Query 023863
Match_columns 276
No_of_seqs 62 out of 64
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 14:04:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023863.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/023863hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d5va_ a.4.5.14 (A:) Adipocyt 20.6 22 0.0016 25.7 2.0 18 213-230 20-37 (94)
2 d2cyua1 a.9.1.1 (A:2-40) E3-bi 12.0 44 0.0032 20.6 1.5 22 205-226 15-36 (39)
3 d2nqwa1 d.145.1.4 (A:4-90) Hyp 11.5 45 0.0033 22.7 1.6 26 205-230 2-29 (87)
4 d1w85i_ a.9.1.1 (I:) E3/E1 bin 10.0 59 0.0043 20.3 1.6 21 207-227 20-40 (42)
5 d2o3ga1 d.145.1.4 (A:180-255) 8.9 43 0.0032 22.4 0.6 17 214-230 5-21 (76)
6 d2rk5a1 d.145.1.4 (A:5-88) Put 8.7 55 0.004 22.0 1.1 17 214-230 10-26 (84)
7 d2p13a1 d.145.1.4 (A:431-515) 8.5 56 0.0041 22.1 1.1 17 214-230 15-31 (85)
8 d2c6ya1 a.4.5.14 (A:1-98) Inte 7.7 76 0.0055 22.8 1.6 19 212-230 18-36 (98)
9 d1uqra_ c.23.13.1 (A:) Type II 7.4 70 0.0051 24.7 1.3 17 214-230 22-38 (146)
10 d2o1ra1 d.145.1.4 (A:1-78) Hyp 7.4 68 0.0049 21.4 1.1 17 214-230 10-26 (78)
No 1
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=22 Score=25.71 Aligned_cols=18 Identities=33% Similarity=0.266 Sum_probs=14.9
Q ss_pred CccCCcchHhHHhhhcCC
Q 023863 213 GVHGDITLKDINQRIHSP 230 (276)
Q Consensus 213 g~~gd~TL~DIN~ri~~~ 230 (276)
.-+|.+||+||.+.|...
T Consensus 20 sp~~~ltL~eIY~~i~~~ 37 (94)
T d1d5va_ 20 APEKKITLNGIYQFIMDR 37 (94)
T ss_dssp CSSSSBCHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHH
Confidence 457889999999999754
No 2
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=11.95 E-value=44 Score=20.60 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=18.0
Q ss_pred eeeeeccCCccCCcchHhHHhh
Q 023863 205 PFAFIKPCGVHGDITLKDINQR 226 (276)
Q Consensus 205 PF~~vKP~g~~gd~TL~DIN~r 226 (276)
-.+.|++.|.+|-||-.||=+-
T Consensus 15 dl~~i~GtG~~GRI~k~Dv~~~ 36 (39)
T d2cyua1 15 DASAIKGTGVGGRLTREDVEKH 36 (39)
T ss_dssp CGGGSCCCSSSSCCCHHHHHHH
T ss_pred CHHHCcCCCCCCcEeHHHHHHH
Confidence 3457899999999999998543
No 3
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=11.50 E-value=45 Score=22.68 Aligned_cols=26 Identities=23% Similarity=0.484 Sum_probs=19.8
Q ss_pred eeeeeccC--CccCCcchHhHHhhhcCC
Q 023863 205 PFAFIKPC--GVHGDITLKDINQRIHSP 230 (276)
Q Consensus 205 PF~~vKP~--g~~gd~TL~DIN~ri~~~ 230 (276)
||..+-.+ -++|.++|.|+|+.+-..
T Consensus 2 p~~ki~d~~~~v~G~~~l~dl~~~l~~~ 29 (87)
T d2nqwa1 2 PFKVLGDGSYLFEGKTSLSDVRHYLDLP 29 (87)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCC
T ss_pred CeEEECCCEEEEEEeCCHHHHHHHhCCC
Confidence 55555555 468999999999998654
No 4
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=9.98 E-value=59 Score=20.34 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=17.6
Q ss_pred eeeccCCccCCcchHhHHhhh
Q 023863 207 AFIKPCGVHGDITLKDINQRI 227 (276)
Q Consensus 207 ~~vKP~g~~gd~TL~DIN~ri 227 (276)
+.|++.|.+|-||-.||-+-|
T Consensus 20 ~~i~GTG~~GRItk~DV~~~i 40 (42)
T d1w85i_ 20 RLVQGTGKNGRVLKEDIDAFL 40 (42)
T ss_dssp TTSCCCSGGGCCCHHHHHHHH
T ss_pred HHCccCCCCCcEeHHHHHHHh
Confidence 468999999999999996544
No 5
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=8.88 E-value=43 Score=22.39 Aligned_cols=17 Identities=18% Similarity=0.532 Sum_probs=15.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 023863 214 VHGDITLKDINQRIHSP 230 (276)
Q Consensus 214 ~~gd~TL~DIN~ri~~~ 230 (276)
++|.++|.|+|+.+-.+
T Consensus 5 vdG~~~i~dl~~~l~~~ 21 (76)
T d2o3ga1 5 VEGALEYVELAPQLNLP 21 (76)
T ss_dssp EETTCBHHHHTTTTTCC
T ss_pred EEcCCCHHHHHHHHCcC
Confidence 68999999999998765
No 6
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=8.70 E-value=55 Score=21.96 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=15.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 023863 214 VHGDITLKDINQRIHSP 230 (276)
Q Consensus 214 ~~gd~TL~DIN~ri~~~ 230 (276)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (84)
T d2rk5a1 10 VLGTMTLNDFNEYFETD 26 (84)
T ss_dssp EETTSBHHHHHHHHTCC
T ss_pred EEeeeEHHHHHHHhCCC
Confidence 67999999999999765
No 7
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=8.47 E-value=56 Score=22.11 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=14.8
Q ss_pred ccCCcchHhHHhhhcCC
Q 023863 214 VHGDITLKDINQRIHSP 230 (276)
Q Consensus 214 ~~gd~TL~DIN~ri~~~ 230 (276)
++|.++|.|+|+.+-..
T Consensus 15 v~G~~~l~dl~~~l~~~ 31 (85)
T d2p13a1 15 MDGWISIRKASNLLEHD 31 (85)
T ss_dssp EETTSBHHHHHHHHTSC
T ss_pred EEecCCHHHHHHHHCCC
Confidence 68999999999998654
No 8
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.70 E-value=76 Score=22.79 Aligned_cols=19 Identities=21% Similarity=0.253 Sum_probs=15.4
Q ss_pred CCccCCcchHhHHhhhcCC
Q 023863 212 CGVHGDITLKDINQRIHSP 230 (276)
Q Consensus 212 ~g~~gd~TL~DIN~ri~~~ 230 (276)
...+|.+||+||.+.|...
T Consensus 18 ~sp~~~ltL~eIy~~i~~~ 36 (98)
T d2c6ya1 18 MAPDKQLTLNGIYTHITKN 36 (98)
T ss_dssp TSTTSCEEHHHHHHHHHHH
T ss_pred hCCCCCccHHHHHHHHHHh
Confidence 3467889999999999654
No 9
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=7.44 E-value=70 Score=24.69 Aligned_cols=17 Identities=35% Similarity=0.593 Sum_probs=14.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 023863 214 VHGDITLKDINQRIHSP 230 (276)
Q Consensus 214 ~~gd~TL~DIN~ri~~~ 230 (276)
.-|.+||.|||+++..-
T Consensus 22 iYG~~TL~~i~~~~~~~ 38 (146)
T d1uqra_ 22 IYGSQTLSDIEQHLQQS 38 (146)
T ss_dssp GTTCCCHHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHHHH
Confidence 56889999999998643
No 10
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=7.40 E-value=68 Score=21.38 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=14.9
Q ss_pred ccCCcchHhHHhhhcCC
Q 023863 214 VHGDITLKDINQRIHSP 230 (276)
Q Consensus 214 ~~gd~TL~DIN~ri~~~ 230 (276)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (78)
T d2o1ra1 10 IDGSANLRDLNKMFNWE 26 (78)
T ss_dssp EETTCBHHHHHHHHCCC
T ss_pred EEeeCCHHHHHHHHCCC
Confidence 57999999999998765
Done!