BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023858
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4F1|PAP10_ARATH Probable plastid-lipid-associated protein 10, chloroplastic
OS=Arabidopsis thaliana GN=PAP10 PE=1 SV=1
Length = 284
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/268 (71%), Positives = 224/268 (83%), Gaps = 10/268 (3%)
Query: 15 RVKPL---TSSNATRKLYSQMKVSG---SATVAVDRTQVSEFELENKKHDLLSTIQGTQR 68
R+ P +N ++ ++ V+ SA V VD +E +LE+KKHDLL +Q TQR
Sbjct: 21 RISPFGLNIKTNHRKRFSCRVAVASGETSARVVVD----NELDLEHKKHDLLRAVQDTQR 76
Query: 69 GQNTNADQRSIIEEALVGLEGCNMGEPIDLVKLDGTWRLQYTSAPDVLVLFEAAARLPFF 128
G +DQRSIIEEALV +EG N GE ID VKLDGTWRLQYTSAPDV+VLFEAA+RLPFF
Sbjct: 77 GLTATSDQRSIIEEALVTVEGFNGGEEIDPVKLDGTWRLQYTSAPDVVVLFEAASRLPFF 136
Query: 129 KVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEE 188
+VGQ+FQKFECRD+SDGG+I NVV+WS+P LLE++EGATLVV+AKFD VS RNIYLQFEE
Sbjct: 137 QVGQVFQKFECRDRSDGGIIRNVVQWSLPSLLEEQEGATLVVTAKFDKVSSRNIYLQFEE 196
Query: 189 VTVQNIYISEELQALIAPAILPRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLS 248
++V+NI I+E+LQALIAPAILPRSFLSLQ+LQFIR FKAQIPV T+PGRRSVGGLYYLS
Sbjct: 197 ISVRNININEQLQALIAPAILPRSFLSLQLLQFIRTFKAQIPVNATSPGRRSVGGLYYLS 256
Query: 249 YLDNNMLLGRAVGGGGVFVFTKAQPLEL 276
YLDNNMLLGR+VGGGGVFVFTK+QPLEL
Sbjct: 257 YLDNNMLLGRSVGGGGVFVFTKSQPLEL 284
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 35/253 (13%)
Query: 36 GSATVAVDRTQVSEFELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGE 94
GSA + + S E E K L+ ++ GT RG + +++ R+ I + + LE N
Sbjct: 76 GSALLMAEEAIESVEETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPA 135
Query: 95 PID-LVKLDGTWRLQYTSAPDVLVLFEAAAR--LPFFKVGQIFQKFECRDKSDGGVICNV 151
P D L L+G W L YTS + LF +R +P KV +I Q + SD + N
Sbjct: 136 PTDALFLLNGKWILAYTS---FVGLFPLLSRGIVPLVKVDEISQTID----SDNFTVENS 188
Query: 152 VRWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-- 203
V ++ P ++ +AKF++ S + + ++FEE + +I I E ++ L
Sbjct: 189 VLFAGP-----LATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQ 243
Query: 204 ---IAPAILPRSFL-SLQ--ILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLG 257
+ P R L S+Q R +Q P+ + PG S +YLD ++ +
Sbjct: 244 KIDLTPI---RGLLTSVQDTATSVARTISSQPPLKFSLPGD-SAQSWLLTTYLDKDIRIS 299
Query: 258 RAVGGGGVFVFTK 270
R GG VFV K
Sbjct: 300 RG-DGGSVFVLIK 311
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 30/252 (11%)
Query: 35 SGSATVAV-DRTQVSEFELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCNMG 93
+ S+TV+V D+ S E E K L ++ GT RG + ++D R+ I E + LE N
Sbjct: 73 ASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPT 132
Query: 94 EPID--LVKLDGTWRLQYTSAPDVLVLFEAAARL--PFFKVGQIFQKFECRDKSDGGVIC 149
+ L L+G W L YTS + LF +R P KV +I Q + SD +
Sbjct: 133 PAPNEALFLLNGKWILAYTS---FVGLFPLLSRRIEPLVKVDEISQTID----SDSFTVQ 185
Query: 150 NVVRWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL 203
N VR++ P + +AKF++ S + + ++FE+ + +I I E ++ L
Sbjct: 186 NSVRFAGP-----FSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVL 240
Query: 204 -----IAPAILPRSFLSLQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGR 258
+ P + + R Q P+ + P + L +YLD ++ + R
Sbjct: 241 GQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLT-TYLDKDLRISR 299
Query: 259 AVGGGGVFVFTK 270
GG V+V K
Sbjct: 300 G-DGGSVYVLIK 310
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 35/253 (13%)
Query: 36 GSATVAVDRTQVSEFELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGE 94
GSA +A + E E K L+ ++ GT RG + +++ R+ I + + LE N
Sbjct: 67 GSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPA 126
Query: 95 PID-LVKLDGTWRLQYTSAPDVLVLFEAAAR--LPFFKVGQIFQKFECRDKSDGGVICNV 151
P + L L+G W L YTS + LF +R +P KV +I Q + SD + N
Sbjct: 127 PTEALFLLNGKWILAYTS---FVNLFPLLSRGIVPLIKVDEISQTID----SDNFTVQNS 179
Query: 152 VRWSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-- 203
VR++ P ++ +AKF++ S + + ++FE+ + +I I E ++ L
Sbjct: 180 VRFAGP-----LGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQ 234
Query: 204 ---IAPAILPRSFL-SLQ--ILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLG 257
+ P R L S+Q R +Q P+ + P + L +YLD ++ +
Sbjct: 235 KIDLNPI---RGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLT-TYLDKDIRIS 290
Query: 258 RAVGGGGVFVFTK 270
R GG VFV K
Sbjct: 291 RG-DGGSVFVLIK 302
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 35/247 (14%)
Query: 38 ATVAVDRTQVSEFELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCNMGE-PI 96
A VD+T +EL K L T+ GT+ G ++ R+ + E + LE N + P+
Sbjct: 127 ADDGVDKT----WEL---KRCLADTVYGTELGFRAGSEVRAEVLEIVNQLEALNPTQAPV 179
Query: 97 DLVKL-DGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWS 155
+ +L DG W L YT+ ++L L AA P KV I Q + + S I N S
Sbjct: 180 ENPELLDGNWVLLYTAFSELLPLL-AAGSTPLLKVKSISQSIDTKSLS----IDNSTTLS 234
Query: 156 VPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPR---- 211
P + +A F+V + I + F+E T++ I + + + +
Sbjct: 235 SP-----FADFSFSATASFEVRTPSRIEVSFKEGTLKPPEIKSSVDLPESVGVFGQEINL 289
Query: 212 SFL--SLQILQFI-----RAFKAQIPVTNTTPGRRSVGGLYYL-SYLDNNMLLGRAVGGG 263
SFL SL LQ + RA Q P+ PG R G + L +YLD ++ + R G G
Sbjct: 290 SFLKQSLNPLQDVAANISRAISGQPPLKLPFPGNR--GSSWLLTTYLDKDLRISR--GDG 345
Query: 264 GVFVFTK 270
G+FV +
Sbjct: 346 GLFVLAR 352
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 115/254 (45%), Gaps = 37/254 (14%)
Query: 36 GSATVAVDRTQVSEFELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGE 94
G+ VA + + E++N K L+ + GT RG N ++ R+ I E + LE N
Sbjct: 80 GALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPA 139
Query: 95 PID-LVKLDGTWRLQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVR 153
P + L L+ W L YTS + L + LP +V +I Q + S+ + N ++
Sbjct: 140 PTEALTLLNAKWILVYTSFSGLFPLL-SRGTLPLARVEEISQTID----SENFTVQNSIQ 194
Query: 154 WSVPPLLEKEEGATLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRS- 212
++ P ++ +AKF+V S + + ++FEE + +++ L +LP +
Sbjct: 195 FAGP-----LATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSL-------VLPENV 242
Query: 213 -FLSLQ--------ILQFIRAFKAQIP--VTNTTPGRRSVGG-----LYYLSYLDNNMLL 256
FL + IL ++ + + +++ P + S+ +YLD ++ +
Sbjct: 243 EFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRI 302
Query: 257 GRAVGGGGVFVFTK 270
RA G VFVF K
Sbjct: 303 SRA-DAGSVFVFIK 315
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 32/235 (13%)
Query: 52 LENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-----MGEPIDLVKLDGTWR 106
LE K L+ T+ GT+ G ++ R+ + E + LE N + EP DL L+G W
Sbjct: 132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEP-DL--LNGNWV 188
Query: 107 LQYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGA 166
L YT++ ++L L AA LP K+ +I Q + +D + N L
Sbjct: 189 LLYTASSELLPLL-AAGSLPLLKLDKISQTID----TDSFTVVNSTT-----LSSPFASF 238
Query: 167 TLVVSAKFDVVSVRNIYLQFEEVTVQNIYISEEL-----------QALIAPAILPRSFLS 215
+ VSA F+V S I + F+E ++Q I ++ Q + P + L
Sbjct: 239 SFSVSASFEVRSPTRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSLGPLLQSLGPLE 298
Query: 216 LQILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTK 270
+ R Q P+ PG R+ L +YLD ++ + R G GG+FV +
Sbjct: 299 NVVANISRVISGQSPLKIPIPGERTSSWLIT-TYLDKDLRISR--GDGGLFVLAR 350
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCNMGEPID--LVKLDGTWRLQYTSAP 113
K L ++ GT RG + +++ R+ I E + LE N + L L+G W L YTS
Sbjct: 104 KRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTS-- 161
Query: 114 DVLVLFEAAARL--PFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVS 171
+ LF +R P KV +I Q + SD + N VR++ P +L +
Sbjct: 162 -FVGLFPLLSRRISPLVKVDEISQTID----SDSFTVHNSVRFASP-----LATTSLSTN 211
Query: 172 AKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-----IAPAILPRSFLSLQILQ 220
AKF+V S + + ++FE+ + +I I E ++ L + P + +
Sbjct: 212 AKFEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASS 271
Query: 221 FIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTK 270
R +Q P+ + PG S +YLD ++ + R GG VFV +
Sbjct: 272 VARTISSQPPLKFSLPG-DSAQSWLLTTYLDKDLRISRG-DGGSVFVLIR 319
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGEPIDLVKL-DGTWRLQYTSAP 113
K L ++ GT+ G ++ R+ + E + LE N P++ +L DG W L YT+
Sbjct: 154 KRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFS 213
Query: 114 DVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVSAK 173
+++ L AA P KV I Q + + +I N S P + +A
Sbjct: 214 ELIPLL-AAGSTPLLKVKSISQSIDTNNL----IIDNSTTLSSP-----FADFSFSATAS 263
Query: 174 FDVVSVRNIYLQFEEVTVQNIYISEELQ---------ALIAPAILPRSFLSLQIL--QFI 222
F+V S I + F+E T++ I + I+ ++L +S LQ +
Sbjct: 264 FEVRSPSRIEVSFKEGTLKPPVIKSSVDLPESVGVFGQQISLSLLKQSLNPLQDVAANIS 323
Query: 223 RAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTK 270
RA Q P+ PG R L +YLD ++ + R G GG+FV +
Sbjct: 324 RALSGQPPLKLPFPGNRGSSWLLT-TYLDKDLRISR--GDGGLFVLAR 368
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 26/233 (11%)
Query: 51 ELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGEPID-LVKLDGTWRLQ 108
E+ K L+ + GT RG + D R+ I E + LE N P + L L+G W L
Sbjct: 95 EIYKLKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILA 154
Query: 109 YTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATL 168
YT+ + L + LP KV +I Q + S+ + N V++S P ++
Sbjct: 155 YTTFAGLFPLL--SRNLPLVKVEEISQTID----SENLTVQNSVQFSGP-----LATTSI 203
Query: 169 VVSAKFDVVSVRNIYLQFEEVTV------QNIYISEELQAL-----IAPAILPRSFLSLQ 217
+AKF+V S ++++FEE + +I I + + L P S L
Sbjct: 204 TTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDT 263
Query: 218 ILQFIRAFKAQIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTK 270
+ +Q P+ + R V +YLD ++ + R GG VFV K
Sbjct: 264 ASNVAKTISSQPPIKFSISNTR-VESWLLTTYLDEDLRISRG-DGGSVFVLLK 314
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGEPIDLVKL-DGTWRLQYTSAP 113
K L+ T+ G+ G +++ R + E + LE N EP+ L G W L YT+
Sbjct: 150 KRCLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYS 209
Query: 114 DVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVSAK 173
++L + A P FKV +I Q+ + + I N + + +A
Sbjct: 210 ELLPILAVGA-APLFKVDEISQEIDTNSMT----IVNAST-----ISSPFASFSFSATAS 259
Query: 174 FDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRSFLSLQILQFI-----RAFKA- 227
FDV S I +QF+E + Q IS + L A + +SL +Q + +AF +
Sbjct: 260 FDVQSPSRIEVQFKEGSFQPPKISSSVD-LPAEVDIFGQKISLGPVQQVLNPLQQAFASI 318
Query: 228 ------QIPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTK 270
Q P+ PG +YLD ++ + R G GG+F+ K
Sbjct: 319 AGSISGQPPLKLPIPGNNRARSWLLTTYLDKDLRISR--GDGGLFILVK 365
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 65 GTQRGQNTNADQRSIIEEALVGLEGCNMGEPIDLV----KLDGTWRLQYTSAPDVLVLFE 120
G RG + D E A LE G P+DL KL G WRL Y+SA L
Sbjct: 97 GLNRGLVASVDDLERAEVAAKELE--TAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGG 154
Query: 121 AAARLPFFK-----VGQIFQKFECRDKSDGGVICNV---VRWSVPPLLEKEEGATLVVSA 172
+ LP + +GQ+FQ+ + K D I V W PPL AT ++
Sbjct: 155 SRPGLPTGRLIPVTLGQVFQRIDVFSK-DFDNIAEVELGAPWPFPPL-----EATATLAH 208
Query: 173 KFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRSFLSLQILQFIRAFKAQIPVT 232
KF+++ I + FE+ TV+ ++ P LP SF P +
Sbjct: 209 KFELLGTCKIKITFEKTTVKTSGNLSQIPPFDIPR-LPDSFR---------------PSS 252
Query: 233 NTTPGRRSVGGLYYLSYLDNNMLLGRAVGG 262
N PG G + ++Y+D+ M + R G
Sbjct: 253 N--PGT----GDFEVTYVDDTMRITRGDRG 276
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 44/243 (18%)
Query: 51 ELENKKHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGEPID-LVKLDGTWRLQ 108
E+ K L + GT+RG +++ R+ + E + LE N P + L L+G W L
Sbjct: 91 EVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILA 150
Query: 109 YTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATL 168
YTS + L + + KV +I Q + S+ + N +++S P AT
Sbjct: 151 YTSFSQLFPLLGSGSLPQLVKVEEISQTID----SENFTVQNCIKFSGP-------LATT 199
Query: 169 VVS--AKFDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRSF------LSLQILQ 220
VS AKF+V S + + ++F+E + +++ + +LP F + L L+
Sbjct: 200 SVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSI-------VLPEKFELFGQNIDLTPLK 252
Query: 221 FI------------RAFKAQIPVTNTTPGRRSVGGLYYL-SYLDNNMLLGRAVGGGGVFV 267
I R Q P+ P R + L +YLD+ + + R G +FV
Sbjct: 253 GIFSSIENAASSVARTISGQPPL--KIPIRTDNAESWLLTTYLDDELRISRG-DGSSIFV 309
Query: 268 FTK 270
K
Sbjct: 310 LFK 312
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 47/239 (19%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCNMGE-PID-LVKLDGTWRLQYTSAP 113
K L ++ GT RG + +++ R+ I E + LE N P + L L+G W L YTS
Sbjct: 103 KKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFS 162
Query: 114 DVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVSAK 173
+ L + LP +V +I Q + S+ + N V ++ P ++ +AK
Sbjct: 163 GLFPLL-SRGNLPLVRVEEISQTID----SESFTVQNSVVFAGP-----LATTSISTNAK 212
Query: 174 FDVVSVRNIYLQFEEVTVQNIYISEELQALIAPAILPRS--FLSLQI------------- 218
F+V S + + ++FEE + +++ + +LP + FL +I
Sbjct: 213 FEVRSPKRVQIKFEEGIIGTPQLTDSI-------VLPENVEFLGQKIDVSPFKGLITSVQ 265
Query: 219 ---LQFIRAFKAQ----IPVTNTTPGRRSVGGLYYLSYLDNNMLLGRAVGGGGVFVFTK 270
+++ +Q P+TN + +YLD+ + + R G VFV K
Sbjct: 266 DTASSVVKSISSQPPIKFPITN-----NNAQSWLLTTYLDDELRIPRG-DAGSVFVLIK 318
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 12/135 (8%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCNMGE-PID-LVKLDGTWRLQYTSAP 113
K L ++ GT RG + +++ R+ I E + LE N P + L L+G W L YTS
Sbjct: 103 KKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFS 162
Query: 114 DVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGATLVVSAK 173
+ L + LP +V +I Q + S+ + N V ++ P ++ +AK
Sbjct: 163 GLFPLL-SRGNLPLVRVEEISQTID----SESFTVQNSVVFAGP-----LATTSISTNAK 212
Query: 174 FDVVSVRNIYLQFEE 188
F+V S + + ++FEE
Sbjct: 213 FEVRSPKRVQIKFEE 227
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 9 FHLATGRVKPLTSSNATRKLYSQMKVSGSATVAVDRTQVSEF-ELENKKHDLLSTIQGTQ 67
F+L + L S R L ++ S S+TV D+TQ S F + E K D L IQG
Sbjct: 33 FNLLNTTSRRLGLSRNCRTL--RISCSSSSTV-TDQTQQSSFNDAELKLIDALIGIQG-- 87
Query: 68 RGQNTNADQRSIIEEALVGLEGCN-MGEPIDLVKLDGTWRLQYTSAP 113
RG++ + Q + +E A+ LEG + P D ++G WRL +T+ P
Sbjct: 88 RGKSASPKQLNDVESAVKVLEGLEGIQNPTDSDLIEGRWRLMFTTRP 134
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGEPIDLVKLDGTWRLQYTSAPD 114
KH+L+ I+ +RG + D + +I++ +E N EP+ ++G W L YT++
Sbjct: 66 KHELVEAIEPLERGATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSAA 125
Query: 115 VL 116
+L
Sbjct: 126 IL 127
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 108 QYTSAPDVLVLFEAAARLPFFKVGQIFQKFECRDKSDGGVICNVVRWSVPPLLEKEEGAT 167
+Y A +++ E A P ++ ++ R + GG++ N + VPP + E
Sbjct: 1509 RYCKAHNLMWHQEFATEHPVQELERLLSAVLIRHQYLGGLVLNALETEVPPPRQLGEIIR 1568
Query: 168 LVVSAKFDVVSVR-NIYLQFEEVTVQNIYISEELQAL---IAPAILP--RSFLSLQILQF 221
LV AK+ VV R + ++EV I E L+ L + PAI P R L ILQ
Sbjct: 1569 LVHQAKWSVVRTRQQLNRSYKEVCAP---ILERLRFLLYEVRPAISPQQRGLRRLPILQR 1625
Query: 222 IRAFK 226
FK
Sbjct: 1626 PPRFK 1630
>sp|Q8KEP3|DNAK_CHLTE Chaperone protein DnaK OS=Chlorobium tepidum (strain ATCC 49652 /
DSM 12025 / TLS) GN=dnaK PE=3 SV=1
Length = 633
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 7 SSFHLATGR---VKPLTSSNATRKLYSQMKVSGSATVAVDRTQVSEFELENKKHDLL--S 61
S+ ATG+ +K S T +MK A A D+ + E EL+N L+ +
Sbjct: 480 SAKDKATGKEQSIKIEASGKLTEAEIEKMKEDAKAHAAEDQKRKEEIELKNSADSLIFST 539
Query: 62 TIQGTQRGQNTNADQRSIIEEALVGLEGCNMGEPIDLVK 100
Q T+ G AD+++ IE AL L+ + +D +K
Sbjct: 540 EKQLTELGDKLPADKKAAIESALEKLKEAHKSGRVDAIK 578
>sp|Q9CDH8|MNME_LACLA tRNA modification GTPase MnmE OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=mnmE PE=3 SV=1
Length = 455
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 10/56 (17%)
Query: 72 TNADQRSIIEEALVGLEGCN----MGEPIDLVKLDGT--WRL--QYT--SAPDVLV 117
+NA SI+EEAL L+ N +G P+DL+++D T W+L + T +APD L+
Sbjct: 389 SNARHISIVEEALKALKEANSGLALGLPVDLIQVDVTRCWQLLGEITGEAAPDELI 444
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 56 KHDLLSTIQGTQRGQNTNADQRSIIEEALVGLEGCN-MGEPIDLVKLDGTWRLQYTSAPD 114
K +LL I+ +RG + D + I++ +E N EP+ ++G W L YT++
Sbjct: 75 KQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKSDLVNGKWELIYTTSAS 134
Query: 115 VL 116
+L
Sbjct: 135 IL 136
>sp|A2RP37|MNME_LACLM tRNA modification GTPase MnmE OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=mnmE PE=3 SV=1
Length = 455
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 10/56 (17%)
Query: 72 TNADQRSIIEEALVGLEGCN----MGEPIDLVKLDGT--WRL--QYT--SAPDVLV 117
+NA S++EEAL L+ N +G P+DL+++D T W+L + T +APD L+
Sbjct: 389 SNARHISLVEEALKALKEANNGLALGLPVDLIQVDVTRCWQLLGEITGEAAPDELI 444
>sp|Q02VP7|MNME_LACLS tRNA modification GTPase MnmE OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=mnmE PE=3 SV=1
Length = 455
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 10/56 (17%)
Query: 72 TNADQRSIIEEALVGLEGCN----MGEPIDLVKLDGT--WRL--QYT--SAPDVLV 117
+NA S++EEAL L+ N +G P+DL+++D T W+L + T +APD L+
Sbjct: 389 SNARHISLVEEALKALKEANNGLALGLPVDLIQVDVTRCWQLLGEITGEAAPDELI 444
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,510,791
Number of Sequences: 539616
Number of extensions: 3677495
Number of successful extensions: 8328
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 8314
Number of HSP's gapped (non-prelim): 30
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)