidence 56678888664332222 2355789999999999999876653 2334444333
No 17
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.85 E-value=9.3e-21 Score=147.85 Aligned_cols=122 Identities=22% Similarity=0.385 Sum_probs=91.7
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccC----C
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS----F 182 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~----~ 182 (276)
...+|++++++ +++|||++|.. |.|.||||++++||++.+||+||++||||+.+.....++....... .
T Consensus 3 ~~~~~~~vi~~-~~~vLl~~r~~------~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 75 (134)
T 2pbt_A 3 KEFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGER 75 (134)
T ss_dssp EEEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEE
T ss_pred cceEEEEEEEE-CCEEEEEEeCC------CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCcE
Confidence 35678888888 67999999874 7899999999999999999999999999999988888776543333 2
Q ss_pred CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHH
Q 023855 183 FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDIC 238 (276)
Q Consensus 183 ~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~ 238 (276)
.....++|.+..... ...+.+ |+.+++|++++++.++... ..+.++..+++.+
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~-e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~ 129 (134)
T 2pbt_A 76 IFKTVKYYLMKYKEG--EPRPSW-EVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLK 129 (134)
T ss_dssp EEEEEEEEEEEEEEE--CCCCCT-TSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEecCC--CcCCCc-ceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHh
Confidence 334556677755432 222333 8999999999999997765 4455555555443
No 18
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.85 E-value=2.1e-21 Score=162.37 Aligned_cols=151 Identities=17% Similarity=0.260 Sum_probs=90.2
Q ss_pred CCcceeEEEEEEEe--CCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccC
Q 023855 104 NASHRVGVGAFVMN--GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS 181 (276)
Q Consensus 104 ~~~~~v~v~~vv~~--~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~ 181 (276)
....+..++++++. .+++|||++|.+. ++.|.||||++++||++.+||+||++||||+++....+++......
T Consensus 36 ~~~~~~~~~~vi~~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~~~~- 110 (194)
T 2fvv_A 36 GDGYKKRAACLCFRSESEEEVLLVSSSRH----PDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQE- 110 (194)
T ss_dssp TTSCEEEEEEEEESSTTCCEEEEEECSSC----TTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEEETT-
T ss_pred cCCccccEEEEEEEECCCCEEEEEEEeCC----CCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEEcCC-
Confidence 44455667777763 4689999998764 3789999999999999999999999999999998888887776432
Q ss_pred CCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhhccccCCCCcccccccccCCC
Q 023855 182 FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDTRGYHGFSPVPTTSAFSD 261 (276)
Q Consensus 182 ~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 261 (276)
.....++|++.+............+..+++|++++++.++... ...++...+..+..+... . .+..+++.+|+++.
T Consensus 111 -~~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~-~~~~~~~~l~~l~~~~~~-~-~~~~~~~~~f~~~~ 186 (194)
T 2fvv_A 111 -RKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY-HKPVQASYFETLRQGYSA-N-NGTPVVATTYSVSA 186 (194)
T ss_dssp -TTEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT-TCHHHHHHTCC------------------------
T ss_pred -CceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc-CcHHHHHHHHHHhhcccc-c-CchhccCcceEEee
Confidence 2345666777543211111111123468999999999886443 245566666666666555 3 58899999999886
Q ss_pred Ce
Q 023855 262 KK 263 (276)
Q Consensus 262 ~~ 263 (276)
+.
T Consensus 187 ~~ 188 (194)
T 2fvv_A 187 QS 188 (194)
T ss_dssp --
T ss_pred cc
Confidence 54
No 19
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.85 E-value=2e-21 Score=154.64 Aligned_cols=117 Identities=20% Similarity=0.090 Sum_probs=84.2
Q ss_pred cceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCce
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEK 185 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (276)
.++.+|++++++.+++|||+++++.+. +++.|+||||++++||++.+||+||++||||+.+.....++...........
T Consensus 3 ~~~~~v~vi~~~~~~~vLLv~~~r~~~-~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 81 (145)
T 2w4e_A 3 RGPRAVFILPVTAQGEAVLIRQFRYPL-RATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFYPQPSISGV 81 (145)
T ss_dssp CCCEEEEEEEEETTSEEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCCC
T ss_pred eeCCEEEEEEEcCCCEEEEEEEEecCC-CCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccCc
Confidence 345688889999889999987765542 3468999999999999999999999999999999877776654443333445
Q ss_pred EEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCC
Q 023855 186 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY 224 (276)
Q Consensus 186 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 224 (276)
..++|++..... .....++.|+.+++|++++++.++..
T Consensus 82 ~~~~f~~~~~~~-~~~~~~~~E~~~~~w~~~~el~~~~~ 119 (145)
T 2w4e_A 82 VFYPLLALGVTL-GAAQLEDTETIERVVLPLAEVYRMLE 119 (145)
T ss_dssp EEEEEEEEEEEE-C--------CEEEEEEEHHHHHHHHH
T ss_pred eEEEEEEEeccc-CCCCCCCCCeEEEEEEeHHHHHHHHH
Confidence 667777753221 23445678899999999999987643
No 20
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.85 E-value=1.7e-20 Score=147.40 Aligned_cols=121 Identities=25% Similarity=0.238 Sum_probs=91.7
Q ss_pred EEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEEEEE
Q 023855 111 VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDIFF 190 (276)
Q Consensus 111 v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f 190 (276)
++++|++.+++|||++|...+. .+|.|+||||++++||++.+||+||++||||+.+.....++...+.........++|
T Consensus 11 ~~~~ii~~~~~vLl~~r~~~~~-~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (140)
T 2rrk_A 11 VVAAIIERDGKILLAQRPAQSD-QAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAW 89 (140)
T ss_dssp EEEEEEEETTEEEEEECCSSCS-CCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEcCCEEEEEEcCCCCC-CCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEEEEEE
Confidence 3444446678999999976554 359999999999999999999999999999999988888877655544444556677
Q ss_pred EEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHH
Q 023855 191 LCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVD 236 (276)
Q Consensus 191 ~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~ 236 (276)
.|..... . ++..|+.+++|++++++.+++++ ....+++.+++
T Consensus 90 ~~~~~~~--~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 132 (140)
T 2rrk_A 90 HVPDFHG--T--LQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMA 132 (140)
T ss_dssp EESEEEE--C--CCCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHH
T ss_pred EEEeeCC--C--cCCCccceeEEeCHHHHhhCCCChhHHHHHHHHHH
Confidence 7744321 1 23467889999999999999887 45566655554
No 21
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.85 E-value=6.1e-20 Score=144.53 Aligned_cols=121 Identities=15% Similarity=0.225 Sum_probs=92.4
Q ss_pred CCcceeEEEEEEEe--CCee--EEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeec
Q 023855 104 NASHRVGVGAFVMN--GKRE--VLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSH 179 (276)
Q Consensus 104 ~~~~~v~v~~vv~~--~~~~--vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~ 179 (276)
+..+.++|+++|++ .+++ |||++|.+.+ +.|.||||++++||++.+||+||++||||+.+....+++.....
T Consensus 5 y~~p~~~v~~vi~~~~~~~~~~vLl~~r~~~~----~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 80 (139)
T 2yyh_A 5 VKTPLLATDVIIRLWDGENFKGIVLIERKYPP----VGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSDP 80 (139)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEEECSSS----CSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCT
T ss_pred ccCCeEEEEEEEEEEcCCCcEEEEEEEecCCC----CcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCC
Confidence 45667788888887 6788 9999998653 34999999999999999999999999999999888888766543
Q ss_pred cCC--CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhh--cCCCcchHHHHHH
Q 023855 180 QSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYA--AQPYVQNQELLKY 233 (276)
Q Consensus 180 ~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~--~~~~~~~~~~i~~ 233 (276)
... .....++|.|.... .+ ...+|+.+++|++++++. .+.+++ .+++..
T Consensus 81 ~~~~~~~~~~~~f~~~~~~---~~-~~~~e~~~~~W~~~~el~~~~l~~~~-~~~l~~ 133 (139)
T 2yyh_A 81 ERDPRAHVVSVVWIGDAQG---EP-KAGSDAKKVKVYRLEEIPLDKLVFDH-KKIILD 133 (139)
T ss_dssp TSCTTSCEEEEEEEEEEES---CC-CCCTTEEEEEEECTTSCCGGGBCTTH-HHHHHH
T ss_pred CcCCCceEEEEEEEEecCC---cc-CCCCCcceEEEEEHHHCCHhhcCCCH-HHHHHH
Confidence 221 34566778887622 22 245788999999999999 777763 444443
No 22
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.85 E-value=8.6e-21 Score=153.14 Aligned_cols=130 Identities=22% Similarity=0.341 Sum_probs=95.3
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEE--EeeccC---
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAF--RQSHQS--- 181 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~--~~~~~~--- 181 (276)
.+.+|++++++.+++|||++|... +|.|.+|||++++||++.+||+||++||||+.+........ ..+...
T Consensus 13 ~~~~v~~~i~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 88 (165)
T 1f3y_A 13 YRRNVGICLMNNDKKIFAASRLDI----PDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKV 88 (165)
T ss_dssp CCCEEEEEEECTTSCEEEEEETTE----EEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHH
T ss_pred eeeeEEEEEECCCCcEEEEecCCC----CCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccc
Confidence 456788889998899999999752 38999999999999999999999999999998753221110 111110
Q ss_pred -----------CCceEEEEEEEEEecCCcCcCC-----CccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHh
Q 023855 182 -----------FFEKSDIFFLCMLRPLSFDIQK-----QESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 240 (276)
Q Consensus 182 -----------~~~~~~~~f~~~~~~~~~~~~~-----~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~ 240 (276)
..+...++|++........+.. ++.|+.+++|++++++.++..+...++++.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~l~~ 163 (165)
T 1f3y_A 89 REKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEFKKPVYKEVLSVFAP 163 (165)
T ss_dssp HHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGGGHHHHHHHHHHHGG
T ss_pred cccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhhhHHHHHHHHHHhhh
Confidence 0123567788876544333333 3578999999999999998877567788888776654
No 23
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.85 E-value=4.2e-20 Score=151.86 Aligned_cols=129 Identities=19% Similarity=0.169 Sum_probs=96.9
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEEC-CccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceE
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKF-PTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 186 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~l-PgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (276)
..++++++++.+++|||++|.......+|.|+| |||++++||++.+||+||++||||+.+.....++.+..........
T Consensus 37 ~~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 116 (180)
T 2fkb_A 37 HRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVW 116 (180)
T ss_dssp EEEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETTEEEE
T ss_pred eeEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCCceEE
Confidence 357788888888899999987654444689999 9999999999999999999999999987777777665554444455
Q ss_pred EEEEEEEEecCCcCcCCCccccceEEEEehhhhhcC--CCcchHHHHHHHHHHHHhhc
Q 023855 187 DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ--PYVQNQELLKYIVDICSAKV 242 (276)
Q Consensus 187 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~--~~~~~~~~i~~~~~~~~~~~ 242 (276)
.++|.|.. ...+.+++.|+.+++|++++++.++ .+. +-...++..++.+.
T Consensus 117 ~~~f~~~~---~~~~~~~~~E~~~~~W~~~~el~~~~~~~~---~~~~~~l~~~~~~~ 168 (180)
T 2fkb_A 117 GALFSCVS---HGPFALQEDEVSEVCWLTPEEITARCDEFT---PDSLKALALWMKRN 168 (180)
T ss_dssp EEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHTTGGGBC---HHHHHHHHHHHHHC
T ss_pred EEEEEEec---CCCcCCChhHhheEEEecHHHHHHHHHHhC---CcHHHHHHHHHHhh
Confidence 66777752 3344556788999999999999998 443 22334454555443
No 24
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.84 E-value=1.8e-20 Score=149.28 Aligned_cols=127 Identities=17% Similarity=0.229 Sum_probs=89.2
Q ss_pred eeEEEEEEE---eCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceee--EEEEEEee---c
Q 023855 108 RVGVGAFVM---NGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFV--EVLAFRQS---H 179 (276)
Q Consensus 108 ~v~v~~vv~---~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~--~~l~~~~~---~ 179 (276)
+.+|+++++ +++++|||++|.. +|.|.+|||++++||++.+||+||++||||+++... .+...... .
T Consensus 5 ~~~v~vvi~~~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 79 (149)
T 3son_A 5 PFQVLVIPFIKTEANYQFGVLHRTD-----ADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFH 79 (149)
T ss_dssp CCEEEEEEEEECSSSEEEEEEEESS-----SSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGG
T ss_pred ceEEEEEEEEecCCCeEEEEEEEcC-----CCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeeccccee
Confidence 456666666 4668999999985 288999999999999999999999999999998764 12122111 1
Q ss_pred ---cCCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHHh
Q 023855 180 ---QSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSA 240 (276)
Q Consensus 180 ---~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~~ 240 (276)
........++|.|........+.+ +.|+.+++|++++++.++... .++.++..+.+.+..
T Consensus 80 ~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 143 (149)
T 3son_A 80 FSFNKPYVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKN 143 (149)
T ss_dssp TCSSSCSEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHT
T ss_pred eccCCceEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 111334456777766532334444 588999999999999998765 455655555554443
No 25
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.84 E-value=5.9e-20 Score=149.35 Aligned_cols=132 Identities=21% Similarity=0.314 Sum_probs=100.2
Q ss_pred cceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEee-----cc
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS-----HQ 180 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~-----~~ 180 (276)
..+.+|++++++.+++|||++|.. ++.|.+|||++++||++.+||+||++||||+.+....+++.... ..
T Consensus 6 ~~~~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~ 80 (164)
T 2kdv_A 6 GYRPNVGIVICNRQGQVMWARRFG-----QHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLP 80 (164)
T ss_dssp SEEEEEEEEEECTTSEEEEEEETT-----CCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECC
T ss_pred CCCcEEEEEEEccCCEEEEEEEcC-----CCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecC
Confidence 456788899999889999999874 47899999999999999999999999999999988887766421 11
Q ss_pred C----------CCceEEEEEEEEEecCCcCcCCC---ccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhhc
Q 023855 181 S----------FFEKSDIFFLCMLRPLSFDIQKQ---ESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKV 242 (276)
Q Consensus 181 ~----------~~~~~~~~f~~~~~~~~~~~~~~---~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~~ 242 (276)
. ..+...++|++.+......+..+ ..|+.+++|++++++.+......++++..++..+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~~l 155 (164)
T 2kdv_A 81 KRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVV 155 (164)
T ss_dssp TTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 0 12235678888765543334333 36899999999999887655545778888877776654
No 26
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.84 E-value=3.7e-20 Score=150.08 Aligned_cols=118 Identities=20% Similarity=0.233 Sum_probs=79.3
Q ss_pred CcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEE------ee
Q 023855 105 ASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR------QS 178 (276)
Q Consensus 105 ~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~------~~ 178 (276)
......+.+++++.+++|||++|.......+|.|+||||++++||++.+||+||++||||+.+....++... ..
T Consensus 24 ~~~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 103 (165)
T 3oga_A 24 AMRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIK 103 (165)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEE
T ss_pred CcceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeE
Confidence 334455556666667899999988543224689999999999999999999999999999999877666432 11
Q ss_pred ccCCCce---E--EEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 179 HQSFFEK---S--DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 179 ~~~~~~~---~--~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
....... . ..+|.+.. ...... ..+|+.+++|++++++.++++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~E~~~~~W~~~~el~~~~~~ 152 (165)
T 3oga_A 104 TYADGRQEEIYMIYLIFDCVS--ANRDIC-INDEFQDYAWVKPEELALYDLN 152 (165)
T ss_dssp EC--CCEEEEEEEEEEEEEEE--SCCCCC-CCTTEEEEEEECGGGGGGSCBC
T ss_pred ecCCCCceeEEEEEEEEEeec--cCCCcc-CCchheeeEEccHHHHhhCCCC
Confidence 1111111 1 22333332 222332 2378899999999999999886
No 27
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.84 E-value=9.9e-21 Score=157.01 Aligned_cols=136 Identities=18% Similarity=0.200 Sum_probs=97.3
Q ss_pred eEEEEEEEe---C----CeeEEEEEeccC-----CCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEE
Q 023855 109 VGVGAFVMN---G----KREVLVVQENSG-----RFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFR 176 (276)
Q Consensus 109 v~v~~vv~~---~----~~~vLLvkr~~~-----~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~ 176 (276)
++|+++|+. + +++|||++|... ....+|.|.+|||++++||++.+||+||++||||+++.....++.+
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~ 107 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVF 107 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEE
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEEEEE
Confidence 666666654 2 468999999531 1114689999999999999999999999999999999988888876
Q ss_pred eeccCCC--ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHHhhccc
Q 023855 177 QSHQSFF--EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSAKVDT 244 (276)
Q Consensus 177 ~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~~~~~~ 244 (276)
....... .....+|++.............+|+.+++|++++++.++.+. .+..++..+++.+.++...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~~~~~~ 178 (187)
T 3i9x_A 108 DKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITEEFLL 178 (187)
T ss_dssp CCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHHHHHHT
T ss_pred cCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHHhhhhc
Confidence 5443221 233455555443222112234578889999999999987665 5677888888877766544
No 28
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.84 E-value=2.8e-20 Score=150.53 Aligned_cols=127 Identities=19% Similarity=0.209 Sum_probs=92.6
Q ss_pred CcceeEEEEEEEeCC-eeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCC-
Q 023855 105 ASHRVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF- 182 (276)
Q Consensus 105 ~~~~v~v~~vv~~~~-~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~- 182 (276)
....+++.++|++++ ++|||++|...+ + .|.|+||||++++||++.+||+||++||||+.+....+++........
T Consensus 7 ~~~~~~v~~vi~~~~~~~vLL~~r~~~~-~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 84 (161)
T 3exq_A 7 QPVELVTMVMVTDPETQRVLVEDKVNVP-W-KAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDR 84 (161)
T ss_dssp CCEEEEEEEEEBCTTTCCEEEECCCCCT-T-TCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSSC
T ss_pred CCceEEEEEEEEeCCCCEEEEEEccCCC-C-CCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCCC
Confidence 345677777888766 799999988544 3 367999999999999999999999999999999988888877665532
Q ss_pred -CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHh
Q 023855 183 -FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 240 (276)
Q Consensus 183 -~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~ 240 (276)
.....++|.|... ... +...|..+++|++++++.++++... .+.+++.+++
T Consensus 85 ~~~~~~~~~~~~~~--~~~--~~~~e~~~~~W~~~~el~~~~~~~~---~~~~l~~~~~ 136 (161)
T 3exq_A 85 QHRKLGLLYRASNF--TGT--LKASAEGQLSWLPITALTRENSAAS---LPEFLQVFTG 136 (161)
T ss_dssp SSEEEEEEEEECCE--ESC--CCGGGTTTEEEECGGGCCTTTBCTT---HHHHHHHHTT
T ss_pred CeEEEEEEEEEecc--CCc--cCCCccceEEEeeHHHhhhCccChH---HHHHHHHHhh
Confidence 2334445555332 222 3457788999999999999887632 2334444444
No 29
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.84 E-value=5.1e-20 Score=155.14 Aligned_cols=128 Identities=23% Similarity=0.341 Sum_probs=98.3
Q ss_pred CCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeecc---
Q 023855 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ--- 180 (276)
Q Consensus 104 ~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~--- 180 (276)
+.++.++|+++|++ +++|||++|.. .|.|.||||++++||++.+||+||++||||+.+....+++......
T Consensus 64 ~~~~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~~ 137 (205)
T 3q1p_A 64 YQTPKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQP 137 (205)
T ss_dssp SCCCEEEEEEEEEE-TTEEEEEEC--------CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHSC
T ss_pred CCCCcceEEEEEEE-CCEEEEEEEcC-----CCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEeccccCC
Confidence 56677889999998 78999999873 4789999999999999999999999999999999888888776431
Q ss_pred --CCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHHh
Q 023855 181 --SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSA 240 (276)
Q Consensus 181 --~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~~ 240 (276)
...+...++|.|..... .+.. +.|+.+++|++++++.++.+. ...+.+..+.+.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~--~~~~-~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~ 197 (205)
T 3q1p_A 138 SPSATHVYKIFIGCEIIGG--EKKT-SIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKD 197 (205)
T ss_dssp CCCSSCEEEEEEEEEEEEE--CCCC-CTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHC
T ss_pred CCCCceEEEEEEEEEecCC--ccCC-CCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhC
Confidence 22455667788866432 2333 378999999999999998876 445666665555443
No 30
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.84 E-value=4.5e-20 Score=148.38 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=88.8
Q ss_pred cceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcce--eeEEEEEEeeccCCC
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTE--FVEVLAFRQSHQSFF 183 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~--~~~~l~~~~~~~~~~ 183 (276)
.+.++|++++++.+++|||++|...+ .+|.|.||||++++||++.+||+||++||||+.+. ....++...+.....
T Consensus 16 ~~~~~v~~vi~~~~~~vLl~~r~~~~--~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 93 (160)
T 1rya_A 16 TPLVSLDFIVENSRGEFLLGKRTNRP--AQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDN 93 (160)
T ss_dssp SCEEEEEEEEECTTSCEEEEEECSSS--STTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSB
T ss_pred CcEEEEEEEEEcCCCEEEEEeccCCC--CCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEccc
Confidence 34578889999888999999998754 36899999999999999999999999999999953 556666554332211
Q ss_pred --------ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 184 --------EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 184 --------~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
....++|.|... ...+..+..|+.+++|++++++.++++.
T Consensus 94 ~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~e~~~~~W~~~~el~~~~~~ 141 (160)
T 1rya_A 94 FSGTDFTTHYVVLGFRFRVS--EEELLLPDEQHDDYRWLTSDALLASDNV 141 (160)
T ss_dssp TTBSSSCEEEEEEEEEEECC--GGGCCCCSSSEEEEEEECHHHHHHCTTB
T ss_pred ccCCCcCcEEEEEEEEEEcC--ccccccCCCccceEEEecHHHHhhcccc
Confidence 344566666543 2344456678999999999999998764
No 31
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.84 E-value=4.9e-20 Score=150.23 Aligned_cols=115 Identities=21% Similarity=0.330 Sum_probs=87.9
Q ss_pred cceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCce
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEK 185 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 185 (276)
...+.|++++++ +++|||++|.+. +|.|.||||++++||++.+||+||++||||+++....+++...........
T Consensus 21 ~~~~~v~~ii~~-~~~vLL~~r~~~----~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~ 95 (171)
T 3id9_A 21 IMQVRVTGILIE-DEKVLLVKQKVA----NRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDKPDASPSL 95 (171)
T ss_dssp -CEEEEEEEEEE-TTEEEEEECSST----TCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSSSCE
T ss_pred ceEEEEEEEEEE-CCEEEEEEEECC----CCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEcccCCCCcE
Confidence 346677777877 589999999863 489999999999999999999999999999999888888877766555555
Q ss_pred EEEEEEEEEecCCcC---cCCCccccceEEEEehhhhhcCCCc
Q 023855 186 SDIFFLCMLRPLSFD---IQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 186 ~~~~f~~~~~~~~~~---~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
..++|.+........ ...++.|+.+++|++++++.++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~ 138 (171)
T 3id9_A 96 LHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFS 138 (171)
T ss_dssp EEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCC
T ss_pred EEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCC
Confidence 666677755432221 1235688999999999999999876
No 32
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.84 E-value=3.8e-21 Score=162.25 Aligned_cols=119 Identities=22% Similarity=0.340 Sum_probs=86.2
Q ss_pred cceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccC-CCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCc
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVD-EGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFE 184 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve-~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 184 (276)
.+..+|++++++.+++|||++|.+.+. +++.|+||||+++ +||++.+||+||++||||+.+.....++..+.......
T Consensus 41 ~~~~av~v~i~~~~~~vLLvrr~r~~~-~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~ 119 (207)
T 1mk1_A 41 EHFGAVAIVAMDDNGNIPMVYQYRHTY-GRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSD 119 (207)
T ss_dssp EECCEEEEEECCTTSEEEEEEEEETTT-TEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTBC
T ss_pred eCCCEEEEEEEcCCCEEEEEEeecCCC-CCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCccc
Confidence 345678888888889999999887664 4589999999999 99999999999999999999988888876644443333
Q ss_pred eEEEEEEEEEecCCcCc-CCCccccceEEEEehhhhhcCCCc
Q 023855 185 KSDIFFLCMLRPLSFDI-QKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 185 ~~~~~f~~~~~~~~~~~-~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
...++|++......... ..++.|+.+++|++++++.++...
T Consensus 120 ~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 161 (207)
T 1mk1_A 120 ESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLR 161 (207)
T ss_dssp CCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHT
T ss_pred cEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 45677777643322211 245688999999999999886544
No 33
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.83 E-value=1.1e-19 Score=150.93 Aligned_cols=125 Identities=21% Similarity=0.298 Sum_probs=94.7
Q ss_pred CCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCC
Q 023855 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF 183 (276)
Q Consensus 104 ~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~ 183 (276)
+..+.++|++++++ +++|||++|.+.+. .+.|.||||++++||++.+||+||++||||+.+....+++...... .
T Consensus 36 ~~~~~~~v~~ii~~-~~~vLL~~r~~~~~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~--~ 110 (189)
T 3cng_A 36 YQNPKVIVGCIPEW-ENKVLLCKRAIAPY--RGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVYSLPH--I 110 (189)
T ss_dssp CCCCEEEEEEEEEE-TTEEEEEEESSSSS--TTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEGG--G
T ss_pred CCCCceEEEEEEEe-CCEEEEEEccCCCC--CCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEEecCC--C
Confidence 34567788888887 78999999987652 5899999999999999999999999999999998777776644332 3
Q ss_pred ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhh--cCCCcchHHHHHHHHH
Q 023855 184 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYA--AQPYVQNQELLKYIVD 236 (276)
Q Consensus 184 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~--~~~~~~~~~~i~~~~~ 236 (276)
....++|++..... .+. ...|+.+++|++++++. .+.++....++...++
T Consensus 111 ~~~~~~f~~~~~~~--~~~-~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~ 162 (189)
T 3cng_A 111 SQVYMLFRAKLLDL--DFF-PGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYME 162 (189)
T ss_dssp TEEEEEEEEEECCS--CCC-CCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHH
T ss_pred cEEEEEEEEEeCCC--ccC-CCccceeEEEECHHHcCcccccChHHHHHHHHHHH
Confidence 56677888866432 222 35788999999999998 5666544444444443
No 34
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.83 E-value=1.3e-19 Score=144.93 Aligned_cols=129 Identities=23% Similarity=0.351 Sum_probs=93.9
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccC-CCce
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS-FFEK 185 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~-~~~~ 185 (276)
++++|++++.+ +++|||++|... +++.|.||||++++||++.+||+||++||||+++....+++....... ....
T Consensus 4 p~~~v~~ii~~-~~~vLl~~r~~~---~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 79 (153)
T 3shd_A 4 PHVTVACVVHA-EGKFLVVEETIN---GKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPF 79 (153)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEET---TEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCCE
T ss_pred CceEEEEEEEe-CCEEEEEEecCC---CCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCceE
Confidence 45666666555 789999998732 458899999999999999999999999999999998888877644333 2344
Q ss_pred EEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhh
Q 023855 186 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 241 (276)
Q Consensus 186 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~ 241 (276)
..++|.|..... ....+++.|+.+++|++++++...+.. ..+.+..++..+++.
T Consensus 80 ~~~~f~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~~l~~~~~~ 133 (153)
T 3shd_A 80 LRFLFAIELEQI-CPTQPHDSDIDCCRWVSAEEILQASNL-RSPLVAESIRCYQSG 133 (153)
T ss_dssp EEEEEEEECSSC-CCCCCCSTTCCEEEEECHHHHHTCSCB-SSTHHHHHHHHHHHT
T ss_pred EEEEEEEEcccc-CcCCCCcccceeeEEecHHHhhccccc-cCchHHHHHHHHHhC
Confidence 567787765432 224566789999999999999433322 134455666666653
No 35
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.83 E-value=3.9e-21 Score=158.52 Aligned_cols=120 Identities=23% Similarity=0.206 Sum_probs=93.5
Q ss_pred CCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCC
Q 023855 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF 183 (276)
Q Consensus 104 ~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~ 183 (276)
+..++.+|++++++.+++|||++|.+.+. +++.|+||||++++||++.+||+||++||||+.+.....++.........
T Consensus 37 ~~~~~~~v~v~i~~~~~~vLL~~r~~~~~-~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~ 115 (182)
T 2yvp_A 37 RPGPVAASFVLPVTERGTALLVRQYRHPT-GKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFT 115 (182)
T ss_dssp BCSSCEEEEEEEBCTTSEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTB
T ss_pred EEecCCEEEEEEEcCCCEEEEEEeccCCC-CCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCcc
Confidence 34556688888898889999999876543 45899999999999999999999999999999998887776655544444
Q ss_pred ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCC
Q 023855 184 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY 224 (276)
Q Consensus 184 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 224 (276)
....++|+|...........++.|+.+++|++++++.++..
T Consensus 116 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 156 (182)
T 2yvp_A 116 AVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLA 156 (182)
T ss_dssp CCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHH
T ss_pred ccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 55677777753221233445778999999999999987643
No 36
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.83 E-value=6.9e-20 Score=146.23 Aligned_cols=131 Identities=21% Similarity=0.186 Sum_probs=93.7
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCC--Cc
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF--FE 184 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~--~~ 184 (276)
++++|++++. .+++|||++|.+.+. ++.|.||||++++||++.+||+||++||||+++....+++........ ..
T Consensus 7 ~~~~v~~ii~-~~~~vLl~~r~~~~~--~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 83 (153)
T 2b0v_A 7 PNVTVAAVIE-QDDKYLLVEEIPRGT--AIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTT 83 (153)
T ss_dssp CEEEEEEECE-ETTEEEEEEECSSSS--CCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEE
T ss_pred CCEEEEEEEe-eCCEEEEEEEcCCCC--CCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcE
Confidence 3455665554 478999999987643 589999999999999999999999999999999888888766433221 22
Q ss_pred eEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhh
Q 023855 185 KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 241 (276)
Q Consensus 185 ~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~ 241 (276)
...++|.+...... .....+.|+.+++|++++++.++......+.++.++..+++.
T Consensus 84 ~~~~~f~~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~~~~~~ 139 (153)
T 2b0v_A 84 YLRFTFSGQVVSFD-PDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAG 139 (153)
T ss_dssp EEEEEEEEEEEEEC-TTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHHHHHTT
T ss_pred EEEEEEEEEeCCCC-CCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHHHHHhC
Confidence 34456777554322 123456788999999999999972223345566666666643
No 37
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.83 E-value=2.2e-19 Score=144.17 Aligned_cols=118 Identities=25% Similarity=0.344 Sum_probs=91.3
Q ss_pred cceeEEEEEEEeCCeeEEEEEecc---CCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCC
Q 023855 106 SHRVGVGAFVMNGKREVLVVQENS---GRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF 182 (276)
Q Consensus 106 ~~~v~v~~vv~~~~~~vLLvkr~~---~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~ 182 (276)
....+++++|++.+++|||++|.+ .+. .+|.|.||||++++||++.+||+||++||||+.+.....++........
T Consensus 11 ~~~~~~~~vi~~~~~~vLl~~r~~~~~~~~-~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~ 89 (159)
T 1sjy_A 11 VELRAAGVVLLNERGDILLVQEKGIPGHPE-KAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPD 89 (159)
T ss_dssp CCEEEEEEEEBCTTCCEEEEEESCC----C-CCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTT
T ss_pred eEEEeEEEEEEeCCCCEEEEEecccCcCCC-CCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCC
Confidence 345678888888889999999986 222 4589999999999999999999999999999999888888776644332
Q ss_pred -CceEEEEEEEEEecCCcCcCC-CccccceEEEEehhhhhcCCCc
Q 023855 183 -FEKSDIFFLCMLRPLSFDIQK-QESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 183 -~~~~~~~f~~~~~~~~~~~~~-~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
.....++|.|...... .+.. +++|+.+++|++++++.++...
T Consensus 90 ~~~~~~~~f~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (159)
T 1sjy_A 90 GVLILRHVWLAEPEPGQ-TLAPAFTDEIAEASFVSREDFAQLYAA 133 (159)
T ss_dssp SCEEEEEEEEEEECSSC-CCCCCCCSSEEEEEEECHHHHHHHHHT
T ss_pred CceEEEEEEEEEccCCC-ccccCCCCceeEEEEecHHHHHHhhhc
Confidence 4456777777664322 1444 6688999999999999886543
No 38
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.82 E-value=7.1e-20 Score=153.49 Aligned_cols=115 Identities=19% Similarity=0.163 Sum_probs=91.6
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEE
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 187 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (276)
..+|++++++++ +|||++|.+.+. +++.|+||||++|+||++.+||+||++||||+.+.....++.............
T Consensus 49 ~~av~vl~~~~~-~vLLvrq~r~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 126 (198)
T 1vhz_A 49 REAVMIVPIVDD-HLILIREYAVGT-ESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKM 126 (198)
T ss_dssp CCEEEEEEEETT-EEEEEEEEETTT-TEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCEE
T ss_pred CCEEEEEEEECC-EEEEEEcccCCC-CCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcEE
Confidence 456777778866 999998876543 357899999999999999999999999999999998888887776655556677
Q ss_pred EEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 188 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 188 ~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
++|+|..... .....++.|..++.|++++++.++...
T Consensus 127 ~~f~a~~~~~-~~~~~~~~E~~~~~w~~~~el~~~~~~ 163 (198)
T 1vhz_A 127 NIVVAQDLYP-ESLEGDEPEPLPQVRWPLAHMMDLLED 163 (198)
T ss_dssp EEEEEEEEEE-CCCCCCCSSCCCEEEEEGGGGGGGGGC
T ss_pred EEEEEEeCCc-ccCCCCCCceEEEEEEEHHHHHHHHHc
Confidence 7888865332 233456788899999999999987654
No 39
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.82 E-value=1.1e-19 Score=153.21 Aligned_cols=127 Identities=26% Similarity=0.441 Sum_probs=96.0
Q ss_pred CCCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccC-
Q 023855 103 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQS- 181 (276)
Q Consensus 103 ~~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~- 181 (276)
.+.+++++|+++|++ +++|||++|. .+.|.||||++++||++.+||+||++||||+.+....+++.......
T Consensus 65 ~y~~~~~~v~~vv~~-~~~vLLvrr~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~ 137 (206)
T 3o8s_A 65 GYQTPKLDTRAAIFQ-EDKILLVQEN------DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNN 137 (206)
T ss_dssp ---CCEEEEEEEEEE-TTEEEEEECT------TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHC
T ss_pred CCCCCCccEEEEEEE-CCEEEEEEec------CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccC
Confidence 356778889999998 4899999987 27899999999999999999999999999999998888887753211
Q ss_pred ----CCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHH
Q 023855 182 ----FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 239 (276)
Q Consensus 182 ----~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~ 239 (276)
......++|.|..... .+.. +.|..+++|++++++.++.+. ...+.+..+.+.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~ 197 (206)
T 3o8s_A 138 PAKSAHRVTKVFILCRLLGG--EFQP-NSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASR 197 (206)
T ss_dssp C-----CEEEEEEEEEEEEE--CCCC-CSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEEEEEecCC--eecC-CCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHH
Confidence 2345567777766433 2322 378999999999999999876 44565555555443
No 40
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.82 E-value=1.3e-19 Score=148.99 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=84.0
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCC--c
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF--E 184 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~--~ 184 (276)
+++ +++++++.+++|||++|.+.+ .+|.|.||||++++||++.+||+||++||||+.+.....++......... .
T Consensus 24 ~~~-~~~~vi~~~~~vLL~~r~~~~--~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 100 (176)
T 3q93_A 24 SRL-YTLVLVLQPQRVLLGMKKRGF--GAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL 100 (176)
T ss_dssp EEE-EEEEEEECSSEEEEEEECSST--TTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCE
T ss_pred CcE-EEEEEEEeCCEEEEEEEcCCC--CCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcE
Confidence 344 444555668899999987654 46999999999999999999999999999999998888887766544332 2
Q ss_pred eEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 185 KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 185 ~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
...++|.|.... .. +...|..+++|++++++.++++.
T Consensus 101 ~~~~~f~~~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~ 137 (176)
T 3q93_A 101 MDVHVFCTDSIQ--GT--PVESDEMRPCWFQLDQIPFKDMW 137 (176)
T ss_dssp EEEEEEEESCEE--SC--CCCCSSEEEEEEETTCCCGGGBC
T ss_pred EEEEEEEEECCC--CC--cCCCcceeeEEeeHHHccccccC
Confidence 344566663222 22 23456678899999999988776
No 41
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.82 E-value=2.1e-19 Score=144.82 Aligned_cols=111 Identities=16% Similarity=0.241 Sum_probs=83.5
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEe---------
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQ--------- 177 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~--------- 177 (276)
...+|+++|++ +++|||++|+. .|.|.||||++++||++.+||+||++||||+.+.....++...
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 78 (159)
T 3f6a_A 5 RHFTVSVFIVC-KDKVLLHLHKK-----AKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGE 78 (159)
T ss_dssp SCEEEEEEEEE-TTEEEEEECSS-----SCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTC
T ss_pred ceEEEEEEEEE-CCEEEEEEcCC-----CCeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccccccccccccccccc
Confidence 34668888888 68999999874 3789999999999999999999999999999997766653210
Q ss_pred -----------ecc-CCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 178 -----------SHQ-SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 178 -----------~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
... .......++|+|.... ..+..+++|..+++|++++++.++.+.
T Consensus 79 ~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~E~~~~~W~~~~el~~~~~~ 136 (159)
T 3f6a_A 79 KLLINPIHTILGDVSPNHSHIDFVYYATTTS--FETSPEIGESKILKWYSKEDLKNAHNI 136 (159)
T ss_dssp EEECCCSEEEEECSSSSSCEEEEEEEEECSC--SCCCCCTTSCCCEEEECSSSSTTCSSS
T ss_pred ccccCccccccccCCCCceEEEEEEEEEeCC--CCcCCCCCcccceEEeeHHHHhhCcCC
Confidence 000 1112344667775433 344556789999999999999999844
No 42
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.82 E-value=7.2e-20 Score=149.36 Aligned_cols=114 Identities=23% Similarity=0.307 Sum_probs=85.4
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceE
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKS 186 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 186 (276)
++.+|++++++ ++++||+++.+.+. +++.|.||||++++||++.+||+||++||||+ +.....++............
T Consensus 33 ~~~~v~vii~~-~~~vLL~~~~r~~~-~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~~~ 109 (170)
T 1v8y_A 33 HKPAVAVIALR-EGRMLFVRQMRPAV-GLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTDEK 109 (170)
T ss_dssp ECCEEEEEEEE-TTEEEEEECCBTTT-TBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBCCE
T ss_pred cCCeEEEEEEE-CCEEEEEEEEeCCC-CCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccccE
Confidence 44578888899 89999999876653 46899999999999999999999999999999 88888887766555545566
Q ss_pred EEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCC
Q 023855 187 DIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPY 224 (276)
Q Consensus 187 ~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~ 224 (276)
.++|+|..... .....++.|+.+++|++++++.++..
T Consensus 110 ~~~f~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~ 146 (170)
T 1v8y_A 110 THVFLAENLKE-VEAHPDEDEAIEVVWMRPEEALERHQ 146 (170)
T ss_dssp EEEEEEEEEEE-CC--------CEEEEECHHHHHHHHH
T ss_pred EEEEEEEeccc-cCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 77888865332 23344678899999999999987543
No 43
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.82 E-value=6e-20 Score=152.97 Aligned_cols=121 Identities=21% Similarity=0.149 Sum_probs=88.8
Q ss_pred CCCCcceeEEEEEEEeCCe--eEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeec
Q 023855 102 PANASHRVGVGAFVMNGKR--EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSH 179 (276)
Q Consensus 102 p~~~~~~v~v~~vv~~~~~--~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~ 179 (276)
...+..+.++++++++.++ +|||++|.......+|.|+||||++++||++.+||+||++||||+++.....++.....
T Consensus 28 ~~~~~~~~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~ 107 (194)
T 1nqz_A 28 LELPHYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDV 107 (194)
T ss_dssp -----CEEEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCE
T ss_pred ccCCCCceEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCc
Confidence 3334556667777778777 99999997642224689999999999999999999999999999999988888776655
Q ss_pred cCCCceEEEEEEEEEecCCcC-cCCCccccceEEEEehhhh-hcCC
Q 023855 180 QSFFEKSDIFFLCMLRPLSFD-IQKQESEIEAAEWMPLEEY-AAQP 223 (276)
Q Consensus 180 ~~~~~~~~~~f~~~~~~~~~~-~~~~~~E~~~~~Wv~~~el-~~~~ 223 (276)
....+...++|++..... .. ...+++|+.+++|++++++ .+..
T Consensus 108 ~~~~~~~~~~f~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 108 FTPVGFHVTPVLGRIAPE-ALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EETTTEEEEEEEEEECGG-GGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred cCCCCeEEEEEEEEecCC-ccccCCCccceeEEEEEEHHHhccCCC
Confidence 444556677888876422 22 4466789999999999999 7643
No 44
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.82 E-value=1.5e-19 Score=143.37 Aligned_cols=124 Identities=23% Similarity=0.272 Sum_probs=88.4
Q ss_pred eeEEEEEEEeCC-eeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceee--EEEEEEeec-----
Q 023855 108 RVGVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFV--EVLAFRQSH----- 179 (276)
Q Consensus 108 ~v~v~~vv~~~~-~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~--~~l~~~~~~----- 179 (276)
.++|++++++.+ +++||++|... +|.|.||||++++||++.+||+||++||||+.+... .+++.....
T Consensus 9 ~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 84 (150)
T 2o1c_A 9 PVSILVVIYAQDTKRVLMLQRRDD----PDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIF 84 (150)
T ss_dssp SEEEEEEEEETTTCEEEEEECSSS----TTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECC
T ss_pred ceEEEEEEEeCCCCEEEEEEecCC----CCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeee
Confidence 468888999864 89999998764 479999999999999999999999999999998763 344332211
Q ss_pred ------c--CCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhh
Q 023855 180 ------Q--SFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAK 241 (276)
Q Consensus 180 ------~--~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~ 241 (276)
. .......++|.|...... . ....|+.+++|++++++.++.+.. ..+.+++.++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~~~~~~~--~-~~~~E~~~~~W~~~~el~~~~~~~---~~~~~l~~~~~~ 148 (150)
T 2o1c_A 85 SHLRHRYAPGVTRNTESWFCLALPHER--Q-IVFTEHLAYKWLDAPAAAALTKSW---SNRQAIEQFVIN 148 (150)
T ss_dssp GGGGGGBCTTCCEEEEEEEEEEESSCC--C-CCCSSSSCEEEEEHHHHHHHCSCH---HHHHHHHHHTTC
T ss_pred cccccccCCCCcceEEEEEEEEcCCCC--C-cChhHhhccEeecHHHHHhhhcCH---HHHHHHHHHHHh
Confidence 0 112355677777664321 1 234789999999999999987752 233444444443
No 45
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.82 E-value=6.3e-20 Score=147.15 Aligned_cols=113 Identities=22% Similarity=0.260 Sum_probs=80.7
Q ss_pred CcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEe-----ec
Q 023855 105 ASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQ-----SH 179 (276)
Q Consensus 105 ~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~-----~~ 179 (276)
.....+|++++++.+++|||++|. ++.|.||||++++||++.+||+||++||||+++....+++... ..
T Consensus 18 ~~~~~~v~~ii~~~~~~vLL~~r~------~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 91 (153)
T 3eds_A 18 LIFXPSVAAVIKNEQGEILFQYPG------GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYT 91 (153)
T ss_dssp CEEEEEEEEEEBCTTCCEEEECC---------CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEE
T ss_pred cEEeeeEEEEEEcCCCeEEEEEcC------CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeee
Confidence 345667888888888999998887 3789999999999999999999999999999999888887652 11
Q ss_pred cCCC---ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 180 QSFF---EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 180 ~~~~---~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
.... .....+|.|.... ..+..+++|+.+++|++++++.++.++
T Consensus 92 ~~~~~~~~~~~~~f~~~~~~--~~~~~~~~E~~~~~W~~~~el~~l~~~ 138 (153)
T 3eds_A 92 YSNGDEVEYIVVVFECEVTS--GELRSIDGESLKLQYFSLSEKPPLALP 138 (153)
T ss_dssp CTTSCEEEEEEEEEEEEEEE--ECCC-------CEEEECGGGCCCBSSC
T ss_pred cCCCCeEEEEEEEEEEEecC--CccccCCCcEEEEEEECHHHCchhccc
Confidence 1111 2245667775543 344456688999999999999998775
No 46
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.82 E-value=2.1e-20 Score=144.80 Aligned_cols=117 Identities=20% Similarity=0.267 Sum_probs=87.9
Q ss_pred EEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEEEEEE
Q 023855 112 GAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDIFFL 191 (276)
Q Consensus 112 ~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~ 191 (276)
.+++++.+++|||++|...+. .+|.|+||||++++||++.+||+||++||||+.+.....++...+.........++|.
T Consensus 8 ~~ii~~~~~~vLl~~r~~~~~-~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (129)
T 1mut_A 8 VGIIRNENNEIFITRRAADAH-MANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWL 86 (129)
T ss_dssp CEECEETTTEEEEEECSSCCS-SSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCEE
T ss_pred EEEEEecCCEEEEEEeCCCCC-CCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEEE
Confidence 345567789999999987643 4599999999999999999999999999999999877666655444443434455677
Q ss_pred EEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHH
Q 023855 192 CMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKY 233 (276)
Q Consensus 192 ~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~ 233 (276)
+..... . +...|..+++|++++++.+++++ ....+++.
T Consensus 87 ~~~~~~--~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 125 (129)
T 1mut_A 87 VERWEG--E--PWGKEGQPGEWMSLVGLNADDFPPANEPVIAK 125 (129)
T ss_dssp EEECSS--C--CCCCSSCCCEEEESSSCCTTTSCTTCHHHHHH
T ss_pred EEccCC--c--cCCcccceeEEeCHHHcccccCCchhHHHHHH
Confidence 765322 2 34567889999999999999887 44555543
No 47
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.81 E-value=1.5e-19 Score=143.33 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=86.4
Q ss_pred CcceeEEEEEEEeC-CeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEe---ec-
Q 023855 105 ASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQ---SH- 179 (276)
Q Consensus 105 ~~~~v~v~~vv~~~-~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~---~~- 179 (276)
...+.+++++|+++ +++|||++|. +|.|.||||++++||++.+||+||++||||+.+.....++... ..
T Consensus 15 ~~~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~ 88 (148)
T 2azw_A 15 YQTRYAAYIIVSKPENNTMVLVQAP------NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSN 88 (148)
T ss_dssp CEECCEEEEECEEGGGTEEEEEECT------TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEET
T ss_pred eeeeeEEEEEEECCCCCeEEEEEcC------CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCC
Confidence 44566788888885 6899999974 2789999999999999999999999999999998887776542 11
Q ss_pred cC--CCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHH
Q 023855 180 QS--FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKY 233 (276)
Q Consensus 180 ~~--~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~ 233 (276)
.. ......++|.|...... ....+|..+++|++++++.++... ..+.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~ 142 (148)
T 2azw_A 89 HRQTAYYNPGYFYVANTWRQL---SEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEK 142 (148)
T ss_dssp TTTEEEEEEEEEEEEEEEEEC---SSCC-CCSEEEEECHHHHHHHBSCHHHHHHHHH
T ss_pred CCCcceEEEEEEEEEEcCcCC---cCCCCceeeEEEeeHHHHHhhhcchhHHHHHHH
Confidence 11 12234666777554321 123467789999999999998765 33444433
No 48
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.81 E-value=2.4e-19 Score=151.55 Aligned_cols=120 Identities=13% Similarity=0.022 Sum_probs=90.0
Q ss_pred cceeEEEEEEEe-CCeeEEEEEeccCCCC----CCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeecc
Q 023855 106 SHRVGVGAFVMN-GKREVLVVQENSGRFR----GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ 180 (276)
Q Consensus 106 ~~~v~v~~vv~~-~~~~vLLvkr~~~~~~----~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~ 180 (276)
.+..+|++++++ ++++|||+++.+.+.. +++.|+||||++|+||++.+||+||++||||+.+..+..++......
T Consensus 55 ~~~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~ 134 (209)
T 1g0s_A 55 ERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASP 134 (209)
T ss_dssp ECCCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCT
T ss_pred eCCCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCC
Confidence 445688888898 5789999988765432 24789999999999999999999999999999998888887766655
Q ss_pred CCCceEEEEEEEEEecC--Cc-CcCCCccccceEEEEehhhhhcCCCc
Q 023855 181 SFFEKSDIFFLCMLRPL--SF-DIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 181 ~~~~~~~~~f~~~~~~~--~~-~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
+......++|++..... .. ....++.|..++.|++++++.++...
T Consensus 135 g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~ 182 (209)
T 1g0s_A 135 GGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE 182 (209)
T ss_dssp TTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT
T ss_pred CccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc
Confidence 55556778888865321 11 12356678889999999999886443
No 49
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.80 E-value=4.7e-19 Score=155.09 Aligned_cols=129 Identities=18% Similarity=0.223 Sum_probs=95.9
Q ss_pred CCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCC
Q 023855 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF 183 (276)
Q Consensus 104 ~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~ 183 (276)
++...++|.+++. .+++|||++|.+.+ +|.|++|||++|+||++++||+||++||||+++....+++...+...
T Consensus 136 yp~~~~~viv~v~-~~~~vLL~rr~~~~---~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~~-- 209 (269)
T 1vk6_A 136 YPQIAPCIIVAIR-RDDSILLAQHTRHR---NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFP-- 209 (269)
T ss_dssp CCCCEEEEEEEEE-ETTEEEEEEETTTC---SSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEETT--
T ss_pred cCCCCcEEEEEEE-eCCEEEEEEecCCC---CCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCCC--
Confidence 3444455544444 46899999998764 48999999999999999999999999999999998888877654432
Q ss_pred ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhhc
Q 023855 184 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKV 242 (276)
Q Consensus 184 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~~ 242 (276)
+...++|++.... ..+.+++.|+.+++|++++++..++.+ ..+.+.+++.+++++
T Consensus 210 ~~~~~~f~a~~~~--~~~~~~~~E~~~~~W~~~~el~~l~~~--~si~~~li~~~l~~~ 264 (269)
T 1vk6_A 210 QSLMTAFMAEYDS--GDIVIDPKELLEANWYRYDDLPLLPPP--GTVARRLIEDTVAMC 264 (269)
T ss_dssp EEEEEEEEEEEEE--CCCCCCTTTEEEEEEEETTSCCSCCCT--TSHHHHHHHHHHHHH
T ss_pred CEEEEEEEEEECC--CCcCCCCcceEEEEEEEHHHhhhcccC--cHHHHHHHHHHHHHH
Confidence 2456777776643 345566789999999999999998775 333444455444443
No 50
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.80 E-value=2.4e-19 Score=146.11 Aligned_cols=125 Identities=17% Similarity=0.158 Sum_probs=90.1
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEE-CCccccCCCCCHHHHHHHHHHHHhCCcceee--EEEEEEe-eccCCC
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWK-FPTGVVDEGEDICVAAVREVKEETSIDTEFV--EVLAFRQ-SHQSFF 183 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~-lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~--~~l~~~~-~~~~~~ 183 (276)
..++++++++.+++|||++|...+...+|.|+ +|||++++||++.+||+||++||||+.+... ..++... +... .
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~-~ 112 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTT-L 112 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSC-C
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCC-C
Confidence 55788888888899999998654433468999 9999999999999999999999999998774 4444443 2222 2
Q ss_pred ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCC--Cc-chHHHHHHHHH
Q 023855 184 EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQP--YV-QNQELLKYIVD 236 (276)
Q Consensus 184 ~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~--~~-~~~~~i~~~~~ 236 (276)
....++|.|.. ...+.+++.|+.+++|++++++.++. ++ .+..++..+..
T Consensus 113 ~~~~~~f~~~~---~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~ 165 (171)
T 1q27_A 113 SSFMCVYELRS---DATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRR 165 (171)
T ss_dssp SSEEEEEEEEC---CCCCCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred ccEEEEEEEEE---CCccccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHH
Confidence 23566777755 33445567889999999999998542 22 33455544443
No 51
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.80 E-value=1.5e-18 Score=145.03 Aligned_cols=131 Identities=18% Similarity=0.275 Sum_probs=85.9
Q ss_pred CcceeEEEEEEEeCCe-eEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCc-ceeeE----EEEEEee
Q 023855 105 ASHRVGVGAFVMNGKR-EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSID-TEFVE----VLAFRQS 178 (276)
Q Consensus 105 ~~~~v~v~~vv~~~~~-~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~-~~~~~----~l~~~~~ 178 (276)
....++++++|++.++ +|||++++. .|.|.+|||++++||++.+||+||++||||+. +.... .+.....
T Consensus 42 ~~~h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 116 (197)
T 3fcm_A 42 TIAHLTSSAFAVNKERNKFLMIHHNI-----YNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTV 116 (197)
T ss_dssp SSEEEEEEEEEECTTSCEEEEEEETT-----TTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEE
T ss_pred CCccEEEEEEEEECCCCEEEEEEecC-----CCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeee
Confidence 3445678888888665 999999873 47999999999999999999999999999998 44211 1111111
Q ss_pred ccC-CCc-------eEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHHhh
Q 023855 179 HQS-FFE-------KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICSAK 241 (276)
Q Consensus 179 ~~~-~~~-------~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~~~ 241 (276)
... ..+ ...++|++.... ...+.++++|+.+++|++++++.++... ...++++.+++.+.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~ 187 (197)
T 3fcm_A 117 NGHIKRGKYVSSHLHLNLTYLIECSE-DETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQ 187 (197)
T ss_dssp CCEEETTEEECCEEEEEEEEEEECCT-TSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC-
T ss_pred cCccccCcccCCceeEEEEEEEEeCC-CcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhc
Confidence 100 001 122455554432 2345567789999999999999998665 4556667666665544
No 52
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.80 E-value=3.1e-19 Score=143.59 Aligned_cols=116 Identities=18% Similarity=0.271 Sum_probs=83.0
Q ss_pred eEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEee----------
Q 023855 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQS---------- 178 (276)
Q Consensus 109 v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~---------- 178 (276)
++++++|++ +++|||++|.. .|.|.||||++++||++.+||+||++||||+++.....++....
T Consensus 2 ~~~~~vi~~-~~~vLL~~r~~-----~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 75 (156)
T 1k2e_A 2 IVTSGVLVE-NGKVLLVKHKR-----LGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPL 75 (156)
T ss_dssp EEEEEECEE-TTEEEEEECTT-----TCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCS
T ss_pred eEEEEEEEE-CCEEEEEEEcC-----CCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeecccccccccccc
Confidence 467788888 88999999874 37899999999999999999999999999999876554321110
Q ss_pred --------ccCC-CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHH
Q 023855 179 --------HQSF-FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 239 (276)
Q Consensus 179 --------~~~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~ 239 (276)
.... ......+|.|.. ...|..+++|++++++.++++. ...++++.+++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~f~~~~---------~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 137 (156)
T 1k2e_A 76 VILEEVVKYPEETHIHFDLIYLVKR---------VGGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLY 137 (156)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEE---------EEECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHH
T ss_pred eeeeeeecCCCCceEEEEEEEEEEe---------cCCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 0100 111234455543 1246788999999999988765 45666766666544
No 53
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.80 E-value=9e-19 Score=140.21 Aligned_cols=113 Identities=15% Similarity=0.175 Sum_probs=82.2
Q ss_pred CcceeEEEEEEEeCCee----EEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeecc
Q 023855 105 ASHRVGVGAFVMNGKRE----VLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ 180 (276)
Q Consensus 105 ~~~~v~v~~vv~~~~~~----vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~ 180 (276)
..+..+++++|.+ +++ |||++|...+ + +| |.||||++++||++.+||+||++||||+.+.....++......
T Consensus 5 ~~~~~~~~~ii~~-~~~~~~~vLl~~r~~~~-~-~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 80 (155)
T 2b06_A 5 QLTILTNICLIED-LETQRVVMQYRAPENNR-W-SG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPL 80 (155)
T ss_dssp GCEEEEEEEEEEE-TTTTEEEEEEEC------C-CE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEEC
T ss_pred cCcEEEEEEEEEE-CCCCeEEEEEEECCCCC-C-CC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeecc
Confidence 3456677788877 455 8888887655 2 36 9999999999999999999999999999998888887666544
Q ss_pred C-CCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 181 S-FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 181 ~-~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
. ......++|.|.... .. +...|..+++|++++++.++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~ 122 (155)
T 2b06_A 81 DTGGRYIVICYKATEFS--GT--LQSSEEGEVSWVQKDQIPNLNLA 122 (155)
T ss_dssp TTSCEEEEEEEEECEEE--EC--CCCBTTBEEEEEEGGGGGGSCBC
T ss_pred CCCceEEEEEEEEEecC--CC--CCCCcceeeEEeeHHHhhhCCCC
Confidence 2 233455666664332 12 23467889999999999998876
No 54
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.79 E-value=8.2e-20 Score=154.61 Aligned_cols=104 Identities=17% Similarity=0.201 Sum_probs=80.3
Q ss_pred eeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEEEEEEEEEecCCc
Q 023855 120 REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDIFFLCMLRPLSF 199 (276)
Q Consensus 120 ~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~ 199 (276)
++|||+++.+.+. +++.|+||||++++||++.+||+||++||||+.+.....++......+..+...++|++.+.....
T Consensus 77 ~~vlLv~q~R~~~-~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~ 155 (212)
T 2dsc_A 77 ECIVLVKQFRPPM-GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDA 155 (212)
T ss_dssp CEEEEEEEEEGGG-TEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCCEEEEEEEEEETTSG
T ss_pred cEEEEEEeecCCC-CCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCceEEEEEEEEeCccc
Confidence 5899998766543 347899999999999999999999999999999987777655554444445567777776543221
Q ss_pred -----CcCCCccccceEEEEehhhhhcCCC
Q 023855 200 -----DIQKQESEIEAAEWMPLEEYAAQPY 224 (276)
Q Consensus 200 -----~~~~~~~E~~~~~Wv~~~el~~~~~ 224 (276)
...++++|..+++|++++++.++..
T Consensus 156 ~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 156 ENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp GGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred cccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 3345678999999999999987654
No 55
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.79 E-value=1.9e-19 Score=144.11 Aligned_cols=111 Identities=19% Similarity=0.270 Sum_probs=82.6
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCC---
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFF--- 183 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~--- 183 (276)
.+++++++|++ +++|||++| +|.|.||||++++||++.+||+||++||||+.+....+++.........
T Consensus 18 ~~~~~~~ii~~-~~~vLl~~r-------~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 89 (154)
T 2pqv_A 18 FGVRATALIVQ-NHKLLVTKD-------KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVS 89 (154)
T ss_dssp EEEEEEECCEE-TTEEEEEEE-------TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTEE
T ss_pred EeEEEEEEEEE-CCEEEEEec-------CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCCc
Confidence 34667777776 689999998 2789999999999999999999999999999998877776554322211
Q ss_pred -ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc
Q 023855 184 -EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 184 -~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
....++|.|...........+++|..+++|++++++.++++.
T Consensus 90 ~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~ 132 (154)
T 2pqv_A 90 YHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLV 132 (154)
T ss_dssp EEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEE
T ss_pred ceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcC
Confidence 223456777654322211123467889999999999998776
No 56
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.79 E-value=1.9e-19 Score=152.95 Aligned_cols=132 Identities=17% Similarity=0.113 Sum_probs=86.8
Q ss_pred ecCCCCCCCCCCCcceeEEEEEEEe-CCeeEEEEEeccCCCC------------------------------CCCcEECC
Q 023855 93 WIPGGANTLPANASHRVGVGAFVMN-GKREVLVVQENSGRFR------------------------------GTGIWKFP 141 (276)
Q Consensus 93 ~~~~~~~~~p~~~~~~v~v~~vv~~-~~~~vLLvkr~~~~~~------------------------------~~~~W~lP 141 (276)
..|++.........+..+|++++++ .++++||+++.+.+.. .++.|+||
T Consensus 21 ~~~~G~~~~~e~v~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welP 100 (218)
T 3q91_A 21 QSMNGAQKSWDFMKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELC 100 (218)
T ss_dssp --------------CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECE
T ss_pred ECCCCCEEEEEEEEcCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECC
Confidence 3466665566667777889999998 4679999988654321 14799999
Q ss_pred ccccCC-CCCHHHHHHHHHHHHhCCcc--eeeEEEEEEeeccCCCceEEEEEEEEEecC----CcCcCCCccccceEEEE
Q 023855 142 TGVVDE-GEDICVAAVREVKEETSIDT--EFVEVLAFRQSHQSFFEKSDIFFLCMLRPL----SFDIQKQESEIEAAEWM 214 (276)
Q Consensus 142 gG~ve~-gEs~~eaA~REl~EEtGl~~--~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~----~~~~~~~~~E~~~~~Wv 214 (276)
||++|+ ||++.+||+||++||||+.+ ..+..++......+..+...++|++..... .....++++|+.++.|+
T Consensus 101 gG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv 180 (218)
T 3q91_A 101 AGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHL 180 (218)
T ss_dssp EEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------CCEEEEEE
T ss_pred cceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEE
Confidence 999999 99999999999999999998 677777776665555667778888876432 12345667899999999
Q ss_pred ehhhhhcCCC
Q 023855 215 PLEEYAAQPY 224 (276)
Q Consensus 215 ~~~el~~~~~ 224 (276)
+++++.++..
T Consensus 181 ~l~el~~~i~ 190 (218)
T 3q91_A 181 PLEGAQAFAD 190 (218)
T ss_dssp EGGGHHHHHH
T ss_pred EHHHHHHHHH
Confidence 9999987543
No 57
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.79 E-value=1.1e-18 Score=144.92 Aligned_cols=116 Identities=22% Similarity=0.243 Sum_probs=82.3
Q ss_pred eEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCce---
Q 023855 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEK--- 185 (276)
Q Consensus 109 v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~--- 185 (276)
..+++++.+ +++|||++|.. .|.|.+|||++++||++.+||+||++||||+.+....+++...........
T Consensus 5 ~v~~~vi~~-~~~vLL~~r~~-----~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 78 (188)
T 3fk9_A 5 RVTNCIVVD-HDQVLLLQKPR-----RGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVS 78 (188)
T ss_dssp EEEEEEEEE-TTEEEEEECTT-----TCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEE
T ss_pred EEEEEEEEE-CCEEEEEEeCC-----CCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceE
Confidence 345556665 68999999863 489999999999999999999999999999999888777665544332221
Q ss_pred --EEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHH
Q 023855 186 --SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKY 233 (276)
Q Consensus 186 --~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~ 233 (276)
..++|.|... .... ....|..+++|++++++.++++. .++.++..
T Consensus 79 ~~~~~~f~a~~~--~~~~-~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~ 126 (188)
T 3fk9_A 79 EWMLFTFKATEH--EGEM-LKQSPEGKLEWKKKDEVLELPMAAGDKWIFKH 126 (188)
T ss_dssp EEEEEEEEESCE--ESCC-CSEETTEEEEEEEGGGGGGSCCCHHHHHHHHH
T ss_pred EEEEEEEEEECC--CCCC-cCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHH
Confidence 3445555322 2222 22345578999999999998886 33343333
No 58
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.79 E-value=9.4e-19 Score=140.41 Aligned_cols=126 Identities=14% Similarity=0.239 Sum_probs=90.1
Q ss_pred ceeEEEEEEEeC---CeeEEEEEeccCCCCCCCcEECCccccCCCCCHH-HHHHHHHHHHhC-CcceeeEEEEEEeeccC
Q 023855 107 HRVGVGAFVMNG---KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDIC-VAAVREVKEETS-IDTEFVEVLAFRQSHQS 181 (276)
Q Consensus 107 ~~v~v~~vv~~~---~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~-eaA~REl~EEtG-l~~~~~~~l~~~~~~~~ 181 (276)
++..+.++|.++ +++|||++|.....+ +|.|+||||.+++||++. +||+||+.|||| +.+.....++...+..+
T Consensus 18 ~~~~~~~vi~~~~~~~~~vLl~~R~~~~~~-~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~ 96 (155)
T 1x51_A 18 EESSATCVLEQPGALGAQILLVQRPNSGLL-AGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFS 96 (155)
T ss_dssp EEEEEEEEEEEECSSSEEEEEEECCCCSTT-CSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCS
T ss_pred eEEEEEEEEEecCCCCCEEEEEECCCCCCC-CceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEecC
Confidence 444555566664 589999998865543 489999999999999996 999999999999 88876666655555444
Q ss_pred CCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHh
Q 023855 182 FFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSA 240 (276)
Q Consensus 182 ~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~ 240 (276)
+......+|.|.... .. +...|..+++|++++++.+++++. .++.+++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~--~~--~~~~e~~~~~W~~~~el~~~~~~~---~~~~~l~~~~~ 148 (155)
T 1x51_A 97 HIKLTYQVYGLALEG--QT--PVTTVPPGARWLTQEEFHTAAVST---AMKKVFRVYQG 148 (155)
T ss_dssp SCEEEEEEEEEECSS--CC--CCCCCCTTEEEEEHHHHHHSCCCH---HHHHHHHHHHH
T ss_pred CccEEEEEEEEEEcC--CC--CCCCCCCccEEccHHHhhhcCCCH---HHHHHHHHHHh
Confidence 444556677775432 12 233567789999999999998862 23344444444
No 59
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.79 E-value=1.9e-19 Score=149.55 Aligned_cols=131 Identities=14% Similarity=0.157 Sum_probs=93.4
Q ss_pred eEEEEEEEeCCeeEEEEEeccCCCCCCCcEEC-CccccCCCCCHHHHHHHHHHHHhCCcceee-EEEEEEeec---c-CC
Q 023855 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKF-PTGVVDEGEDICVAAVREVKEETSIDTEFV-EVLAFRQSH---Q-SF 182 (276)
Q Consensus 109 v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~l-PgG~ve~gEs~~eaA~REl~EEtGl~~~~~-~~l~~~~~~---~-~~ 182 (276)
.+|+++|++.+++|||++|.......+|.|.+ |||++++||++.+||+||++||||+.+... ..++.+... . ..
T Consensus 33 ~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 112 (190)
T 1hzt_A 33 LAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGI 112 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTSC
T ss_pred EEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCCC
Confidence 46888889888999999997654334699999 999999999999999999999999999877 555332221 1 11
Q ss_pred -CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc---chHHHHHHHHHHHHhhc
Q 023855 183 -FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV---QNQELLKYIVDICSAKV 242 (276)
Q Consensus 183 -~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~---~~~~~i~~~~~~~~~~~ 242 (276)
.....++|+|... ..+.+++.|+.+++|++++++.++... ...+.++.+++.++++.
T Consensus 113 ~~~~~~~~f~~~~~---~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~ 173 (190)
T 1hzt_A 113 VENEVCPVFAARTT---SALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARK 173 (190)
T ss_dssp EEEEECCEEEEEBC---SCCCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHH
T ss_pred cceEEEEEEEEecC---CCCcCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHH
Confidence 1233456666542 244556789999999999999886322 12445566666665543
No 60
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.78 E-value=4.3e-21 Score=168.42 Aligned_cols=193 Identities=19% Similarity=0.232 Sum_probs=111.7
Q ss_pred cccccccccCCcEEEecCCCCChHHHHHHHHHHH--HHHHHcCc-cEEEEEcccccccchHHHHhcCc---eeeeecCce
Q 023855 14 KFLNGINDNYGGVVVQMNEPMDPQLFASLLKSSI--SHWRQQAK-KGVWIKLPIELANLVEPAVKEGF---WFHHAEPNY 87 (276)
Q Consensus 14 ~~~~~~~d~~~g~~v~~~~~~~~~~f~~~l~~~l--~~w~~~~~-~~iw~~~~~~~~~l~~~~~~~gf---~~h~~~~~~ 87 (276)
.+.+.-.|-+.+.+||.+.. . -+....|-.+| .+|--.+. +..+-++|. +..++| .|||+.
T Consensus 12 ~~~~~l~dl~~rfi~n~p~~-~-~~~~~~~~f~ie~a~wfy~d~~~~~~~~~p~--------~~~~~f~~~~f~~~~--- 78 (271)
T 2a6t_A 12 TFSQVLDDLSARFILNLPAE-E-QSSVERLCFQIEQAHWFYEDFIRAQNDQLPS--------LGLRVFSAKLFAHCP--- 78 (271)
T ss_dssp CTHHHHHHHHHHHTTTSCGG-G-TTCHHHHHHHHHHHHHHHHHTHHHHCSSSCC--------CCHHHHHHHHHTTCH---
T ss_pred CHHHHHHHHHHHHhhcCCHH-H-hccHHHHHHHHHHHHHHHHHhhhhcccCCCc--------ccHHHHHHHHhhhhh---
Confidence 33344456666777766321 1 11123344444 56765543 221212332 333455 688887
Q ss_pred EEEEeecCCCCCCCCC---CCcceeEEEEEEEeC-CeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHh
Q 023855 88 LMLVYWIPGGANTLPA---NASHRVGVGAFVMNG-KREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEET 163 (276)
Q Consensus 88 ~~l~~~~~~~~~~~p~---~~~~~v~v~~vv~~~-~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEt 163 (276)
++.+|.+.....++. +.....+++++|++. +++|||++|.+. ++.|++|||++++||++.+||+||++|||
T Consensus 79 -~l~~~~~~~~~~~~~~~~~~~~v~~v~avv~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEs~~eAA~REl~EEt 153 (271)
T 2a6t_A 79 -LLWKWSKVHEEAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWKA----SSGWGFPKGKIDKDESDVDCAIREVYEET 153 (271)
T ss_dssp -HHHHC---CCHHHHHHHHHSCCCCEEEEEEBCSSSSEEEEEEESST----TCCCBCSEEECCTTCCHHHHHHHHHHHHH
T ss_pred -hhhcccccchhHHHHHHhcCCCCCeEEEEEEECCCCEEEEEEEeCC----CCeEECCcccCCCCcCHHHHHHHHHHHHh
Confidence 445666544333332 222334577888885 489999999763 37899999999999999999999999999
Q ss_pred CCcceeeEEEEEEeeccCCCceEEEEEEEEEecCCcCcCC-CccccceEEEEehhhhhcCCCc
Q 023855 164 SIDTEFVEVLAFRQSHQSFFEKSDIFFLCMLRPLSFDIQK-QESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 164 Gl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
|+++..+..+..+. .....+...++|++..........+ ++.|+.+++|++++++.++...
T Consensus 154 Gl~~~~l~~~~~~~-~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 154 GFDCSSRINPNEFI-DMTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp CCCCTTTCCTTCEE-EEEETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred CCCceeeeeeeeec-cCCcCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 99987533221111 1111233556677754433322232 5688999999999999987654
No 61
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.77 E-value=3.7e-18 Score=138.67 Aligned_cols=113 Identities=19% Similarity=0.272 Sum_probs=78.3
Q ss_pred eEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEEE
Q 023855 109 VGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDI 188 (276)
Q Consensus 109 v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 188 (276)
+.+++++++.++++||++|+ +|.|.||||++++||++.+||+||++||||+.+.....++...... ...+
T Consensus 16 ~~~~~~ii~~~~~vLL~~r~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~----~~~~ 85 (163)
T 3f13_A 16 ARRATAIIEMPDGVLVTASR------GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPF----NAHK 85 (163)
T ss_dssp EEEEEEECEETTEEEEEECC---------BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSS----EEEE
T ss_pred eEEEEEEEEeCCEEEEEEEC------CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCC----eEEE
Confidence 44555555557889999886 2789999999999999999999999999999998888776543322 5566
Q ss_pred EEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHH
Q 023855 189 FFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVD 236 (276)
Q Consensus 189 ~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~ 236 (276)
+|+|.. ...+.+. +|+.+++|++ .+...+.+. .+..++..+.+
T Consensus 86 ~f~~~~---~~~~~~~-~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~ 129 (163)
T 3f13_A 86 VYLCIA---QGQPKPQ-NEIERIALVS-SPDTDMDLFVEGRAILRRYAR 129 (163)
T ss_dssp EEEEEC----CCCCCC-TTCCEEEEES-STTCSSCBCHHHHHHHHHHHH
T ss_pred EEEEEE---CCcCccC-CCceEEEEEC-cccccCCCCHHHHHHHHHHHH
Confidence 777754 2333333 4889999999 444444444 34454444433
No 62
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.9e-19 Score=140.94 Aligned_cols=110 Identities=25% Similarity=0.347 Sum_probs=76.2
Q ss_pred EEEEEEEeCC-eeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEEE
Q 023855 110 GVGAFVMNGK-REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSDI 188 (276)
Q Consensus 110 ~v~~vv~~~~-~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 188 (276)
.++++|++.+ ++|||++|.. +|.|.||||++++||++.+||+||++||||+.+.....+..+.... ..+...+
T Consensus 6 ~~~~~i~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~-~~~~~~~ 79 (146)
T 2jvb_A 6 VRGAAIFNENLSKILLVQGTE-----SDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERN-IQGKNYK 79 (146)
T ss_dssp CEEEEEBCTTSSEEEEECCSS-----SSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEE-ETTEEEE
T ss_pred EEEEEEEeCCCCEEEEEEEcC-----CCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccc-cCCceEE
Confidence 4677788865 8999998763 4889999999999999999999999999999886432221111111 1223344
Q ss_pred EEEEEEecCCcCcCC-CccccceEEEEehhhhhcCCCc
Q 023855 189 FFLCMLRPLSFDIQK-QESEIEAAEWMPLEEYAAQPYV 225 (276)
Q Consensus 189 ~f~~~~~~~~~~~~~-~~~E~~~~~Wv~~~el~~~~~~ 225 (276)
+|++..........+ .+.|+.+++|++++++.++...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 80 IFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp EEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGC
T ss_pred EEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhcc
Confidence 555432222222222 3678999999999999987654
No 63
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.77 E-value=1.7e-18 Score=144.18 Aligned_cols=116 Identities=16% Similarity=0.084 Sum_probs=87.2
Q ss_pred ceeEEEEEEEeC-CeeEEEEEeccCCC----C-CCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeecc
Q 023855 107 HRVGVGAFVMNG-KREVLVVQENSGRF----R-GTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQ 180 (276)
Q Consensus 107 ~~v~v~~vv~~~-~~~vLLvkr~~~~~----~-~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~ 180 (276)
+..+|++++++. ++++||+++.+.+. . +++.|+||||+++ ||++.+||+||++||||+.+.....++......
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~ 122 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSP 122 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCT
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCC
Confidence 445788888884 68999998876431 0 3478999999999 999999999999999999998888888777666
Q ss_pred CCCceEEEEEEEEEecCCcC--cCCCccccceEEEEehhhhhcCC
Q 023855 181 SFFEKSDIFFLCMLRPLSFD--IQKQESEIEAAEWMPLEEYAAQP 223 (276)
Q Consensus 181 ~~~~~~~~~f~~~~~~~~~~--~~~~~~E~~~~~Wv~~~el~~~~ 223 (276)
+......++|++........ ....+.|+.+++|++++++.++.
T Consensus 123 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 167 (191)
T 3o6z_A 123 GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMI 167 (191)
T ss_dssp TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHH
T ss_pred CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHH
Confidence 66667778888865432110 01126889999999999998864
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.76 E-value=1.1e-17 Score=150.68 Aligned_cols=129 Identities=20% Similarity=0.280 Sum_probs=85.4
Q ss_pred CCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEE------EEEe
Q 023855 104 NASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVL------AFRQ 177 (276)
Q Consensus 104 ~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l------~~~~ 177 (276)
++...++|+++|++ +++|||++|...+ ++|.|.+|||++|+||++.+||+||++||||+++....++ ..+.
T Consensus 199 ~~~~~~~v~~vi~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~ 275 (341)
T 2qjo_A 199 YAPTFITTDAVVVQ-AGHVLMVRRQAKP--GLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFD 275 (341)
T ss_dssp SCCCEEEEEEEEEE-TTEEEEEECCSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEEC
T ss_pred CCCCceEEEEEEEe-CCEEEEEEecCCC--CCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEe
Confidence 34556778888885 6899999998754 3689999999999999999999999999999998754332 2222
Q ss_pred eccCC--CceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcC--CCc-chHHHHHHHH
Q 023855 178 SHQSF--FEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ--PYV-QNQELLKYIV 235 (276)
Q Consensus 178 ~~~~~--~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~--~~~-~~~~~i~~~~ 235 (276)
..... .....++|++...........+++|+.+++|++++++.++ .+. .+..++..++
T Consensus 276 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~ 338 (341)
T 2qjo_A 276 APGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFV 338 (341)
T ss_dssp CTTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC
T ss_pred CCCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHH
Confidence 11111 1234567777654322112245688999999999999997 443 4455555443
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.75 E-value=1.8e-17 Score=150.13 Aligned_cols=133 Identities=18% Similarity=0.301 Sum_probs=92.1
Q ss_pred CCCcceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeE----EE--EEE
Q 023855 103 ANASHRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVE----VL--AFR 176 (276)
Q Consensus 103 ~~~~~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~----~l--~~~ 176 (276)
.++...++|+++|++ +++|||++|...+ ++|.|++|||++++||++.+||+||++||||+++.... +. ..+
T Consensus 203 ~~~~~~~~v~~vv~~-~~~vLL~~r~~~~--~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~ 279 (352)
T 2qjt_B 203 PFKPNFVTVDALVIV-NDHILMVQRKAHP--GKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVF 279 (352)
T ss_dssp SSCCEEEEEEEEEEE-TTEEEEEEESSSS--STTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEE
T ss_pred CCCCCceEEEEEEEE-CCEEEEEEEcCCC--CCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEe
Confidence 345556778888875 7899999998765 45899999999999999999999999999999987432 11 222
Q ss_pred eeccCC--CceEEEEEEEEEecCCcCcC-CCccccceEEEEeh-hhhhcC--CCc-chHHHHHHHHHHH
Q 023855 177 QSHQSF--FEKSDIFFLCMLRPLSFDIQ-KQESEIEAAEWMPL-EEYAAQ--PYV-QNQELLKYIVDIC 238 (276)
Q Consensus 177 ~~~~~~--~~~~~~~f~~~~~~~~~~~~-~~~~E~~~~~Wv~~-~el~~~--~~~-~~~~~i~~~~~~~ 238 (276)
...... .....++|++.+......+. .++.|+.+++|+++ +++.++ .+. .+..++..+++.+
T Consensus 280 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l 348 (352)
T 2qjt_B 280 DYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEEC 348 (352)
T ss_dssp CCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHT
T ss_pred cCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHh
Confidence 211111 12355677776643321122 34688999999999 999987 333 4566666655543
No 66
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.72 E-value=6.8e-17 Score=147.39 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=84.8
Q ss_pred CCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCC-------------Cc
Q 023855 118 GKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSF-------------FE 184 (276)
Q Consensus 118 ~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~-------------~~ 184 (276)
++.+|||++|.. .+.|.||||++|+||++.+||+||++||||+++....+++........ ..
T Consensus 36 ~~~~vLLv~r~~-----~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~ 110 (364)
T 3fjy_A 36 DSIEVCIVHRPK-----YDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADT 110 (364)
T ss_dssp TTEEEEEEEETT-----TTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC--------------------
T ss_pred CceEEEEEEcCC-----CCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCc
Confidence 345999999963 389999999999999999999999999999999888887765443321 13
Q ss_pred eEEEEEEEEEecCC----------cCcCCCccccceEEEEehhhhhcCCCc-chHHHHHHHHHHHH
Q 023855 185 KSDIFFLCMLRPLS----------FDIQKQESEIEAAEWMPLEEYAAQPYV-QNQELLKYIVDICS 239 (276)
Q Consensus 185 ~~~~~f~~~~~~~~----------~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~~~~i~~~~~~~~ 239 (276)
...++|++...... .....+++|+.+++|++++++.++... ..+.+++.+++.+.
T Consensus 111 ~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~~~r~il~~~~~~l~ 176 (364)
T 3fjy_A 111 KHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDRVQ 176 (364)
T ss_dssp -CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcchhhHHHHHHHHHHhc
Confidence 55677777654321 112356689999999999999987654 55666666666554
No 67
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.71 E-value=1.3e-17 Score=140.40 Aligned_cols=111 Identities=22% Similarity=0.229 Sum_probs=76.1
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCC--CCCCcEEC-CccccCCCCC--H----HHHHHHHHHHHhCCcceeeEEEEEEe
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRF--RGTGIWKF-PTGVVDEGED--I----CVAAVREVKEETSIDTEFVEVLAFRQ 177 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~--~~~~~W~l-PgG~ve~gEs--~----~eaA~REl~EEtGl~~~~~~~l~~~~ 177 (276)
+.+...+ |+..+|+|||++|...+. ...+.|.+ |||++|+||+ + .+||+||++||||+++....+++...
T Consensus 67 ~q~i~~~-II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~ 145 (211)
T 3e57_A 67 KQVIPYV-VIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLIN 145 (211)
T ss_dssp EEEEEEE-EEEETTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEE
T ss_pred cceEEEE-EEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEe
Confidence 3343444 444578999999986541 02378999 9999999999 4 99999999999999998888888876
Q ss_pred eccCCCc--eEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcC
Q 023855 178 SHQSFFE--KSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 222 (276)
Q Consensus 178 ~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 222 (276)
......+ ....+|.|... . ..+.+.|..+++|++++++.++
T Consensus 146 ~~~~~~~~~~l~~~f~~~~~--~--g~~~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 146 SSTTEVSRVHLGALFLGRGK--F--FSVKEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp CCSSHHHHTEEEEEEEEEEE--E--EEESCTTTCEEEEEEHHHHHHH
T ss_pred ccCCCCCeEEEEEEEEEEeC--C--ceeCCCCeEEEEEEEHHHHHHh
Confidence 5322111 23356777643 2 2245577889999999999987
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.70 E-value=1.1e-16 Score=146.19 Aligned_cols=123 Identities=16% Similarity=0.103 Sum_probs=94.3
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcceeeEEEEEEeeccCCCceEE
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDTEFVEVLAFRQSHQSFFEKSD 187 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 187 (276)
...++++|.|.+|+|||+||.....+ +|.|+||||++|+| ++.+|++||+.||||+.+.....++...+..+++....
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~g~~-~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~ 317 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDSTGLL-ANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQL 317 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSSSTT-TTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEE
T ss_pred EEEEEEEEEeCCCEEEEEECCCCCCc-CCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEE
Confidence 34455566667899999999876554 49999999999999 99999999999999999988777777666666666677
Q ss_pred EEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhhc
Q 023855 188 IFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKV 242 (276)
Q Consensus 188 ~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~~ 242 (276)
.+|.+..... ..|..+++|++++++.+++++ ...+.+++.+.+..
T Consensus 318 ~~~~~~~~~~-------~~e~~~~~Wv~~~el~~~~l~---~~~~~il~~l~~~~ 362 (369)
T 3fsp_A 318 TVFPGRLVHG-------GPVEEPYRLAPEDELKAYAFP---VSHQRVWREYKEWA 362 (369)
T ss_dssp EEEEEEECCS-------SCCCTTEEEEEGGGGGGSCCC---HHHHHHHHHHHHHT
T ss_pred EEEEEEEcCC-------CCCccccEEeeHHHhhhCCCC---HHHHHHHHHHHHHh
Confidence 7787765432 357788999999999999886 22334444444433
No 69
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.68 E-value=2.9e-16 Score=134.89 Aligned_cols=113 Identities=19% Similarity=0.247 Sum_probs=83.7
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECC-ccccCCC------CC---HHHHHHHHHHHHhCCccee-----eE
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFP-TGVVDEG------ED---ICVAAVREVKEETSIDTEF-----VE 171 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lP-gG~ve~g------Es---~~eaA~REl~EEtGl~~~~-----~~ 171 (276)
...+++++|++.+|+|||+||...+...+|.|++| ||++++| |+ +.+||+||++||||+.+.. ..
T Consensus 58 ~h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~ 137 (235)
T 2dho_A 58 LHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEIN 137 (235)
T ss_dssp CEEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSE
T ss_pred eEEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcE
Confidence 34568888999889999999987665567999999 5999999 88 5999999999999998752 35
Q ss_pred EEEEEeecc-C--CC--ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcC
Q 023855 172 VLAFRQSHQ-S--FF--EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 222 (276)
Q Consensus 172 ~l~~~~~~~-~--~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 222 (276)
.++.+.+.. . .. +...++|++.. ...+.++++|+.+++|++++++.++
T Consensus 138 ~l~~~~y~~~~~~~~~~~e~~~vf~~~~---~~~~~~~~~Ev~~~~wv~~~el~~~ 190 (235)
T 2dho_A 138 YLTRIHYKAQSDGIWGEHEIDYILLVRM---NVTLNPDPNEIKSYCYVSKEELKEL 190 (235)
T ss_dssp EEEEEEEEEECSSSBEEEEEEEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEEEeccCCCccceeEEEEEEEEEE---CCCCcCChHHEEEEEEEcHHHHHHH
Confidence 555443221 1 11 12345666653 2345667899999999999999774
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.67 E-value=3.6e-16 Score=135.12 Aligned_cols=112 Identities=16% Similarity=0.184 Sum_probs=83.3
Q ss_pred eeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCc-cccCCC------CCH---HHHHHHHHHHHhCCccee-----eEE
Q 023855 108 RVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPT-GVVDEG------EDI---CVAAVREVKEETSIDTEF-----VEV 172 (276)
Q Consensus 108 ~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPg-G~ve~g------Es~---~eaA~REl~EEtGl~~~~-----~~~ 172 (276)
..++.++|++.+|+|||+||...+...+|.|++|+ |++++| |++ .+||+||++||||+.+.. ...
T Consensus 70 h~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~ 149 (246)
T 2pny_A 70 HRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVF 149 (246)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEE
T ss_pred EEEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccEE
Confidence 45678888998899999999876655689999995 999999 887 999999999999998652 345
Q ss_pred EEEEeecc-C--CC--ceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcC
Q 023855 173 LAFRQSHQ-S--FF--EKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 222 (276)
Q Consensus 173 l~~~~~~~-~--~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 222 (276)
++.+.+.. . .. +...++|++.. ...+.++++|+.+++|++++++.++
T Consensus 150 l~~~~y~~~~~~~~~~~e~~~vf~~~~---~~~~~~~~~Ev~~~~wv~~eel~~~ 201 (246)
T 2pny_A 150 MTIYHHKAKSDRIWGEHEICYLLLVRK---NVTLNPDPSETKSILYLSQEELWEL 201 (246)
T ss_dssp EEEEEEEEESSSSBEEEEEEEEEEEEC---CCCCCCCTTTEEEEEEECHHHHHHH
T ss_pred EEEEEEEecCCCceeeeEEEEEEEEEE---CCCCCCChHHeeEEEEEeHHHHHHH
Confidence 55433221 1 11 22345566653 2345677899999999999999774
No 71
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.62 E-value=3.5e-16 Score=132.33 Aligned_cols=105 Identities=18% Similarity=0.171 Sum_probs=77.1
Q ss_pred EEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCC-CHHHHHHHHHHHHhCCcceeeE-----EEEEEeeccCCCc
Q 023855 111 VGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSIDTEFVE-----VLAFRQSHQSFFE 184 (276)
Q Consensus 111 v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gE-s~~eaA~REl~EEtGl~~~~~~-----~l~~~~~~~~~~~ 184 (276)
+.+++++.+++|||++|. +|.|+||||++++|| ++.+||+||++||||+.+.... .++....... ..
T Consensus 47 vv~~i~~~~~~vLl~~r~------~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~ 119 (212)
T 1u20_A 47 KLFDRVPIRRVLLMMMRF------DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QK 119 (212)
T ss_dssp EETTTEECCEEEEEEEET------TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SC
T ss_pred EEEEEEecCCEEEEEEeC------CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-Cc
Confidence 444556778899999883 388999999999999 9999999999999999987553 4544444333 45
Q ss_pred eEEEEEEEEEecCCc--------CcCCCccccceEEEEehhhhhcC
Q 023855 185 KSDIFFLCMLRPLSF--------DIQKQESEIEAAEWMPLEEYAAQ 222 (276)
Q Consensus 185 ~~~~~f~~~~~~~~~--------~~~~~~~E~~~~~Wv~~~el~~~ 222 (276)
...++|+|....... ....++.|..++.|+|++++.+.
T Consensus 120 ~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 120 CVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp EEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 677788886532111 11224467889999999999764
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.57 E-value=5.5e-14 Score=124.26 Aligned_cols=179 Identities=12% Similarity=0.129 Sum_probs=109.5
Q ss_pred CcEEEecCCCCChHHHHHHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCceEEEEeecCCCCCCCCC
Q 023855 24 GGVVVQMNEPMDPQLFASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIPGGANTLPA 103 (276)
Q Consensus 24 ~g~~v~~~~~~~~~~f~~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~~~~~~~~~~p~ 103 (276)
++|++... ..+.++=.+.|+..+..|+..+.=.=| +.+....... .| ......+ +.. ..+.
T Consensus 53 ~~v~l~~~-~~~~~~rt~~~~~~~~~~~~~g~~~gw---r~E~~~V~~~---~~------~~~~~~~----eR~--~~~~ 113 (300)
T 3dup_A 53 DAVLLSAS-LRTPQSRTRAVADVVDRLADEGVVPAP---RGELYRVNQS---WG------EPTLMLL----DRA--VVPT 113 (300)
T ss_dssp SEEEECTT-CCSHHHHHHHHHHHHHHHHHTTSSCCC---CSCEEEECSS---TT------SCCCEEE----EGG--GTGG
T ss_pred CEEEEecC-CCCHHHHHHHHHHHHHHHHHcCCCCcc---ccccEEeecC---CC------CeeeEEE----Ehh--hccc
Confidence 34555432 356777788899888999998631001 1111111000 00 0111121 111 1111
Q ss_pred CCcceeEEEEEEEeCCe---eEEEEEeccCCCCCCCcE-ECCccccCCCCCHHHHHHHHHHHHhCCcceee---EEEEEE
Q 023855 104 NASHRVGVGAFVMNGKR---EVLVVQENSGRFRGTGIW-KFPTGVVDEGEDICVAAVREVKEETSIDTEFV---EVLAFR 176 (276)
Q Consensus 104 ~~~~~v~v~~vv~~~~~---~vLLvkr~~~~~~~~~~W-~lPgG~ve~gEs~~eaA~REl~EEtGl~~~~~---~~l~~~ 176 (276)
......+|.+.+++.++ ++||.||...+...+|.| .+|||++++||++.+||+||+.||+|+.+... ...+.+
T Consensus 114 ~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i 193 (300)
T 3dup_A 114 FGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAI 193 (300)
T ss_dssp GTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEE
T ss_pred cceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceE
Confidence 22234567777777666 999999998888789999 58999999999999999999999999987532 223222
Q ss_pred ee----ccCCCceEEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcC
Q 023855 177 QS----HQSFFEKSDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQ 222 (276)
Q Consensus 177 ~~----~~~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 222 (276)
.. ..+......++|.+.+. ....+.++++|+.+++|++++|+.++
T Consensus 194 ~y~~~~~~G~~~E~~~vy~~~l~-~~~~p~~~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 194 TYCMESPAGIKPDTLFLYDLALP-EDFRPHNTDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp EEEEEETTEEEEEEEEEEEEECC-TTCCCCCTTSSEEEEEEEEHHHHHHH
T ss_pred EEEEecCCCeEEEEEEEEEEEec-CCCcCCCCchHhheEEEECHHHHHHH
Confidence 11 11112223344444433 23345678899999999999998764
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.55 E-value=1.2e-13 Score=122.10 Aligned_cols=113 Identities=13% Similarity=0.185 Sum_probs=73.4
Q ss_pred eEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhCCcc------------eeeEEE--------EEEeecc
Q 023855 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETSIDT------------EFVEVL--------AFRQSHQ 180 (276)
Q Consensus 121 ~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtGl~~------------~~~~~l--------~~~~~~~ 180 (276)
+|||++|.. .|.|.||||++++||++.+||+||++||||+.+ ....++ .......
T Consensus 140 ~vLl~~r~~-----~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dp 214 (292)
T 1q33_A 140 QFVAIKRKD-----CGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDP 214 (292)
T ss_dssp EEEEEECTT-----TCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCT
T ss_pred EEEEEEecC-----CCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCC
Confidence 699999874 378999999999999999999999999999983 111111 1111111
Q ss_pred CC--C-ceEEEEEEEEEecCC---cCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHH
Q 023855 181 SF--F-EKSDIFFLCMLRPLS---FDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICS 239 (276)
Q Consensus 181 ~~--~-~~~~~~f~~~~~~~~---~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~ 239 (276)
.. . ....++|.+...... .......+|+.+++|++++++.++.. .+..+++.+++.+.
T Consensus 215 r~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L~~-~h~~il~~~~~~~~ 278 (292)
T 1q33_A 215 RNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKLYA-SHSQFIKLVAEKRD 278 (292)
T ss_dssp TCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCCST-THHHHHHHHHHHHT
T ss_pred CCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCcccCH-hHHHHHHHHHHHhc
Confidence 11 0 123445555432211 11123457899999999999998644 34677777666543
No 74
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=8e-13 Score=112.95 Aligned_cols=113 Identities=24% Similarity=0.297 Sum_probs=77.2
Q ss_pred ceeEEEEEEEeC--C--eeEEEEEeccCCCCCCCcEECCccccCCCCC--------------------HHHHHHHHHHHH
Q 023855 107 HRVGVGAFVMNG--K--REVLVVQENSGRFRGTGIWKFPTGVVDEGED--------------------ICVAAVREVKEE 162 (276)
Q Consensus 107 ~~v~v~~vv~~~--~--~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs--------------------~~eaA~REl~EE 162 (276)
.+.++.++++++ + .+|||+||.......+|.|.||||++|+||+ +..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 355666666663 2 3899999987764457999999999999987 589999999999
Q ss_pred hCCcceee------------------------------------------EEEEEEeeccCC-CceEEEEEEEEEecCCc
Q 023855 163 TSIDTEFV------------------------------------------EVLAFRQSHQSF-FEKSDIFFLCMLRPLSF 199 (276)
Q Consensus 163 tGl~~~~~------------------------------------------~~l~~~~~~~~~-~~~~~~~f~~~~~~~~~ 199 (276)
||+.+... ..+......... ......+|++.+. ...
T Consensus 87 ~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lp-q~~ 165 (232)
T 3qsj_A 87 IGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQ-HLG 165 (232)
T ss_dssp HSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECS-SCC
T ss_pred hCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECC-CCC
Confidence 99975321 111111111111 2234567777654 211
Q ss_pred CcCCCccccceEEEEehhhhh
Q 023855 200 DIQKQESEIEAAEWMPLEEYA 220 (276)
Q Consensus 200 ~~~~~~~E~~~~~Wv~~~el~ 220 (276)
....+..|+.+++|++++++.
T Consensus 166 ~v~~d~~E~~~~~W~~p~eal 186 (232)
T 3qsj_A 166 EPRLHGAELDAALWTPARDML 186 (232)
T ss_dssp CCCCCSSSEEEEEEEEHHHHH
T ss_pred CCCCCCCceEEEEEEcHHHHH
Confidence 124577999999999999995
No 75
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.41 E-value=1.4e-12 Score=116.48 Aligned_cols=114 Identities=10% Similarity=0.144 Sum_probs=83.5
Q ss_pred ceeEEEEEEEeCCeeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHh-CCcceeeEEEEEEeeccCCCce
Q 023855 107 HRVGVGAFVMNGKREVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEET-SIDTEFVEVLAFRQSHQSFFEK 185 (276)
Q Consensus 107 ~~v~v~~vv~~~~~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEt-Gl~~~~~~~l~~~~~~~~~~~~ 185 (276)
+++.|++++.+ +|+|||+ . ..| |.+|||.++ ++..++|+||++||| |++++...+++.++... .+.
T Consensus 182 p~~~vgaii~~-~g~vLL~--~-----~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~~L~~v~~~~~--~~~ 248 (321)
T 3rh7_A 182 GEIRLGAVLEQ-QGAVFLA--G-----NET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIGFLYSVYEDKS--DGR 248 (321)
T ss_dssp SCEEEEEEEES-SSCEEEB--C-----SSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEEEEEEEEECTT--TCC
T ss_pred CcceEEEEEEE-CCEEEEe--e-----CCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeeceEEEEEEcCC--Cce
Confidence 56777776665 6899999 2 237 999988664 444469999999997 99999999888877654 334
Q ss_pred EEEEEEEEEecCCcCcCCCccccceEEEEehhhhhcCCCcchHHHHHHHHHHHHhhccc
Q 023855 186 SDIFFLCMLRPLSFDIQKQESEIEAAEWMPLEEYAAQPYVQNQELLKYIVDICSAKVDT 244 (276)
Q Consensus 186 ~~~~f~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (276)
..++|.|+..... ..+++|+++++++.+.+. .+-++.+++++++....
T Consensus 249 ~~i~f~~~~~~g~---------~~e~~~f~~~elp~~~~~--~~~~~~~L~~y~~e~~~ 296 (321)
T 3rh7_A 249 QNIVYHALASDGA---------PRQGRFLRPAELAAAKFS--SSATADIINRFVLESSI 296 (321)
T ss_dssp EEEEEEEEECSSC---------CSSSEEECHHHHTTCEES--SHHHHHHHHHHHHTTSC
T ss_pred EEEEEEEEeCCCC---------eeeeEEECHHHCCCcccC--CHHHHHHHHHHHHHhhc
Confidence 5678888764321 267899999999988553 34456677777765544
No 76
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.41 E-value=1.7e-13 Score=116.23 Aligned_cols=95 Identities=22% Similarity=0.217 Sum_probs=65.1
Q ss_pred eEEEEEeccCCCCCCCcEECCccccCCCC-CHHHHHHHHHHHHhCCccee--eEEEEEEee-ccCCCceEEEEEEEEEec
Q 023855 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSIDTEF--VEVLAFRQS-HQSFFEKSDIFFLCMLRP 196 (276)
Q Consensus 121 ~vLLvkr~~~~~~~~~~W~lPgG~ve~gE-s~~eaA~REl~EEtGl~~~~--~~~l~~~~~-~~~~~~~~~~~f~~~~~~ 196 (276)
++||+.|. ++.|+||||++|+|| ++.+||+||++||||+.+.. +..+..... .........++|++.+..
T Consensus 66 ~~ll~~r~------~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~ 139 (217)
T 2xsq_A 66 AILMQMRF------DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTL 139 (217)
T ss_dssp EEEEEEET------TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCH
T ss_pred cEEEEEcc------CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEecc
Confidence 56666654 378999999999999 99999999999999999873 222222211 111234567778776543
Q ss_pred CCc--------CcCCCccccceEEEEehhhhhc
Q 023855 197 LSF--------DIQKQESEIEAAEWMPLEEYAA 221 (276)
Q Consensus 197 ~~~--------~~~~~~~E~~~~~Wv~~~el~~ 221 (276)
... .......|..++.|+|++++.+
T Consensus 140 ~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 140 EELLAVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp HHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred ccceecccccccccccCCceeeEEEEEHHHhhh
Confidence 211 0123346889999999999873
No 77
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.08 E-value=7.7e-11 Score=96.24 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=62.8
Q ss_pred eEEEEEeccCCCCCCCcEECCccccCCCC-CHHHHHHHHHHHHhCC-cceeeEEEEEEeeccCCCceEEEEEEEEEecCC
Q 023855 121 EVLVVQENSGRFRGTGIWKFPTGVVDEGE-DICVAAVREVKEETSI-DTEFVEVLAFRQSHQSFFEKSDIFFLCMLRPLS 198 (276)
Q Consensus 121 ~vLLvkr~~~~~~~~~~W~lPgG~ve~gE-s~~eaA~REl~EEtGl-~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~ 198 (276)
.|||+.|. .|.|+||||+||+|| |+++|+.||+.||+|+ .+....++........ .....++|.|++....
T Consensus 45 ~iLmQ~R~------~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp-~~V~LHfY~crl~~Ge 117 (214)
T 3kvh_A 45 SVLMQMRF------DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGP-HRVVAHLYARQLTLEQ 117 (214)
T ss_dssp EEEEEEET------TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC-----CEEEEEEEEECCHHH
T ss_pred eEEEeeee------CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCC-CEEEEEEEEEEeeCCc
Confidence 36666665 389999999999999 9999999999999997 5666666655444433 3567888999764321
Q ss_pred c--------CcCCCccccceEEEEehhhhhc
Q 023855 199 F--------DIQKQESEIEAAEWMPLEEYAA 221 (276)
Q Consensus 199 ~--------~~~~~~~E~~~~~Wv~~~el~~ 221 (276)
. .-.--..|.....-||+=.+.+
T Consensus 118 ~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D 148 (214)
T 3kvh_A 118 LHAVEISAVHSRDHGLEVLGLVRVPLYTQKD 148 (214)
T ss_dssp HHHHHHHHHTSTTBTTTEEEEEEECCCBCTT
T ss_pred cchhhhcccCCcccCceecceEEeeeEEecc
Confidence 0 1111235777788888866553
No 78
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.04 E-value=1.7e-09 Score=89.33 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=48.5
Q ss_pred eeEEEEEEE-eCC--eeEEEEEeccCCCCCCCcEECCccccCCCCCHHHHHHHHHHHHhC------CcceeeEEEEEEe
Q 023855 108 RVGVGAFVM-NGK--REVLVVQENSGRFRGTGIWKFPTGVVDEGEDICVAAVREVKEETS------IDTEFVEVLAFRQ 177 (276)
Q Consensus 108 ~v~v~~vv~-~~~--~~vLLvkr~~~~~~~~~~W~lPgG~ve~gEs~~eaA~REl~EEtG------l~~~~~~~l~~~~ 177 (276)
+++|.++++ ++. .+|||+|+.. +.|.||||.+++||+..+|+.||+.||+| ...+..+.++...
T Consensus 58 R~sV~avil~~~~~~phVLLlq~~~------~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~ww 130 (208)
T 3bho_A 58 RRTVEGVLIVHEHRLPHVLLLQLGT------TFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWW 130 (208)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEET------TEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEEEE
T ss_pred ceEEEEEEEEcCCCCcEEEEEEcCC------CcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEEEe
Confidence 344555544 433 3799999852 68999999999999999999999999999 5566667777643
No 79
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=36.89 E-value=1.1e+02 Score=22.66 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCceEEEE
Q 023855 40 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLV 91 (276)
Q Consensus 40 ~~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~~~~l~ 91 (276)
++.|+..+...+..+.+.|++.+............+.||.......+...|.
T Consensus 129 ~~Ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~~~~~~~~~~~m~ 180 (183)
T 3fix_A 129 KTLLLEAEKIMKKKGILECRLYVHRQNSVGFSFYYKNGFKVEDTDGSDFIME 180 (183)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSEEEEE
T ss_pred HHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHHHcCCEEecccccchhhc
Confidence 4445555556667788899999988888888888889999877766655544
No 80
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1
Probab=31.67 E-value=1.4e+02 Score=21.71 Aligned_cols=51 Identities=10% Similarity=-0.002 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCceEEEEee
Q 023855 42 LLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYW 93 (276)
Q Consensus 42 ~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~~ 93 (276)
.|+..+..-+..+ +.|++.+..........-.+.||........|+.|.+.
T Consensus 106 Ll~~~~~~~~~~g-~~i~l~v~~~N~~A~~fY~k~GF~~~~~~~~~~~m~~~ 156 (159)
T 1wwz_A 106 LLITCLDFLGKYN-DTIELWVGEKNYGAMNLYEKFGFKKVGKSGIWVRMIKR 156 (159)
T ss_dssp HHHHHHHHHHTTC-SEEEEEEETTCHHHHHHHHHTTCEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhcC-CEEEEEEeCCCHHHHHHHHHCCCEEccccccHHHHHHh
Confidence 3444444455666 88988888777666666678999988777777766553
No 81
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=25.94 E-value=1.7e+02 Score=24.53 Aligned_cols=55 Identities=7% Similarity=0.020 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCceEEEEeecC
Q 023855 41 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWIP 95 (276)
Q Consensus 41 ~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~~~~ 95 (276)
+.++..+..-+..+.+.|++.+..++.......-+.||...+...+++.+...++
T Consensus 252 ~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~~~~~~~~~~l~ 306 (333)
T 4ava_A 252 FLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQREDVGVITTMIDVP 306 (333)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCCCEECSTTEEEEEEECC
T ss_pred HHHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCceeccCCCEEEEEEecC
Confidence 3455555555667889999999999988888888999998877777777665554
No 82
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=25.57 E-value=1.9e+02 Score=20.77 Aligned_cols=44 Identities=16% Similarity=0.187 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeec
Q 023855 41 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAE 84 (276)
Q Consensus 41 ~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~ 84 (276)
+.+...+...+..+.+.|++.+............+.||..-...
T Consensus 83 ~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~~~~ 126 (160)
T 2cnt_A 83 MLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIR 126 (160)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCEEEEEE
Confidence 34444445556677888998888887777777788999765443
No 83
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=25.21 E-value=4.1 Score=31.01 Aligned_cols=42 Identities=17% Similarity=0.330 Sum_probs=27.6
Q ss_pred eEEEEeecCCC-CCCCCCCCcceeEEEEEEEeCCeeEEEEEec
Q 023855 87 YLMLVYWIPGG-ANTLPANASHRVGVGAFVMNGKREVLVVQEN 128 (276)
Q Consensus 87 ~~~l~~~~~~~-~~~~p~~~~~~v~v~~vv~~~~~~vLLvkr~ 128 (276)
|.+|++|-... ...+|++.......-++|+|++|++|..+|.
T Consensus 17 fysLAqW~~nkl~I~~P~n~~~n~ptLvlIYDe~G~lLW~qr~ 59 (148)
T 3bqa_A 17 FYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRD 59 (148)
T ss_dssp HHHHCEEETTEEECCCCHHHHTTCSCEEEEECTTSCEEEESSC
T ss_pred heeHhhhcCCceeEeCCCcccCCCCeEEEEEcCCCcEEEecCc
Confidence 33556665532 3445555444444668899999999999885
No 84
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=23.28 E-value=2.1e+02 Score=20.44 Aligned_cols=50 Identities=6% Similarity=-0.045 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCceEEE
Q 023855 41 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLML 90 (276)
Q Consensus 41 ~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~~~~l 90 (276)
+.+...+..-+..+.+.|++.+............+.||.......++...
T Consensus 110 ~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~ 159 (164)
T 3eo4_A 110 HSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGFKKTKKGRENEWI 159 (164)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSTTEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCCEEEeeechhhhh
Confidence 34444444456677899999999998888888889999998888776654
No 85
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=21.63 E-value=2.3e+02 Score=20.35 Aligned_cols=54 Identities=9% Similarity=0.020 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCceEEEEeec
Q 023855 41 SLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPNYLMLVYWI 94 (276)
Q Consensus 41 ~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~~~~l~~~~ 94 (276)
+.|+..+..-+..+.+.|++.+..........-.+.||.......++..+.+-+
T Consensus 123 ~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~~~~~~~~~~~ek~l 176 (179)
T 2oh1_A 123 QMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQFSGKKNGFYLYQKEL 176 (179)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcHHHHHHHHHCCCEEecccCChhhhhhhh
Confidence 344544455566678889888888777777777889998877666665554433
No 86
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.40 E-value=2.2e+02 Score=19.94 Aligned_cols=43 Identities=16% Similarity=-0.001 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeee
Q 023855 40 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHH 82 (276)
Q Consensus 40 ~~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~ 82 (276)
.+.+...+...+..+.+.+++.+............+.||....
T Consensus 87 ~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~ 129 (157)
T 1mk4_A 87 KQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFDIEK 129 (157)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCEEcC
Confidence 3445555555566678889999888887888888889998766
No 87
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=20.68 E-value=2.2e+02 Score=19.83 Aligned_cols=44 Identities=9% Similarity=0.067 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeee
Q 023855 40 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHA 83 (276)
Q Consensus 40 ~~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~ 83 (276)
++.+...+..-+..+.+.+++.+............+.||.....
T Consensus 94 ~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~~~~~ 137 (162)
T 2fia_A 94 SLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHE 137 (162)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCEEEee
Confidence 34455555555666788899998888777777788899976544
No 88
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=20.59 E-value=2.3e+02 Score=19.93 Aligned_cols=56 Identities=13% Similarity=0.060 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHcCccEEEEEcccccccchHHHHhcCceeeeecCc------eEEEEeecC
Q 023855 40 ASLLKSSISHWRQQAKKGVWIKLPIELANLVEPAVKEGFWFHHAEPN------YLMLVYWIP 95 (276)
Q Consensus 40 ~~~l~~~l~~w~~~~~~~iw~~~~~~~~~l~~~~~~~gf~~h~~~~~------~~~l~~~~~ 95 (276)
++.|...+...+..+.+.|++.+............+.||........ .+.|.+.++
T Consensus 93 ~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~~~~~~~~~~~~~~~~~m~k~l~ 154 (162)
T 3lod_A 93 EKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRCAFAPYQPDPLSVFMEKPLF 154 (162)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCEEECCCTTCCCCSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCEEcccccccCCCCccEEEEEecC
Confidence 44455555566667788899999888877888888899987665433 345555443
Done!