Your job contains 1 sequence.
>023863
MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRR
RMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQ
SLEGWISECLNDPEMNFSTDELLRDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTP
HNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTED
PSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023863
(276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2156519 - symbol:XRI1 "AT5G48720" species:3702... 677 1.3e-66 1
TAIR|locus:2041110 - symbol:AT2G01990 "AT2G01990" species... 172 5.5e-13 1
TAIR|locus:2204538 - symbol:AT1G14630 "AT1G14630" species... 146 1.6e-08 1
>TAIR|locus:2156519 [details] [associations]
symbol:XRI1 "AT5G48720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006281 "DNA repair" evidence=IMP] [GO:0007140
"male meiosis" evidence=IMP] [GO:0007143 "female meiosis"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
[GO:0010165 "response to X-ray" evidence=IEP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0009165
"nucleotide biosynthetic process" evidence=RCA] [GO:0010332
"response to gamma radiation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009555
GO:GO:0006281 GO:GO:0007143 GO:GO:0007140 GO:GO:0010165
EMBL:AB012242 EMBL:BT012214 EMBL:BT020567 IPI:IPI00546555
IPI:IPI00931065 RefSeq:NP_001154770.1 RefSeq:NP_199683.2
UniGene:At.50516 IntAct:Q6NLW5 STRING:Q6NLW5
EnsemblPlants:AT5G48720.2 GeneID:834930 KEGG:ath:AT5G48720
TAIR:At5g48720 eggNOG:NOG242961 HOGENOM:HOG000070695
InParanoid:Q6NLW5 OMA:ITIMRTR PhylomeDB:Q6NLW5
ProtClustDB:CLSN2681668 Genevestigator:Q6NLW5 Uniprot:Q6NLW5
Length = 300
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 144/270 (53%), Positives = 186/270 (68%)
Query: 8 EVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDT 67
EV LN ED SYM DDE TPVKAC +L YH T + +++ + ET S +KRRRMLQF+
Sbjct: 37 EVTLNQEDHSYMFDDENTPVKACSELGYHVTTE-DTNRKMEVHSETRSALKRRRMLQFED 95
Query: 68 QVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFS-GVSASSCDGTDQSLEGWI 126
Q ++SL S E S LKS+ R ++ +E+LPE SQ FS SASS +G D E W
Sbjct: 96 QP-ETSLFSSESFSAILKSSARDDTFDELLPEGSQLIEGFSEDASASSFEGLDLYAEEWY 154
Query: 127 SECLNDPEMNFSTDELLRDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFR 186
++CLND E D+L +F G+ D+Q+DISE+ N PP + + Q+ T++ NV+F+
Sbjct: 155 ADCLNDAETPMLPDDL--NF-GSPDVQVDISEYLNVPPETETREV-QRPVTRSSPNVIFK 210
Query: 187 GRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPK 246
GRKS R +KL SS+ YPFAFIKPCGVHG +TLKDINQ+I +P + + + E+P+
Sbjct: 211 GRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAHIEEPAVIQT 270
Query: 247 SAFSGKPVVGKTKIRTEGGKGSITIMRTKG 276
SAFSGKPVVGKTKIRTEGGKGSITIMRT+G
Sbjct: 271 SAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300
>TAIR|locus:2041110 [details] [associations]
symbol:AT2G01990 "AT2G01990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 EMBL:BT020397 IPI:IPI00548565
RefSeq:NP_178308.2 UniGene:At.41526 DNASU:814730
EnsemblPlants:AT2G01990.1 GeneID:814730 KEGG:ath:AT2G01990
OMA:NERILMA ProtClustDB:CLSN2918894 Genevestigator:Q5M751
Uniprot:Q5M751
Length = 213
Score = 172 (65.6 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 64/175 (36%), Positives = 86/175 (49%)
Query: 119 DQSLEGW-ISE---CLND----PEMNFSTDELLRDFSGASDIQIDISEFSNSPP---AYD 167
D S W + E CLN P +N T E + SG S Q IS SP +YD
Sbjct: 52 DDSQNDWGLHESYSCLNSQFVTPHVN--TGERI---SGVSYCQETISNVYESPDTSVSYD 106
Query: 168 DANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRI 227
+ ++ T+ + K LI TKL YPF +KP G D+TL DIN+RI
Sbjct: 107 KIYVREKSPTEPSSSNCGNKNKRLI---TKLV----YPFGLVKPGGRENDVTLNDINERI 159
Query: 228 -HSPASTLRQNTEDPSAYP-----KSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 276
+P+ +R D ++ P SGK VV TKI+T+G +G+ITI+RTKG
Sbjct: 160 LMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALTKIQTQG-RGTITIIRTKG 213
>TAIR|locus:2204538 [details] [associations]
symbol:AT1G14630 "AT1G14630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC010657
IPI:IPI00546600 RefSeq:NP_172915.4 UniGene:At.49883 DNASU:838025
EnsemblPlants:AT1G14630.1 GeneID:838025 KEGG:ath:AT1G14630
TAIR:At1g14630 eggNOG:NOG295899 HOGENOM:HOG000242854
InParanoid:Q3EDC6 OMA:SENYSCT PhylomeDB:Q3EDC6
ProtClustDB:CLSN2927333 Genevestigator:Q3EDC6 Uniprot:Q3EDC6
Length = 226
Score = 146 (56.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/81 (50%), Positives = 49/81 (60%)
Query: 202 VAYPFAFIKPCGVHGDITLKDINQRIHSP-ASTLRQNTEDPSAYP-KSA----FSGKPVV 255
V YPF +KP G DITL DIN+RI P A +R D + P SA SGK VV
Sbjct: 147 VVYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVV 206
Query: 256 GKTKIRTEGGKGSITIMRTKG 276
TKI+T G +G+ITI+RTKG
Sbjct: 207 AFTKIQTLG-RGTITIIRTKG 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 276 276 0.00079 115 3 11 23 0.42 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 610 (65 KB)
Total size of DFA: 218 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.16u 0.13s 25.29t Elapsed: 00:00:01
Total cpu time: 25.16u 0.13s 25.29t Elapsed: 00:00:01
Start: Sat May 11 00:38:11 2013 End: Sat May 11 00:38:12 2013