BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023864
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WV9|QPCT_ARATH Glutaminyl-peptide cyclotransferase OS=Arabidopsis thaliana GN=QCT
PE=1 SV=1
Length = 320
Score = 265 bits (678), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/264 (56%), Positives = 174/264 (65%), Gaps = 27/264 (10%)
Query: 1 MGSRSLKKKPSKRSISQSDRPAPSPSPSPSSSSSSSSSCMASNHFSRFRHYNKGIPAVML 60
M +RS K+ +KRS+ QS PA S + S S M IP +L
Sbjct: 1 MATRSPYKRQTKRSMIQS-LPASSSASSRRRFISRKRFAMM-------------IPLALL 46
Query: 61 ---IFFFLCGFVLLCISSNMWIRFPG--VDQSPSIYTIQVVNEFPHDPRAFTQGLLYAEN 115
+F F F N W + G +D S I I+VV EFPHDP AFTQGLLYA N
Sbjct: 47 SGAVFLFFMPF-------NSWGQSSGSSLDLSHRINEIEVVAEFPHDPDAFTQGLLYAGN 99
Query: 116 DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIY 175
DTLFESTGLYG+SSVR+V L TGKVE + +M+ +YFGEGLTLLGE+LFQV WL TGF Y
Sbjct: 100 DTLFESTGLYGKSSVRKVDLRTGKVEILEKMDNTYFGEGLTLLGERLFQVAWLTNTGFTY 159
Query: 176 DQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREV 235
D NL+K++ F H MKDGWGLATDGK LFGSDG+S LY++DPQT+KV K IVRY GREV
Sbjct: 160 DLRNLSKVKPFKHHMKDGWGLATDGKALFGSDGTSTLYRMDPQTMKVTDKHIVRYNGREV 219
Query: 236 RNLNELEFIKGEVWANVWQVWPCI 259
R LNELE+I EVWANVWQ CI
Sbjct: 220 RYLNELEYINNEVWANVWQS-DCI 242
>sp|B7VNU4|NAGK_VIBSL N-acetyl-D-glucosamine kinase OS=Vibrio splendidus (strain LGP32)
GN=nagK PE=3 SV=1
Length = 302
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 185 EFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE-F 243
EF+ + K G GL + DG+ ++ + T K +RKD+ GR V+ N+ F
Sbjct: 53 EFSCEGKIGLGLPG---MEDADDGTMLVVNVPASTGKPLRKDLEALIGRSVKIENDANCF 109
Query: 244 IKGEVWANVWQVWPCIPYAYL-QAFGSSLVY 273
E W + + P + L FG LVY
Sbjct: 110 ALSEAWDDELKDEPSVAGLILGTGFGGGLVY 140
>sp|P57331|BAMA_BUCAI Outer membrane protein assembly factor BamA OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=bamA PE=3
SV=1
Length = 617
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 16/70 (22%)
Query: 143 INQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF-------THQMKDGWG 195
I QMEG YF L LG+KL L+KT + D + KL + T+Q+K+
Sbjct: 369 IKQMEGKYFNTKLVELGKKL-----LEKTKYFSDVKIIQKLNSYDSNQIDITYQVKE--- 420
Query: 196 LATDGKVLFG 205
T G + FG
Sbjct: 421 -QTTGSINFG 429
>sp|A4R8F9|CAF17_MAGO7 Putative transferase CAF17, mitochondrial OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CAF17 PE=3
SV=1
Length = 389
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 207 DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVW 256
DG L ++D + + + I RYK R NL L+ GE A VWQ W
Sbjct: 111 DGEGFLIEVDATEAERLTRHIKRYKLRAKLNLRLLD--DGE--ATVWQAW 156
>sp|D4D1U5|SUB12_TRIVH Subtilisin-like protease 12 OS=Trichophyton verrucosum (strain HKI
0517) GN=SUB12 PE=3 SV=1
Length = 397
Score = 31.6 bits (70), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 83 GVDQSPSIYTIQVVNEFPH-DPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVE 141
G+ + SI +I++++ + + D + GL +A ND + GL G+S V ++L+TG+
Sbjct: 202 GILKKASIVSIKILDCYGYGDITRYINGLNWAINDA--KERGLLGKS-VMNISLKTGRSR 258
Query: 142 AINQ 145
A+N+
Sbjct: 259 AVNE 262
>sp|Q9KKA3|OMPB_RICCN Outer membrane protein B OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=ompB PE=1 SV=2
Length = 1655
Score = 31.2 bits (69), Expect = 8.4, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 111 LYAENDTLFESTGLYGRSSVRRVALETGKVE---AINQMEGSYFGEGLTLLGEKLFQVTW 167
L ++ND + +T LY + + + G V I G+ +G G + K QVT
Sbjct: 939 LGSDNDIIVNATTLY--AGIGTINNNQGTVTLSGGIPNTPGTVYGLGTGIGASKFKQVT- 995
Query: 168 LQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQID 216
F D NNL + + DG + T G G DG L ++
Sbjct: 996 -----FTTDYNNLGNIIATNATINDGVTVTTGGIAGIGFDGKITLGSVN 1039
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,315,754
Number of Sequences: 539616
Number of extensions: 4345122
Number of successful extensions: 31465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 29729
Number of HSP's gapped (non-prelim): 1299
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)