Query 023864
Match_columns 276
No_of_seqs 157 out of 551
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 14:04:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mbr_X Glutamine cyclotransfer 100.0 3E-57 1E-61 411.1 30.0 186 86-275 2-187 (243)
2 3nol_A Glutamine cyclotransfer 100.0 1E-55 3.6E-60 405.1 27.6 187 85-275 23-209 (262)
3 3nok_A Glutaminyl cyclase; bet 100.0 2.9E-52 9.8E-57 383.4 25.9 182 87-275 37-218 (268)
4 2iwa_A Glutamine cyclotransfer 100.0 2.2E-49 7.6E-54 362.8 30.4 188 86-275 2-189 (266)
5 3dsm_A Uncharacterized protein 99.8 4.7E-18 1.6E-22 154.0 19.3 154 118-274 5-168 (328)
6 3dsm_A Uncharacterized protein 99.8 3.4E-17 1.2E-21 148.4 21.0 166 92-269 73-256 (328)
7 2iwa_A Glutamine cyclotransfer 99.8 8.7E-17 3E-21 146.9 20.7 171 91-267 52-238 (266)
8 3c75_H MADH, methylamine dehyd 99.8 3.6E-17 1.2E-21 158.0 19.1 173 91-274 107-409 (426)
9 2mad_H Methylamine dehydrogena 99.7 2.1E-15 7.1E-20 141.2 21.8 170 92-273 56-356 (373)
10 3vgz_A Uncharacterized protein 99.7 1.8E-14 6.3E-19 126.3 25.1 173 92-270 78-266 (353)
11 3nol_A Glutamine cyclotransfer 99.6 1.5E-14 5E-19 132.4 20.5 166 91-263 73-253 (262)
12 3mbr_X Glutamine cyclotransfer 99.6 2.8E-14 9.5E-19 129.2 20.9 167 91-264 51-233 (243)
13 1mda_H Methylamine dehydrogena 99.6 4.3E-15 1.5E-19 140.6 16.1 173 91-274 54-353 (368)
14 1qks_A Cytochrome CD1 nitrite 99.6 2.1E-14 7.3E-19 142.4 20.9 166 92-266 186-421 (567)
15 3nok_A Glutaminyl cyclase; bet 99.6 2.1E-14 7.1E-19 131.9 18.8 165 91-263 83-263 (268)
16 3c75_H MADH, methylamine dehyd 99.6 1.9E-14 6.5E-19 139.0 16.6 146 116-270 85-252 (426)
17 3sjl_D Methylamine dehydrogena 99.6 2.4E-13 8.2E-18 130.1 21.5 94 92-188 68-178 (386)
18 3vgz_A Uncharacterized protein 99.6 8.5E-13 2.9E-17 115.7 22.5 172 92-274 120-310 (353)
19 2mad_H Methylamine dehydrogena 99.5 7.5E-13 2.6E-17 123.8 19.2 144 116-270 33-199 (373)
20 2oiz_A Aromatic amine dehydrog 99.5 6E-13 2.1E-17 122.6 17.6 170 92-274 40-343 (361)
21 1npe_A Nidogen, entactin; glyc 99.5 8.2E-12 2.8E-16 108.6 22.3 159 105-274 79-245 (267)
22 1nir_A Nitrite reductase; hemo 99.5 3.2E-12 1.1E-16 124.9 21.9 170 92-274 168-362 (543)
23 1qks_A Cytochrome CD1 nitrite 99.5 1.9E-12 6.4E-17 128.5 20.1 113 112-229 163-285 (567)
24 3sjl_D Methylamine dehydrogena 99.5 9.9E-13 3.4E-17 125.8 17.1 146 114-269 42-212 (386)
25 1l0q_A Surface layer protein; 99.5 9.4E-12 3.2E-16 111.4 22.3 164 93-269 22-192 (391)
26 1nir_A Nitrite reductase; hemo 99.5 3.3E-12 1.1E-16 124.8 19.8 169 92-266 211-402 (543)
27 1l0q_A Surface layer protein; 99.4 2.3E-11 7.9E-16 108.9 22.9 165 93-270 106-279 (391)
28 3u4y_A Uncharacterized protein 99.4 5.6E-12 1.9E-16 110.3 18.4 172 92-268 117-306 (331)
29 1jmx_B Amine dehydrogenase; ox 99.4 6.3E-13 2.2E-17 116.0 12.3 151 109-270 4-179 (349)
30 1mda_H Methylamine dehydrogena 99.4 5.3E-13 1.8E-17 126.2 11.4 137 116-266 32-194 (368)
31 3fvz_A Peptidyl-glycine alpha- 99.4 3.6E-11 1.2E-15 108.0 21.8 161 106-270 25-231 (329)
32 1jmx_B Amine dehydrogenase; ox 99.4 3E-11 1E-15 105.3 19.6 132 93-229 31-185 (349)
33 3fvz_A Peptidyl-glycine alpha- 99.4 1.2E-11 4.2E-16 111.1 17.5 174 93-270 79-281 (329)
34 1pby_B Quinohemoprotein amine 99.4 2E-11 6.8E-16 105.6 17.8 139 118-270 3-167 (337)
35 1fwx_A Nitrous oxide reductase 99.4 5.7E-12 2E-16 126.7 15.5 164 92-266 121-361 (595)
36 1pby_B Quinohemoprotein amine 99.4 1.9E-11 6.5E-16 105.8 16.6 135 92-230 20-174 (337)
37 3u4y_A Uncharacterized protein 99.4 2.6E-11 8.9E-16 106.1 17.2 162 96-269 76-255 (331)
38 3g4e_A Regucalcin; six bladed 99.3 1.6E-10 5.5E-15 102.4 21.4 162 105-274 54-236 (297)
39 2p4o_A Hypothetical protein; p 99.3 8.2E-11 2.8E-15 105.1 17.6 157 106-269 73-244 (306)
40 3bws_A Protein LP49; two-domai 99.3 4.2E-10 1.5E-14 102.0 21.8 166 94-270 202-394 (433)
41 2qe8_A Uncharacterized protein 99.3 1E-10 3.4E-15 106.2 17.3 160 104-268 66-280 (343)
42 2oiz_A Aromatic amine dehydrog 99.3 3.3E-11 1.1E-15 111.0 13.3 111 116-229 16-151 (361)
43 1fwx_A Nitrous oxide reductase 99.3 5.3E-11 1.8E-15 119.7 15.4 145 115-268 100-310 (595)
44 3hfq_A Uncharacterized protein 99.3 5.3E-10 1.8E-14 99.1 20.0 170 93-270 121-323 (347)
45 1rwi_B Serine/threonine-protei 99.3 2E-10 6.8E-15 97.8 16.2 154 104-268 66-224 (270)
46 3v64_C Agrin; beta propeller, 99.3 7.2E-10 2.5E-14 102.3 21.1 155 105-268 116-277 (349)
47 1ijq_A LDL receptor, low-densi 99.3 1.5E-09 5.1E-14 98.4 22.7 157 105-269 77-241 (316)
48 2p4o_A Hypothetical protein; p 99.2 3E-09 1E-13 94.9 23.7 171 88-266 17-198 (306)
49 3v65_B Low-density lipoprotein 99.2 9.6E-10 3.3E-14 102.8 21.3 155 105-268 159-320 (386)
50 2z2n_A Virginiamycin B lyase; 99.2 1.4E-09 4.8E-14 92.9 20.4 152 103-268 97-256 (299)
51 3bws_A Protein LP49; two-domai 99.2 1.8E-09 6.2E-14 97.8 21.6 157 104-270 169-338 (433)
52 1npe_A Nidogen, entactin; glyc 99.2 1.4E-09 4.9E-14 94.4 19.6 154 106-268 37-200 (267)
53 3hrp_A Uncharacterized protein 99.2 9.4E-10 3.2E-14 103.7 19.9 158 106-267 132-299 (409)
54 1q7f_A NHL, brain tumor CG1071 99.2 4.9E-09 1.7E-13 90.6 22.9 162 94-266 110-280 (286)
55 2qe8_A Uncharacterized protein 99.2 2.4E-09 8.2E-14 97.0 21.4 164 92-265 8-225 (343)
56 2qc5_A Streptogramin B lactona 99.2 4.7E-09 1.6E-13 89.7 21.4 153 104-270 61-221 (300)
57 3scy_A Hypothetical bacterial 99.2 1.9E-09 6.4E-14 96.3 19.2 155 107-270 157-343 (361)
58 3hfq_A Uncharacterized protein 99.2 1.6E-09 5.6E-14 95.9 18.5 168 94-268 31-222 (347)
59 1q7f_A NHL, brain tumor CG1071 99.2 3.9E-09 1.3E-13 91.2 19.9 152 105-266 30-194 (286)
60 2ece_A 462AA long hypothetical 99.2 7.8E-10 2.7E-14 108.3 17.0 133 94-229 59-247 (462)
61 1ri6_A Putative isomerase YBHE 99.2 5.4E-09 1.9E-13 90.5 20.5 169 94-274 120-319 (343)
62 2ece_A 462AA long hypothetical 99.2 1.5E-09 5.3E-14 106.2 18.9 176 91-267 172-428 (462)
63 1ri6_A Putative isomerase YBHE 99.2 4.1E-09 1.4E-13 91.2 19.5 164 92-265 27-208 (343)
64 3p5b_L Low density lipoprotein 99.2 9.1E-09 3.1E-13 96.9 23.4 159 104-269 158-323 (400)
65 2z2n_A Virginiamycin B lyase; 99.2 1.1E-08 3.7E-13 87.3 21.8 162 96-270 5-174 (299)
66 3sov_A LRP-6, low-density lipo 99.1 5.4E-09 1.9E-13 95.9 20.0 156 105-269 79-241 (318)
67 1rwi_B Serine/threonine-protei 99.1 2E-09 6.7E-14 91.6 15.6 153 105-267 108-265 (270)
68 2dg1_A DRP35, lactonase; beta 99.1 1E-08 3.4E-13 90.3 20.6 160 104-269 86-265 (333)
69 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 4.6E-09 1.6E-13 91.0 17.4 159 105-269 71-259 (314)
70 3no2_A Uncharacterized protein 99.1 2.9E-08 9.9E-13 88.6 22.8 166 92-270 24-199 (276)
71 2fp8_A Strictosidine synthase; 99.1 2.6E-09 9E-14 95.4 15.9 158 105-268 126-315 (322)
72 2fp8_A Strictosidine synthase; 99.1 4.4E-09 1.5E-13 93.9 17.0 154 106-270 81-272 (322)
73 1ijq_A LDL receptor, low-densi 99.1 3.3E-08 1.1E-12 89.5 22.8 153 105-266 30-195 (316)
74 3v65_B Low-density lipoprotein 99.1 1.8E-08 6.1E-13 94.2 20.7 155 104-267 115-278 (386)
75 2qc5_A Streptogramin B lactona 99.1 5.4E-08 1.9E-12 83.0 22.0 164 94-270 8-179 (300)
76 1jof_A Carboxy-CIS,CIS-muconat 99.0 2.3E-08 7.9E-13 90.6 20.3 165 96-266 136-341 (365)
77 3v64_C Agrin; beta propeller, 99.0 2.1E-08 7.3E-13 92.5 19.7 154 105-267 73-235 (349)
78 3m0c_C LDL receptor, low-densi 99.0 2.2E-08 7.4E-13 103.4 21.8 158 104-268 470-634 (791)
79 3no2_A Uncharacterized protein 99.0 3.7E-08 1.3E-12 87.8 19.6 173 94-271 66-257 (276)
80 3p5b_L Low density lipoprotein 99.0 6.7E-08 2.3E-12 91.0 21.2 154 105-267 112-278 (400)
81 3q7m_A Lipoprotein YFGL, BAMB; 99.0 3.9E-07 1.3E-11 82.3 24.8 173 91-270 26-211 (376)
82 3hrp_A Uncharacterized protein 99.0 7.8E-08 2.7E-12 90.5 20.9 154 104-265 218-409 (409)
83 4a0p_A LRP6, LRP-6, low-densit 99.0 1.4E-07 5E-12 94.5 23.8 153 106-268 81-239 (628)
84 4hw6_A Hypothetical protein, I 98.9 4E-08 1.4E-12 93.8 18.6 157 105-265 228-432 (433)
85 2ghs_A AGR_C_1268P; regucalcin 98.9 6.1E-08 2.1E-12 87.3 18.7 152 106-269 91-262 (326)
86 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 1.6E-08 5.3E-13 87.7 13.9 154 105-268 117-301 (314)
87 3sov_A LRP-6, low-density lipo 98.9 7.4E-08 2.5E-12 88.3 18.8 151 108-266 38-197 (318)
88 3e5z_A Putative gluconolactona 98.9 1.3E-07 4.6E-12 82.3 19.5 155 103-269 67-248 (296)
89 3tc9_A Hypothetical hydrolase; 98.9 3.9E-08 1.3E-12 93.6 17.2 151 106-266 138-301 (430)
90 1n7d_A LDL receptor, low-densi 98.9 2E-09 6.8E-14 109.0 8.6 158 106-270 454-618 (699)
91 3tc9_A Hypothetical hydrolase; 98.9 4.7E-08 1.6E-12 93.0 17.4 155 107-265 228-429 (430)
92 2dg1_A DRP35, lactonase; beta 98.9 5.8E-07 2E-11 79.0 23.0 163 92-266 33-213 (333)
93 3m0c_C LDL receptor, low-densi 98.9 1E-07 3.6E-12 98.3 20.9 155 105-267 424-590 (791)
94 1jof_A Carboxy-CIS,CIS-muconat 98.9 9.3E-08 3.2E-12 86.6 17.9 167 93-269 28-229 (365)
95 3qqz_A Putative uncharacterize 98.9 7.9E-07 2.7E-11 80.4 23.6 172 91-269 13-206 (255)
96 3s94_A LRP-6, low-density lipo 98.9 1.1E-07 3.7E-12 95.1 19.4 154 105-269 84-246 (619)
97 3scy_A Hypothetical bacterial 98.8 9.4E-08 3.2E-12 85.2 14.7 120 104-225 210-345 (361)
98 4hw6_A Hypothetical protein, I 98.8 1.4E-07 5E-12 90.0 16.1 148 106-265 140-303 (433)
99 1gxr_A ESG1, transducin-like e 98.8 2E-06 6.8E-11 73.9 21.0 165 95-270 133-300 (337)
100 3g4e_A Regucalcin; six bladed 98.8 2.8E-06 9.5E-11 74.9 22.5 151 102-268 10-184 (297)
101 4a0p_A LRP6, LRP-6, low-densit 98.8 1.2E-06 4.3E-11 87.7 22.6 154 106-268 390-551 (628)
102 3kya_A Putative phosphatase; s 98.7 1.7E-07 5.7E-12 92.4 15.4 150 107-265 141-340 (496)
103 3dr2_A Exported gluconolactona 98.7 4.9E-07 1.7E-11 80.0 17.0 158 103-269 84-269 (305)
104 3s94_A LRP-6, low-density lipo 98.7 1.8E-06 6.3E-11 86.3 22.7 156 105-269 392-554 (619)
105 1sq9_A Antiviral protein SKI8; 98.7 1.6E-06 5.6E-11 77.0 19.9 160 103-268 185-397 (397)
106 1erj_A Transcriptional repress 98.7 5.4E-06 1.8E-10 75.7 23.7 170 89-270 51-242 (393)
107 3e5z_A Putative gluconolactona 98.7 8.6E-07 3E-11 77.1 17.2 148 106-268 116-288 (296)
108 2vdu_B TRNA (guanine-N(7)-)-me 98.7 2.7E-06 9.3E-11 78.7 21.2 157 105-270 196-397 (450)
109 3zwl_B Eukaryotic translation 98.7 2.8E-06 9.4E-11 73.7 19.6 167 104-274 32-214 (369)
110 4ery_A WD repeat-containing pr 98.7 8.2E-06 2.8E-10 70.9 22.4 168 93-270 13-184 (312)
111 3q7m_A Lipoprotein YFGL, BAMB; 98.7 3E-06 1E-10 76.4 20.0 162 94-270 124-300 (376)
112 1gxr_A ESG1, transducin-like e 98.7 4.7E-06 1.6E-10 71.5 20.2 157 104-269 97-258 (337)
113 3zwl_B Eukaryotic translation 98.7 1.9E-06 6.4E-11 74.8 17.8 166 94-270 65-253 (369)
114 4ery_A WD repeat-containing pr 98.6 5.9E-06 2E-10 71.8 20.1 170 94-270 98-272 (312)
115 2ynn_A Coatomer subunit beta'; 98.6 3.6E-06 1.2E-10 73.9 18.9 166 94-268 4-174 (304)
116 3dr2_A Exported gluconolactona 98.6 9.2E-07 3.1E-11 78.2 14.7 144 106-264 132-304 (305)
117 1n7d_A LDL receptor, low-densi 98.6 3.6E-08 1.2E-12 99.7 6.3 151 106-266 407-571 (699)
118 3ow8_A WD repeat-containing pr 98.6 2.1E-05 7.2E-10 70.2 22.6 167 94-270 113-283 (321)
119 4gqb_B Methylosome protein 50; 98.6 3E-06 1E-10 77.2 17.2 157 104-269 127-292 (344)
120 3qqz_A Putative uncharacterize 98.6 1.5E-05 5.1E-10 72.0 21.5 170 93-267 58-254 (255)
121 4aez_A CDC20, WD repeat-contai 98.6 6.5E-06 2.2E-10 74.8 19.3 160 104-270 217-384 (401)
122 1r5m_A SIR4-interacting protei 98.5 2.3E-06 7.8E-11 75.7 15.6 167 94-270 140-323 (425)
123 3i2n_A WD repeat-containing pr 98.5 3.8E-06 1.3E-10 72.9 16.5 164 104-269 18-202 (357)
124 1kb0_A Quinohemoprotein alcoho 98.5 7.8E-06 2.7E-10 82.1 20.2 154 108-270 246-511 (677)
125 2ad6_A Methanol dehydrogenase 98.5 1.9E-05 6.6E-10 77.8 22.4 154 109-270 239-498 (571)
126 3k26_A Polycomb protein EED; W 98.5 2.5E-05 8.6E-10 67.7 20.6 171 91-268 5-194 (366)
127 3ow8_A WD repeat-containing pr 98.5 2.4E-05 8.3E-10 69.8 20.7 157 104-270 80-241 (321)
128 1got_B GT-beta; complex (GTP-b 98.5 3.8E-05 1.3E-09 68.4 21.8 166 94-270 88-261 (340)
129 2ghs_A AGR_C_1268P; regucalcin 98.5 7.8E-05 2.7E-09 66.9 23.6 153 98-267 42-213 (326)
130 1erj_A Transcriptional repress 98.4 2.5E-05 8.6E-10 71.2 20.4 170 94-270 156-345 (393)
131 2ynn_A Coatomer subunit beta'; 98.4 7.4E-05 2.5E-09 65.5 21.9 167 94-269 88-262 (304)
132 4aez_A CDC20, WD repeat-contai 98.4 5.1E-05 1.7E-09 68.9 21.5 166 95-270 125-297 (401)
133 3vl1_A 26S proteasome regulato 98.4 1.1E-05 3.7E-10 72.4 16.5 168 94-271 130-327 (420)
134 2ovr_B FBW7, F-BOX/WD repeat p 98.4 8.8E-05 3E-09 67.9 22.9 167 93-266 269-442 (445)
135 2aq5_A Coronin-1A; WD40 repeat 98.4 1E-05 3.5E-10 73.2 16.5 159 104-269 81-257 (402)
136 3kya_A Putative phosphatase; s 98.4 3.8E-06 1.3E-10 82.8 14.5 158 107-268 188-411 (496)
137 2ovr_B FBW7, F-BOX/WD repeat p 98.4 4.4E-05 1.5E-09 70.0 20.4 155 105-270 240-395 (445)
138 2aq5_A Coronin-1A; WD40 repeat 98.4 3.9E-05 1.3E-09 69.3 19.4 159 104-269 131-302 (402)
139 3amr_A 3-phytase; beta-propell 98.3 4.1E-06 1.4E-10 79.5 12.9 117 108-230 131-275 (355)
140 1sq9_A Antiviral protein SKI8; 98.3 1.3E-05 4.3E-10 71.2 15.2 163 105-270 122-326 (397)
141 1got_B GT-beta; complex (GTP-b 98.3 0.00011 3.6E-09 65.5 21.3 168 94-270 134-305 (340)
142 2p9w_A MAL S 1 allergenic prot 98.3 3.1E-05 1.1E-09 73.0 18.5 158 106-266 64-265 (334)
143 3vl1_A 26S proteasome regulato 98.3 7.4E-05 2.5E-09 66.9 20.2 164 95-266 173-365 (420)
144 2hqs_A Protein TOLB; TOLB, PAL 98.3 2.1E-05 7.1E-10 73.1 17.2 157 105-269 179-347 (415)
145 3mkq_A Coatomer beta'-subunit; 98.3 3.9E-05 1.3E-09 75.0 19.8 164 95-268 5-174 (814)
146 1r5m_A SIR4-interacting protei 98.3 2.2E-05 7.5E-10 69.3 16.4 171 93-269 36-239 (425)
147 1p22_A F-BOX/WD-repeat protein 98.3 0.00015 5.2E-09 66.5 22.5 163 94-270 164-329 (435)
148 1nr0_A Actin interacting prote 98.3 9.7E-05 3.3E-09 71.7 22.1 167 94-269 181-358 (611)
149 4g56_B MGC81050 protein; prote 98.3 6.8E-06 2.3E-10 74.5 13.1 157 104-269 139-304 (357)
150 1vyh_C Platelet-activating fac 98.3 2.9E-05 9.8E-10 71.5 17.4 158 104-270 108-269 (410)
151 2ism_A Putative oxidoreductase 98.3 5.6E-05 1.9E-09 69.7 19.2 158 91-265 21-240 (352)
152 4gqb_B Methylosome protein 50; 98.3 3.5E-05 1.2E-09 70.1 17.4 164 93-266 159-331 (344)
153 2ad6_A Methanol dehydrogenase 98.3 4E-05 1.4E-09 75.5 19.0 160 107-271 108-340 (571)
154 4h5i_A Guanine nucleotide-exch 98.3 4.7E-05 1.6E-09 69.2 18.2 162 102-270 131-304 (365)
155 3v7d_B Cell division control p 98.3 0.00011 3.7E-09 67.2 20.3 149 94-252 301-450 (464)
156 3fm0_A Protein CIAO1; WDR39,SG 98.3 7.9E-05 2.7E-09 66.7 19.0 172 92-268 4-183 (345)
157 3odt_A Protein DOA1; ubiquitin 98.3 0.00018 6E-09 61.1 20.2 153 104-269 142-299 (313)
158 1pgu_A Actin interacting prote 98.3 0.00011 3.6E-09 68.8 20.5 162 104-269 160-331 (615)
159 3mmy_A MRNA export factor; mRN 98.3 0.00018 6.2E-09 62.1 20.6 154 104-268 39-201 (368)
160 1k8k_C P40, ARP2/3 complex 41 98.3 0.00013 4.6E-09 63.6 19.9 168 94-270 43-237 (372)
161 1vyh_C Platelet-activating fac 98.3 7.6E-05 2.6E-09 68.7 19.1 166 95-270 142-331 (410)
162 2pm9_A Protein WEB1, protein t 98.3 3.1E-05 1.1E-09 68.9 16.0 156 105-268 166-339 (416)
163 3lrv_A PRE-mRNA-splicing facto 98.3 1E-05 3.4E-10 72.0 12.7 170 93-267 114-293 (343)
164 2vdu_B TRNA (guanine-N(7)-)-me 98.2 2.1E-05 7.3E-10 72.6 14.9 156 105-270 103-275 (450)
165 3v7d_B Cell division control p 98.2 0.00053 1.8E-08 62.6 24.1 166 94-270 153-345 (464)
166 3gre_A Serine/threonine-protei 98.2 0.00011 3.7E-09 66.7 19.1 167 96-271 105-297 (437)
167 1k8k_C P40, ARP2/3 complex 41 98.2 0.00014 4.8E-09 63.4 19.1 154 104-266 96-274 (372)
168 2pbi_B Guanine nucleotide-bind 98.2 0.00012 4.3E-09 65.9 19.3 161 104-270 154-319 (354)
169 3k26_A Polycomb protein EED; W 98.2 3.1E-05 1.1E-09 67.1 14.6 158 105-268 70-262 (366)
170 3mkq_A Coatomer beta'-subunit; 98.2 0.00022 7.4E-09 69.8 22.0 168 94-270 88-263 (814)
171 3ei3_B DNA damage-binding prot 98.2 0.00043 1.5E-08 61.6 22.1 163 93-266 63-236 (383)
172 1kb0_A Quinohemoprotein alcoho 98.2 5.9E-05 2E-09 75.7 18.3 120 126-252 335-537 (677)
173 3mmy_A MRNA export factor; mRN 98.2 0.00063 2.2E-08 58.7 22.5 111 104-219 86-199 (368)
174 3hxj_A Pyrrolo-quinoline quino 98.2 5.5E-05 1.9E-09 65.6 15.6 148 105-270 137-287 (330)
175 1p22_A F-BOX/WD-repeat protein 98.2 0.00017 5.7E-09 66.2 19.4 152 109-270 138-289 (435)
176 2pbi_B Guanine nucleotide-bind 98.2 0.0011 3.9E-08 59.5 24.4 167 94-269 55-274 (354)
177 2z3z_A Dipeptidyl aminopeptida 98.2 3E-05 1E-09 75.4 14.8 152 107-267 84-294 (706)
178 2ism_A Putative oxidoreductase 98.2 3.4E-05 1.2E-09 71.1 14.3 162 104-268 74-299 (352)
179 4g56_B MGC81050 protein; prote 98.2 4.6E-05 1.6E-09 69.0 14.8 166 93-268 171-345 (357)
180 4ggc_A P55CDC, cell division c 98.1 0.00045 1.5E-08 58.8 20.2 166 92-268 13-183 (318)
181 1pgu_A Actin interacting prote 98.1 0.00045 1.5E-08 64.5 21.8 169 94-270 107-287 (615)
182 2hqs_A Protein TOLB; TOLB, PAL 98.1 5.2E-05 1.8E-09 70.5 15.1 152 106-268 224-389 (415)
183 2p9w_A MAL S 1 allergenic prot 98.1 0.00025 8.4E-09 66.8 19.6 159 102-266 10-215 (334)
184 4aow_A Guanine nucleotide-bind 98.1 8.9E-05 3E-09 63.9 15.1 123 94-221 206-339 (340)
185 3odt_A Protein DOA1; ubiquitin 98.1 0.00015 5.2E-09 61.5 16.3 129 95-228 175-305 (313)
186 3gre_A Serine/threonine-protei 98.1 0.00024 8.1E-09 64.4 18.5 161 105-268 169-361 (437)
187 3i2n_A WD repeat-containing pr 98.1 0.00016 5.4E-09 62.6 16.6 160 96-267 59-244 (357)
188 4a11_B DNA excision repair pro 98.1 0.00011 3.9E-09 64.5 15.6 156 104-268 43-220 (408)
189 4a11_B DNA excision repair pro 98.1 7.2E-05 2.5E-09 65.8 14.2 163 104-269 99-279 (408)
190 3sre_A PON1, serum paraoxonase 98.1 9.1E-05 3.1E-09 69.8 15.4 154 105-265 112-297 (355)
191 3frx_A Guanine nucleotide-bind 98.0 0.0025 8.5E-08 56.2 23.6 163 96-269 58-230 (319)
192 3frx_A Guanine nucleotide-bind 98.0 0.00074 2.5E-08 59.6 20.1 160 94-266 98-267 (319)
193 3a9g_A Putative uncharacterize 98.0 0.00091 3.1E-08 61.9 21.5 163 90-264 18-229 (354)
194 3dw8_B Serine/threonine-protei 98.0 0.00021 7.3E-09 64.3 16.6 168 98-270 171-377 (447)
195 1w6s_A Methanol dehydrogenase 98.0 0.00031 1.1E-08 70.1 19.1 161 107-271 108-347 (599)
196 2oaj_A Protein SNI1; WD40 repe 98.0 0.00061 2.1E-08 70.3 21.9 169 91-270 6-186 (902)
197 3a9g_A Putative uncharacterize 98.0 0.00051 1.7E-08 63.5 19.2 166 95-266 125-352 (354)
198 3jrp_A Fusion protein of prote 98.0 0.00026 8.7E-09 61.6 15.9 158 104-268 11-193 (379)
199 1kv9_A Type II quinohemoprotei 98.0 0.00042 1.5E-08 69.3 19.6 156 107-270 110-337 (668)
200 3hxj_A Pyrrolo-quinoline quino 98.0 0.00016 5.4E-09 62.7 14.5 153 95-266 168-323 (330)
201 3iz6_a 40S ribosomal protein R 98.0 0.00027 9.1E-09 64.1 16.6 161 103-269 204-378 (380)
202 1yiq_A Quinohemoprotein alcoho 98.0 0.00061 2.1E-08 68.5 20.7 158 107-270 114-342 (689)
203 2ecf_A Dipeptidyl peptidase IV 98.0 8.8E-05 3E-09 72.4 13.9 154 107-270 111-325 (741)
204 2pm9_A Protein WEB1, protein t 98.0 3.1E-05 1E-09 69.0 9.8 168 95-270 105-298 (416)
205 3sre_A PON1, serum paraoxonase 98.0 0.00013 4.4E-09 68.8 14.4 155 92-250 152-343 (355)
206 3sfz_A APAF-1, apoptotic pepti 98.0 0.0007 2.4E-08 70.0 21.0 157 104-269 615-777 (1249)
207 4aow_A Guanine nucleotide-bind 98.0 0.0019 6.6E-08 55.4 20.7 155 104-268 128-288 (340)
208 3pe7_A Oligogalacturonate lyas 98.0 0.00039 1.3E-08 61.6 16.7 149 110-268 41-227 (388)
209 1nr0_A Actin interacting prote 98.0 0.00046 1.6E-08 66.9 18.5 158 104-268 147-315 (611)
210 1yiq_A Quinohemoprotein alcoho 97.9 0.00049 1.7E-08 69.2 19.3 76 170-252 455-535 (689)
211 2ojh_A Uncharacterized protein 97.9 0.00036 1.2E-08 58.0 15.4 155 105-269 85-261 (297)
212 4gga_A P55CDC, cell division c 97.9 0.0015 5.3E-08 59.5 20.7 170 89-268 90-263 (420)
213 3ei3_B DNA damage-binding prot 97.9 0.0017 5.9E-08 57.6 20.4 156 104-269 118-285 (383)
214 2z3z_A Dipeptidyl aminopeptida 97.9 0.00044 1.5E-08 67.2 17.7 136 126-268 233-393 (706)
215 4h5i_A Guanine nucleotide-exch 97.9 0.0025 8.5E-08 57.8 21.3 164 93-266 167-343 (365)
216 1kv9_A Type II quinohemoprotei 97.9 0.00011 3.7E-09 73.6 13.3 114 156-271 63-192 (668)
217 3sfz_A APAF-1, apoptotic pepti 97.9 0.00077 2.6E-08 69.7 19.8 170 94-270 648-832 (1249)
218 3jrp_A Fusion protein of prote 97.9 0.0015 5.3E-08 56.6 19.0 172 92-268 44-242 (379)
219 3f3f_A Nucleoporin SEH1; struc 97.9 0.00058 2E-08 57.8 15.9 117 104-223 11-147 (351)
220 3o4h_A Acylamino-acid-releasin 97.9 0.00041 1.4E-08 66.1 16.5 155 105-270 65-231 (582)
221 1yfq_A Cell cycle arrest prote 97.9 0.00013 4.5E-09 63.1 11.9 152 104-268 11-182 (342)
222 2xn4_A Kelch-like protein 2; s 97.9 0.0016 5.3E-08 57.0 18.9 153 109-268 103-278 (302)
223 3pe7_A Oligogalacturonate lyas 97.9 0.00037 1.3E-08 61.7 15.1 161 105-266 188-384 (388)
224 2vpj_A Kelch-like protein 12; 97.9 0.0022 7.4E-08 56.0 19.7 154 109-268 107-280 (301)
225 2hz6_A Endoplasmic reticulum t 97.9 1.4E-06 4.9E-11 80.3 -0.8 141 115-269 9-152 (369)
226 2ojh_A Uncharacterized protein 97.9 0.00049 1.7E-08 57.2 14.8 143 117-269 11-165 (297)
227 3lrv_A PRE-mRNA-splicing facto 97.9 0.00046 1.6E-08 61.2 15.3 111 106-220 172-293 (343)
228 2xn4_A Kelch-like protein 2; s 97.8 0.0029 9.9E-08 55.3 20.2 153 109-268 56-231 (302)
229 2hz6_A Endoplasmic reticulum t 97.8 2.2E-06 7.5E-11 79.1 -0.0 148 114-270 47-196 (369)
230 2ymu_A WD-40 repeat protein; u 97.8 0.003 1E-07 59.0 21.4 161 95-269 377-541 (577)
231 2g8s_A Glucose/sorbosone dehyd 97.8 0.00043 1.5E-08 63.8 15.4 165 95-265 118-353 (353)
232 2oaj_A Protein SNI1; WD40 repe 97.8 0.0011 3.6E-08 68.5 19.1 166 94-270 50-246 (902)
233 3ii7_A Kelch-like protein 7; p 97.8 0.0025 8.5E-08 55.8 18.9 153 109-268 50-227 (306)
234 2vpj_A Kelch-like protein 12; 97.8 0.0038 1.3E-07 54.4 19.9 153 109-268 57-233 (301)
235 3iz6_a 40S ribosomal protein R 97.8 0.0019 6.6E-08 58.3 18.4 164 104-270 157-333 (380)
236 3ii7_A Kelch-like protein 7; p 97.8 0.0031 1.1E-07 55.2 19.1 165 95-268 84-274 (306)
237 2xzm_R RACK1; ribosome, transl 97.8 0.0026 8.9E-08 56.4 18.6 163 94-268 109-287 (343)
238 3dw8_B Serine/threonine-protei 97.8 0.00039 1.3E-08 62.5 13.3 115 104-223 226-377 (447)
239 2xdw_A Prolyl endopeptidase; a 97.7 0.00081 2.8E-08 66.4 16.6 156 107-268 127-322 (710)
240 4gq1_A NUP37; propeller, trans 97.7 0.0012 4.2E-08 60.2 16.5 165 103-271 135-353 (393)
241 3dwl_C Actin-related protein 2 97.7 0.00012 4.2E-09 64.6 9.6 170 94-269 46-239 (377)
242 3azo_A Aminopeptidase; POP fam 97.7 0.00016 5.4E-09 69.7 11.0 161 106-268 131-327 (662)
243 1yfq_A Cell cycle arrest prote 97.7 0.00047 1.6E-08 59.5 12.9 162 95-267 49-226 (342)
244 3azo_A Aminopeptidase; POP fam 97.7 0.001 3.6E-08 64.0 16.5 159 105-270 188-373 (662)
245 3vu4_A KMHSV2; beta-propeller 97.7 0.0049 1.7E-07 55.4 20.0 151 109-267 63-272 (355)
246 3dm0_A Maltose-binding peripla 97.7 0.0016 5.4E-08 63.7 17.7 164 95-269 464-635 (694)
247 4ggc_A P55CDC, cell division c 97.7 0.0057 2E-07 51.9 19.1 125 94-222 56-184 (318)
248 2oit_A Nucleoporin 214KDA; NH2 97.7 0.00022 7.4E-09 67.2 11.0 149 96-250 86-255 (434)
249 3vu4_A KMHSV2; beta-propeller 97.7 0.0022 7.7E-08 57.6 17.2 118 104-227 19-137 (355)
250 1zgk_A Kelch-like ECH-associat 97.7 0.0026 8.8E-08 56.2 17.3 153 109-268 116-289 (308)
251 2xyi_A Probable histone-bindin 97.7 0.0006 2E-08 62.8 13.6 154 104-266 231-410 (430)
252 3dm0_A Maltose-binding peripla 97.7 0.00063 2.1E-08 66.6 14.4 121 94-219 552-693 (694)
253 2ymu_A WD-40 repeat protein; u 97.7 0.0045 1.5E-07 57.8 19.6 157 95-264 295-455 (577)
254 1flg_A Protein (quinoprotein e 97.7 0.0026 8.8E-08 62.9 18.8 77 169-252 465-546 (582)
255 4gga_A P55CDC, cell division c 97.7 0.00091 3.1E-08 61.1 14.5 122 104-225 276-401 (420)
256 3amr_A 3-phytase; beta-propell 97.6 0.0032 1.1E-07 59.7 18.4 150 118-274 89-271 (355)
257 3o4h_A Acylamino-acid-releasin 97.6 0.00076 2.6E-08 64.3 14.2 146 109-264 114-274 (582)
258 2ecf_A Dipeptidyl peptidase IV 97.6 0.00031 1E-08 68.5 11.6 114 107-224 39-186 (741)
259 2xyi_A Probable histone-bindin 97.6 0.00097 3.3E-08 61.3 14.4 169 92-272 118-315 (430)
260 3iuj_A Prolyl endopeptidase; h 97.6 0.0019 6.6E-08 64.0 17.0 157 106-268 130-316 (693)
261 1zgk_A Kelch-like ECH-associat 97.6 0.0027 9.2E-08 56.0 16.2 153 109-268 65-242 (308)
262 1xfd_A DIP, dipeptidyl aminope 97.6 0.00041 1.4E-08 67.3 11.8 162 107-270 63-293 (723)
263 3q6k_A 43.2 kDa salivary prote 97.6 0.005 1.7E-07 58.7 19.1 159 106-266 88-306 (381)
264 1w6s_A Methanol dehydrogenase 97.6 0.00045 1.5E-08 69.0 12.4 112 156-270 59-195 (599)
265 2woz_A Kelch repeat and BTB do 97.6 0.0039 1.3E-07 55.1 17.1 153 109-268 104-289 (318)
266 1flg_A Protein (quinoprotein e 97.6 0.00039 1.3E-08 68.8 11.3 113 156-270 65-197 (582)
267 2xdw_A Prolyl endopeptidase; a 97.5 0.0048 1.6E-07 60.9 18.8 158 108-268 174-370 (710)
268 2g8s_A Glucose/sorbosone dehyd 97.5 0.0016 5.5E-08 60.0 14.3 162 89-264 6-229 (353)
269 1k32_A Tricorn protease; prote 97.5 0.00055 1.9E-08 70.8 12.2 150 106-268 297-463 (1045)
270 4asc_A Kelch repeat and BTB do 97.5 0.0028 9.5E-08 56.0 14.7 153 109-268 93-279 (315)
271 3f3f_A Nucleoporin SEH1; struc 97.5 0.0025 8.6E-08 53.8 13.8 124 94-220 101-250 (351)
272 2gop_A Trilobed protease; beta 97.5 0.006 2E-07 53.2 16.5 110 107-222 61-210 (347)
273 3dwl_C Actin-related protein 2 97.5 0.00025 8.5E-09 62.6 7.6 154 104-266 100-281 (377)
274 1cru_A Protein (soluble quinop 97.5 0.004 1.4E-07 59.8 16.6 113 89-208 15-162 (454)
275 2hes_X YDR267CP; beta-propelle 97.5 0.041 1.4E-06 48.5 21.9 165 92-267 3-185 (330)
276 3c5m_A Oligogalacturonate lyas 97.4 0.0013 4.4E-08 58.0 11.9 152 107-268 38-227 (396)
277 1z68_A Fibroblast activation p 97.4 0.00026 8.9E-09 69.1 8.1 158 107-268 62-293 (719)
278 3s25_A Hypothetical 7-bladed b 97.4 0.0091 3.1E-07 54.3 17.8 143 109-268 19-178 (302)
279 4a5s_A Dipeptidyl peptidase 4 97.4 0.00077 2.6E-08 67.0 11.4 157 108-268 65-296 (740)
280 3das_A Putative oxidoreductase 97.4 0.0024 8.1E-08 60.0 13.6 166 93-264 128-346 (347)
281 4e54_B DNA damage-binding prot 97.4 0.00079 2.7E-08 61.9 10.1 121 104-228 209-336 (435)
282 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.02 6.8E-07 50.9 18.9 156 103-264 60-223 (345)
283 2bkl_A Prolyl endopeptidase; m 97.4 0.0026 8.8E-08 62.7 14.1 154 107-268 123-306 (695)
284 2xzm_R RACK1; ribosome, transl 97.3 0.073 2.5E-06 46.9 22.2 124 92-219 10-149 (343)
285 3iuj_A Prolyl endopeptidase; h 97.3 0.018 6.2E-07 57.0 19.4 161 105-270 234-409 (693)
286 4a2l_A BT_4663, two-component 97.3 0.013 4.5E-07 58.6 18.5 150 104-269 451-617 (795)
287 2woz_A Kelch repeat and BTB do 97.3 0.011 3.6E-07 52.3 16.0 153 109-268 51-233 (318)
288 2j04_A TAU60, YPL007P, hypothe 97.3 0.0035 1.2E-07 63.0 14.3 156 103-268 14-213 (588)
289 2gop_A Trilobed protease; beta 97.3 0.018 6.2E-07 50.1 17.2 128 127-268 42-209 (347)
290 2w18_A PALB2, fancn, partner a 97.2 0.041 1.4E-06 52.1 20.3 149 108-263 182-354 (356)
291 3c5m_A Oligogalacturonate lyas 97.2 0.0062 2.1E-07 53.6 13.8 111 107-222 240-387 (396)
292 1z68_A Fibroblast activation p 97.2 0.0012 4E-08 64.4 9.7 109 109-223 20-143 (719)
293 3jro_A Fusion protein of prote 97.2 0.0046 1.6E-07 61.9 14.1 158 104-268 9-191 (753)
294 1xfd_A DIP, dipeptidyl aminope 97.2 0.0012 4.2E-08 63.9 9.5 113 108-226 20-150 (723)
295 3jro_A Fusion protein of prote 97.2 0.019 6.4E-07 57.4 18.0 170 93-267 43-239 (753)
296 4asc_A Kelch repeat and BTB do 97.1 0.008 2.7E-07 53.0 13.6 115 109-225 143-283 (315)
297 4e54_B DNA damage-binding prot 97.1 0.0051 1.8E-07 56.4 12.8 159 99-268 116-284 (435)
298 1k32_A Tricorn protease; prote 97.1 0.02 6.8E-07 59.2 18.2 99 104-206 378-489 (1045)
299 2w18_A PALB2, fancn, partner a 97.1 0.085 2.9E-06 49.9 21.0 155 116-274 145-321 (356)
300 2uvk_A YJHT; unknown function, 97.1 0.038 1.3E-06 49.3 17.4 148 115-268 19-230 (357)
301 2pm7_B Protein transport prote 97.0 0.029 9.9E-07 48.6 16.1 115 104-221 9-134 (297)
302 3v9f_A Two-component system se 97.0 0.035 1.2E-06 55.4 18.5 154 104-269 449-614 (781)
303 3das_A Putative oxidoreductase 97.0 0.055 1.9E-06 50.7 18.7 151 106-263 33-232 (347)
304 3bg1_A Protein SEC13 homolog; 97.0 0.011 3.9E-07 51.8 13.2 124 95-220 4-137 (316)
305 1yr2_A Prolyl oligopeptidase; 97.0 0.039 1.3E-06 54.8 18.6 158 105-269 268-444 (741)
306 3s25_A Hypothetical 7-bladed b 97.0 0.034 1.2E-06 50.5 16.7 140 116-269 65-219 (302)
307 4a2l_A BT_4663, two-component 97.0 0.028 9.4E-07 56.3 17.4 152 105-269 406-574 (795)
308 1k3i_A Galactose oxidase precu 97.0 0.0044 1.5E-07 61.1 11.2 127 97-224 235-383 (656)
309 3q6k_A 43.2 kDa salivary prote 96.9 0.052 1.8E-06 51.7 18.1 153 94-252 136-341 (381)
310 2j04_A TAU60, YPL007P, hypothe 96.9 0.032 1.1E-06 56.1 16.8 151 104-269 85-257 (588)
311 2hes_X YDR267CP; beta-propelle 96.9 0.14 4.7E-06 45.1 19.1 124 94-220 47-185 (330)
312 1yr2_A Prolyl oligopeptidase; 96.8 0.019 6.5E-07 57.1 14.8 154 107-267 165-351 (741)
313 3v9f_A Two-component system se 96.8 0.032 1.1E-06 55.7 16.3 154 105-268 407-570 (781)
314 2pm7_B Protein transport prote 96.7 0.065 2.2E-06 46.3 15.8 168 95-267 45-239 (297)
315 2oit_A Nucleoporin 214KDA; NH2 96.6 0.025 8.7E-07 53.0 13.3 156 104-266 149-333 (434)
316 1cru_A Protein (soluble quinop 96.6 0.026 9E-07 54.1 13.4 103 152-254 29-163 (454)
317 2j04_B YDR362CP, TAU91; beta p 96.6 0.017 5.7E-07 56.2 12.0 120 104-227 266-394 (524)
318 2j04_B YDR362CP, TAU91; beta p 96.5 0.086 2.9E-06 51.2 16.6 166 97-269 201-389 (524)
319 2uvk_A YJHT; unknown function, 96.4 0.13 4.3E-06 45.9 15.7 114 109-223 60-232 (357)
320 3ott_A Two-component system se 96.4 0.32 1.1E-05 48.2 20.0 152 104-268 62-222 (758)
321 2bkl_A Prolyl endopeptidase; m 96.2 0.18 6.3E-06 49.4 17.3 153 108-266 171-351 (695)
322 4gq1_A NUP37; propeller, trans 96.2 0.13 4.4E-06 46.6 14.8 152 113-268 98-288 (393)
323 2zwa_A Leucine carboxyl methyl 95.9 0.083 2.9E-06 53.0 13.4 156 109-268 391-579 (695)
324 3s9j_A Member of DUF4221 famil 95.9 0.063 2.1E-06 50.8 11.7 110 160-270 40-178 (369)
325 2zwa_A Leucine carboxyl methyl 95.9 0.18 6E-06 50.7 15.4 157 108-269 443-638 (695)
326 3ott_A Two-component system se 95.8 0.18 6.1E-06 50.1 15.0 155 103-269 20-177 (758)
327 3sbq_A Nitrous-oxide reductase 95.6 0.092 3.1E-06 53.1 11.7 132 128-266 217-408 (638)
328 3s9j_A Member of DUF4221 famil 95.3 0.8 2.8E-05 43.2 16.8 148 114-266 36-228 (369)
329 2xe4_A Oligopeptidase B; hydro 95.2 0.2 6.7E-06 50.5 13.0 162 105-270 271-462 (751)
330 1xip_A Nucleoporin NUP159; bet 95.0 1.2 4.2E-05 42.0 17.1 142 107-268 40-193 (388)
331 3bg1_A Protein SEC13 homolog; 95.0 0.22 7.5E-06 43.5 11.1 97 117-218 180-292 (316)
332 4a5s_A Dipeptidyl peptidase 4 94.9 0.068 2.3E-06 53.0 8.6 110 108-223 20-145 (740)
333 2xe4_A Oligopeptidase B; hydro 94.6 0.13 4.4E-06 51.8 9.7 152 108-266 177-354 (751)
334 1k3i_A Galactose oxidase precu 94.6 0.45 1.5E-05 46.7 13.4 125 94-224 179-328 (656)
335 2wg3_C Hedgehog-interacting pr 94.3 0.85 2.9E-05 43.9 14.4 45 93-137 126-186 (463)
336 2be1_A Serine/threonine-protei 91.8 0.18 6.1E-06 47.1 5.2 111 116-229 11-140 (339)
337 2be1_A Serine/threonine-protei 91.7 0.73 2.5E-05 42.9 9.2 109 159-270 10-134 (339)
338 3sbq_A Nitrous-oxide reductase 88.9 0.23 7.7E-06 50.3 3.3 101 129-230 299-429 (638)
339 1xip_A Nucleoporin NUP159; bet 88.8 13 0.00046 34.8 15.4 116 98-228 84-202 (388)
340 3hx6_A Type 4 fimbrial biogene 81.6 19 0.00064 36.1 13.0 96 170-267 164-285 (570)
341 4hvt_A Ritya.17583.B, post-pro 80.5 15 0.00051 37.2 12.2 151 108-266 132-329 (711)
342 3zwu_A Alkaline phosphatase PH 79.2 11 0.00038 37.7 10.5 59 190-252 477-549 (592)
343 2wg3_C Hedgehog-interacting pr 79.2 5.3 0.00018 38.4 8.0 95 109-209 18-158 (463)
344 4a9v_A PHOX; hydrolase, beta-p 72.7 16 0.00054 36.7 9.6 65 105-169 476-552 (592)
345 1tl2_A L10, protein (tachylect 69.6 25 0.00085 31.4 9.2 67 105-179 42-116 (236)
346 4hvt_A Ritya.17583.B, post-pro 49.8 1.9E+02 0.0065 29.1 12.8 110 109-218 293-429 (711)
347 3kvc_A Retinoid isomerohydrola 49.1 39 0.0013 33.0 7.4 14 128-141 445-458 (533)
348 2zux_A YESW protein; beta-prop 49.0 2.2E+02 0.0075 28.6 13.1 103 126-229 149-311 (591)
349 4a9v_A PHOX; hydrolase, beta-p 48.3 40 0.0014 33.9 7.4 57 151-207 477-549 (592)
350 3elq_A Arylsulfate sulfotransf 43.5 2.6E+02 0.0088 27.8 16.0 101 160-270 226-388 (571)
351 1bpo_A Protein (clathrin); cla 38.2 3E+02 0.01 27.0 14.0 61 128-189 226-299 (494)
352 2rqw_B 24-meric peptide from s 38.1 17 0.00058 21.7 1.7 12 19-30 11-22 (26)
353 3elq_A Arylsulfate sulfotransf 37.7 1.1E+02 0.0037 30.5 8.6 91 172-270 177-296 (571)
354 3npe_A 9-CIS-epoxycarotenoid d 36.1 77 0.0026 31.0 7.2 22 208-229 486-507 (529)
355 2xzh_A Clathrin heavy chain 1; 35.5 2.9E+02 0.0099 26.1 13.5 73 109-189 30-106 (365)
356 3zwu_A Alkaline phosphatase PH 34.0 1.4E+02 0.0049 29.6 8.9 59 106-164 477-547 (592)
357 3ei3_A DNA damage-binding prot 33.7 4.6E+02 0.016 27.9 16.4 93 127-221 806-915 (1158)
358 1bpo_A Protein (clathrin); cla 32.7 3.7E+02 0.012 26.4 13.9 99 109-217 29-132 (494)
359 2zux_A YESW protein; beta-prop 28.7 4.1E+02 0.014 26.6 11.1 21 127-147 228-248 (591)
360 1iz6_A Initiation factor 5A; S 28.0 2.3E+02 0.0079 22.6 7.9 83 98-183 4-97 (138)
361 2biw_A Apocarotenoid-cleaving 26.3 1E+02 0.0036 29.6 6.2 22 127-149 400-421 (490)
362 3d8d_A Amyloid beta A4 precurs 23.2 2.6E+02 0.009 23.0 7.2 47 164-210 58-109 (148)
363 1bkb_A Translation initiation 21.8 2.6E+02 0.009 22.1 6.9 83 98-183 6-99 (136)
364 3hks_A EIF-5A-2, eukaryotic tr 21.5 2.9E+02 0.0099 23.0 7.3 83 97-182 25-119 (167)
365 2kxc_B ESPF-like protein; IRTK 21.3 58 0.002 22.2 2.3 19 16-34 27-45 (48)
366 3d8d_A Amyloid beta A4 precurs 21.3 76 0.0026 26.3 3.5 34 191-229 48-83 (148)
367 3npe_A 9-CIS-epoxycarotenoid d 21.1 1.4E+02 0.0049 29.0 6.1 57 213-270 378-443 (529)
368 2xzh_A Clathrin heavy chain 1; 20.7 5.3E+02 0.018 24.2 11.6 84 90-177 243-330 (365)
369 1yby_A Translation elongation 20.6 4.2E+02 0.014 22.9 10.2 131 126-268 63-210 (215)
No 1
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=100.00 E-value=3e-57 Score=411.11 Aligned_cols=186 Identities=37% Similarity=0.661 Sum_probs=178.9
Q ss_pred CCCceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEE
Q 023864 86 QSPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQV 165 (276)
Q Consensus 86 ~~~~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~Lyql 165 (276)
.+++.++++||++||||+.+|||||+|++ ++||||||+||+|+|+++|++||+++++++++.++||||+++++++|||+
T Consensus 2 ~~~~~~~~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~l 80 (243)
T 3mbr_X 2 DPVPTQGYRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQL 80 (243)
T ss_dssp -CCCBCCEEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred CCCcccceEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEE
Confidence 36788999999999999999999999995 89999999999999999999999999999999999999999999999999
Q ss_pred EeeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEEC
Q 023864 166 TWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK 245 (276)
Q Consensus 166 Twk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~id 245 (276)
||+++++++||++|++++++|+++ +||||||+||++||||||+++|+++||+|++++++|.|+++|.|+.++|||||++
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~ 159 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN 159 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EeeCCEEEEEECCcCcEEEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC
Confidence 999999999999999999999998 7999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEEEEEEe
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGSSLVYVT 275 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v~l~~~~ 275 (276)
|+||||+|++ |+|++|||+||+|+ +.|.
T Consensus 160 G~lyanvw~s-~~I~vIDp~tG~V~-~~id 187 (243)
T 3mbr_X 160 GELLANVWLT-SRIARIDPASGKVV-AWID 187 (243)
T ss_dssp TEEEEEETTT-TEEEEECTTTCBEE-EEEE
T ss_pred CEEEEEECCC-CeEEEEECCCCCEE-EEEE
Confidence 9999999999 99999999997655 6653
No 2
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=100.00 E-value=1e-55 Score=405.09 Aligned_cols=187 Identities=37% Similarity=0.691 Sum_probs=179.1
Q ss_pred CCCCceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEE
Q 023864 85 DQSPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQ 164 (276)
Q Consensus 85 ~~~~~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~Lyq 164 (276)
..+++.++++|+++||||+.+|||||+|+ |++||||||+||+|+|+++|++||++++++++++++||||+++++++|||
T Consensus 23 ~~~~~~~~~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ 101 (262)
T 3nol_A 23 TPSIPIYDYQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVG 101 (262)
T ss_dssp --CCCEEEEEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEE
T ss_pred CCCCcccceEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEE
Confidence 45678899999999999999999999999 68999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE
Q 023864 165 VTWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 165 lTwk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i 244 (276)
+||+++++++||++|++++++|+++ +||||||+||++||||||+++|+++||+|++++++|.|+.+|+|+.++|||||+
T Consensus 102 ltw~~~~v~v~D~~t~~~~~ti~~~-~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRSFNYD-GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECS-SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEeeCCEEEEEECccCcEEEEEECC-CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 9999999999999999999999998 799999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcEEEEEEe
Q 023864 245 KGEVWANVWQVWPCIPYAYLQAFGSSLVYVT 275 (276)
Q Consensus 245 dG~lyANvw~s~d~I~vIDp~T~~v~l~~~~ 275 (276)
||+||||+|++ |+|++|||+||+|+ +.|.
T Consensus 181 ~G~lyan~w~~-~~I~vIDp~tG~V~-~~Id 209 (262)
T 3nol_A 181 DGEIFANVWQT-NKIVRIDPETGKVT-GIID 209 (262)
T ss_dssp TTEEEEEETTS-SEEEEECTTTCBEE-EEEE
T ss_pred CCEEEEEEccC-CeEEEEECCCCcEE-EEEE
Confidence 99999999999 99999999997654 6653
No 3
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=100.00 E-value=2.9e-52 Score=383.42 Aligned_cols=182 Identities=29% Similarity=0.494 Sum_probs=173.0
Q ss_pred CCceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEE
Q 023864 87 SPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVT 166 (276)
Q Consensus 87 ~~~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlT 166 (276)
+|-.-..+|+++||||+.+|||||+|+ +++||||+|+||+ |+++|++||++++++ +++++||||+++++++|||+|
T Consensus 37 ~~~~~~~~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~--v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 37 EPVRRVAHIIREYPHATNAFTQGLVFH-QGHFFESTGHQGT--LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLT 112 (268)
T ss_dssp CCEEEEEEEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTE--EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEE
T ss_pred CccccceEEEEEEcCCCccccceEEEE-CCEEEEEcCCCCE--EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEE
Confidence 344567799999999999999999998 4899999999888 999999999999999 999999999999999999999
Q ss_pred eeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECC
Q 023864 167 WLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKG 246 (276)
Q Consensus 167 wk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG 246 (276)
|+++++++||++|++++++|+++ +||||||+||++||+|||+++|+++||+|++++++|.|+.+|+++.++|||||+||
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG 191 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANG 191 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred ccCCEEEEEECCcCcEEEEEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCC
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcEEEEEEe
Q 023864 247 EVWANVWQVWPCIPYAYLQAFGSSLVYVT 275 (276)
Q Consensus 247 ~lyANvw~s~d~I~vIDp~T~~v~l~~~~ 275 (276)
+||||+|++ |+|++|||+||+|+ +.|.
T Consensus 192 ~lyanvw~s-~~I~vIDp~TG~V~-~~Id 218 (268)
T 3nok_A 192 VIYANIWHS-SDVLEIDPATGTVV-GVID 218 (268)
T ss_dssp EEEEEETTC-SEEEEECTTTCBEE-EEEE
T ss_pred EEEEEECCC-CeEEEEeCCCCcEE-EEEE
Confidence 999999999 99999999996654 6654
No 4
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=100.00 E-value=2.2e-49 Score=362.76 Aligned_cols=188 Identities=64% Similarity=1.128 Sum_probs=180.6
Q ss_pred CCCceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEE
Q 023864 86 QSPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQV 165 (276)
Q Consensus 86 ~~~~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~Lyql 165 (276)
++++.++++|+++|||++.+|||||+|++||+||||+|+|++++|+++|++||+++++++++.++||||+++++++||++
T Consensus 2 ~~~~~~~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~ 81 (266)
T 2iwa_A 2 PSSRVYIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQV 81 (266)
T ss_dssp CCCCEEEEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred CCCCccCceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEE
Confidence 46788999999999999999999999999899999999999999999999999999999999999999999999999999
Q ss_pred EeeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEEC
Q 023864 166 TWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK 245 (276)
Q Consensus 166 Twk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~id 245 (276)
||+++++++||++|++++++|+++++|||||++||++||+|||+++|++|||+|++++++|.|+.+|+|+.++|||||+|
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~d 161 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYIN 161 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEEC
Confidence 99999999999999999999998667999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEEEEEEe
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGSSLVYVT 275 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v~l~~~~ 275 (276)
|+||||+|.+ |.|++|||+|+++ ++.|.
T Consensus 162 g~lyvn~~~~-~~V~vID~~tg~V-~~~I~ 189 (266)
T 2iwa_A 162 GEVWANIWQT-DCIARISAKDGTL-LGWIL 189 (266)
T ss_dssp TEEEEEETTS-SEEEEEETTTCCE-EEEEE
T ss_pred CEEEEecCCC-CeEEEEECCCCcE-EEEEE
Confidence 9999999999 9999999999776 47764
No 5
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=4.7e-18 Score=154.00 Aligned_cols=154 Identities=12% Similarity=0.050 Sum_probs=124.0
Q ss_pred EEEEcCCCC--CCeEEEEeCCCCcEEEEeec-----CCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEEEEEecC-
Q 023864 118 LFESTGLYG--RSSVRRVALETGKVEAINQM-----EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ- 189 (276)
Q Consensus 118 LyeStG~yg--~S~I~~iDl~tgkv~~~~~l-----~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~- 189 (276)
+....|.+| .+.|.+||++|+++.+.+.. +-..+++++++++++||++++.++.+.++|++|++++++++..
T Consensus 5 ~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~ 84 (328)
T 3dsm_A 5 FITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT 84 (328)
T ss_dssp EEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS
T ss_pred EEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC
Confidence 334456555 68999999999999776521 2345789999999999999999999999999999999999753
Q ss_pred CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCC-CCCeEEEEeCCCC
Q 023864 190 MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQ-VWPCIPYAYLQAF 267 (276)
Q Consensus 190 ~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~-s~d~I~vIDp~T~ 267 (276)
.+++..+++|| .||++| .++.|+++|++|+++++++.++........++.|.+.+|+||++.|. + +.|.+||++|+
T Consensus 85 ~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~-~~v~viD~~t~ 162 (328)
T 3dsm_A 85 SPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQ-NRILKIDTETD 162 (328)
T ss_dssp SEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTC-CEEEEEETTTT
T ss_pred CCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCC-CEEEEEECCCC
Confidence 33444455676 899999 79999999999999999999975333334667788889999999994 8 99999999996
Q ss_pred cEEEEEE
Q 023864 268 GSSLVYV 274 (276)
Q Consensus 268 ~v~l~~~ 274 (276)
+++ ..+
T Consensus 163 ~~~-~~i 168 (328)
T 3dsm_A 163 KVV-DEL 168 (328)
T ss_dssp EEE-EEE
T ss_pred eEE-EEE
Confidence 543 444
No 6
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=3.4e-17 Score=148.39 Aligned_cols=166 Identities=13% Similarity=0.096 Sum_probs=135.9
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCc----eEEEEEEeCCEEEEEEe
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----FGEGLTLLGEKLFQVTW 167 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~----FgEGit~~g~~LyqlTw 167 (276)
+.+++.+++.. ....++++++||+||+++. ..+.|.+||++++++..+++++... .++|+++.+++||+.+|
T Consensus 73 t~~~~~~i~~~--~~p~~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~ 148 (328)
T 3dsm_A 73 TFKEVGRITGF--TSPRYIHFLSDEKAYVTQI--WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW 148 (328)
T ss_dssp TCCEEEEEECC--SSEEEEEEEETTEEEEEEB--SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC
T ss_pred ccEEEEEcCCC--CCCcEEEEeCCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC
Confidence 56788888763 4556999988899999875 4789999999999999998888722 56788889999999999
Q ss_pred -eCCEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEECCC----------ceEEEEcCCCCcEEEEEEeeeCCEee
Q 023864 168 -LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGS----------SMLYQIDPQTLKVIRKDIVRYKGREV 235 (276)
Q Consensus 168 -k~~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS----------~~L~viDp~t~~vi~~I~V~~~g~pv 235 (276)
.++.+.+||+++.+++++++.+ .+.+..+++||+.++++.|. +.|+++|++|+++++++.+..+
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g---- 224 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG---- 224 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT----
T ss_pred CCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC----
Confidence 5999999999999999999875 46777788888744444465 7999999999999999887532
Q ss_pred eeeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 236 RNLNELEFI--KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 236 ~~lNELE~i--dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
..++.|.+. +++||+.+- .|.+||++++++
T Consensus 225 ~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~ 256 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN----DIWRMPVEADRV 256 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS----SEEEEETTCSSC
T ss_pred CCceeEEEecCCCEEEEEcc----EEEEEECCCCce
Confidence 156778887 457998763 699999999775
No 7
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.75 E-value=8.7e-17 Score=146.88 Aligned_cols=171 Identities=13% Similarity=0.044 Sum_probs=142.1
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
.+-++++++|.+...|-+|+.+++ ++||.++- .++.+.+||++|++++.+++.+ .+-|-|++.++++||+.+ .++
T Consensus 52 ~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~--~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~ 126 (266)
T 2iwa_A 52 QTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVW--LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTS 126 (266)
T ss_dssp TTCCEEEEEECCTTCCEEEEEEET-TEEEEEET--TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSS
T ss_pred CCCCEEEEEecCCCcceEEEEEeC-CEEEEEEe--cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCC
Confidence 367899999998999999999984 79999875 8999999999999999999988 444678999999999988 699
Q ss_pred EEEEEeCCCCcEEEEEecC-CC----CeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeee-------CCE-eee
Q 023864 171 TGFIYDQNNLNKLEEFTHQ-MK----DGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY-------KGR-EVR 236 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~-~~----EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~-------~g~-pv~ 236 (276)
++.++|++|++++++++.+ .+ .-++|...+..||+++ .++.|.+|||+|++++++|.+.. .+. +..
T Consensus 127 ~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~ 206 (266)
T 2iwa_A 127 ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDID 206 (266)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCC
T ss_pred eEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccC
Confidence 9999999999999999864 11 2345554455899998 69999999999999999999951 111 234
Q ss_pred eeeeeEEEC--CEEEEEeCCCCCeEEEEeCCCC
Q 023864 237 NLNELEFIK--GEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 237 ~lNELE~id--G~lyANvw~s~d~I~vIDp~T~ 267 (276)
.+|-+++.. +++|+.+-.. ++|.+||..+.
T Consensus 207 v~nGIa~~~~~~~lfVTgk~~-~~v~~i~l~~~ 238 (266)
T 2iwa_A 207 VLNGIAWDQENKRIFVTGKLW-PKLFEIKLHLV 238 (266)
T ss_dssp CEEEEEEETTTTEEEEEETTC-SEEEEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEECCCC-CeEEEEEEecc
Confidence 789999983 4899999766 99999998763
No 8
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.75 E-value=3.6e-17 Score=158.00 Aligned_cols=173 Identities=10% Similarity=-0.033 Sum_probs=136.9
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCC-------CCCeEEEEeCCCCcEEEEeecC--------CCceEEE
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLY-------GRSSVRRVALETGKVEAINQME--------GSYFGEG 154 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~y-------g~S~I~~iDl~tgkv~~~~~l~--------~~~FgEG 154 (276)
.+.+++.++|... .. |+.+++||+ ||++.-.+ +.+.|.+||++|++++++++++ ..+.+..
T Consensus 107 ~t~~vv~~I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 107 STGRILGMTDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp TTTEEEEEEEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSE
T ss_pred CCCEEEEEEECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEE
Confidence 4678999999854 44 999999975 99875211 3578999999999999999986 2344444
Q ss_pred EEEeCCEEEEEEee-CCEEEEEeCCCCcEEEEEecCC-------------------------------------------
Q 023864 155 LTLLGEKLFQVTWL-QKTGFIYDQNNLNKLEEFTHQM------------------------------------------- 190 (276)
Q Consensus 155 it~~g~~LyqlTwk-~~~v~V~D~~tlk~i~~~~~~~------------------------------------------- 190 (276)
++.++++||+.++. ++.+.|||.++++++++++.+.
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 44467899999986 8999999999999998887520
Q ss_pred ------------------------------------------------------CCe---eEEeeCCCEEEEEC------
Q 023864 191 ------------------------------------------------------KDG---WGLATDGKVLFGSD------ 207 (276)
Q Consensus 191 ------------------------------------------------------~EG---WGLT~Dg~~L~vSD------ 207 (276)
+.| .++++||++||+++
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 011 35677889999986
Q ss_pred ----CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-C-C-EEEEEeCCCCCeEEEEeCCCCcEEEEEE
Q 023864 208 ----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K-G-EVWANVWQVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 208 ----GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-d-G-~lyANvw~s~d~I~vIDp~T~~v~l~~~ 274 (276)
+++.|.+||++|++++++|.|+. .++.+++. | . ++|+.+|.+ +.|+|||++|++++ +.|
T Consensus 344 thk~~s~~VsVID~~T~kvv~~I~vg~------~P~gia~spDg~~~lyv~n~~s-~~VsVID~~t~kvv-~tI 409 (426)
T 3c75_H 344 KHKAASRFVVVLNAETGERINKIELGH------EIDSINVSQDAEPLLYALSAGT-QTLHIYDAATGEEL-RSV 409 (426)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEE------EECEEEECCSSSCEEEEEETTT-TEEEEEETTTCCEE-EEE
T ss_pred cccCCCCEEEEEECCCCeEEEEEECCC------CcCeEEEccCCCEEEEEEcCCC-CeEEEEECCCCCEE-EEe
Confidence 35789999999999999999985 45566666 3 3 699999999 99999999997765 664
No 9
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.69 E-value=2.1e-15 Score=141.21 Aligned_cols=170 Identities=5% Similarity=-0.081 Sum_probs=129.6
Q ss_pred eeEEEEEEecCCCCCceEEEEecCC-EEEEEcCC-------CCCCeEEEEeCCCCcEEEEeecC-C-----CceEEEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-------YGRSSVRRVALETGKVEAINQME-G-----SYFGEGLTL 157 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg-~LyeStG~-------yg~S~I~~iDl~tgkv~~~~~l~-~-----~~FgEGit~ 157 (276)
+.+++.++|.+.. . |+.++||| +||++.-. ...+.|.+||+++++++.+++++ . ..++.++++
T Consensus 56 t~~~~~~i~~g~~--p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~ 132 (373)
T 2mad_H 56 SGSILGHVNGGFL--P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN 132 (373)
T ss_pred CCeEEEEecCCCC--C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE
Confidence 5678899987533 3 99999997 59987532 13578999999999999999887 1 123445555
Q ss_pred --eCCEEEEEEee-CCEEEEEeCCCCcEEEE-EecCC-------------------------------------------
Q 023864 158 --LGEKLFQVTWL-QKTGFIYDQNNLNKLEE-FTHQM------------------------------------------- 190 (276)
Q Consensus 158 --~g~~LyqlTwk-~~~v~V~D~~tlk~i~~-~~~~~------------------------------------------- 190 (276)
++++||+.+.. ++.+.+|| ++.+++++ ++.+.
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~ 211 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAA 211 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCC
Confidence 67899999986 79999999 99998888 53210
Q ss_pred ------------------------------------------------------CCe---eEEeeCCCEEEEEC------
Q 023864 191 ------------------------------------------------------KDG---WGLATDGKVLFGSD------ 207 (276)
Q Consensus 191 ------------------------------------------------------~EG---WGLT~Dg~~L~vSD------ 207 (276)
+.| .++++||++||+++
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~ 291 (373)
T 2mad_H 212 QNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAW 291 (373)
T ss_pred cceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcc
Confidence 122 34677889999963
Q ss_pred ----CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC--EEEEEeCCCCCeEEEEeCCCCcEEEEE
Q 023864 208 ----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG--EVWANVWQVWPCIPYAYLQAFGSSLVY 273 (276)
Q Consensus 208 ----GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG--~lyANvw~s~d~I~vIDp~T~~v~l~~ 273 (276)
+++.|++||++|++++++|.++. .+.-|++. || .+|+.+|.+ +.|++||++|++++ +.
T Consensus 292 ~~~~~~~~V~VID~~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~~~~-~~V~ViD~~t~~vv-~~ 356 (373)
T 2mad_H 292 KLHAAAKEVTSVTGLVGQTSSQISLGH------DVDAISVAQDGGPDLYALSAGT-EVLHIYDAGAGDQD-QS 356 (373)
T ss_pred cccCCCCeEEEEECCCCEEEEEEECCC------CcCeEEECCCCCeEEEEEcCCC-CeEEEEECCCCCEE-ee
Confidence 35789999999999999999875 33445555 44 489999999 99999999997765 54
No 10
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=1.8e-14 Score=126.31 Aligned_cols=173 Identities=14% Similarity=0.170 Sum_probs=139.9
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCc--------eEEEEEEe--CC
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSY--------FGEGLTLL--GE 160 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~--------FgEGit~~--g~ 160 (276)
+.+++.++++... ..++.+++||+ ||.+.. +.+.|.+||+++++++..++++... ...++++. ++
T Consensus 78 ~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 153 (353)
T 3vgz_A 78 TLEVTQAIHNDLK--PFGATINNTTQTLWFGNT--VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN 153 (353)
T ss_dssp TCCEEEEEEESSC--CCSEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT
T ss_pred CCeEEEEEecCCC--cceEEECCCCCEEEEEec--CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC
Confidence 4567778877544 45999999975 888766 6789999999999999998886422 25677775 57
Q ss_pred EEEEEEee-CCEEEEEeCCCCcEEEEEe-cC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeee
Q 023864 161 KLFQVTWL-QKTGFIYDQNNLNKLEEFT-HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (276)
Q Consensus 161 ~LyqlTwk-~~~v~V~D~~tlk~i~~~~-~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~ 237 (276)
++|+..+. ++.++++|.++.+.+.+++ .+ .+.+..+++||+.||+++..+.|+++|+++++++..+.+...+. -..
T Consensus 154 ~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~ 232 (353)
T 3vgz_A 154 TVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGK-EHF 232 (353)
T ss_dssp EEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSS-CCC
T ss_pred EEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC-Ccc
Confidence 89999974 7889999999999999998 33 36788899999999999999999999999999999988855432 235
Q ss_pred eeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 238 LNELEFI--KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 238 lNELE~i--dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
++.+.+. +++||+..... +.|.++|+++++.+
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~-~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKA-AEVLVVDTRNGNIL 266 (353)
T ss_dssp EEEEEEETTTTEEEEEESSS-SEEEEEETTTCCEE
T ss_pred cceEEECCCCCEEEEEeCCC-CEEEEEECCCCcEE
Confidence 6667776 34799999888 99999999997754
No 11
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.64 E-value=1.5e-14 Score=132.45 Aligned_cols=166 Identities=16% Similarity=0.112 Sum_probs=136.6
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
.+-+++++++.++..|-+|+.+.+ ++||..+. .++.+.+||++|++++.+++.+. -|-|++.++++||+.+ .++
T Consensus 73 ~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw--~~~~v~v~D~~t~~~~~ti~~~~--eG~glt~dg~~L~~Sd-Gs~ 146 (262)
T 3nol_A 73 ESGKTLQQIELGKRYFGEGISDWK-DKIVGLTW--KNGLGFVWNIRNLRQVRSFNYDG--EGWGLTHNDQYLIMSD-GTP 146 (262)
T ss_dssp TTCCEEEEEECCTTCCEEEEEEET-TEEEEEES--SSSEEEEEETTTCCEEEEEECSS--CCCCEEECSSCEEECC-SSS
T ss_pred CCCcEEEEEecCCccceeEEEEeC-CEEEEEEe--eCCEEEEEECccCcEEEEEECCC--CceEEecCCCEEEEEC-CCC
Confidence 366899999999999999999984 79999876 78999999999999999999876 4668999999999998 489
Q ss_pred EEEEEeCCCCcEEEEEecC-CCCee----EEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeee-------CCEeeee
Q 023864 171 TGFIYDQNNLNKLEEFTHQ-MKDGW----GLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY-------KGREVRN 237 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~-~~EGW----GLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~-------~g~pv~~ 237 (276)
++.++|++|++++++++.. .++.. .|...+..||+.+ .++.|.+|||+|++++++|.+.. ...+...
T Consensus 147 ~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~v 226 (262)
T 3nol_A 147 VLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDV 226 (262)
T ss_dssp EEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCC
T ss_pred eEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCc
Confidence 9999999999999999864 12221 2555456899988 79999999999999999999952 0112347
Q ss_pred eeeeEEEC--CEEEEEeCCCCCeEEEEe
Q 023864 238 LNELEFIK--GEVWANVWQVWPCIPYAY 263 (276)
Q Consensus 238 lNELE~id--G~lyANvw~s~d~I~vID 263 (276)
+|-+.|.. +++|+.. ..|+.+..|-
T Consensus 227 lNGIA~dp~~~~lfVTG-K~Wp~~~ev~ 253 (262)
T 3nol_A 227 LNGIAWDKEHHRLFVTG-KLWPKVFEIT 253 (262)
T ss_dssp EEEEEEETTTTEEEEEE-TTCSEEEEEE
T ss_pred eEEEEEcCCCCEEEEEC-CCCCceEEEE
Confidence 89999984 5899987 4558887664
No 12
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.63 E-value=2.8e-14 Score=129.19 Aligned_cols=167 Identities=19% Similarity=0.121 Sum_probs=138.1
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
.+-+++++++.+...|-+|+.+.+ ++||..+. .++.+.+||++|++++.+++.+.. |-|++.++++||+.+ .++
T Consensus 51 ~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw--~~~~v~v~D~~tl~~~~ti~~~~~--Gwglt~dg~~L~vSd-gs~ 124 (243)
T 3mbr_X 51 ETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTW--RNHEGFVYDLATLTPRARFRYPGE--GWALTSDDSHLYMSD-GTA 124 (243)
T ss_dssp TTCCEEEEEECCTTCCEEEEEEET-TEEEEEES--SSSEEEEEETTTTEEEEEEECSSC--CCEEEECSSCEEEEC-SSS
T ss_pred CCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEe--eCCEEEEEECCcCcEEEEEeCCCC--ceEEeeCCCEEEEEC-CCC
Confidence 366899999999999999999984 89999876 889999999999999999998875 568898899999998 599
Q ss_pred EEEEEeCCCCcEEEEEecC-CCCee----EEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeee---C-----CEeee
Q 023864 171 TGFIYDQNNLNKLEEFTHQ-MKDGW----GLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY---K-----GREVR 236 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~-~~EGW----GLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~---~-----g~pv~ 236 (276)
++.++|++|++++++++.. .+++. .|.+.+..||+.+ .++.|.+|||+|++++++|.+.. + .....
T Consensus 125 ~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 125 VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSS
T ss_pred eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCC
Confidence 9999999999999999864 22332 2555677899988 79999999999999999999873 1 11334
Q ss_pred eeeeeEEEC--CEEEEEeCCCCCeEEEEeC
Q 023864 237 NLNELEFIK--GEVWANVWQVWPCIPYAYL 264 (276)
Q Consensus 237 ~lNELE~id--G~lyANvw~s~d~I~vIDp 264 (276)
.+|-+.|+. +++|+.- .-|+.+..|-.
T Consensus 205 vlNGIA~d~~~~~lfVTG-K~wp~~~~v~~ 233 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTG-KRWPMLYEIRL 233 (243)
T ss_dssp CEEEEEEETTTTEEEEEE-TTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEEC-CCCCcEEEEEE
Confidence 789999984 6899886 44588877653
No 13
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.63 E-value=4.3e-15 Score=140.57 Aligned_cols=173 Identities=5% Similarity=-0.194 Sum_probs=127.7
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCC-EEEEEcC-----CC--CCCeEEEEeCCCCcEEEEeecC--------CCceEEE
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAEND-TLFESTG-----LY--GRSSVRRVALETGKVEAINQME--------GSYFGEG 154 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg-~LyeStG-----~y--g~S~I~~iDl~tgkv~~~~~l~--------~~~FgEG 154 (276)
.+.+++.++|....+ |+.+++|| +||++.. .+ ..+.|.+||++|+++++++++| ..+.+..
T Consensus 54 ~t~~v~~~i~vG~~P---~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia 130 (368)
T 1mda_H 54 GCGVTLGHSLGAFLS---LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIG 130 (368)
T ss_dssp TTTEEEEEEEECTTC---EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEE
T ss_pred CCCeEEEEEeCCCCC---ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEE
Confidence 367999999986554 99999997 5998762 11 3588999999999999999987 3455455
Q ss_pred EEEeCCEEEEEEee-CCEEEE--EeCCCCcEEE-----------------------------------------------
Q 023864 155 LTLLGEKLFQVTWL-QKTGFI--YDQNNLNKLE----------------------------------------------- 184 (276)
Q Consensus 155 it~~g~~LyqlTwk-~~~v~V--~D~~tlk~i~----------------------------------------------- 184 (276)
++.+|++||+.++. ++.+.+ +|+++.+.+.
T Consensus 131 ~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i 210 (368)
T 1mda_H 131 NCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ 210 (368)
T ss_dssp ECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTS
T ss_pred EcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeee
Confidence 55567899999987 688888 8885521110
Q ss_pred -------------------------------------EEecC---------CCCe---eEEeeCCCEEEEEC----C---
Q 023864 185 -------------------------------------EFTHQ---------MKDG---WGLATDGKVLFGSD----G--- 208 (276)
Q Consensus 185 -------------------------------------~~~~~---------~~EG---WGLT~Dg~~L~vSD----G--- 208 (276)
+++.. .+.| .++++||++||+++ |
T Consensus 211 ~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 211 NCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp CBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred eCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 00000 0122 45889999999974 4
Q ss_pred --CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeC-CCCCeEEEEeCCCCcEEEEEE
Q 023864 209 --SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVW-QVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 209 --S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw-~s~d~I~vIDp~T~~v~l~~~ 274 (276)
++.+.+||++|++++++|.++. .++.|++. || ++|+.++ .+ |.|+|||++|++++ .+|
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg~------~p~gi~~s~Dg~~l~va~~~~~-~~VsVID~~t~kvv-~~I 353 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNGH------DSDAIIAAQDGASDNYANSAGT-EVLDIYDAASDQDQ-SSV 353 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEEE------EECEEEECCSSSCEEEEEETTT-TEEEEEESSSCEEE-EEC
T ss_pred ccCCCEEEEECCCCeEEEEEECCC------CcceEEECCCCCEEEEEccCCC-CeEEEEECCCCcEE-EEE
Confidence 5788899999999999999986 45666676 55 4665555 79 99999999996554 766
No 14
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=2.1e-14 Score=142.41 Aligned_cols=166 Identities=13% Similarity=0.092 Sum_probs=130.4
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCC--CCcEEEEeecCCCceEEEEEEe------CCEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE--TGKVEAINQMEGSYFGEGLTLL------GEKL 162 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~--tgkv~~~~~l~~~~FgEGit~~------g~~L 162 (276)
+.+++.++|... ...|+.|++||+ ||.+ + .+..|.+||+. +++++.+++.+..+ +++++. |+++
T Consensus 186 t~~v~~~i~~g~--~p~~v~~SpDGr~lyv~-~--~dg~V~viD~~~~t~~~v~~i~~G~~P--~~ia~s~~~~pDGk~l 258 (567)
T 1qks_A 186 TYEIKTVLDTGY--AVHISRLSASGRYLFVI-G--RDGKVNMIDLWMKEPTTVAEIKIGSEA--RSIETSKMEGWEDKYA 258 (567)
T ss_dssp TCCEEEEEECSS--CEEEEEECTTSCEEEEE-E--TTSEEEEEETTSSSCCEEEEEECCSEE--EEEEECCSTTCTTTEE
T ss_pred CCeEEEEEeCCC--CccceEECCCCCEEEEE-c--CCCeEEEEECCCCCCcEeEEEecCCCC--ceeEEccccCCCCCEE
Confidence 357888888743 456999999975 7865 4 46789999996 99999998887764 566665 6799
Q ss_pred EEEEeeCCEEEEEeCCCCcEEEEEecCC---------CC-----------------------------------------
Q 023864 163 FQVTWLQKTGFIYDQNNLNKLEEFTHQM---------KD----------------------------------------- 192 (276)
Q Consensus 163 yqlTwk~~~v~V~D~~tlk~i~~~~~~~---------~E----------------------------------------- 192 (276)
|+.++..+.+.|+|..|++++++++... +|
T Consensus 259 ~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 259 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee
Confidence 9999999999999999999999987430 01
Q ss_pred -------eeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEe-eeCCEeeeeeeeeEEEC-CEEEEE-eCCCCCeEEE
Q 023864 193 -------GWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIV-RYKGREVRNLNELEFIK-GEVWAN-VWQVWPCIPY 261 (276)
Q Consensus 193 -------GWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V-~~~g~pv~~lNELE~id-G~lyAN-vw~s~d~I~v 261 (276)
+-++++||+++|+++ ++++|.+||.+|+++++.+.| +...+|-..+| +.-.+ |.+|+. ...+ +.|++
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~-~~Vsv 416 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGD-DSVAL 416 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSS-SEEEE
T ss_pred eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCC-CeEEE
Confidence 346899999999987 799999999999999999999 65444433445 21223 679964 4567 89999
Q ss_pred EeCCC
Q 023864 262 AYLQA 266 (276)
Q Consensus 262 IDp~T 266 (276)
||+++
T Consensus 417 id~~~ 421 (567)
T 1qks_A 417 IGTDP 421 (567)
T ss_dssp EECCT
T ss_pred ecCCC
Confidence 99998
No 15
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.62 E-value=2.1e-14 Score=131.91 Aligned_cols=165 Identities=17% Similarity=0.130 Sum_probs=134.7
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
.+-++++++ .++..|-+|+.+.+ ++||..+. .++.+.+||++|++++++++.+.. |-|++.++++||+.+ .++
T Consensus 83 ~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw--~~~~v~V~D~~Tl~~~~ti~~~~e--GwGLt~Dg~~L~vSd-Gs~ 155 (268)
T 3nok_A 83 ESAQPVWME-RLGNIFAEGLASDG-ERLYQLTW--TEGLLFTWSGMPPQRERTTRYSGE--GWGLCYWNGKLVRSD-GGT 155 (268)
T ss_dssp SCSSCSEEE-ECTTCCEEEEEECS-SCEEEEES--SSCEEEEEETTTTEEEEEEECSSC--CCCEEEETTEEEEEC-SSS
T ss_pred CCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEc--cCCEEEEEECCcCcEEEEEeCCCc--eeEEecCCCEEEEEC-CCC
Confidence 466788888 78899999999985 79999876 789999999999999999998765 669999999999998 699
Q ss_pred EEEEEeCCCCcEEEEEecC-CCCee----EEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeee--------CCEeee
Q 023864 171 TGFIYDQNNLNKLEEFTHQ-MKDGW----GLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY--------KGREVR 236 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~-~~EGW----GLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~--------~g~pv~ 236 (276)
++.++|++|++++++++.. .++.. .|...+..||+++ .++.|.+|||+|++++++|.+.. ...+..
T Consensus 156 ~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 156 MLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred EEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 9999999999999999874 22332 2344344899988 79999999999999999999962 111335
Q ss_pred eeeeeEEEC--CEEEEEeCCCCCeEEEEe
Q 023864 237 NLNELEFIK--GEVWANVWQVWPCIPYAY 263 (276)
Q Consensus 237 ~lNELE~id--G~lyANvw~s~d~I~vID 263 (276)
.+|-+.|.. +++|+.- .-|+.+..|-
T Consensus 236 vlNGIA~dp~~~rlfVTG-K~Wp~~~ev~ 263 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTG-KLWPRLFEVR 263 (268)
T ss_dssp CEEEEEECTTTCCEEEEE-TTCSEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeC-CCCCceEEEE
Confidence 789999994 5799876 4458787764
No 16
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.59 E-value=1.9e-14 Score=138.99 Aligned_cols=146 Identities=9% Similarity=-0.095 Sum_probs=117.3
Q ss_pred CEEEEEcCCCCC--CeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe---------eCCEEEEEeCCCCcEEE
Q 023864 116 DTLFESTGLYGR--SSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 116 g~LyeStG~yg~--S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw---------k~~~v~V~D~~tlk~i~ 184 (276)
.++|++....+. +.|.+||++|++++.+++++..+ +..++.++++||+.++ .++.+.+||+.|+++++
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 579988763322 79999999999999999999887 6555556789999997 57899999999999999
Q ss_pred EEecC---------CCCeeEEeeCCCEEEEEC-C-CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeC
Q 023864 185 EFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW 253 (276)
Q Consensus 185 ~~~~~---------~~EGWGLT~Dg~~L~vSD-G-S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw 253 (276)
+++.+ .++|..+++||++||++| + ++.|.+||+++++++++|.|.. .. . +...+.+.|+.++
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~~--~---~~p~g~~~~v~~~ 236 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--CY--H---IFPASPTVFYMNC 236 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EE--E---EEEEETTEEEEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--ce--e---eccCCCcEEEEEc
Confidence 99864 467889999999999998 4 7899999999999999999953 21 1 1122345777777
Q ss_pred CCCCeEEEEeCCCCcEE
Q 023864 254 QVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 254 ~s~d~I~vIDp~T~~v~ 270 (276)
.+ +.+++||..++++.
T Consensus 237 ~d-G~~~~V~~~~~~v~ 252 (426)
T 3c75_H 237 RD-GSLARVDFADGETK 252 (426)
T ss_dssp TT-SSEEEEECCTTCCE
T ss_pred CC-CCEEEEECCCCcEE
Confidence 77 88888888665544
No 17
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.57 E-value=2.4e-13 Score=130.11 Aligned_cols=94 Identities=12% Similarity=-0.005 Sum_probs=76.9
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCE-EEEEcCC-----CC--CCeEEEEeCCCCcEEEEeecCC--------CceEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGL-----YG--RSSVRRVALETGKVEAINQMEG--------SYFGEGL 155 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~-----yg--~S~I~~iDl~tgkv~~~~~l~~--------~~FgEGi 155 (276)
+.+++.++|....+ ++.++|||+ ||++... .| .+.|++||++|++++.+++++. .+++-.+
T Consensus 68 t~~v~~~I~vG~~P---~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 68 AGRVIGMIDGGFLP---NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 144 (386)
T ss_dssp TTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE
T ss_pred CCeEEEEEECCCCC---cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE
Confidence 67899999986554 599999975 9987521 22 5789999999999999998874 5776666
Q ss_pred EEeCCEEEEEEee-CCEEEEEeCCCCcEEEEEec
Q 023864 156 TLLGEKLFQVTWL-QKTGFIYDQNNLNKLEEFTH 188 (276)
Q Consensus 156 t~~g~~LyqlTwk-~~~v~V~D~~tlk~i~~~~~ 188 (276)
+.+|.+||+.+.. ++.+.|+|.++++++++++.
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 6678999999975 89999999999999888864
No 18
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.56 E-value=8.5e-13 Score=115.69 Aligned_cols=172 Identities=15% Similarity=0.056 Sum_probs=128.6
Q ss_pred eeEEEEEEecCCCC--------CceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEee-cCCCceEEEEEEeCCE
Q 023864 92 TIQVVNEFPHDPRA--------FTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQ-MEGSYFGEGLTLLGEK 161 (276)
Q Consensus 92 t~~Vv~~~Phd~~a--------FTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~-l~~~~FgEGit~~g~~ 161 (276)
+-+++.+++..... ...++.|++|| +||.+.. .....|.+||+++++++...+ .+..+.+..+..+++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKR 198 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCE
Confidence 34567777763222 25789999986 5887652 256789999999999988877 4444443333335678
Q ss_pred EEEEEeeCCEEEEEeCCCCcEEEEEecCC------CCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEe
Q 023864 162 LFQVTWLQKTGFIYDQNNLNKLEEFTHQM------KDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGRE 234 (276)
Q Consensus 162 LyqlTwk~~~v~V~D~~tlk~i~~~~~~~------~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~p 234 (276)
||+.+. ++.+.+||.++.+.+.+++.+. ..+..+++||+.||+++ +++.|+++|++++++++.+.+.. +
T Consensus 199 l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~ 274 (353)
T 3vgz_A 199 LYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE---S 274 (353)
T ss_dssp EEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS---C
T ss_pred EEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC---C
Confidence 888775 8899999999999999988631 12356889999999988 57999999999999999998753 2
Q ss_pred eeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCcEEEEEE
Q 023864 235 VRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 235 v~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T~~v~l~~~ 274 (276)
..+.+. || ++|+..+.. +.|.++|+++++++ ..+
T Consensus 275 ----~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~~~-~~~ 310 (353)
T 3vgz_A 275 ----LAVLFNPARNEAYVTHRQA-GKVSVIDAKSYKVV-KTF 310 (353)
T ss_dssp ----CCEEEETTTTEEEEEETTT-TEEEEEETTTTEEE-EEE
T ss_pred ----ceEEECCCCCEEEEEECCC-CeEEEEECCCCeEE-EEE
Confidence 224454 44 699999999 99999999996543 443
No 19
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.51 E-value=7.5e-13 Score=123.80 Aligned_cols=144 Identities=5% Similarity=-0.163 Sum_probs=113.1
Q ss_pred CEEEEEcC-CCCCC-eEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe---------eCCEEEEEeCCCCcEEE
Q 023864 116 DTLFESTG-LYGRS-SVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 116 g~LyeStG-~yg~S-~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw---------k~~~v~V~D~~tlk~i~ 184 (276)
.++|...+ .++.- .|.+||+++++++.+++.+..+ +-.++.++++||+.+. .++.+.+||++++++++
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~ 111 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA 111 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE
Confidence 35787664 22222 8999999999999998888776 5555556789999985 47889999999999999
Q ss_pred EEecC---------CCCeeEEeeCCCEEEEEC-C-CceEEEEcCCCCcEEEE-EEeeeCCEeeeeeeeeEEECCEEEEEe
Q 023864 185 EFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRK-DIVRYKGREVRNLNELEFIKGEVWANV 252 (276)
Q Consensus 185 ~~~~~---------~~EGWGLT~Dg~~L~vSD-G-S~~L~viDp~t~~vi~~-I~V~~~g~pv~~lNELE~idG~lyANv 252 (276)
+++.+ .+++..+++||++||+++ + +++|++|| ++++++++ |.+.. . +. +...+++.|+.+
T Consensus 112 ~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~-~~----~~~~~~~~~~~~ 183 (373)
T 2mad_H 112 DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--C-YH----IHPGAPSTFYLL 183 (373)
T ss_pred EEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--e-EE----EEeCCCceEEEE
Confidence 99864 356778999999999988 4 68999999 99999999 88753 1 11 112244688888
Q ss_pred CCCCCeEEEEeCCCCcEE
Q 023864 253 WQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 253 w~s~d~I~vIDp~T~~v~ 270 (276)
+.+ +.+++||. +++++
T Consensus 184 ~~d-g~~~~vd~-~g~~~ 199 (373)
T 2mad_H 184 CAQ-GGLAKTDH-AGGAA 199 (373)
T ss_pred cCC-CCEEEEEC-CCcEE
Confidence 888 99999999 87765
No 20
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=6e-13 Score=122.59 Aligned_cols=170 Identities=9% Similarity=-0.012 Sum_probs=124.3
Q ss_pred eeEEEEEEecCCCCCceEEEEecCC-EEEEEcCC-----C--CCCeEEEEeCCCCcEEEEeecCCCc-----eEEEEEE-
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-----Y--GRSSVRRVALETGKVEAINQMEGSY-----FGEGLTL- 157 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg-~LyeStG~-----y--g~S~I~~iDl~tgkv~~~~~l~~~~-----FgEGit~- 157 (276)
+.+++.++|... .. +++|++|| +||.+.-. . ..+.|.+||+++++++++++++... .+.++++
T Consensus 40 t~~~~~~i~~g~--~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~s 116 (361)
T 2oiz_A 40 NGKFLGMVPTAF--NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQT 116 (361)
T ss_dssp TCCEEEEEECCE--EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEEC
T ss_pred CCeEEEEecCCC--CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEEC
Confidence 345677888643 33 99999997 58876421 1 2467999999999999999876321 2335555
Q ss_pred -eCCEEEEEEee-CCEEEEEeCCCCcEEEE-EecCC--------------------------------------------
Q 023864 158 -LGEKLFQVTWL-QKTGFIYDQNNLNKLEE-FTHQM-------------------------------------------- 190 (276)
Q Consensus 158 -~g~~LyqlTwk-~~~v~V~D~~tlk~i~~-~~~~~-------------------------------------------- 190 (276)
++++||+.++. ++.+.+||.++.+++++ ++.+.
T Consensus 117 pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~ 196 (361)
T 2oiz_A 117 TDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMF 196 (361)
T ss_dssp TTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCS
T ss_pred CCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceE
Confidence 67899999996 79999999999888777 32100
Q ss_pred --------------------------------------------------------CCe---eEEeeCCCEEEEEC---C
Q 023864 191 --------------------------------------------------------KDG---WGLATDGKVLFGSD---G 208 (276)
Q Consensus 191 --------------------------------------------------------~EG---WGLT~Dg~~L~vSD---G 208 (276)
+.| .++++||+++|+++ |
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 197 SVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp CTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred cCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 011 45677889999963 2
Q ss_pred --------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCc-EEEEEE
Q 023864 209 --------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQAFG-SSLVYV 274 (276)
Q Consensus 209 --------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T~~-v~l~~~ 274 (276)
+++|++||++|+++++++.++. +..+.+. || +||+.++ +.|.+||++|++ .++++|
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-------p~~ia~spdg~~l~v~n~---~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD-------ALSMTIDQQRNLMLTLDG---GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT-------CCEEEEETTTTEEEEECS---SCEEEEECSSSSCEEEEEE
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC-------eeEEEECCCCCEEEEeCC---CeEEEEECCCCcceeeEEe
Confidence 5689999999999999999873 4556666 44 7999886 779999999961 444765
No 21
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.48 E-value=8.2e-12 Score=108.60 Aligned_cols=159 Identities=9% Similarity=0.038 Sum_probs=114.6
Q ss_pred CCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEee--CCEEEEEeCCC
Q 023864 105 AFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL--QKTGFIYDQNN 179 (276)
Q Consensus 105 aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk--~~~v~V~D~~t 179 (276)
....|++++++ +.||.+.. +.+.|.++|++..........+ ...+.|++++ +++||+.++. .+++.+++.+.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDS--QLDRIEVAKMDGTQRRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCccEEEEEecCCeEEEEEC--CCCEEEEEEcCCCCEEEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 45689999985 78999865 7889999999754322222222 2357789997 5899999997 68999998764
Q ss_pred C--cEEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCC
Q 023864 180 L--NKLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVW 256 (276)
Q Consensus 180 l--k~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~ 256 (276)
. +.+.......|.|..+++|+++||++| ++++|+++|+++.+....+. .. ..+..|...+|+||+..|.+
T Consensus 156 ~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~----~~P~gi~~d~~~lyva~~~~- 228 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--GL----QYPFAVTSYGKNLYYTDWKT- 228 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--CC----CSEEEEEEETTEEEEEETTT-
T ss_pred CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec--CC----CCceEEEEeCCEEEEEECCC-
Confidence 2 222211122456777888899999999 78999999998754433332 11 24455677789999999999
Q ss_pred CeEEEEeCCCCcEEEEEE
Q 023864 257 PCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 257 d~I~vIDp~T~~v~l~~~ 274 (276)
++|.+||+++|++ +..|
T Consensus 229 ~~v~~~d~~~g~~-~~~i 245 (267)
T 1npe_A 229 NSVIAMDLAISKE-MDTF 245 (267)
T ss_dssp TEEEEEETTTTEE-EEEE
T ss_pred CeEEEEeCCCCCc-eEEE
Confidence 9999999999654 4555
No 22
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.48 E-value=3.2e-12 Score=124.91 Aligned_cols=170 Identities=5% Similarity=-0.091 Sum_probs=128.8
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeC--CCCcEEEEeecCCCceEEEEEE----eCCEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVAL--ETGKVEAINQMEGSYFGEGLTL----LGEKLFQ 164 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl--~tgkv~~~~~l~~~~FgEGit~----~g~~Lyq 164 (276)
+.+++++++.... ..++.|++||+ ||.+.. + +.|++||+ ++++++.+++.+..+.+..++. ++++||+
T Consensus 168 t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~--d-~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v 242 (543)
T 1nir_A 168 SKKIVKVIDTGYA--VHISRMSASGRYLLVIGR--D-ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIA 242 (543)
T ss_dssp TCCEEEEEECSTT--EEEEEECTTSCEEEEEET--T-SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred CceEEEEEecCcc--cceEEECCCCCEEEEECC--C-CeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEE
Confidence 4467888885333 56999999985 665433 4 99999999 8999999988777665444444 5679999
Q ss_pred EEeeCCEEEEEeCCCCcEEEEEecCC---------CC----eeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEE--EEEe
Q 023864 165 VTWLQKTGFIYDQNNLNKLEEFTHQM---------KD----GWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIR--KDIV 228 (276)
Q Consensus 165 lTwk~~~v~V~D~~tlk~i~~~~~~~---------~E----GWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~--~I~V 228 (276)
.++.++.+.++|.+|++++++++... ++ +..+++|++.+|+++ ++++|.++|.++.+.++ +|.+
T Consensus 243 ~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 243 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC
T ss_pred EEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc
Confidence 99999999999999999999997520 12 344678899999988 79999999999876554 4544
Q ss_pred eeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCcEEEEEE
Q 023864 229 RYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 229 ~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T~~v~l~~~ 274 (276)
+. .+..+.+. || ++|+....+ |.|.+||++|++ .++.+
T Consensus 323 ~~------~~~~~~~spdg~~l~va~~~~-~~v~v~D~~tg~-l~~~i 362 (543)
T 1nir_A 323 AP------FLHDGGWDSSHRYFMTAANNS-NKVAVIDSKDRR-LSALV 362 (543)
T ss_dssp CS------SCCCEEECTTSCEEEEEEGGG-TEEEEEETTTTE-EEEEE
T ss_pred Cc------CccCceECCCCCEEEEEecCC-CeEEEEECCCCe-EEEee
Confidence 32 33344455 45 599888888 999999999965 44554
No 23
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=1.9e-12 Score=128.50 Aligned_cols=113 Identities=11% Similarity=0.032 Sum_probs=96.4
Q ss_pred EecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEE--eCCEEEEEEeeCCEEEEEeCC--CCcEEEEEe
Q 023864 112 YAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQKTGFIYDQN--NLNKLEEFT 187 (276)
Q Consensus 112 ~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~--~g~~LyqlTwk~~~v~V~D~~--tlk~i~~~~ 187 (276)
.++++.+|++.. +.+.|.+||++|++++.+++++..+. |+++ +++.+|+.+ .++.+.+||.. +++++.+++
T Consensus 163 ~d~~~~~~V~~~--~~~~V~viD~~t~~v~~~i~~g~~p~--~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 163 WDLENLFSVTLR--DAGQIALIDGSTYEIKTVLDTGYAVH--ISRLSASGRYLFVIG-RDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp CCGGGEEEEEET--TTTEEEEEETTTCCEEEEEECSSCEE--EEEECTTSCEEEEEE-TTSEEEEEETTSSSCCEEEEEE
T ss_pred cCCCceEEEEeC--CCCeEEEEECCCCeEEEEEeCCCCcc--ceEECCCCCEEEEEc-CCCeEEEEECCCCCCcEeEEEe
Confidence 445568888766 88999999999999999999887755 5555 567899877 57899999996 999999998
Q ss_pred cC-CCCeeEEe----eCCCEEEEEC-CCceEEEEcCCCCcEEEEEEee
Q 023864 188 HQ-MKDGWGLA----TDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 188 ~~-~~EGWGLT----~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~ 229 (276)
.+ .++|..++ +||++||++| .+++|.++|.+|++++++|.++
T Consensus 238 ~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 238 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc
Confidence 75 45777888 6999999999 6899999999999999999985
No 24
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=9.9e-13 Score=125.83 Aligned_cols=146 Identities=10% Similarity=-0.062 Sum_probs=108.5
Q ss_pred cC-CEEEEEcCC--CCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe---------eCCEEEEEeCCCCc
Q 023864 114 EN-DTLFESTGL--YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLN 181 (276)
Q Consensus 114 ~d-g~LyeStG~--yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw---------k~~~v~V~D~~tlk 181 (276)
|| .++|++... ...+.|.++|.+|++++.+++.+..+ +-.++.++.+||+.++ .++.+.+||++|++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 44 468887652 12679999999999999999999887 3333334689999996 46889999999999
Q ss_pred EEEEEecC---------CCCeeEEeeCCCEEEEEC-C-CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECC-EEE
Q 023864 182 KLEEFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKG-EVW 249 (276)
Q Consensus 182 ~i~~~~~~---------~~EGWGLT~Dg~~L~vSD-G-S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG-~ly 249 (276)
++++++.+ .+.+..+++||++||++| + ++.|.+||.++++++++|.+.. ... ..-.+. .++
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~-----~~P~g~~~~~ 193 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYH-----IFPTAPDTFF 193 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEE-----EEEEETTEEE
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--cce-----eecCCCceeE
Confidence 99999864 356788999999999998 3 7899999999999999998852 210 011122 334
Q ss_pred EEeCCCCCeEEEEeCCC-CcE
Q 023864 250 ANVWQVWPCIPYAYLQA-FGS 269 (276)
Q Consensus 250 ANvw~s~d~I~vIDp~T-~~v 269 (276)
+.+ .+ +.+++||.++ +++
T Consensus 194 ~~~-~D-G~~~~v~~~~~g~v 212 (386)
T 3sjl_D 194 MHC-RD-GSLAKVAFGTEGTP 212 (386)
T ss_dssp EEE-TT-SCEEEEECCSSSCC
T ss_pred EEC-CC-CCEEEEECCCCCeE
Confidence 444 45 6777777765 443
No 25
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.47 E-value=9.4e-12 Score=111.38 Aligned_cols=164 Identities=17% Similarity=0.200 Sum_probs=130.2
Q ss_pred eEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ 169 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~ 169 (276)
.+++.++++... ..++.|++||+ ||.+++ .+..|++||+++++++.....+..+. ++++. +++||+....+
T Consensus 22 ~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~--~d~~i~v~d~~~~~~~~~~~~~~~v~--~~~~spdg~~l~~~~~~~ 95 (391)
T 1l0q_A 22 NKVTATIPVGSN--PMGAVISPDGTKVYVANA--HSNDVSIIDTATNNVIATVPAGSSPQ--GVAVSPDGKQVYVTNMAS 95 (391)
T ss_dssp TEEEEEEECSSS--EEEEEECTTSSEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSEE--EEEECTTSSEEEEEETTT
T ss_pred CeEEEEeecCCC--cceEEECCCCCEEEEECC--CCCeEEEEECCCCeEEEEEECCCCcc--ceEECCCCCEEEEEECCC
Confidence 367778877433 57999999975 777665 67899999999999999888877544 55554 67899999889
Q ss_pred CEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC
Q 023864 170 KTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG 246 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG 246 (276)
+.+.+||.++.+.+..+... ...+..+++||+.||++. +...|+++|+++.+.+..+..+. .++.+.+. +|
T Consensus 96 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~dg 169 (391)
T 1l0q_A 96 STLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR------SPKGIAVTPDG 169 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS------SEEEEEECTTS
T ss_pred CEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC------CcceEEECCCC
Confidence 99999999999999988765 234455678999998776 58899999999999988887753 34556665 44
Q ss_pred -EEEEEeCCCCCeEEEEeCCCCcE
Q 023864 247 -EVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 247 -~lyANvw~s~d~I~vIDp~T~~v 269 (276)
+||+..... +.|.++|+++++.
T Consensus 170 ~~l~~~~~~~-~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 170 TKVYVANFDS-MSISVIDTVTNSV 192 (391)
T ss_dssp SEEEEEETTT-TEEEEEETTTTEE
T ss_pred CEEEEEeCCC-CEEEEEECCCCeE
Confidence 698888788 9999999999654
No 26
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.46 E-value=3.3e-12 Score=124.85 Aligned_cols=169 Identities=12% Similarity=0.071 Sum_probs=129.1
Q ss_pred eeEEEEEEecCCCCCceEEEEec----CCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCC----------CceEEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAE----NDT-LFESTGLYGRSSVRRVALETGKVEAINQMEG----------SYFGEGLT 156 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~----dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~----------~~FgEGit 156 (276)
+.+++.++++. ....++.|+| ||+ ||.+ .|..+.|.+||.+|+++++.+++.. .....++.
T Consensus 211 t~~~~~~i~~g--~~p~~va~sp~~~~dg~~l~v~--~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 211 EPTKVAEIKIG--IEARSVESSKFKGYEDRYTIAG--AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp SCEEEEEEECC--SEEEEEEECCSTTCTTTEEEEE--EEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred CCcEEEEEecC--CCcceEEeCCCcCCCCCEEEEE--EccCCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 45788999974 4457999999 875 7754 3578999999999999999887632 22344566
Q ss_pred Ee--CCEEEEEEeeCCEEEEEeCCCCcEEE--EEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeee
Q 023864 157 LL--GEKLFQVTWLQKTGFIYDQNNLNKLE--EFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY 230 (276)
Q Consensus 157 ~~--g~~LyqlTwk~~~v~V~D~~tlk~i~--~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~ 230 (276)
.. ++++|+....++++.++|..+.+.+. +++.+ .+.+.++++||++||+++ ++++|.++|++++++++++.++.
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~ 366 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 366 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC
Confidence 64 67888888889999999999877655 66543 456778999999999977 79999999999999999999875
Q ss_pred CCEeeeeeeeeEEEC-CEEEEEeC-CCCCeEEEEeCCC
Q 023864 231 KGREVRNLNELEFIK-GEVWANVW-QVWPCIPYAYLQA 266 (276)
Q Consensus 231 ~g~pv~~lNELE~id-G~lyANvw-~s~d~I~vIDp~T 266 (276)
..++-...| +...+ |.+||..- .+ +.|.+||.++
T Consensus 367 ~ph~g~g~~-~~~p~~g~~~~s~~~~d-~~V~v~d~~~ 402 (543)
T 1nir_A 367 TPHPGRGAN-FVHPKYGPVWSTSHLGD-GSISLIGTDP 402 (543)
T ss_dssp SBCCTTCEE-EEETTTEEEEEEEBSSS-SEEEEEECCT
T ss_pred CCCCCCCcc-cCCCCCccEEEeccCCC-ceEEEEEeCC
Confidence 333322333 21223 78998875 46 8999999998
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.45 E-value=2.3e-11 Score=108.86 Aligned_cols=165 Identities=13% Similarity=0.152 Sum_probs=130.2
Q ss_pred eEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ 169 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~ 169 (276)
-+++..+++.. -..++.|++||+ ||.+++ ++..|++||+++++.+.....+..+ .++++. ++.||+....+
T Consensus 106 ~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 106 NTVAGTVKTGK--SPLGLALSPDGKKLYVTNN--GDKTVSVINTVTKAVINTVSVGRSP--KGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp TEEEEEEECSS--SEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECCSSE--EEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEeCCC--CcceEEECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEecCCCc--ceEEECCCCCEEEEEeCCC
Confidence 35667777643 347999999875 767655 7789999999999998888877665 566665 56899999999
Q ss_pred CEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEEC---CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-
Q 023864 170 KTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD---GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI- 244 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD---GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i- 244 (276)
+.+.+||..+.+.+..++.. ...+..+++||+.|++++ +...|+++|+++.+.+..+.... .++.+.+.
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~s~ 253 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP------DPAGIAVTP 253 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS------SEEEEEECT
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC------CccEEEEcc
Confidence 99999999999999888764 234455788999999977 68899999999999988887653 23455665
Q ss_pred CC-EEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 245 KG-EVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 245 dG-~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
|| +||+..-.. +.|.++|.++++..
T Consensus 254 dg~~l~~s~~~d-~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 254 DGKKVYVALSFX-NTVSVIDTATNTIT 279 (391)
T ss_dssp TSSEEEEEETTT-TEEEEEETTTTEEE
T ss_pred CCCEEEEEcCCC-CEEEEEECCCCcEE
Confidence 44 699888777 99999999996543
No 28
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.44 E-value=5.6e-12 Score=110.32 Aligned_cols=172 Identities=11% Similarity=0.127 Sum_probs=126.1
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCe-EEEEeCCCC-cEEEE--eecCCCceEEEEEEe--CCEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSS-VRRVALETG-KVEAI--NQMEGSYFGEGLTLL--GEKLFQ 164 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~-I~~iDl~tg-kv~~~--~~l~~~~FgEGit~~--g~~Lyq 164 (276)
+.++++++++.... .++.|+|||+ ||.+.. +... |.+||++.. ++... ..++....+.++++. ++.||+
T Consensus 117 ~~~~~~~~~~~~~~--~~~~~spdg~~l~~~~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 117 KNKFISTIPIPYDA--VGIAISPNGNGLILIDR--SSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp TTEEEEEEECCTTE--EEEEECTTSSCEEEEEE--TTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred CCCeEEEEECCCCc--cceEECCCCCEEEEEec--CCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 34677888874433 7999999985 887655 5556 999988753 33211 222333335677775 457999
Q ss_pred EEeeCCEEEEEeCCCCcE---EEEEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcE--EEEEEee--eCCEee
Q 023864 165 VTWLQKTGFIYDQNNLNK---LEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKV--IRKDIVR--YKGREV 235 (276)
Q Consensus 165 lTwk~~~v~V~D~~tlk~---i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~v--i~~I~V~--~~g~pv 235 (276)
..+.++.+.+||.++.+. +.+++.+ .+.+..+++||++||+++ +.+.|+++|++++++ +..+... .++.+.
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPL 272 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGG
T ss_pred EeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCc
Confidence 999999999999999998 8888755 457778899999999988 688999999999988 4444433 234444
Q ss_pred eeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCc
Q 023864 236 RNLNELEFI-KG-EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 236 ~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T~~ 268 (276)
...|.+.+. || +||+..... +.|.++|.++..
T Consensus 273 ~~~~~~~~spdg~~l~v~~~~~-~~v~v~d~~~~~ 306 (331)
T 3u4y_A 273 FGANQMALNKTETKLFISANIS-RELKVFTISGKV 306 (331)
T ss_dssp TTCCCEEECTTSSEEEEEETTT-TEEEEEETTSCE
T ss_pred ccccceEECCCCCEEEEecCCC-CcEEEEEecCCc
Confidence 444667776 44 699999888 999999998843
No 29
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.44 E-value=6.3e-13 Score=115.98 Aligned_cols=151 Identities=9% Similarity=-0.001 Sum_probs=117.4
Q ss_pred EEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC--CceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCcEEE
Q 023864 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG--SYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~--~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk~i~ 184 (276)
|+.+.+++++|.+++ +...|.+||+++++++..++++. .+. ++++. ++.+|+....++.+.+||.++.+.+.
T Consensus 4 g~~~~~~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDKFGPG--TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSCCSSC--EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cccccCCCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCCCCCc--eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 666777789998877 78999999999999999988887 544 55554 56899999999999999999999999
Q ss_pred EEecCC--------CCeeEEeeCCCEEEEECC------------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE
Q 023864 185 EFTHQM--------KDGWGLATDGKVLFGSDG------------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 185 ~~~~~~--------~EGWGLT~Dg~~L~vSDG------------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i 244 (276)
+++.+. +.+..+++||+.||+++. .+.|+++|++++++.+.+.+..... .+..+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s 156 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR---QVYLMRAA 156 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS---SCCCEEEC
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC---cccceeEC
Confidence 887642 467788999999999773 4899999999976655444433222 34445554
Q ss_pred -CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 245 -KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
||++|+. . +.|.++|+++++++
T Consensus 157 ~dg~l~~~---~-~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 157 DDGSLYVA---G-PDIYKMDVKTGKYT 179 (349)
T ss_dssp TTSCEEEE---S-SSEEEECTTTCCEE
T ss_pred CCCcEEEc---c-CcEEEEeCCCCcee
Confidence 6778884 4 56999999997754
No 30
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=5.3e-13 Score=126.24 Aligned_cols=137 Identities=7% Similarity=-0.185 Sum_probs=111.5
Q ss_pred CEEEEEcCCCCCC----eEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe---------eCCEEEEEeCCCCcE
Q 023864 116 DTLFESTGLYGRS----SVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLNK 182 (276)
Q Consensus 116 g~LyeStG~yg~S----~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw---------k~~~v~V~D~~tlk~ 182 (276)
.++|++.. +.+ .|.+||++|++++.+++++..+ +-.++.++.++|+.++ +++.+.+||+.|+++
T Consensus 32 ~~~yV~~~--~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 32 RRSHITLP--AYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TEEEEEEC--TTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CeEEEECC--ccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 57787655 444 8999999999999999999887 5555556789999995 689999999999999
Q ss_pred EEEEecC---------CCCeeEEeeCCCEEEEEC-C-CceEEE--EcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEE
Q 023864 183 LEEFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQ--IDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVW 249 (276)
Q Consensus 183 i~~~~~~---------~~EGWGLT~Dg~~L~vSD-G-S~~L~v--iDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~ly 249 (276)
+++++.+ .|++..+++||++||++| + ++.|.+ ||++| +++|.+... + + +...++..|
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---~-~---~~p~g~~~~ 178 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---F-H---IHPGAAATH 178 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---C-C---CEEEETTEE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---e-E---EccCCCeEE
Confidence 9999864 478999999999999998 4 678999 99999 678877531 1 1 223445688
Q ss_pred EEeCCCCCeEEEEeCCC
Q 023864 250 ANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 250 ANvw~s~d~I~vIDp~T 266 (276)
+.++.+ +.+++||.++
T Consensus 179 ~~~~~d-g~~~~vd~~~ 194 (368)
T 1mda_H 179 YLGSCP-ASLAASDLAA 194 (368)
T ss_dssp ECCCCT-TSCEEEECCS
T ss_pred EEEcCC-CCEEEEECcc
Confidence 888788 9999999998
No 31
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.41 E-value=3.6e-11 Score=108.05 Aligned_cols=161 Identities=11% Similarity=0.077 Sum_probs=120.4
Q ss_pred CceEEEEecCCEEEEEcCCCCC------------------------CeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CC
Q 023864 106 FTQGLLYAENDTLFESTGLYGR------------------------SSVRRVALETGKVEAINQMEGSYFGEGLTLL-GE 160 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~yg~------------------------S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~ 160 (276)
...|++++++|+||.+.. +. +.|.++|.++|+++....-+.-..+.|++++ ++
T Consensus 25 ~v~~va~d~~G~l~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHR--GDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CEEEEEECTTCCEEEEEC--TTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred CceEEEECCCCCEEEEeC--CCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 356999999999998755 33 4799999999999766543443467899997 46
Q ss_pred EEEEEEeeCCEEEEEeCCCCc-EEEEEec---------C--CCCeeEEeeCCCEEEEEC--CCceEEEEcCCCCcEEEEE
Q 023864 161 KLFQVTWLQKTGFIYDQNNLN-KLEEFTH---------Q--MKDGWGLATDGKVLFGSD--GSSMLYQIDPQTLKVIRKD 226 (276)
Q Consensus 161 ~LyqlTwk~~~v~V~D~~tlk-~i~~~~~---------~--~~EGWGLT~Dg~~L~vSD--GS~~L~viDp~t~~vi~~I 226 (276)
+||+....++++.+||++... .+.++.. . .|.|..+.+++..||++| +.++|.++| .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 899999999999999987543 5555531 1 234444555578899999 488999999 557777766
Q ss_pred EeeeCC-----EeeeeeeeeEEE-C-CEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 227 IVRYKG-----REVRNLNELEFI-K-GEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 227 ~V~~~g-----~pv~~lNELE~i-d-G~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.....+ ..+..++-|.+. + |.||+..+.. ++|.++|+++|+.+
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-GRIQCFKTDTKEFV 231 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT-TEEEEEETTTCCEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC-CEEEEEECCCCcEE
Confidence 443222 245567888886 4 8999999999 99999999986653
No 32
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.40 E-value=3e-11 Score=105.29 Aligned_cols=132 Identities=12% Similarity=0.080 Sum_probs=98.1
Q ss_pred eEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC-----ceEEEEEE--eCCEEEE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGS-----YFGEGLTL--LGEKLFQ 164 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~-----~FgEGit~--~g~~Lyq 164 (276)
.+++++++.....-..++.|++||+ +|.+.. +...|.+||+++++++..++++.. ....++++ +++.||.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 108 (349)
T 1jmx_B 31 DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYA 108 (349)
T ss_dssp TEEEEEEECSSCCSSCEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEE
T ss_pred CcEEEEEecCCCCCCceeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEE
Confidence 4677788764422346999999975 887765 778999999999999888887642 12235555 4668998
Q ss_pred EEee-----------CCEEEEEeCCC---CcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEee
Q 023864 165 VTWL-----------QKTGFIYDQNN---LNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 165 lTwk-----------~~~v~V~D~~t---lk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~ 229 (276)
.... ++.+.+||.++ .+.+..++.+ ...+..+++||+ +|+.++ .|+++|+++++++..+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 109 TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp EEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECST
T ss_pred EcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecccccc
Confidence 8855 68999999998 4445566544 235556889999 888654 4999999999998887765
No 33
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.39 E-value=1.2e-11 Score=111.11 Aligned_cols=174 Identities=9% Similarity=-0.004 Sum_probs=121.8
Q ss_pred eEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc-EEEEee--------cCCCceEEEEEEe--CCE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK-VEAINQ--------MEGSYFGEGLTLL--GEK 161 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk-v~~~~~--------l~~~~FgEGit~~--g~~ 161 (276)
-+++..+....-....|++++++|+||.+.. +...|++||++... .+.... -+.-..+.|++++ +++
T Consensus 79 g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 79 AEILQSSGKNLFYLPHGLSIDTDGNYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp CCEEEEECTTTCSSEEEEEECTTSCEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC
T ss_pred CeEEeccCCCccCCceEEEECCCCCEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe
Confidence 3455555544445678999999999998755 78899999986542 333331 1122357899998 689
Q ss_pred EEEEEe-eCCEEEEEeCCCCcEEEEEecC------------CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEE
Q 023864 162 LFQVTW-LQKTGFIYDQNNLNKLEEFTHQ------------MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDI 227 (276)
Q Consensus 162 LyqlTw-k~~~v~V~D~~tlk~i~~~~~~------------~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~ 227 (276)
||+... .++++.+|| .+.+.+.++... .|.|..+++|+..||++| +.++|.++|+++++.++++.
T Consensus 157 lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 157 VFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 999995 799999999 566777776421 145555667888999999 78999999999999998886
Q ss_pred eeeCCEeeeee----eeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 228 VRYKGREVRNL----NELEFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 228 V~~~g~pv~~l----NELE~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
....+.....+ .-+-..+|.+|+..+.. +.|.++|+.+|+.+
T Consensus 236 ~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~-~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 236 HASFGRNVFAISYIPGFLFAVNGKPYFGDQEP-VQGFVMNFSSGEII 281 (329)
T ss_dssp CTTTTTCEEEEEEETTEEEEEECCCCTTCSCC-CCEEEEETTTCCEE
T ss_pred ccccCCCcceeeecCCEEEEeCCCEEeccCCC-cEEEEEEcCCCeEE
Confidence 54333211111 12223356666666667 79999999997654
No 34
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.39 E-value=2e-11 Score=105.64 Aligned_cols=139 Identities=12% Similarity=0.028 Sum_probs=112.0
Q ss_pred EEEEcCCCCCCeEEEEeCCCCcEEEEeecCC---CceEEEEEE--eCCEEEEEEeeCCEEEEEeCCCCcEEEEEecC---
Q 023864 118 LFESTGLYGRSSVRRVALETGKVEAINQMEG---SYFGEGLTL--LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--- 189 (276)
Q Consensus 118 LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~---~~FgEGit~--~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~--- 189 (276)
++.+++ +...|..||+++++++..+.++. .+. ++++ +++.+|+....++.+.++|..+.+.+.+++.+
T Consensus 3 ~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 3 YILAPA--RPDKLVVIDTEKMAVDKVITIADAGPTPM--VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEE--TTTEEEEEETTTTEEEEEEECTTCTTCCC--CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEEEcC--CCCeEEEEECCCCcEEEEEEcCCCCCCcc--ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 445455 67899999999999999998887 444 5555 45689999999999999999999999988753
Q ss_pred ----CCCeeEEeeCCCEEEEEC------------CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEE
Q 023864 190 ----MKDGWGLATDGKVLFGSD------------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWAN 251 (276)
Q Consensus 190 ----~~EGWGLT~Dg~~L~vSD------------GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyAN 251 (276)
.+.+..+++||+.||+++ +.+.|+++|++++++++.+.++. .++.+.+. || +||+.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR------QITMLAWARDGSKLYGL 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS------SCCCEEECTTSSCEEEE
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC------CcceeEECCCCCEEEEe
Confidence 356778899999999986 46899999999999998887753 34556665 55 48887
Q ss_pred eCCCCCeEEEEeCCCCcEE
Q 023864 252 VWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 252 vw~s~d~I~vIDp~T~~v~ 270 (276)
+ +.|.++|+++++..
T Consensus 153 ---~-~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 153 ---G-RDLHVMDPEAGTLV 167 (337)
T ss_dssp ---S-SSEEEEETTTTEEE
T ss_pred ---C-CeEEEEECCCCcEe
Confidence 6 88999999997654
No 35
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.37 E-value=5.7e-12 Score=126.70 Aligned_cols=164 Identities=13% Similarity=0.116 Sum_probs=129.7
Q ss_pred eeEEEE--EEecCCCCCceEEEE-e-cC-CEEEEEcC---------------CCCCCeEEEEeCCCCcEEEEeecCCCce
Q 023864 92 TIQVVN--EFPHDPRAFTQGLLY-A-EN-DTLFESTG---------------LYGRSSVRRVALETGKVEAINQMEGSYF 151 (276)
Q Consensus 92 t~~Vv~--~~Phd~~aFTQGL~~-~-~d-g~LyeStG---------------~yg~S~I~~iDl~tgkv~~~~~l~~~~F 151 (276)
+.++++ ++|.. .-..|+.+ . || +.+|+++- ....+.+.++|.+|+++..+++++.++
T Consensus 121 t~~~~~ii~ip~g--~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~p- 197 (595)
T 1fwx_A 121 VMKCDAILEIPNA--KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNL- 197 (595)
T ss_dssp TTEEEEEEECSSC--CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCC-
T ss_pred CceEeeEEeCCCC--CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCc-
Confidence 445555 66653 33569998 4 66 46887631 124678999999999999999998775
Q ss_pred EEEEEE--eCCEEEEEEeeC-------------------------------------CEEEEEeCCC--CcE-EEEEecC
Q 023864 152 GEGLTL--LGEKLFQVTWLQ-------------------------------------KTGFIYDQNN--LNK-LEEFTHQ 189 (276)
Q Consensus 152 gEGit~--~g~~LyqlTwk~-------------------------------------~~v~V~D~~t--lk~-i~~~~~~ 189 (276)
+|+++ +|+++|+.+..+ +.+.|+|.++ .++ +++++.+
T Consensus 198 -d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg 276 (595)
T 1fwx_A 198 -DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA 276 (595)
T ss_dssp -CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE
T ss_pred -cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC
Confidence 55555 688999998765 3489999998 556 7899876
Q ss_pred -CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCc------------EEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCC
Q 023864 190 -MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLK------------VIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (276)
Q Consensus 190 -~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~------------vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~ 254 (276)
.++|..++|||+++|++| ++++|+++|.++++ ++.++.|+. .|. -+++. ||++|+.+|.
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~--gP~----h~aF~~dG~aY~t~~l 350 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL--GPL----HTAFDGRGNAYTSLFL 350 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS--CEE----EEEECTTSEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC--Ccc----eEEECCCCeEEEEEec
Confidence 689999999999999999 79999999999874 778888876 333 34565 6899999999
Q ss_pred CCCeEEEEeCCC
Q 023864 255 VWPCIPYAYLQA 266 (276)
Q Consensus 255 s~d~I~vIDp~T 266 (276)
+ +.|+++|.++
T Consensus 351 d-sqV~kwdi~~ 361 (595)
T 1fwx_A 351 D-SQVVKWNIED 361 (595)
T ss_dssp T-TEEEEEEHHH
T ss_pred C-CcEEEEEhhH
Confidence 9 9999999887
No 36
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.37 E-value=1.9e-11 Score=105.76 Aligned_cols=135 Identities=18% Similarity=0.227 Sum_probs=105.4
Q ss_pred eeEEEEEEecCCCC-CceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC------CceEEEEEEeCCEEE
Q 023864 92 TIQVVNEFPHDPRA-FTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEG------SYFGEGLTLLGEKLF 163 (276)
Q Consensus 92 t~~Vv~~~Phd~~a-FTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~------~~FgEGit~~g~~Ly 163 (276)
+.+++.+++++... ...++.|++|| .||.+.. +...|.+||+++++++..+.++. .+.+..+..++++||
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 97 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA 97 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEE
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC--CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEE
Confidence 34678888875422 25699999998 6888765 67899999999999988888765 444333333467899
Q ss_pred EEE--------e---eCCEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeee
Q 023864 164 QVT--------W---LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY 230 (276)
Q Consensus 164 qlT--------w---k~~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~ 230 (276)
+.. | .++.+.+||.++.+.+..++.+ .+.+..+++||++||+++ +.|+++|++++++++.+....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~i~~~d~~~~~~~~~~~~~~ 174 (337)
T 1pby_B 98 IYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLG--RDLHVMDPEAGTLVEDKPIQS 174 (337)
T ss_dssp EEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEES--SSEEEEETTTTEEEEEECSTT
T ss_pred EEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeC--CeEEEEECCCCcEeeeeeccc
Confidence 985 2 4699999999999999988764 356777899999999994 689999999999988887654
No 37
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.36 E-value=2.6e-11 Score=106.06 Aligned_cols=162 Identities=9% Similarity=-0.009 Sum_probs=117.9
Q ss_pred EEEEecCCCCCceEEEEecCCE-EEEEcCCCCCC--eEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCC
Q 023864 96 VNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRS--SVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQK 170 (276)
Q Consensus 96 v~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S--~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~ 170 (276)
+..+++...+. .++.|++||+ || .+.. +.. .|.+||+++++++...+.+..+ .++++. ++.||+....++
T Consensus 76 ~~~~~~~~~~~-~~~~~s~dg~~l~-~~~~-~~~~~~i~v~d~~~~~~~~~~~~~~~~--~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 76 VVAIQEGQSSM-ADVDITPDDQFAV-TVTG-LNHPFNMQSYSFLKNKFISTIPIPYDA--VGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp EEEEEECSSCC-CCEEECTTSSEEE-ECCC-SSSSCEEEEEETTTTEEEEEEECCTTE--EEEEECTTSSCEEEEEETTT
T ss_pred EEecccCCCCc-cceEECCCCCEEE-EecC-CCCcccEEEEECCCCCeEEEEECCCCc--cceEECCCCCEEEEEecCCC
Confidence 44555433333 4599999976 66 3331 223 9999999999999988887775 466665 457999999988
Q ss_pred E-EEEEeCCCCcEE-----EEEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcE---EEEEEeeeCCEeeeeee
Q 023864 171 T-GFIYDQNNLNKL-----EEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKV---IRKDIVRYKGREVRNLN 239 (276)
Q Consensus 171 ~-v~V~D~~tlk~i-----~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~v---i~~I~V~~~g~pv~~lN 239 (276)
. +.+||.+.-..+ ..++.. .+.+..+++||++||+++ +++.|+++|++++++ +.++..+. .++
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~------~~~ 224 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNN------LPG 224 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSS------CCC
T ss_pred ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCC------CCc
Confidence 8 999887653322 222222 346667889999999988 689999999999998 77666542 344
Q ss_pred eeEEE-CC-EEEEEeCCCCCeEEEEeCCCCcE
Q 023864 240 ELEFI-KG-EVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 240 ELE~i-dG-~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.+.+. || +||+..... +.|.++|+++++.
T Consensus 225 ~~~~spdg~~l~v~~~~~-~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTEST-VDVFNFNQLSGTL 255 (331)
T ss_dssp CEEECTTSSEEEEECSSE-EEEEEEETTTTEE
T ss_pred eEEECCCCCEEEEEEcCC-CEEEEEECCCCce
Confidence 56665 55 599998888 9999999999775
No 38
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=1.6e-10 Score=102.37 Aligned_cols=162 Identities=10% Similarity=0.084 Sum_probs=112.4
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC---CCceEEEEEEe-CCEEEEEEeeC-----------
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME---GSYFGEGLTLL-GEKLFQVTWLQ----------- 169 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~---~~~FgEGit~~-g~~LyqlTwk~----------- 169 (276)
....++.+++||+||.+++ +.|.++|++++++......+ ......+++++ ++++|+.++..
T Consensus 54 ~~~~~i~~~~dG~l~v~~~----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATIG----TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp SCEEEEEEBTTSSEEEEET----TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTC
T ss_pred CceEEEEECCCCCEEEEEC----CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCC
Confidence 4567999999999998763 68999999999875544433 22345677776 47899999753
Q ss_pred CEEEEEeCCCCcEEEEEe-cCCCCeeEEeeCCCEEEEEC-CCceEEEEcC--CCCcEEEE-EEeeeCCEeeeeeeeeEEE
Q 023864 170 KTGFIYDQNNLNKLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDP--QTLKVIRK-DIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~-~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp--~t~~vi~~-I~V~~~g~pv~~lNELE~i 244 (276)
+.++.+|++. +...... ...+.|..+++||+.||++| +.++|+.+|. +++++... +-..... .-..+..|.+.
T Consensus 130 ~~l~~~d~~g-~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d 207 (297)
T 3g4e_A 130 GALYSLFPDH-HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCID 207 (297)
T ss_dssp EEEEEECTTS-CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEB
T ss_pred cEEEEEECCC-CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEEC
Confidence 4788898763 3222111 22357888899999999999 5889999874 77776432 2221110 01234556665
Q ss_pred -CCEEEEEeCCCCCeEEEEeCCCCcEEEEEE
Q 023864 245 -KGEVWANVWQVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vIDp~T~~v~l~~~ 274 (276)
+|.||+..|.. +.|.++||+||+.. ..+
T Consensus 208 ~~G~lwva~~~~-~~v~~~d~~tG~~~-~~i 236 (297)
T 3g4e_A 208 AEGKLWVACYNG-GRVIRLDPVTGKRL-QTV 236 (297)
T ss_dssp TTSCEEEEEETT-TEEEEECTTTCCEE-EEE
T ss_pred CCCCEEEEEcCC-CEEEEEcCCCceEE-EEE
Confidence 78999999999 99999999997644 443
No 39
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.31 E-value=8.2e-11 Score=105.11 Aligned_cols=157 Identities=16% Similarity=0.173 Sum_probs=113.5
Q ss_pred CceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCc--E
Q 023864 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN--K 182 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk--~ 182 (276)
...|+.+++||+||++........|.++|.++|++.....++...|..|++.. ++.+|+....++.++++|+.+.+ +
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v 152 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSI 152 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeE
Confidence 46799999999999876421233588999999998766667777788999865 46899999889999999998642 2
Q ss_pred EEEEe-------c-CCCCeeEEeeCCCEEEEEC-CCceEEEEcCCC-CcEE-EEEEeeeCCEeeeeeeeeEEE-CCEEEE
Q 023864 183 LEEFT-------H-QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQT-LKVI-RKDIVRYKGREVRNLNELEFI-KGEVWA 250 (276)
Q Consensus 183 i~~~~-------~-~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t-~~vi-~~I~V~~~g~pv~~lNELE~i-dG~lyA 250 (276)
..... . +....-|+++||++||++| +.++|+++|++. .++. .++. .. ...+..|.+. +|.||+
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~-~~----~~~P~gi~vd~dG~l~v 227 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF-VE----QTNIDDFAFDVEGNLYG 227 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEE-EE----SCCCSSEEEBTTCCEEE
T ss_pred EEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEE-ec----cCCCCCeEECCCCCEEE
Confidence 11000 0 1224566799999999999 789999999875 3321 1111 11 1245566666 789999
Q ss_pred EeCCCCCeEEEEeCCCCcE
Q 023864 251 NVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 251 Nvw~s~d~I~vIDp~T~~v 269 (276)
..|.. ++|.+|||+ |+.
T Consensus 228 a~~~~-~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 228 ATHIY-NSVVRIAPD-RST 244 (306)
T ss_dssp ECBTT-CCEEEECTT-CCE
T ss_pred EeCCC-CeEEEECCC-CCE
Confidence 99999 999999997 554
No 40
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.30 E-value=4.2e-10 Score=101.98 Aligned_cols=166 Identities=14% Similarity=0.052 Sum_probs=125.0
Q ss_pred EEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEe---
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTW--- 167 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTw--- 167 (276)
+.+.+++. ......++.|++++. ||.+++ .+..|++||+++++.+...+.+.. ..++++. ++.||...+
T Consensus 202 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 202 AYKATVDL-TGKWSKILLYDPIRDLVYCSNW--ISEDISVIDRKTKLEIRKTDKIGL--PRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp CEEEEEEC-SSSSEEEEEEETTTTEEEEEET--TTTEEEEEETTTTEEEEECCCCSE--EEEEEECTTSSEEEEEEEESC
T ss_pred eEEEEEcC-CCCCeeEEEEcCCCCEEEEEec--CCCcEEEEECCCCcEEEEecCCCC--ceEEEEcCCCCEEEEEECCCC
Confidence 45666653 356678999999874 766544 567999999999998887766554 4566664 568999888
Q ss_pred ----eCCEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeee
Q 023864 168 ----LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (276)
Q Consensus 168 ----k~~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNEL 241 (276)
.++.+.+||..+.+.+..+..+ .+.+..+++||+.||++. +..+|.++|+++.+++..+.... .++.+
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~------~~~~~ 350 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD------KPNTI 350 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSS------SEEEE
T ss_pred ccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCC------CCCeE
Confidence 4678999999999998887544 235556788999999985 68899999999999988876542 34566
Q ss_pred EEE-CC-EEEEEeCCC-------------CCeEEEEeCCCCcEE
Q 023864 242 EFI-KG-EVWANVWQV-------------WPCIPYAYLQAFGSS 270 (276)
Q Consensus 242 E~i-dG-~lyANvw~s-------------~d~I~vIDp~T~~v~ 270 (276)
.+. || .||+..... +..|.++|+++++.+
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 676 44 688887654 128999999996543
No 41
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=1e-10 Score=106.15 Aligned_cols=160 Identities=10% Similarity=-0.015 Sum_probs=116.4
Q ss_pred CCCceEEEEecCCEEEEEcCC---CCCCeEEEEeCCCCcEEEEeecCCC-----ceEEEEEEe--CCEEEEEEe---eCC
Q 023864 104 RAFTQGLLYAENDTLFESTGL---YGRSSVRRVALETGKVEAINQMEGS-----YFGEGLTLL--GEKLFQVTW---LQK 170 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~---yg~S~I~~iDl~tgkv~~~~~l~~~-----~FgEGit~~--g~~LyqlTw---k~~ 170 (276)
-...+|+.++++|+||+..-. .+...|.+||+++|++++.+.++.. .|..+++++ ++.+|+... .++
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCC
Confidence 356789999999999986431 1257899999999999888887632 355788998 579999998 899
Q ss_pred EEEEEeCCCCcEEEEEec-------------------------------CCCCeeEEeeCCCEEEEEC-CCceEEEEcCC
Q 023864 171 TGFIYDQNNLNKLEEFTH-------------------------------QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ 218 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~-------------------------------~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~ 218 (276)
.+.+||+++.+....+.. ..+.|.++++||+.||++| .+.+|+.+|..
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 999999988776554411 0135677889999999998 56799999853
Q ss_pred CCc--------EEEEEE-eeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 219 TLK--------VIRKDI-VRYKGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 219 t~~--------vi~~I~-V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
.++ +...+. .+..+ .++-|.+. +|.||++.|.. +.|.++|+++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~g----~pdgia~d~~G~l~va~~~~-~~V~~~d~~~G~ 280 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERYSEKP----ICDGISIDKDHNIYVGDLAH-SAIGVITSADRA 280 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEEEECC----SCSCEEECTTCCEEEEEGGG-TEEEEEETTTTE
T ss_pred HhcCCCCChhhhhcceEecccCC----CCceEEECCCCCEEEEccCC-CeEEEEECCCCC
Confidence 211 001111 12212 44556665 68999999999 999999997765
No 42
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.28 E-value=3.3e-11 Score=110.97 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=91.0
Q ss_pred CEEEEEcCCC---CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEe---------eCCEEEEEeCCCCc
Q 023864 116 DTLFESTGLY---GRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTW---------LQKTGFIYDQNNLN 181 (276)
Q Consensus 116 g~LyeStG~y---g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTw---------k~~~v~V~D~~tlk 181 (276)
.++|++.... .++.|.+||.++++++.+++.+..+ ++++. +++||+.++ .++.+.+||.++++
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p---~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG---HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE---EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC---ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 4688766532 3568999999999999888776554 66665 679999997 46789999999999
Q ss_pred EEEEEecC--------CCCeeEEeeCCCEEEEEC-C-CceEEEEcCCCCcEEEE-EEee
Q 023864 182 KLEEFTHQ--------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRK-DIVR 229 (276)
Q Consensus 182 ~i~~~~~~--------~~EGWGLT~Dg~~L~vSD-G-S~~L~viDp~t~~vi~~-I~V~ 229 (276)
++++++.+ .+.+..+++||++||++| + ++.|.++|+++.+++++ |.+.
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~ 151 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA 151 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC
Confidence 99999853 357788999999999998 4 78999999999999988 6653
No 43
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=5.3e-11 Score=119.74 Aligned_cols=145 Identities=14% Similarity=0.088 Sum_probs=118.1
Q ss_pred CC-EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEE----eCCEEEEEE-----------------eeCCEE
Q 023864 115 ND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL----LGEKLFQVT-----------------WLQKTG 172 (276)
Q Consensus 115 dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~----~g~~LyqlT-----------------wk~~~v 172 (276)
|| .||+... ..++|.++|+++.++.+.+.+|...-.+|+++ .++.+|+.+ |..+.+
T Consensus 100 DG~~lfVnd~--~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDK--ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEET--TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcC--CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 44 5998755 88999999999999988677765445778885 468999985 888899
Q ss_pred EEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEEC-CC-------------------------------------ceEE
Q 023864 173 FIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GS-------------------------------------SMLY 213 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS-------------------------------------~~L~ 213 (276)
.++|.+|++++.+++.+ .++|..+++||+++|+++ .+ +.|.
T Consensus 178 tvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999999999999984 789999999999999988 34 2489
Q ss_pred EEcCCC--CcE-EEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCc
Q 023864 214 QIDPQT--LKV-IRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 214 viDp~t--~~v-i~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T~~ 268 (276)
+||+++ .++ +++|.|+... .-+.+. || ++||+...+ |.|.+||.++.+
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~P------hGv~~sPDGk~v~V~~~~s-~~VsVid~~~~~ 310 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNP------HGCNMAPDKKHLCVAGKLS-PTVTVLDVTRFD 310 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSC------CCEEECTTSSEEEEECTTS-SBEEEEEGGGHH
T ss_pred EEeCcccCCceeEEEEecCCCc------eEEEEcCCCCEEEEeCCCC-CeEEEEECcccc
Confidence 999998 667 8899998522 222233 55 699999999 999999999753
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.27 E-value=5.3e-10 Score=99.12 Aligned_cols=170 Identities=15% Similarity=0.082 Sum_probs=116.2
Q ss_pred eEEEEEEecCC--------CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCC-CCcEEEE--eecCCCceEEEEEEe--C
Q 023864 93 IQVVNEFPHDP--------RAFTQGLLYAENDTLFESTGLYGRSSVRRVALE-TGKVEAI--NQMEGSYFGEGLTLL--G 159 (276)
Q Consensus 93 ~~Vv~~~Phd~--------~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~-tgkv~~~--~~l~~~~FgEGit~~--g 159 (276)
.+.+..+++.. .....++.|+|||+||.+.. +.+.|++||++ +|++... ..++......++++. +
T Consensus 121 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 121 LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL--GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET--TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC--CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC
Confidence 34566666532 23466899999999887644 78899999998 6765433 234433334566765 4
Q ss_pred CEEEEEEeeCCEEEEEeCCC--Cc--EEEEEecC--------CCCeeEEeeCCCEEEEEC-CCceEEEEcCC---CCcEE
Q 023864 160 EKLFQVTWLQKTGFIYDQNN--LN--KLEEFTHQ--------MKDGWGLATDGKVLFGSD-GSSMLYQIDPQ---TLKVI 223 (276)
Q Consensus 160 ~~LyqlTwk~~~v~V~D~~t--lk--~i~~~~~~--------~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~---t~~vi 223 (276)
+.||+....++.+.+||.+. .+ .+..+... .+.+..+++||++||+++ +.+.|.++|.+ +++.+
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~ 278 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLI 278 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 57999999999999988653 33 34455432 022366889999999988 68999999976 44555
Q ss_pred EEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEE--eCCCCcEE
Q 023864 224 RKDIVRYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYA--YLQAFGSS 270 (276)
Q Consensus 224 ~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vI--Dp~T~~v~ 270 (276)
..+.+. +. .+..+.+. || +||+....+ +.|.++ |++||+..
T Consensus 279 ~~~~~~--~~---~~~~~~~spdg~~l~v~~~~~-~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 279 QQISTE--GD---FPRDFDLDPTEAFVVVVNQNT-DNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEECS--SS---CCCEEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEE
T ss_pred EEEecC--CC---CcCeEEECCCCCEEEEEEcCC-CcEEEEEEeCCCCeEE
Confidence 555542 11 24455665 55 699999888 887777 99998754
No 45
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.26 E-value=2e-10 Score=97.82 Aligned_cols=154 Identities=10% Similarity=0.116 Sum_probs=111.8
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCcE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNK 182 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk~ 182 (276)
.....|++++++|+||.++. ...|.+||++++.. .....+......|++++ +++||+.+..++.++++|..+.+.
T Consensus 66 ~~~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 66 LYQPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp CCSCCCEEECTTCCEEEEET---TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred cCCcceeEECCCCCEEEEcC---CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 34567999999999998764 56899999987654 33333333457789987 578999999999999999877665
Q ss_pred EEEEec--CCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCe
Q 023864 183 LEEFTH--QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPC 258 (276)
Q Consensus 183 i~~~~~--~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~ 258 (276)
...... ..+.|..+.+||+ ||++| +.+.|+++|+++.+..... ..+ ...++.|.+. +|.||+..+.. +.
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~---~~~--~~~p~~i~~d~~g~l~v~~~~~-~~ 214 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVLP---FTD--ITAPWGIAVDEAGTVYVTEHNT-NQ 214 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEECC---CSS--CCSEEEEEECTTCCEEEEETTT-SC
T ss_pred EeeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEeec---ccC--CCCceEEEECCCCCEEEEECCC-Cc
Confidence 432211 1345666677776 99988 5789999999987654321 111 1355666665 57999999999 99
Q ss_pred EEEEeCCCCc
Q 023864 259 IPYAYLQAFG 268 (276)
Q Consensus 259 I~vIDp~T~~ 268 (276)
|.++|+++..
T Consensus 215 v~~~~~~~~~ 224 (270)
T 1rwi_B 215 VVKLLAGSTT 224 (270)
T ss_dssp EEEECTTCSC
T ss_pred EEEEcCCCCc
Confidence 9999998754
No 46
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.25 E-value=7.2e-10 Score=102.35 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=113.3
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~tl 180 (276)
....||+++. ++.||.+.. +...|.++|++........ -..-..+.||+++ ++.||...|.+ +++.++|.+.-
T Consensus 116 ~~p~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SCCCEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCccEEEEecCCCeEEEEcC--CCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 3457999996 578998865 7789999999865322211 1223456789998 68999999999 99999998753
Q ss_pred cEEEEEe--cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCC
Q 023864 181 NKLEEFT--HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWP 257 (276)
Q Consensus 181 k~i~~~~--~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d 257 (276)
....-+. ...|.|.+++++++.||++| +.++|+.+|++... .+.+.... ..+++-|.+.+|.||+..|.. +
T Consensus 193 ~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~~~----~~~P~giav~~~~ly~td~~~-~ 266 (349)
T 3v64_C 193 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQG----LPHPFAITVFEDSLYWTDWHT-K 266 (349)
T ss_dssp SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS----CSSEEEEEEETTEEEEEETTT-T
T ss_pred CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEeCC----CCCceEEEEECCEEEEecCCC-C
Confidence 3221112 22357777888899999999 78999999987532 22222111 346677888899999999999 9
Q ss_pred eEEEEeCCCCc
Q 023864 258 CIPYAYLQAFG 268 (276)
Q Consensus 258 ~I~vIDp~T~~ 268 (276)
.|.++|+.+|+
T Consensus 267 ~V~~~~~~~G~ 277 (349)
T 3v64_C 267 SINSANKFTGK 277 (349)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEEccCCC
Confidence 99999988866
No 47
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.25 E-value=1.5e-09 Score=98.45 Aligned_cols=157 Identities=11% Similarity=0.025 Sum_probs=113.0
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~tl 180 (276)
....||+++. ++.||.+.. +...|.++|++......... .....+.|++++ +++||...|.+ +++.++|++.-
T Consensus 77 ~~p~glavd~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~ 153 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (316)
T ss_dssp SCCCEEEEETTTTEEEEEET--TTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcCEEEEeecCCeEEEEEC--CCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC
Confidence 3457999985 578998755 78899999998654332222 122356799997 68999999986 89999998643
Q ss_pred cEEEEE---ecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCC
Q 023864 181 NKLEEF---THQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVW 256 (276)
Q Consensus 181 k~i~~~---~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~ 256 (276)
. ...+ ....|.|.++.+++++||++| +.++|+.+|.+... .+.+.-. +....++.-|...+|+||+..|..
T Consensus 154 ~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~--~~~~~~P~giav~~~~ly~~d~~~- 228 (316)
T 1ijq_A 154 D-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILED--EKRLAHPFSLAVFEDKVFWTDIIN- 228 (316)
T ss_dssp C-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEEC--TTTTSSEEEEEEETTEEEEEETTT-
T ss_pred C-eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeec--CCccCCcEEEEEECCEEEEEECCC-
Confidence 2 2222 222457777888899999999 68899999987532 2222211 112235566778899999999999
Q ss_pred CeEEEEeCCCCcE
Q 023864 257 PCIPYAYLQAFGS 269 (276)
Q Consensus 257 d~I~vIDp~T~~v 269 (276)
+.|.++|+.+|+.
T Consensus 229 ~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 229 EAIFSANRLTGSD 241 (316)
T ss_dssp TEEEEEETTTCCC
T ss_pred CeEEEEeCCCCcc
Confidence 9999999998763
No 48
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.24 E-value=3e-09 Score=94.89 Aligned_cols=171 Identities=12% Similarity=0.079 Sum_probs=119.6
Q ss_pred CceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEE
Q 023864 88 PSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVT 166 (276)
Q Consensus 88 ~~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlT 166 (276)
+...+.+++.++|. ..+.+|++++++|+||.+.- ....|.++|+++ ++.....++.. +.|++++ +++||+++
T Consensus 17 ~~~~~~~~~~~~p~--~~~pegia~~~~g~lyv~d~--~~~~I~~~d~~g-~~~~~~~~~~~--p~gia~~~dG~l~vad 89 (306)
T 2p4o_A 17 IELAPAKIITSFPV--NTFLENLASAPDGTIFVTNH--EVGEIVSITPDG-NQQIHATVEGK--VSGLAFTSNGDLVATG 89 (306)
T ss_dssp BCCCCEEEEEEECT--TCCEEEEEECTTSCEEEEET--TTTEEEEECTTC-CEEEEEECSSE--EEEEEECTTSCEEEEE
T ss_pred CcCCCceEeEeCCC--CCCcceEEECCCCCEEEEeC--CCCeEEEECCCC-ceEEEEeCCCC--ceeEEEcCCCcEEEEe
Confidence 33457899999997 47889999999999999854 678899999986 45555566654 6688886 46899999
Q ss_pred eeCC--EEEEEeCCCCcEEEEEecC-CCCeeEEe-eCCCEEEEEC-CCceEEEEcCCCCcEEEEEEee-----eCCEeee
Q 023864 167 WLQK--TGFIYDQNNLNKLEEFTHQ-MKDGWGLA-TDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVR-----YKGREVR 236 (276)
Q Consensus 167 wk~~--~v~V~D~~tlk~i~~~~~~-~~EGWGLT-~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~-----~~g~pv~ 236 (276)
+..+ .++.+|..+.+...-...+ ....-|++ .++..+|++| +..+|+++|+.+.+..-...-. ..-..+.
T Consensus 90 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 90 WNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp ECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred ccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 8754 5889998887654333322 11122333 3566899999 6899999999875321110000 1011344
Q ss_pred eeeeeEEECCEEEEEeCCCCCeEEEEeCCC
Q 023864 237 NLNELEFIKGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 237 ~lNELE~idG~lyANvw~s~d~I~vIDp~T 266 (276)
..|-|...+++||++.... ++|.++|++.
T Consensus 170 ~pngis~dg~~lyv~d~~~-~~I~~~~~~~ 198 (306)
T 2p4o_A 170 AANGLKRFGNFLYVSNTEK-MLLLRIPVDS 198 (306)
T ss_dssp SEEEEEEETTEEEEEETTT-TEEEEEEBCT
T ss_pred cCCCcCcCCCEEEEEeCCC-CEEEEEEeCC
Confidence 6777745556899999999 9999999875
No 49
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.24 E-value=9.6e-10 Score=102.84 Aligned_cols=155 Identities=10% Similarity=0.094 Sum_probs=113.4
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~tl 180 (276)
....||++++ ++.||.+.. +...|.+++++......... ..-..+.||+++ ++.||...|.+ +++.++|++..
T Consensus 159 ~~p~glavd~~~g~lY~~d~--~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 159 ESPGGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SCCCCEEEETTTTEEEEEET--TTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCccEEEEEeCCCeEEEEcC--CCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 3457999996 478998755 77899999998654222221 222456788988 68999999999 99999998754
Q ss_pred cEEEEEec--CCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCC
Q 023864 181 NKLEEFTH--QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWP 257 (276)
Q Consensus 181 k~i~~~~~--~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d 257 (276)
....-+.. ..|.|.++.++++.||++| +.++|+.+|.+... .+.+.... ..++.-|.+.+|.||+..|.. +
T Consensus 236 ~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~----~~~P~giav~~~~ly~td~~~-~ 309 (386)
T 3v65_B 236 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVISQG----LPHPFAITVFEDSLYWTDWHT-K 309 (386)
T ss_dssp SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-CEEEECSS----CSSEEEEEEETTEEEEEETTT-T
T ss_pred CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-eEEEEECC----CCCceEEEEECCEEEEeeCCC-C
Confidence 33222222 2357777888899999999 68999999987532 22232221 345667888899999999999 9
Q ss_pred eEEEEeCCCCc
Q 023864 258 CIPYAYLQAFG 268 (276)
Q Consensus 258 ~I~vIDp~T~~ 268 (276)
.|.++|+.+|+
T Consensus 310 ~V~~~~~~~G~ 320 (386)
T 3v65_B 310 SINSANKFTGK 320 (386)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCc
Confidence 99999987765
No 50
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.24 E-value=1.4e-09 Score=92.92 Aligned_cols=152 Identities=12% Similarity=0.091 Sum_probs=109.0
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCC
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tl 180 (276)
......+++++++|+||.++. +...|.++|+ ++++... .++ ......+++++ ++++|+.++.++.++++|+ +.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~--~~~~i~~~d~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 171 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEM--NGNRIGRITD-DGKIREY-ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SG 171 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEET--TTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC
T ss_pred cCCCceeeEECCCCCEEEEec--CCceEEEECC-CCCEEEe-cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CC
Confidence 345678999999999998765 5789999999 7776533 333 34567899998 4699999999999999999 66
Q ss_pred cEEEEEecC--CCCeeEE--eeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCC
Q 023864 181 NKLEEFTHQ--MKDGWGL--ATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (276)
Q Consensus 181 k~i~~~~~~--~~EGWGL--T~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~ 254 (276)
+... +..+ .....++ .+||+ ||+++ +.+.|+++|+ +.++.. +.... ....+..|.+. +|.||+..+.
T Consensus 172 ~~~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~~~~---~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 172 DITE-FKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITE-FKIPT---PNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp CEEE-EECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEE-EECSS---TTCCEEEEEECSTTCEEEEETT
T ss_pred cEEE-eeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEEE-EECCC---CCCCceeEEECCCCCEEEeccC
Confidence 5543 4322 2233444 45555 88877 6889999999 777543 33321 12345566665 6899999998
Q ss_pred CCCeEEEEeCCCCc
Q 023864 255 VWPCIPYAYLQAFG 268 (276)
Q Consensus 255 s~d~I~vIDp~T~~ 268 (276)
. +.|.++|+ +++
T Consensus 245 ~-~~i~~~d~-~g~ 256 (299)
T 2z2n_A 245 A-NKIGRLTS-NNI 256 (299)
T ss_dssp T-TEEEEEET-TTE
T ss_pred C-ceEEEECC-CCc
Confidence 8 99999999 444
No 51
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.22 E-value=1.8e-09 Score=97.82 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=121.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
.....++.+++++++|.+++ .+..|++||+++++.+...... .....++++. ++.+|+....++.+.+||..+.+
T Consensus 169 ~~~v~~~~~~~~~~~~~s~~--~d~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 169 LGFVETISIPEHNELWVSQM--QANAVHVFDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp CCEEEEEEEGGGTEEEEEEG--GGTEEEEEETTTCCEEEEEECS-SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CCceeEEEEcCCCEEEEEEC--CCCEEEEEECCCceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc
Confidence 44667899998899998877 7789999999999988877632 3345566775 56899999999999999999999
Q ss_pred EEEEEecC-CCCeeEEeeCCCEEEEEC--------CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEE
Q 023864 182 KLEEFTHQ-MKDGWGLATDGKVLFGSD--------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWA 250 (276)
Q Consensus 182 ~i~~~~~~-~~EGWGLT~Dg~~L~vSD--------GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyA 250 (276)
.+.+++.. ...+..+++||+.|++++ +...|+++|+.+.+++..+.... .+..+.+. +| ++|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 246 EIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG------NKRHIVSGNTENKIYV 319 (433)
T ss_dssp EEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE------CEEEEEECSSTTEEEE
T ss_pred EEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC------CcceEEECCCCCEEEE
Confidence 98888754 123444678999999876 35689999999998887775443 33345554 45 7999
Q ss_pred EeCCCCCeEEEEeCCCCcEE
Q 023864 251 NVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 251 Nvw~s~d~I~vIDp~T~~v~ 270 (276)
..... +.|.++|+++++.+
T Consensus 320 ~~~~~-~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 320 SDMCC-SKIEVYDLKEKKVQ 338 (433)
T ss_dssp EETTT-TEEEEEETTTTEEE
T ss_pred EecCC-CEEEEEECCCCcEE
Confidence 99888 99999999996543
No 52
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.21 E-value=1.4e-09 Score=94.39 Aligned_cols=154 Identities=14% Similarity=0.032 Sum_probs=111.1
Q ss_pred CceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCcE
Q 023864 106 FTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNK 182 (276)
Q Consensus 106 FTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk~ 182 (276)
...|++++++ ++||.+.. +...|.++|++++++...... ....+.|++++ +++||+.++.++++.++|.+....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEEEecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 3469999985 78998754 888999999987765333221 22467899997 589999999999999999875432
Q ss_pred EEEEec--CCCCeeEEeeCCCEEEEEC-C--CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEEeCCC
Q 023864 183 LEEFTH--QMKDGWGLATDGKVLFGSD-G--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQV 255 (276)
Q Consensus 183 i~~~~~--~~~EGWGLT~Dg~~L~vSD-G--S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyANvw~s 255 (276)
..-++. ..|.|..+.++++.||++| + .++|+.+|++. +..+.+. .. .+..+|.|.+. +++||+..+..
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~-~~---~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILA-QD---NLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEE-CT---TCSCEEEEEEETTTTEEEEEETTT
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEE-EC---CCCCCcEEEEcCCCCEEEEEECCC
Confidence 222222 2356666778899999999 4 47999988764 2222221 11 23467888887 46899999999
Q ss_pred CCeEEEEeCCCCc
Q 023864 256 WPCIPYAYLQAFG 268 (276)
Q Consensus 256 ~d~I~vIDp~T~~ 268 (276)
+.|.++|+++..
T Consensus 189 -~~I~~~~~~g~~ 200 (267)
T 1npe_A 189 -HRAECLNPAQPG 200 (267)
T ss_dssp -TEEEEEETTEEE
T ss_pred -CEEEEEecCCCc
Confidence 999999998643
No 53
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.21 E-value=9.4e-10 Score=103.67 Aligned_cols=158 Identities=12% Similarity=0.125 Sum_probs=114.9
Q ss_pred CceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCC-EEEEEeCCCCcEEE
Q 023864 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK-TGFIYDQNNLNKLE 184 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~-~v~V~D~~tlk~i~ 184 (276)
...||+++++|+||.+.. +...|++||++++++.........+. ..+...++.||...+..+ .++++|+++.....
T Consensus 132 ~P~~la~d~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 467999999999999865 78899999999998876655544443 333334678999999776 99999998765544
Q ss_pred EE----e--cCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeee-eeeEEE--CCEEEEEeCCC
Q 023864 185 EF----T--HQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNL-NELEFI--KGEVWANVWQV 255 (276)
Q Consensus 185 ~~----~--~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~l-NELE~i--dG~lyANvw~s 255 (276)
.+ . ...+.+..+++++..||++|...+|+.+|+++.+....-.....+..-.++ |.|.+. +|+||+.....
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 44 2 124567778887889999999889999999988643221112222211121 278887 58999999999
Q ss_pred CCeEEEEeCCCC
Q 023864 256 WPCIPYAYLQAF 267 (276)
Q Consensus 256 ~d~I~vIDp~T~ 267 (276)
++|.++|+...
T Consensus 289 -~~I~~~~~~g~ 299 (409)
T 3hrp_A 289 -SSVYKITPDGE 299 (409)
T ss_dssp -TEEEEECTTCC
T ss_pred -CEEEEEecCCC
Confidence 99999998763
No 54
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.21 E-value=4.9e-09 Score=90.58 Aligned_cols=162 Identities=12% Similarity=0.076 Sum_probs=115.3
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEeC-CEEEEEEeeCCE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG-EKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~g-~~LyqlTwk~~~ 171 (276)
+++.++.........|++++++|+||.+.. +...|.+||.+ |+........ ....+.||+++. +++|+.+..++.
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVEC--KVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEEC--CCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 345566554445678999999999998765 67899999975 6666655433 234577999985 799999999999
Q ss_pred EEEEeCCCCcEEEEEecC----CCCeeEEeeCCCEEEEEC-CCc-eEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-
Q 023864 172 GFIYDQNNLNKLEEFTHQ----MKDGWGLATDGKVLFGSD-GSS-MLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI- 244 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~----~~EGWGLT~Dg~~L~vSD-GS~-~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i- 244 (276)
+.+||++ .+.+.++... .+.|..+++|| .||+++ +.+ .|.++|++ .+.++.+...... ..+..+.+.
T Consensus 187 i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~---~~~~~i~~~~ 260 (286)
T 1q7f_A 187 VKVFNYE-GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD-GQLISALESKVKH---AQCFDVALMD 260 (286)
T ss_dssp EEEEETT-CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT-SCEEEEEEESSCC---SCEEEEEEET
T ss_pred EEEEcCC-CCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC-CCEEEEEcccCCC---CcceeEEECC
Confidence 9999984 4666777532 23444455666 688888 555 99999965 6777777664321 134455565
Q ss_pred CCEEEEEeCCCCCeEEEEeCCC
Q 023864 245 KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 245 dG~lyANvw~s~d~I~vIDp~T 266 (276)
+|+||+..+ . ++|.+++...
T Consensus 261 ~g~l~vs~~-~-~~v~v~~~~~ 280 (286)
T 1q7f_A 261 DGSVVLASK-D-YRLYIYRYVQ 280 (286)
T ss_dssp TTEEEEEET-T-TEEEEEECSC
T ss_pred CCcEEEECC-C-CeEEEEEccc
Confidence 789999874 6 8999999866
No 55
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=2.4e-09 Score=97.04 Aligned_cols=164 Identities=13% Similarity=0.041 Sum_probs=122.1
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCC--CeEEEEeCCCCcEEEEeecC--------CCceEEEEEEeC-C
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGR--SSVRRVALETGKVEAINQME--------GSYFGEGLTLLG-E 160 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~--S~I~~iDl~tgkv~~~~~l~--------~~~FgEGit~~g-~ 160 (276)
..++|+++. .+..|+++++||++|.+.-.++. .+|.++| +|++. ++| .-....|++++. +
T Consensus 8 ~~~~v~~~~----~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~---~~p~~~~~~~~~~~~p~gv~~d~~g 78 (343)
T 2qe8_A 8 RLEVVAELS----LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLI---PFPPQSGNAIITFDTVLGIKSDGNG 78 (343)
T ss_dssp CCEEEEEES----SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEE---ESCCCCSSCCCCCSCEEEEEECSSS
T ss_pred eeEEEEEcC----CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCee---cCCCcccCcccceeEeeEEEEcCCC
Confidence 568888877 56789999999999988544433 4788888 77754 222 124677999985 8
Q ss_pred EEEEEEee-----CCEEEEEeCCCCcEEEEEecC--------CCCeeEEeeCCCEEEEECC----CceEEEEcCCCCcEE
Q 023864 161 KLFQVTWL-----QKTGFIYDQNNLNKLEEFTHQ--------MKDGWGLATDGKVLFGSDG----SSMLYQIDPQTLKVI 223 (276)
Q Consensus 161 ~LyqlTwk-----~~~v~V~D~~tlk~i~~~~~~--------~~EGWGLT~Dg~~L~vSDG----S~~L~viDp~t~~vi 223 (276)
+||++... .+++.+||+++.++++++..+ ...+..+.+++..+|++|. ...|.++|+++.+..
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~ 158 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA 158 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE
Confidence 99999987 689999999999999888753 1245556667889999983 679999999999887
Q ss_pred EEEEe-----------eeCCEee-------------eeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCC
Q 023864 224 RKDIV-----------RYKGREV-------------RNLNELEFI-KG-EVWANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 224 ~~I~V-----------~~~g~pv-------------~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~ 265 (276)
+.+.- ..+|..+ ..+|.|.+. || .||+..+.. +.|.+||+.
T Consensus 159 r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~-~~l~~~~~~ 225 (343)
T 2qe8_A 159 RVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS-TSMYRIKSA 225 (343)
T ss_dssp EECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC-SEEEEEEHH
T ss_pred EEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC-CeEEEEEHH
Confidence 65521 1234332 246878876 45 699999888 899999863
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.19 E-value=4.7e-09 Score=89.68 Aligned_cols=153 Identities=10% Similarity=-0.021 Sum_probs=110.1
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
.....++.++++|.||.++. +...|.++|++ |++. ...++ ......+++++ +++||+.+..++.++++|++ .+
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTEN--GANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp TCCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred CCcceeEEECCCCCEEEEec--CCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 35678999999999998765 67889999998 8763 44444 23457788887 57999999999999999998 44
Q ss_pred EEEEEecC--CCCeeEE--eeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCC
Q 023864 182 KLEEFTHQ--MKDGWGL--ATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQV 255 (276)
Q Consensus 182 ~i~~~~~~--~~EGWGL--T~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s 255 (276)
.. ++..+ .....++ .+||+ ||+++ +.+.|+.+|+ +.+... +..... ...++.+.+. +|.||+..+..
T Consensus 136 ~~-~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~---~~~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 136 IY-EYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLEE-YPLPTN---AAAPVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp EE-EEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEE-EECSST---TCCEEEEEECTTSSEEEEETTT
T ss_pred EE-EccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEEE-eeCCCC---CCCcceEEECCCCCEEEEccCC
Confidence 43 44332 2234444 45666 88887 5889999999 666553 333221 1245556665 68999999888
Q ss_pred CCeEEEEeCCCCcEE
Q 023864 256 WPCIPYAYLQAFGSS 270 (276)
Q Consensus 256 ~d~I~vIDp~T~~v~ 270 (276)
+.|.++|+ +++..
T Consensus 209 -~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 209 -NKIGRITT-TGEIS 221 (300)
T ss_dssp -TEEEEECT-TCCEE
T ss_pred -CEEEEEcC-CCcEE
Confidence 99999999 55543
No 57
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=1.9e-09 Score=96.33 Aligned_cols=155 Identities=8% Similarity=0.059 Sum_probs=106.3
Q ss_pred ceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCC------c-EE-----EEeecCCCceEEEEEEe--CCEEEEEEeeCCE
Q 023864 107 TQGLLYAENDT-LFESTGLYGRSSVRRVALETG------K-VE-----AINQMEGSYFGEGLTLL--GEKLFQVTWLQKT 171 (276)
Q Consensus 107 TQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tg------k-v~-----~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~ 171 (276)
..++.|+|||+ ||.+.. +.+.|++|+++.. + +. ....++......++++. ++.||+.+..++.
T Consensus 157 ~~~~~~spdg~~l~~~~~--~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDL--GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp EEEEEECTTSSEEEEEET--TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred ceEEEECCCCCEEEEEeC--CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 36799999986 887543 7889999977643 3 22 23344443344567775 4589999999999
Q ss_pred EEEEeCCCCc--EEEEEecCC-----CCeeEEeeCCCEEEEEC-C-CceEEEEcC--CCCc--EEEEEEeeeCCEeeeee
Q 023864 172 GFIYDQNNLN--KLEEFTHQM-----KDGWGLATDGKVLFGSD-G-SSMLYQIDP--QTLK--VIRKDIVRYKGREVRNL 238 (276)
Q Consensus 172 v~V~D~~tlk--~i~~~~~~~-----~EGWGLT~Dg~~L~vSD-G-S~~L~viDp--~t~~--vi~~I~V~~~g~pv~~l 238 (276)
+.+||.++.+ .+.++.... +.+..+++||++||+++ + .+.|.++|. ++.+ .+..+..+ . .+
T Consensus 235 v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g---~---~~ 308 (361)
T 3scy_A 235 VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTG---I---HP 308 (361)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECS---S---CC
T ss_pred EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCC---C---CC
Confidence 9999987554 355555321 12666889999999988 5 678888654 5555 44455542 1 34
Q ss_pred eeeEEE-CC-EEEEEeCCCCCeEEE--EeCCCCcEE
Q 023864 239 NELEFI-KG-EVWANVWQVWPCIPY--AYLQAFGSS 270 (276)
Q Consensus 239 NELE~i-dG-~lyANvw~s~d~I~v--IDp~T~~v~ 270 (276)
..+.+. || +||+....+ +.|.+ +|+++|+..
T Consensus 309 ~~~~~spdg~~l~~~~~~~-~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 309 RNFIITPNGKYLLVACRDT-NVIQIFERDQATGLLT 343 (361)
T ss_dssp CEEEECTTSCEEEEEETTT-TEEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEECCC-CCEEEEEEECCCCcEe
Confidence 456665 55 599998888 88888 899998754
No 58
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.18 E-value=1.6e-09 Score=95.94 Aligned_cols=168 Identities=11% Similarity=0.071 Sum_probs=111.6
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEee---cCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ---MEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~---l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
+.+....+... ..+++|+|||+||.++..-+...|..||+++|+...... .+..+.+..+..+++.||+..+.++
T Consensus 31 ~~~~~~~~~~~--p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~ 108 (347)
T 3hfq_A 31 TNDGLLAATQN--PTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKG 108 (347)
T ss_dssp EEEEEEEECSC--CCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTT
T ss_pred EEeeeeeccCC--cceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCC
Confidence 44455555433 358999999998876532246889999998887433222 2344443333444678999999999
Q ss_pred EEEEEeCC---CCcEEEEEecCC-----------CCeeEEeeCCCEEEEEC-CCceEEEEcCC-CCcEEEEEEeee-CCE
Q 023864 171 TGFIYDQN---NLNKLEEFTHQM-----------KDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKVIRKDIVRY-KGR 233 (276)
Q Consensus 171 ~v~V~D~~---tlk~i~~~~~~~-----------~EGWGLT~Dg~~L~vSD-GS~~L~viDp~-t~~vi~~I~V~~-~g~ 233 (276)
.+.+||.+ +++.+.++.... +.+..+++||+ ||+++ +.++|+++|.+ +.++........ .|.
T Consensus 109 ~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~ 187 (347)
T 3hfq_A 109 TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGF 187 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTC
T ss_pred EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCC
Confidence 99999986 566677765431 12367889999 99988 68899999988 565443222211 121
Q ss_pred eeeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCC--CCc
Q 023864 234 EVRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQ--AFG 268 (276)
Q Consensus 234 pv~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~--T~~ 268 (276)
.++.+.+. || +||+..... +.|.++|.+ +++
T Consensus 188 ---~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 188 ---GPRHLVFSPDGQYAFLAGELS-SQIASLKYDTQTGA 222 (347)
T ss_dssp ---CEEEEEECTTSSEEEEEETTT-TEEEEEEEETTTTE
T ss_pred ---CCceEEECCCCCEEEEEeCCC-CEEEEEEecCCCCc
Confidence 23446665 56 599988778 888887765 454
No 59
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.16 E-value=3.9e-09 Score=91.19 Aligned_cols=152 Identities=10% Similarity=0.106 Sum_probs=111.2
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-----CCceEEEEEEe--CCEEEEEEee-CCEEEEEe
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-----GSYFGEGLTLL--GEKLFQVTWL-QKTGFIYD 176 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-----~~~FgEGit~~--g~~LyqlTwk-~~~v~V~D 176 (276)
....+++++++|+||.+.. +...|.+||++ ++........ ......++++. +++||+.+.. ++.+.+||
T Consensus 30 ~~p~~v~~~~~g~l~v~~~--~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADT--NNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp SCEEEEEECTTCCEEEEEG--GGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CCCceEEECCCCCEEEEEC--CCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 4567999999999998755 67899999998 6665555321 12357899994 6899999986 89999999
Q ss_pred CCCCcEEEEEecC---CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEE
Q 023864 177 QNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWAN 251 (276)
Q Consensus 177 ~~tlk~i~~~~~~---~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyAN 251 (276)
.+.+.+.++..+ .+.+..+.+||+ ||++| +.+.|+++|++ .+.+..+.... ....++-+.+. +|+||+.
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~---~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGCSK---HLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEECTT---TCSSEEEEEECSSSEEEEE
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCCCC---ccCCcEEEEECCCCCEEEE
Confidence 567777777543 234444566775 88888 67899999975 55655554321 12345666666 6899999
Q ss_pred eCCCCCeEEEEeCCC
Q 023864 252 VWQVWPCIPYAYLQA 266 (276)
Q Consensus 252 vw~s~d~I~vIDp~T 266 (276)
.+.. +.|.++|+..
T Consensus 181 ~~~~-~~i~~~~~~g 194 (286)
T 1q7f_A 181 DNRA-HCVKVFNYEG 194 (286)
T ss_dssp EGGG-TEEEEEETTC
T ss_pred ECCC-CEEEEEcCCC
Confidence 9888 9999999854
No 60
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.16 E-value=7.8e-10 Score=108.31 Aligned_cols=133 Identities=10% Similarity=0.007 Sum_probs=97.8
Q ss_pred EEEEEEecCC-----CCC-------ceEEEEe--cCC-EEEEEcCCCCCCeEEEEeCCCC----cEEEEee---c----C
Q 023864 94 QVVNEFPHDP-----RAF-------TQGLLYA--END-TLFESTGLYGRSSVRRVALETG----KVEAINQ---M----E 147 (276)
Q Consensus 94 ~Vv~~~Phd~-----~aF-------TQGL~~~--~dg-~LyeStG~yg~S~I~~iDl~tg----kv~~~~~---l----~ 147 (276)
+||.+.|... +-| ..|+.++ .++ +||.++. +++.|+++|.++. ++.+.++ + +
T Consensus 59 ~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l--~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g 136 (462)
T 2ece_A 59 KIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGL--RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG 136 (462)
T ss_dssp SEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBT--TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC
T ss_pred eEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccC--CCCeEEEEECCCCCCCceeeeeechhhcccccC
Confidence 5788777532 112 1144445 554 5888655 8999999999876 7777662 2 3
Q ss_pred CCceEEEEEEeCCEEEEEEeeC------CEEEEEeCCCCcEEEEEecC-CCCeeE----EeeCCCEEEEEC-C-------
Q 023864 148 GSYFGEGLTLLGEKLFQVTWLQ------KTGFIYDQNNLNKLEEFTHQ-MKDGWG----LATDGKVLFGSD-G------- 208 (276)
Q Consensus 148 ~~~FgEGit~~g~~LyqlTwk~------~~v~V~D~~tlk~i~~~~~~-~~EGWG----LT~Dg~~L~vSD-G------- 208 (276)
. -.+-++....+.||+.+-.+ +.++++|.+|++++++++.+ .+++.+ +.+|++.+|+|| |
T Consensus 137 ~-s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 137 Y-SRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp E-EEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred C-CcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 1 14556666655588877776 79999999999999999854 334333 489999999998 3
Q ss_pred -----------CceEEEEcCCCCcEEEEEEee
Q 023864 209 -----------SSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 209 -----------S~~L~viDp~t~~vi~~I~V~ 229 (276)
.++|+++|.++.+++++|.++
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 899999999999999999996
No 61
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.16 E-value=5.4e-09 Score=90.47 Aligned_cols=169 Identities=9% Similarity=0.004 Sum_probs=115.2
Q ss_pred EEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCC-CcEEE----EeecCCCceEEEEEEe--CCEEEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALET-GKVEA----INQMEGSYFGEGLTLL--GEKLFQV 165 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~t-gkv~~----~~~l~~~~FgEGit~~--g~~Lyql 165 (276)
+++..++... ...++.|++||+ ||.+.. ++..|.+||+++ +++.. ....+......++++. ++.||+.
T Consensus 120 ~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 120 GVVDVVEGLD--GCHSANISPDNRTLWVPAL--KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp EEEEEECCCT--TBCCCEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred cccccccCCC--CceEEEECCCCCEEEEecC--CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEE
Confidence 4566666533 457999999975 877653 678899999998 87643 2334433345567775 4579999
Q ss_pred EeeCCEEEEEeCCC--C--cEEEEEecCCCC---------eeEEeeCCCEEEEEC-CCceEEEEcCC----CCcEEEEEE
Q 023864 166 TWLQKTGFIYDQNN--L--NKLEEFTHQMKD---------GWGLATDGKVLFGSD-GSSMLYQIDPQ----TLKVIRKDI 227 (276)
Q Consensus 166 Twk~~~v~V~D~~t--l--k~i~~~~~~~~E---------GWGLT~Dg~~L~vSD-GS~~L~viDp~----t~~vi~~I~ 227 (276)
...++.+.+||.+. . +.+..+..- +. +..+++||+.||+++ +.+.|.++|.+ +++.+..+.
T Consensus 196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 196 NELNSSVDVWELKDPHGNIECVQTLDMM-PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECS-CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCcEEEEeecccc-CccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec
Confidence 99999999999843 3 334444421 22 366889999999988 68899999987 445555555
Q ss_pred eeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEE--eCCCCc-EEEEEE
Q 023864 228 VRYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYA--YLQAFG-SSLVYV 274 (276)
Q Consensus 228 V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vI--Dp~T~~-v~l~~~ 274 (276)
... .+..+.+. || +||+....+ +.|.+. |+++|+ ..+..+
T Consensus 275 ~~~------~~~~~~~s~dg~~l~~~~~~~-~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 275 TET------QPRGFNVDHSGKYLIAAGQKS-HHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp CSS------SCCCEEECTTSSEEEEECTTT-CEEEEEEEETTTTEEEEEEEE
T ss_pred CCC------ccceEEECCCCCEEEEecCCC-CeEEEEEEcCCCceeeEcccc
Confidence 432 24456665 45 599998777 877776 888875 334443
No 62
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=1.5e-09 Score=106.23 Aligned_cols=176 Identities=14% Similarity=0.061 Sum_probs=120.2
Q ss_pred eeeEEEEEEecC--CCCCceEEEEecCCE-EEEEc---------CC-------CCCCeEEEEeCCCCcEEEEeecCC-Cc
Q 023864 91 YTIQVVNEFPHD--PRAFTQGLLYAENDT-LFEST---------GL-------YGRSSVRRVALETGKVEAINQMEG-SY 150 (276)
Q Consensus 91 ~t~~Vv~~~Phd--~~aFTQGL~~~~dg~-LyeSt---------G~-------yg~S~I~~iDl~tgkv~~~~~l~~-~~ 150 (276)
.+.+|+.+++.+ +..|-..+-|++++. +|.|. |. ...++|++||+++++++++++++. .-
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 457899999854 445655688899865 55542 00 136899999999999999999973 23
Q ss_pred eEEEEEE--e--CCEEEEEEe-----eCCEEEEEeCC--CCcEEEEEec--------------------CCCCeeEEeeC
Q 023864 151 FGEGLTL--L--GEKLFQVTW-----LQKTGFIYDQN--NLNKLEEFTH--------------------QMKDGWGLATD 199 (276)
Q Consensus 151 FgEGit~--~--g~~LyqlTw-----k~~~v~V~D~~--tlk~i~~~~~--------------------~~~EGWGLT~D 199 (276)
-+-++.+ + +..+|+++. .++.+++|..+ +++.++.+.. ..+.+..+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3345544 3 679999999 99999865433 3333333311 13567779999
Q ss_pred CCEEEEEC-CCceEEEEcC---CCCcEEEEEEeeeC--------CEee-eeeeeeEEE-CC-EEEEEeC-----------
Q 023864 200 GKVLFGSD-GSSMLYQIDP---QTLKVIRKDIVRYK--------GREV-RNLNELEFI-KG-EVWANVW----------- 253 (276)
Q Consensus 200 g~~L~vSD-GS~~L~viDp---~t~~vi~~I~V~~~--------g~pv-~~lNELE~i-dG-~lyANvw----------- 253 (276)
|++||+|| |.+.|.++|. .+.+++++|.++-. |.++ ..+..++.. || +|||.+-
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp 411 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYP 411 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHST
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccC
Confidence 99999999 8999999884 46789999999721 1111 134455564 44 7998772
Q ss_pred --CCCCeEEEE--eCCCC
Q 023864 254 --QVWPCIPYA--YLQAF 267 (276)
Q Consensus 254 --~s~d~I~vI--Dp~T~ 267 (276)
.. ..+.+| |+++|
T Consensus 412 ~~~~-~~~~~~~vd~~~G 428 (462)
T 2ece_A 412 EGLK-GWMVKLNANPSGG 428 (462)
T ss_dssp TCCC-CEEEEEEECTTSC
T ss_pred CCCc-eEEEEEEecCCCC
Confidence 23 467655 99997
No 63
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.15 E-value=4.1e-09 Score=91.24 Aligned_cols=164 Identities=10% Similarity=0.089 Sum_probs=115.8
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCC--CCcEE--EEeecCCCceEEEEEEe--CCEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE--TGKVE--AINQMEGSYFGEGLTLL--GEKLFQ 164 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~--tgkv~--~~~~l~~~~FgEGit~~--g~~Lyq 164 (276)
+.+.+..++|... ..++.|++||+ ||.+.. +...|..||++ +|++. .....+..+ .++++. ++.||+
T Consensus 27 ~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~ 100 (343)
T 1ri6_A 27 ALTLTQVVDVPGQ--VQPMVVSPDKRYLYVGVR--PEFRVLAYRIAPDDGALTFAAESALPGSL--THISTDHQGQFVFV 100 (343)
T ss_dssp CEEEEEEEECSSC--CCCEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEECSSCC--SEEEECTTSSEEEE
T ss_pred cEEEeeeEecCCC--CceEEECCCCCEEEEeec--CCCeEEEEEecCCCCceeeccccccCCCC--cEEEEcCCCCEEEE
Confidence 3456777887543 45999999986 776543 55899998887 77654 344444444 456654 568999
Q ss_pred EEeeCCEEEEEeC---CCCcEEEEEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCC-CcEEEEE--Eeee-CCEee
Q 023864 165 VTWLQKTGFIYDQ---NNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQT-LKVIRKD--IVRY-KGREV 235 (276)
Q Consensus 165 lTwk~~~v~V~D~---~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t-~~vi~~I--~V~~-~g~pv 235 (276)
....++.+.+||. .+.+.+..++.. .+.+..+++||+.||+++ +.+.|.++|.++ .++.... .... .+.
T Consensus 101 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-- 178 (343)
T 1ri6_A 101 GSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGA-- 178 (343)
T ss_dssp EETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTC--
T ss_pred EecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCC--
Confidence 9999999999999 556666666543 356677899999999998 889999999887 6654322 2221 121
Q ss_pred eeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCC
Q 023864 236 RNLNELEFI-KG-EVWANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 236 ~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~ 265 (276)
.++.+.+. +| +||+....+ +.|.++|..
T Consensus 179 -~~~~~~~~pdg~~l~~~~~~~-~~i~~~~~~ 208 (343)
T 1ri6_A 179 -GPRHMVFHPNEQYAYCVNELN-SSVDVWELK 208 (343)
T ss_dssp -CEEEEEECTTSSEEEEEETTT-TEEEEEESS
T ss_pred -CcceEEECCCCCEEEEEeCCC-CEEEEEEec
Confidence 34456665 45 599888888 999999984
No 64
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.15 E-value=9.1e-09 Score=96.93 Aligned_cols=159 Identities=12% Similarity=0.006 Sum_probs=114.5
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCC
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNN 179 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~t 179 (276)
-....||+++. ++.||.+.. +...|.++|++.......+. .....+.||+++ ++.||...|.+ +++.++|.+.
T Consensus 158 ~~~p~glavD~~~~~lY~~d~--~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEET--TTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CCCcccEEEEecCCceEEEEC--CCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 34568999997 588999865 77899999998765433332 122336788887 58999999974 8999999875
Q ss_pred CcEEEEEe--cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCC
Q 023864 180 LNKLEEFT--HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVW 256 (276)
Q Consensus 180 lk~i~~~~--~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~ 256 (276)
.....-+. ...|.|.++.+++++||++| +.++|+.+|.+.... +.+.... ..+.++.-|...+++||...|..
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~--~~l~~P~gl~v~~~~lywtd~~~- 310 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDE--KRLAHPFSLAVFEDKVFWTDIIN- 310 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECS--STTSSEEEEEEETTEEEEEESSS-
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCC--CCCCCCEEEEEeCCEEEEecCCC-
Confidence 44333232 22356777778899999999 689999999875433 3332221 12334556778899999999999
Q ss_pred CeEEEEeCCCCcE
Q 023864 257 PCIPYAYLQAFGS 269 (276)
Q Consensus 257 d~I~vIDp~T~~v 269 (276)
+.|.++|+.+|+.
T Consensus 311 ~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 311 EAIFSANRLTGSD 323 (400)
T ss_dssp CSEEEEESSSCCC
T ss_pred CeEEEEEcCCCCc
Confidence 9999999988753
No 65
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.15 E-value=1.1e-08 Score=87.33 Aligned_cols=162 Identities=10% Similarity=0.065 Sum_probs=112.8
Q ss_pred EEEEecC-CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEe-CCEEEEEEeeCCEE
Q 023864 96 VNEFPHD-PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL-GEKLFQVTWLQKTG 172 (276)
Q Consensus 96 v~~~Phd-~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~-g~~LyqlTwk~~~v 172 (276)
+.+++.. ......+|+++++|+||.++. +...|.++|++ +++.. ..++ ......+++++ ++++|+.+..++.+
T Consensus 5 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~--~~~~v~~~d~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 80 (299)
T 2z2n_A 5 LQELNLTNQDTGPYGITVSDKGKVWITQH--KANMISCINLD-GKITE-YPLPTPDAKVMCLTISSDGEVWFTENAANKI 80 (299)
T ss_dssp EEEEECCSSSCCEEEEEECTTSCEEEEET--TTTEEEEECTT-CCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred EEEEcCCCcCCCccceEECCCCCEEEEec--CCCcEEEEcCC-CCeEE-ecCCcccCceeeEEECCCCCEEEeCCCCCeE
Confidence 3444442 335678999999999998765 67899999999 77643 3333 33457788886 57999999999999
Q ss_pred EEEeCCCCcEEEEEecC--CCCeeEEeeC-CCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCE
Q 023864 173 FIYDQNNLNKLEEFTHQ--MKDGWGLATD-GKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGE 247 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~--~~EGWGLT~D-g~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~ 247 (276)
+++|++ .....+..+ .....+++.| ...||+++ +.+.|+.+|+ +.+... +..... ...++.|.+. +|.
T Consensus 81 ~~~~~~--g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~---~~~~~~i~~~~~g~ 153 (299)
T 2z2n_A 81 GRITKK--GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNK---GSYPSFITLGSDNA 153 (299)
T ss_dssp EEECTT--SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSST---TCCEEEEEECTTSC
T ss_pred EEECCC--CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCC---CCCCceEEEcCCCC
Confidence 999987 234455432 2234555543 23688876 6889999999 665542 222211 2245666666 689
Q ss_pred EEEEeCCCCCeEEEEeCCCCcEE
Q 023864 248 VWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 248 lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+|+..+.. +.|.++|+ +++..
T Consensus 154 l~v~~~~~-~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 154 LWFTENQN-NAIGRITE-SGDIT 174 (299)
T ss_dssp EEEEETTT-TEEEEECT-TCCEE
T ss_pred EEEEeCCC-CEEEEEcC-CCcEE
Confidence 99999888 99999999 76654
No 66
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.12 E-value=5.4e-09 Score=95.86 Aligned_cols=156 Identities=8% Similarity=0.042 Sum_probs=111.6
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEee-CCEEEEEeCCCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL-QKTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk-~~~v~V~D~~tl 180 (276)
....||+++. ++.||.+.. +...|.++|++........ -.....+.||+++ ++.||...|. .+++.++|++.-
T Consensus 79 ~~p~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 155 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDS--ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS 155 (318)
T ss_dssp SCCCEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC
T ss_pred CCccEEEEEcCCCeEEEEEC--CCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC
Confidence 3457999996 588999865 7789999999764322111 1222346788887 5899999996 699999998743
Q ss_pred c--EEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCC
Q 023864 181 N--KLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWP 257 (276)
Q Consensus 181 k--~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d 257 (276)
. .+..-....|.|.++.++++.||++| +.++|+.+|.+... .+.+.-+ ...+++-|...++.||.+.|.. +
T Consensus 156 ~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~----~~~~P~glav~~~~lywtd~~~-~ 229 (318)
T 3sov_A 156 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKG----SLPHPFALTLFEDILYWTDWST-H 229 (318)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS----CCSCEEEEEEETTEEEEEETTT-T
T ss_pred CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecC----CCCCceEEEEeCCEEEEEecCC-C
Confidence 2 22111122356777778899999999 69999999987432 2222211 2345667888899999999999 9
Q ss_pred eEEEEeCCCCcE
Q 023864 258 CIPYAYLQAFGS 269 (276)
Q Consensus 258 ~I~vIDp~T~~v 269 (276)
.|.++|+.+|+.
T Consensus 230 ~V~~~~~~~G~~ 241 (318)
T 3sov_A 230 SILACNKYTGEG 241 (318)
T ss_dssp EEEEEETTTCCS
T ss_pred eEEEEECCCCCc
Confidence 999999998763
No 67
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.12 E-value=2e-09 Score=91.61 Aligned_cols=153 Identities=8% Similarity=0.154 Sum_probs=107.9
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCcEE
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNKL 183 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk~i 183 (276)
....|++++++|+||.+.. +...|.++|..+.+..... ......+.||+++ +++||+.+..++.+++||+++.+..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~--~~~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADR--GNNRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp SSEEEEEECTTCCEEEEEG--GGTEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCCcceEECCCCCEEEEEC--CCCEEEEEECCCceeEeec-cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 5668999999999998765 6789999988776543321 1222245688887 4789999999999999999887654
Q ss_pred EEEecCCCCeeEE--eeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeE
Q 023864 184 EEFTHQMKDGWGL--ATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPCI 259 (276)
Q Consensus 184 ~~~~~~~~EGWGL--T~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I 259 (276)
.....+.....++ .+|| .||+++ +.+.|+++|+++..... ....+ ...+..+.+. +|.||+..+.. ++|
T Consensus 185 ~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~---~~~~~--~~~p~~i~~~~~g~l~v~~~~~-~~v 257 (270)
T 1rwi_B 185 VLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTV---LPFTG--LNTPLAVAVDSDRTVYVADRGN-DRV 257 (270)
T ss_dssp ECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEE---CCCCS--CSCEEEEEECTTCCEEEEEGGG-TEE
T ss_pred eecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCccee---eccCC--CCCceeEEECCCCCEEEEECCC-CEE
Confidence 3322111234454 4555 899988 68899999998765432 11111 2345556665 68999999999 999
Q ss_pred EEEeCCCC
Q 023864 260 PYAYLQAF 267 (276)
Q Consensus 260 ~vIDp~T~ 267 (276)
.+++....
T Consensus 258 ~~~~~~~~ 265 (270)
T 1rwi_B 258 VKLTSLEH 265 (270)
T ss_dssp EEECCCGG
T ss_pred EEEcCCCc
Confidence 99998763
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.12 E-value=1e-08 Score=90.34 Aligned_cols=160 Identities=11% Similarity=0.101 Sum_probs=109.7
Q ss_pred CCCceEEEEecCCEEEEEcCCCCC----CeEEEEeCCCCcEEEEee-cCCCceEEEEEEe-CCEEEEEEee------CCE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGR----SSVRRVALETGKVEAINQ-MEGSYFGEGLTLL-GEKLFQVTWL------QKT 171 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~----S~I~~iDl~tgkv~~~~~-l~~~~FgEGit~~-g~~LyqlTwk------~~~ 171 (276)
.....++.+++||+||.++. +. ..|.+||++++++..... .+......+++++ ++++|+.+.. .+.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~--~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYL--GDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp SSSEEEEEECTTSCEEEEEC--TTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCcceEEECCCCcEEEEeC--CCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 45568999999999998765 33 689999999998653332 2233345677876 4789999885 478
Q ss_pred EEEEeCCCCcEEEEEe-cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCC-CcEEEE----EEeeeCCEeeeeeeeeEEE
Q 023864 172 GFIYDQNNLNKLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQT-LKVIRK----DIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~-~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t-~~vi~~----I~V~~~g~pv~~lNELE~i 244 (276)
++.+|+++.+...... ...+.|..+++||+.||+++ +.+.|+++|+++ .+.... +.....+. ..++.|.+.
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d 241 (333)
T 2dg1_A 164 VYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCID 241 (333)
T ss_dssp EEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEB
T ss_pred EEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEEC
Confidence 9999988755432222 12246667789999999987 578999999864 333222 22211121 234556665
Q ss_pred -CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 245 -KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
+|.||+..+.. +.|.++|++ ++.
T Consensus 242 ~~G~l~v~~~~~-~~v~~~d~~-g~~ 265 (333)
T 2dg1_A 242 SDDNLYVAMYGQ-GRVLVFNKR-GYP 265 (333)
T ss_dssp TTCCEEEEEETT-TEEEEECTT-SCE
T ss_pred CCCCEEEEEcCC-CEEEEECCC-CCE
Confidence 68999999888 999999995 453
No 69
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.10 E-value=4.6e-09 Score=91.04 Aligned_cols=159 Identities=13% Similarity=0.125 Sum_probs=108.2
Q ss_pred CCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEE-eecCC---CceEEEEEEe-CCEEEEEEeeC---------
Q 023864 105 AFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAI-NQMEG---SYFGEGLTLL-GEKLFQVTWLQ--------- 169 (276)
Q Consensus 105 aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~-~~l~~---~~FgEGit~~-g~~LyqlTwk~--------- 169 (276)
....|+.+++| |+||.++. + +.|.+||++ |++... ..... .....+++++ +++||+.+...
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~--~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADM--R-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CCEEEEEECSSSSEEEEEET--T-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCceEEEecCCCcEEEEEC--C-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 34579999999 99998765 2 389999999 887543 32211 1234578886 47999999875
Q ss_pred ------CEEEEEeCCCCcEEEEEe-cCCCCeeEEe----eCCCEEEEEC-CCceEEEEcCC-CCcEEEEEEe-eeCCEee
Q 023864 170 ------KTGFIYDQNNLNKLEEFT-HQMKDGWGLA----TDGKVLFGSD-GSSMLYQIDPQ-TLKVIRKDIV-RYKGREV 235 (276)
Q Consensus 170 ------~~v~V~D~~tlk~i~~~~-~~~~EGWGLT----~Dg~~L~vSD-GS~~L~viDp~-t~~vi~~I~V-~~~g~pv 235 (276)
+.++.+|++ .+...... ...+.|..++ +||+.||++| +.+.|+++|++ +.+....-.. ...+...
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred cccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence 689999987 44433222 1234677788 8899999998 68899999976 4543321111 1111110
Q ss_pred eeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 236 RNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 236 ~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
..++.|.+. +|.||+..+.. +.|.++|+++++.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~-~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGS-SHIEVFGPDGGQP 259 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETT-TEEEEECTTCBSC
T ss_pred CCCCceEECCCCCEEEEEcCC-CEEEEEcCCCCcE
Confidence 234556665 68999999988 9999999997653
No 70
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.09 E-value=2.9e-08 Score=88.56 Aligned_cols=166 Identities=10% Similarity=0.014 Sum_probs=120.4
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEee-C
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWL-Q 169 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk-~ 169 (276)
+-+++-+++.....-...+.+++||++|.+ +...|..+|+ +|+++.+.+.+......++... ++++++.... .
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs----~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~ 98 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATKAGEILFS----YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHP 98 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECTTSCEEEE----CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTT
T ss_pred CCeEEEEeCCCccCCCcCeEECCCCCEEEe----CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCC
Confidence 557788887643234468899999998885 3467999999 8999999988743333344443 5677777666 7
Q ss_pred CEEEEEeCCCCcEEEEEecCC--------CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeee
Q 023864 170 KTGFIYDQNNLNKLEEFTHQM--------KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~--------~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNEL 241 (276)
++++.+|+ +.+.+.+++... +.+....+||+.++...+..+|..+|++ ++++.+..... .|..- .
T Consensus 99 ~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~--~~~~~---~ 171 (276)
T 3no2_A 99 STILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG--TPFSS---A 171 (276)
T ss_dssp EEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS--CCCEE---E
T ss_pred CEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC--Cccce---e
Confidence 89999997 788888887541 1233466788877665578999999998 99988877652 23221 1
Q ss_pred EEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 242 EFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 242 E~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
...+|.+++..... ++|..+|++||+++
T Consensus 172 ~~~~g~~~v~~~~~-~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 172 FLDNGDCLVACGDA-HCFVQLNLESNRIV 199 (276)
T ss_dssp ECTTSCEEEECBTT-SEEEEECTTTCCEE
T ss_pred EcCCCCEEEEeCCC-CeEEEEeCcCCcEE
Confidence 12378888888778 89999999998765
No 71
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.09 E-value=2.6e-09 Score=95.36 Aligned_cols=158 Identities=8% Similarity=0.019 Sum_probs=110.3
Q ss_pred CCceEEEEec-CCEEEEEcCC--C-------------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--CEEEEEE
Q 023864 105 AFTQGLLYAE-NDTLFESTGL--Y-------------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQVT 166 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~--y-------------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~~LyqlT 166 (276)
.+..++.+++ +|+||.+... | ....|.++|++++++..... .-.++.||++.. +.||+..
T Consensus 126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--ELHVPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--EESCCCEEEECTTSSEEEEEE
T ss_pred cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--CCccCcceEECCCCCEEEEEe
Confidence 4678999999 9999997642 1 23679999999997643321 123456888874 4799999
Q ss_pred eeCCEEEEEeCCCCc--EEEEE-ecCCCCeeEEeeCCCEEEEEC-C----------CceEEEEcCCCCcEEEEEEeeeCC
Q 023864 167 WLQKTGFIYDQNNLN--KLEEF-THQMKDGWGLATDGKVLFGSD-G----------SSMLYQIDPQTLKVIRKDIVRYKG 232 (276)
Q Consensus 167 wk~~~v~V~D~~tlk--~i~~~-~~~~~EGWGLT~Dg~~L~vSD-G----------S~~L~viDp~t~~vi~~I~V~~~g 232 (276)
..++++.+||.++.+ ....+ ..+.|.|..+.+|| .||+++ + ...|..+||+ ++++..+.+.. |
T Consensus 204 ~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~-g 280 (322)
T 2fp8_A 204 FLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPP-P 280 (322)
T ss_dssp GGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCT-T
T ss_pred CCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCC-CEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCC-C
Confidence 999999999987521 12222 12224555556666 499988 4 4689999985 88888877653 3
Q ss_pred EeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 233 REVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 233 ~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
.++..+..+...+|+||+..+.. +.|.++|++..+
T Consensus 281 ~~~~~~~~~~~~~g~L~v~~~~~-~~i~~~~~~~~~ 315 (322)
T 2fp8_A 281 FAGEHFEQIQEHDGLLYIGTLFH-GSVGILVYDKKG 315 (322)
T ss_dssp TTTSCCCEEEEETTEEEEECSSC-SEEEEEEC----
T ss_pred CccccceEEEEeCCEEEEeecCC-CceEEEeccccc
Confidence 33455556666799999999999 999999998643
No 72
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.08 E-value=4.4e-09 Score=93.90 Aligned_cols=154 Identities=11% Similarity=0.024 Sum_probs=106.3
Q ss_pred CceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEee-cC--CCceEEEEEEeC--CEEEEEEee-----------
Q 023864 106 FTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQ-ME--GSYFGEGLTLLG--EKLFQVTWL----------- 168 (276)
Q Consensus 106 FTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~-l~--~~~FgEGit~~g--~~LyqlTwk----------- 168 (276)
...|+++++ +|+||+++. + ..|.++|++++++..-.. .+ ...+..+++++. ++||+.+..
T Consensus 81 ~p~gi~~~~~~g~l~v~d~--~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDC--Y-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CEEEEEEETTTTEEEEEET--T-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCceEEEcCCCCcEEEEEC--C-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 356999997 799999755 2 349999998875432221 11 124678899974 799999875
Q ss_pred ------CCEEEEEeCCCCcEEEEEe-cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcE--EEEEEeeeCCEeeeee
Q 023864 169 ------QKTGFIYDQNNLNKLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKV--IRKDIVRYKGREVRNL 238 (276)
Q Consensus 169 ------~~~v~V~D~~tlk~i~~~~-~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~v--i~~I~V~~~g~pv~~l 238 (276)
.+.++++|+++.+...... ...+.|..+++||+.||++| +.++|+++|+++.+. .+.+. ...| +
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-----P 231 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-----P 231 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-----E
T ss_pred hcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-----C
Confidence 3789999998776432221 22468888999999999998 678999999875321 11111 1223 4
Q ss_pred eeeEEE-CCEEEEEeCC----------CCCeEEEEeCCCCcEE
Q 023864 239 NELEFI-KGEVWANVWQ----------VWPCIPYAYLQAFGSS 270 (276)
Q Consensus 239 NELE~i-dG~lyANvw~----------s~d~I~vIDp~T~~v~ 270 (276)
+-|... +|.||+..|. . +.|.++||+ |+++
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~-~~v~~~d~~-G~~~ 272 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVD-PKGIKFDEF-GNIL 272 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEE-EEEEEECTT-SCEE
T ss_pred CCeEECCCCCEEEEecCcccccccCCCc-cEEEEECCC-CCEE
Confidence 445555 5789999987 6 789999996 4543
No 73
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.08 E-value=3.3e-08 Score=89.54 Aligned_cols=153 Identities=10% Similarity=0.033 Sum_probs=108.7
Q ss_pred CCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCC---CcEEEEeecC-CCceEEEEEEe--CCEEEEEEeeCCEEEEEeC
Q 023864 105 AFTQGLLYAEN-DTLFESTGLYGRSSVRRVALET---GKVEAINQME-GSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQ 177 (276)
Q Consensus 105 aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~t---gkv~~~~~l~-~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~ 177 (276)
....|+.|+++ ++||.+.. +...|.++|+++ +.....+ ++ .-..++|++++ +++||.....++++.++|+
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~-~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SSEEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEE-EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 34579999974 78999865 788999999986 2221221 22 12346789986 6899999999999999998
Q ss_pred CCCcEEEEEe--cCCCCeeEEeeCCCEEEEEC-CC-ceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEE
Q 023864 178 NNLNKLEEFT--HQMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWAN 251 (276)
Q Consensus 178 ~tlk~i~~~~--~~~~EGWGLT~Dg~~L~vSD-GS-~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyAN 251 (276)
+......-+. ...|.|..+.+++..||++| |. .+|+.+|++. +..+.+ +.. .+..+|-|.+. +++||+.
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~-~~~---~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL-VTE---NIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE-ECS---SCSCEEEEEEETTTTEEEEE
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEE-EEC---CCCCceEEEEeccCCEEEEE
Confidence 7654333333 22456666777899999999 54 7999999863 333322 221 35678899987 6799999
Q ss_pred eCCCCCeEEEEeCCC
Q 023864 252 VWQVWPCIPYAYLQA 266 (276)
Q Consensus 252 vw~s~d~I~vIDp~T 266 (276)
.+.. +.|.++|+..
T Consensus 182 D~~~-~~I~~~d~dg 195 (316)
T 1ijq_A 182 DSKL-HSISSIDVNG 195 (316)
T ss_dssp ETTT-TEEEEEETTS
T ss_pred ECCC-CeEEEEecCC
Confidence 9999 9999999974
No 74
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.06 E-value=1.8e-08 Score=94.21 Aligned_cols=155 Identities=12% Similarity=-0.003 Sum_probs=114.4
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tl 180 (276)
.....|+.|++ +++||.+.- ....|++++++++.+...+..+ ...++|++++ +++||...+..+++.++|++..
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCEEEEECSS-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CCccEEEEEecCCCeEEEEeC--CCCcEEEEecCCCCcEEEEeCC-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 34568999995 578998854 7789999999987654433222 2345788887 6899999999999999998765
Q ss_pred cEEEEEec--CCCCeeEEeeCCCEEEEEC-CC-ceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEEeCC
Q 023864 181 NKLEEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQ 254 (276)
Q Consensus 181 k~i~~~~~--~~~EGWGLT~Dg~~L~vSD-GS-~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyANvw~ 254 (276)
.....+.. ..|.|..+.+++..||++| +. .+|+.+|++..... .+ +.. .+..+|-|.+. +++||+..+.
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~-~~~---~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II-ADT---HLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE-ECS---SCSCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EE-EEC---CCCCeeeEEEeCCCCEEEEEECC
Confidence 43333332 2456777778899999999 66 89999998754332 22 211 24568888886 7899999999
Q ss_pred CCCeEEEEeCCCC
Q 023864 255 VWPCIPYAYLQAF 267 (276)
Q Consensus 255 s~d~I~vIDp~T~ 267 (276)
. +.|.++|+...
T Consensus 267 ~-~~I~~~d~dG~ 278 (386)
T 3v65_B 267 H-HVIERANLDGS 278 (386)
T ss_dssp T-TEEEEECTTSC
T ss_pred C-CEEEEEeCCCC
Confidence 9 99999998753
No 75
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.05 E-value=5.4e-08 Score=83.00 Aligned_cols=164 Identities=7% Similarity=0.019 Sum_probs=115.5
Q ss_pred EEEEEEecC-CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeC-CEEEEEEeeCC
Q 023864 94 QVVNEFPHD-PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQK 170 (276)
Q Consensus 94 ~Vv~~~Phd-~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g-~~LyqlTwk~~ 170 (276)
.-+++++.. ......++.++++|+||.++. +...|.++|++ +++.. ..++. .....+++++. +++|+.+..++
T Consensus 8 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~--~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 83 (300)
T 2qc5_A 8 FYLEEFNLSIPDSGPYGITSSEDGKVWFTQH--KANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGAN 83 (300)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred eeEEEEecCCCCCCcceeeECCCCCEEEEcC--CCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCC
Confidence 345666552 345678999999999999865 67899999998 87754 44553 25677898874 78999999899
Q ss_pred EEEEEeCCCCcEEEEEecC--CCCeeEEeeC-CCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-C
Q 023864 171 TGFIYDQNNLNKLEEFTHQ--MKDGWGLATD-GKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~--~~EGWGLT~D-g~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-d 245 (276)
.+++||++ .+. .++..+ .....+++-| ...||+++ +.+.|+.+|++ .++. .+.... ....++.+.+. +
T Consensus 84 ~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~---~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 84 KIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPN---KGSYPAFITLGSD 156 (300)
T ss_dssp EEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSS---TTCCEEEEEECTT
T ss_pred eEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCC---CCCCceeEEECCC
Confidence 99999988 444 455542 1234455543 33578877 58899999998 6655 333221 12345666664 6
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
|.||+..... +.|.++|+ +++..
T Consensus 157 g~l~v~~~~~-~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 157 NALWFTENQN-NSIGRITN-TGKLE 179 (300)
T ss_dssp SSEEEEETTT-TEEEEECT-TCCEE
T ss_pred CCEEEEecCC-CeEEEECC-CCcEE
Confidence 7899999888 99999999 65543
No 76
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.04 E-value=2.3e-08 Score=90.57 Aligned_cols=165 Identities=10% Similarity=0.060 Sum_probs=106.1
Q ss_pred EEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCC-CCcEEE--EeecCC-CceEEEEEEe--CCEEEEEEee
Q 023864 96 VNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE-TGKVEA--INQMEG-SYFGEGLTLL--GEKLFQVTWL 168 (276)
Q Consensus 96 v~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~-tgkv~~--~~~l~~-~~FgEGit~~--g~~LyqlTwk 168 (276)
+..++++......++.|+|||+ ||.+. .+.+.|++||++ +|++.. ...++. .....++++. ++.||+.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~spdG~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 136 VQNYEYQENTGIHGMVFDPTETYLYSAD--LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred EeeEEeCCCCcceEEEECCCCCEEEEEc--CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 4445555567788999999985 77654 377899999998 888643 334432 3335566765 5689999999
Q ss_pred CCEEEEEeC--CCCcEE---EEEec-CC--------------CCeeE-EeeCCCEEEEEC-CCc-----eEEEEcCC-CC
Q 023864 169 QKTGFIYDQ--NNLNKL---EEFTH-QM--------------KDGWG-LATDGKVLFGSD-GSS-----MLYQIDPQ-TL 220 (276)
Q Consensus 169 ~~~v~V~D~--~tlk~i---~~~~~-~~--------------~EGWG-LT~Dg~~L~vSD-GS~-----~L~viDp~-t~ 220 (276)
++.+.+||. ++.+.. .++.. +. +.+.. +++||++||+++ +.+ +|.++|.+ ++
T Consensus 214 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g 293 (365)
T 1jof_A 214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG 293 (365)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS
T ss_pred CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCC
Confidence 999988764 455542 33432 10 22345 679999999998 555 89888875 67
Q ss_pred cEEEEEE-eeeCCEeeeeeeeeEE-----ECCEEEEEeCCCCCeEEEEeCCC
Q 023864 221 KVIRKDI-VRYKGREVRNLNELEF-----IKGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 221 ~vi~~I~-V~~~g~pv~~lNELE~-----idG~lyANvw~s~d~I~vIDp~T 266 (276)
++..... +...+. .+..+.+ .+++||+.+..+ +.|.++|.+.
T Consensus 294 ~~~~~~~~~~~~~~---~~~~~a~sp~~~dg~~l~v~~~~~-~~v~v~~~~~ 341 (365)
T 1jof_A 294 SIEKQLFLSPTPTS---GGHSNAVSPCPWSDEWMAITDDQE-GWLEIYRWKD 341 (365)
T ss_dssp CEEEEEEEEECSSC---CTTCCCEEECTTCTTEEEEECSSS-CEEEEEEEET
T ss_pred CEEEeeeeeecCCC---CcccceecCCCcCCCEEEEEEcCC-CeEEEEEEch
Confidence 6554221 211111 1111222 244799988778 8888876655
No 77
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.03 E-value=2.1e-08 Score=92.45 Aligned_cols=154 Identities=12% Similarity=0.006 Sum_probs=113.3
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
....||.|++ +++||.+.- ....|++++++++.+...+..+ ...++|++++ +++||...+..+.+.++|++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEec--cCCceEEEecCCCCceEEEeCC-CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 3467999995 578998754 7789999999987654333222 2345788887 68999999999999999987654
Q ss_pred EEEEEec--CCCCeeEEeeCCCEEEEEC-CC-ceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEEeCCC
Q 023864 182 KLEEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQV 255 (276)
Q Consensus 182 ~i~~~~~--~~~EGWGLT~Dg~~L~vSD-GS-~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyANvw~s 255 (276)
...-+.. ..|.|..+.+++..||++| +. .+|+.+|++.-... .+ +. ..+..+|-|.+. +|+||+.-+..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~-~~---~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II-AD---THLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ES-CC---SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EE-EE---CCCCCcceEEEeCCCCEEEEEECCC
Confidence 3322322 2456777788899999999 66 89999998753222 21 11 124578889987 68999999999
Q ss_pred CCeEEEEeCCCC
Q 023864 256 WPCIPYAYLQAF 267 (276)
Q Consensus 256 ~d~I~vIDp~T~ 267 (276)
+.|.++|+...
T Consensus 225 -~~I~~~~~dG~ 235 (349)
T 3v64_C 225 -HVIERANLDGS 235 (349)
T ss_dssp -TEEEEEETTSC
T ss_pred -CEEEEEeCCCC
Confidence 99999998753
No 78
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.03 E-value=2.2e-08 Score=103.37 Aligned_cols=158 Identities=11% Similarity=-0.026 Sum_probs=113.4
Q ss_pred CCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCC
Q 023864 104 RAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNN 179 (276)
Q Consensus 104 ~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~t 179 (276)
-....||+++.. ++||.+.. +...|.++|++.......+. ..-..+.||+++ +++||...|.. +++.++|++.
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~--~~~~I~v~~ldG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEET--TTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCcceeeeeecCCcEEEEec--CCCeEEEEeCCCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 345579999965 58999855 78899999998654322221 222236788886 58999999987 8999999876
Q ss_pred CcEEEEEecC--CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCC
Q 023864 180 LNKLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVW 256 (276)
Q Consensus 180 lk~i~~~~~~--~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~ 256 (276)
.....-+... .|.|.+|.+++++||++| +.++|.++|++.......+.. +..+.++.-|.+.+++||+..|..
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~---~~~l~~P~glav~~~~lYwtD~~~- 622 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED---EKRLAHPFSLAVFEDKVFWTDIIN- 622 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC---TTTTSSEEEEEEETTEEEEEETTT-
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC---CCccCCCCEEEEeCCEEEEEECCC-
Confidence 5544334322 345566667799999999 689999999875443322221 112234455778899999999999
Q ss_pred CeEEEEeCCCCc
Q 023864 257 PCIPYAYLQAFG 268 (276)
Q Consensus 257 d~I~vIDp~T~~ 268 (276)
+.|.++|..+|+
T Consensus 623 ~~I~~~dk~tG~ 634 (791)
T 3m0c_C 623 EAIFSANRLTGS 634 (791)
T ss_dssp TEEEEEETTTCC
T ss_pred CEEEEEeCCCCc
Confidence 999999998875
No 79
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.00 E-value=3.7e-08 Score=87.83 Aligned_cols=173 Identities=11% Similarity=0.063 Sum_probs=120.5
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCC-CCeEEEEeCCCCcEEEEeecCCC-----ceEEEEEEe-CCEEEEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYG-RSSVRRVALETGKVEAINQMEGS-----YFGEGLTLL-GEKLFQVT 166 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg-~S~I~~iDl~tgkv~~~~~l~~~-----~FgEGit~~-g~~LyqlT 166 (276)
+++-++.........+..+.+||+++.+.. + ...|..+|+ +|+++.+..++.. ....+++.. ++.+++..
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~--~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDGNALVAWC--GHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTSCEEEEEE--STTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred CEEEEEcCCCCccccccEECCCCCEEEEec--CCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 566777653344567888999998777655 4 778999997 7888888776432 122344443 46777788
Q ss_pred eeCCEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeee-CCEeeeeeeeeEEE
Q 023864 167 WLQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFI 244 (276)
Q Consensus 167 wk~~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~-~g~pv~~lNELE~i 244 (276)
..++++.+||++ .+++.++..+ .+.+-...++|+.++.+.+..+|..+|++|++++-++...+ ++.++..+.-+...
T Consensus 143 ~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~ 221 (276)
T 3no2_A 143 FATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL 221 (276)
T ss_dssp TTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred cCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc
Confidence 889999999998 9999999865 23343345567777665567799999999999998887543 23333334433333
Q ss_pred -CCEEEEEeCCC---------CCeEEEEeCCCCcEEE
Q 023864 245 -KGEVWANVWQV---------WPCIPYAYLQAFGSSL 271 (276)
Q Consensus 245 -dG~lyANvw~s---------~d~I~vIDp~T~~v~l 271 (276)
||.+|+..|+. +..+..||+ +|+++-
T Consensus 222 ~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~~W 257 (276)
T 3no2_A 222 QNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVW 257 (276)
T ss_dssp TTSCEEEEEECTTCTTGGGSCCCSEEEECT-TSBEEE
T ss_pred CCCCEEEEeccCccccccccCCceEEEECC-CCCEEE
Confidence 88999999743 146999998 667653
No 80
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.97 E-value=6.7e-08 Score=90.99 Aligned_cols=154 Identities=8% Similarity=0.054 Sum_probs=111.7
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCc----EEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGK----VEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQ 177 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgk----v~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~ 177 (276)
....||.|++ +++||.+.- ....|++++++... ....+ -..-..++||+++ +++||.+.+..+++.++|+
T Consensus 112 ~~~~~l~~d~~~~~lywsD~--~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp SCEEEEEEETTTTEEEEEET--TTTEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CcceEEeeeeccCceEEEec--CCCeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 3457999996 478999855 67899999997632 21111 1123457899997 6999999999999999999
Q ss_pred CCCcEEEEEecC--CCCeeEEeeCCCEEEEEC-C-CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEE
Q 023864 178 NNLNKLEEFTHQ--MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWAN 251 (276)
Q Consensus 178 ~tlk~i~~~~~~--~~EGWGLT~Dg~~L~vSD-G-S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyAN 251 (276)
+.......+... .|.|..+.+.+..||++| | ..+|+.+|++.......+.. .+..+|.|.+. +++||+.
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~-----~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-----NIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS-----SCSCEEEEEEETTTTEEEEE
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC-----CCCceEEEEEEeCCCEEEEE
Confidence 876654444422 356777788899999999 6 47999999875433222221 24578889888 6799999
Q ss_pred eCCCCCeEEEEeCCCC
Q 023864 252 VWQVWPCIPYAYLQAF 267 (276)
Q Consensus 252 vw~s~d~I~vIDp~T~ 267 (276)
-+.. +.|.++|.+..
T Consensus 264 D~~~-~~I~~~d~dG~ 278 (400)
T 3p5b_L 264 DSKL-HSISSIDVNGG 278 (400)
T ss_dssp ETTT-TEEEEEETTSC
T ss_pred ECCC-CEEEEEeCCCC
Confidence 9999 99999998753
No 81
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.96 E-value=3.9e-07 Score=82.26 Aligned_cols=173 Identities=7% Similarity=-0.019 Sum_probs=120.6
Q ss_pred eeeEEEEEEecCCC---C-CceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC---------CCceEEEEEE
Q 023864 91 YTIQVVNEFPHDPR---A-FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME---------GSYFGEGLTL 157 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~---a-FTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~---------~~~FgEGit~ 157 (276)
.+.+++=+++.... . ..-...+. ++++|..+. +..|..+|.+||+++-+.+++ ...+.-+.+.
T Consensus 26 ~~~~~~W~~~~~~~~~~~~~~~~p~v~-~~~v~~~~~---~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 101 (376)
T 3q7m_A 26 FTPTTAWSTSVGSGIGNFYSNLHPALA-DNVVYAADR---AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV 101 (376)
T ss_dssp SCCEEEEEECCTTTTTTSCCCCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE
T ss_pred CcceEEeEEecCCCccccceeeccEEE-CCEEEEEcC---CCeEEEEEccCCceeeeecCccccccccccCcccccCceE
Confidence 45567767665321 1 11244555 589998654 458999999999998777775 3456677888
Q ss_pred eCCEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeee
Q 023864 158 LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (276)
Q Consensus 158 ~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~ 237 (276)
.++++|+.+. ++.++.+|++|.+++-+++.+..-.-....+++.+|+......|+.+|++|++++-+............
T Consensus 102 ~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSE-KAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEET-TSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcC-CCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 9999999885 578999999999999888765111112233467888877788999999999999877766431111111
Q ss_pred eeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 238 LNELEFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 238 lNELE~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.......+|.||+.. .. ..|..+|++||++.
T Consensus 181 ~~~~~~~~~~v~~g~-~~-g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 181 ESAPTTAFGAAVVGG-DN-GRVSAVLMEQGQMI 211 (376)
T ss_dssp CCCCEEETTEEEECC-TT-TEEEEEETTTCCEE
T ss_pred CCCcEEECCEEEEEc-CC-CEEEEEECCCCcEE
Confidence 123345689999865 34 68999999998865
No 82
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.96 E-value=7.8e-08 Score=90.54 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=106.9
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEe---ecC---CCceEEEEEEe--CCEEEEEEeeCCEEEE
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAIN---QME---GSYFGEGLTLL--GEKLFQVTWLQKTGFI 174 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~---~l~---~~~FgEGit~~--g~~LyqlTwk~~~v~V 174 (276)
.....|+++++ +|.||.+. ....|.+||+++++..... ..+ ..|+ -|++++ +++||+....++++.+
T Consensus 218 ~~~p~~iav~p~~g~lyv~d---~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~-~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVD---SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPG-PYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp CSCCCBCEECTTSSEEEEEC---TTCEEEEEETTTCCEEEEEECCCCSCCCCSSC-CEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCcEEEEEeCCCCeEEEEE---CCCcEEEEECCCCCEEEEecccccCCCCCCcc-ccEEEeCCCCEEEEEeCCCCEEEE
Confidence 45557999999 68999843 3568999999988753321 111 1223 177776 5899999999999999
Q ss_pred EeCCCCcEEEEE-e----------------cCCCCeeEEeeCCCEEEEEC--CCceEEEEcCCCCcEEEEEEee-e----
Q 023864 175 YDQNNLNKLEEF-T----------------HQMKDGWGLATDGKVLFGSD--GSSMLYQIDPQTLKVIRKDIVR-Y---- 230 (276)
Q Consensus 175 ~D~~tlk~i~~~-~----------------~~~~EGWGLT~Dg~~L~vSD--GS~~L~viDp~t~~vi~~I~V~-~---- 230 (276)
+|.+.. +..+ . +..|.|..+.+||+ ||++| +.++|..+|+.++++....-.. .
T Consensus 294 ~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~ 370 (409)
T 3hrp_A 294 ITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQI 370 (409)
T ss_dssp ECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCC
T ss_pred EecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcC
Confidence 998753 2222 1 11245556667877 99998 5789999998788754332220 1
Q ss_pred CC----EeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCC
Q 023864 231 KG----REVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 231 ~g----~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~ 265 (276)
+| ..+..++.+.+. +|.||++.|.. ++|.+|+++
T Consensus 371 ~g~~~~~~~~~P~giavd~~g~lyVad~~n-~~Ir~i~~e 409 (409)
T 3hrp_A 371 DGTPLEATFNYPYDICYDGEGGYWIAEAWG-KAIRKYAVE 409 (409)
T ss_dssp CBSTTTCCBSSEEEEEECSSSEEEEEESTT-CEEEEEEEC
T ss_pred CCChhceEeCCceEEEEcCCCCEEEEECCC-CeEEEEEeC
Confidence 11 124567777777 48999999999 999999875
No 83
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.95 E-value=1.4e-07 Score=94.48 Aligned_cols=153 Identities=10% Similarity=0.070 Sum_probs=110.5
Q ss_pred CceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEee-CCEEEEEeCCCCc
Q 023864 106 FTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL-QKTGFIYDQNNLN 181 (276)
Q Consensus 106 FTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk-~~~v~V~D~~tlk 181 (276)
...||+++.. ++||.+.. +...|.++|++......-.. ..-..+.||+++ ++.||...|. .+++..+|++.-.
T Consensus 81 ~P~GlAvD~~~~~LY~tD~--~~~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADT--GTNRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE 157 (628)
T ss_dssp CCCEEEEETTTTEEEEEET--TTTEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CcceEEEEeCCCEEEEEEC--CCCEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence 4579999854 78999755 88999999997653211111 222336788998 6899999997 6899999986543
Q ss_pred EEEEEe-cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeE
Q 023864 182 KLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPCI 259 (276)
Q Consensus 182 ~i~~~~-~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I 259 (276)
...-+. ...|.|.++.+++++||++| +.++|..+|++.... ++....-. ++--|...+++||+..|.. +.|
T Consensus 158 ~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~----~P~glav~~~~ly~tD~~~-~~I 230 (628)
T 4a0p_A 158 RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLP----HPFGLTQYQDYIYWTDWSR-RSI 230 (628)
T ss_dssp CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCS----CEEEEEEETTEEEEEETTT-TEE
T ss_pred eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCC----CceEEEEECCEEEEecCCC-CEE
Confidence 322222 22356677778899999999 799999999876544 22222222 4445778899999999999 999
Q ss_pred EEEeCCCCc
Q 023864 260 PYAYLQAFG 268 (276)
Q Consensus 260 ~vIDp~T~~ 268 (276)
.++|..||+
T Consensus 231 ~~~dk~tg~ 239 (628)
T 4a0p_A 231 ERANKTSGQ 239 (628)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCC
Confidence 999998875
No 84
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.94 E-value=4e-08 Score=93.80 Aligned_cols=157 Identities=9% Similarity=-0.036 Sum_probs=108.4
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcE-EEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCC--
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKV-EAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQN-- 178 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv-~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~-- 178 (276)
....|+++++ +|.||++.. +...|+++|+++|++ ......+....+-||+++ +++||++.+.++.+.++|.+
T Consensus 228 ~~P~giavd~~~G~lyv~d~--~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~ 305 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRY--HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRE 305 (433)
T ss_dssp SSBCCCEECTTTCCEEECBT--TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTT
T ss_pred CCCCEEEEeCCCCeEEEEEC--CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCC
Confidence 3457999999 789998754 788999999999987 333344443333467776 46799999999999998854
Q ss_pred CCcE--EEEEe-c-C-------------CCCeeEEee----------CCCEEEEEC-CCceEEEEcCCCCcEEEEEEeee
Q 023864 179 NLNK--LEEFT-H-Q-------------MKDGWGLAT----------DGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY 230 (276)
Q Consensus 179 tlk~--i~~~~-~-~-------------~~EGWGLT~----------Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~ 230 (276)
+.+. ...+. . + ....+|++- ++..||++| +.++|..+|| ++++....-.+.
T Consensus 306 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~ 384 (433)
T 4hw6_A 306 TGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGN 384 (433)
T ss_dssp TCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCT
T ss_pred CcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCC
Confidence 3221 11221 0 0 123455664 456899999 7899999997 564432222111
Q ss_pred -------CC-----EeeeeeeeeEEE--CCEEEEEeCCCCCeEEEEeCC
Q 023864 231 -------KG-----REVRNLNELEFI--KGEVWANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 231 -------~g-----~pv~~lNELE~i--dG~lyANvw~s~d~I~vIDp~ 265 (276)
+| ..+.++..+.+. +|.||++.+.. ++|.+|+++
T Consensus 385 ~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n-~rIr~i~~e 432 (433)
T 4hw6_A 385 SREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN-HRVRKIAPE 432 (433)
T ss_dssp TCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG-TEEEEEEEC
T ss_pred CCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC-CEEEEEecC
Confidence 12 134567788888 78999999999 999999986
No 85
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.94 E-value=6.1e-08 Score=87.33 Aligned_cols=152 Identities=11% Similarity=0.062 Sum_probs=103.4
Q ss_pred CceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC---CceEEEEEEe-CCEEEEEEee------CCEEEEE
Q 023864 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG---SYFGEGLTLL-GEKLFQVTWL------QKTGFIY 175 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~---~~FgEGit~~-g~~LyqlTwk------~~~v~V~ 175 (276)
...++.+++||++|.++. +.|.++|+++|++......+. .....+++++ ++++|+.+.. .+.++.+
T Consensus 91 ~v~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 91 MGSALAKISDSKQLIASD----DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp CEEEEEEEETTEEEEEET----TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred cceEEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 467999999999998763 459999999998755444332 2245567776 4689998874 3689999
Q ss_pred eCCCCcEEEEEe-cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCC--CC-cEE--EEE-Eee-eCCEeeeeeeeeEEE-C
Q 023864 176 DQNNLNKLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ--TL-KVI--RKD-IVR-YKGREVRNLNELEFI-K 245 (276)
Q Consensus 176 D~~tlk~i~~~~-~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~--t~-~vi--~~I-~V~-~~g~pv~~lNELE~i-d 245 (276)
| +.+...-.. ...+.|..+++||+.||++| ..+.|+++|.+ ++ ++. +.+ ... ..+ .++.+.+. +
T Consensus 167 ~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~----~p~gi~~d~~ 240 (326)
T 2ghs_A 167 A--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKG----GMDGSVCDAE 240 (326)
T ss_dssp E--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSS----EEEEEEECTT
T ss_pred e--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCC----CCCeeEECCC
Confidence 9 443322111 12346777789999999988 57899999975 65 432 111 111 122 33455555 6
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v 269 (276)
|.||+..|.. +.|.++|+ +++.
T Consensus 241 G~lwva~~~~-~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 241 GHIWNARWGE-GAVDRYDT-DGNH 262 (326)
T ss_dssp SCEEEEEETT-TEEEEECT-TCCE
T ss_pred CCEEEEEeCC-CEEEEECC-CCCE
Confidence 8999999999 99999999 4454
No 86
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.93 E-value=1.6e-08 Score=87.68 Aligned_cols=154 Identities=14% Similarity=0.154 Sum_probs=104.9
Q ss_pred CCceEEEEecCCEEEEEcCCCC-------------CCeEEEEeCCCCcEEEEeecCCCceEEEEEEe----CC--EEEEE
Q 023864 105 AFTQGLLYAENDTLFESTGLYG-------------RSSVRRVALETGKVEAINQMEGSYFGEGLTLL----GE--KLFQV 165 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg-------------~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~----g~--~Lyql 165 (276)
....++.++++|+||.++...+ ...|.++|++ +++..... ....+.|+++. .+ .||+.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EESSEEEEEEEECTTSCEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCCCcceEEEecccCCCCCEEEEE
Confidence 3467999999999999876321 2689999987 77644322 12245788887 43 79999
Q ss_pred EeeCCEEEEEeCC-CCcE--EEEE-ecC-----CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEee
Q 023864 166 TWLQKTGFIYDQN-NLNK--LEEF-THQ-----MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREV 235 (276)
Q Consensus 166 Twk~~~v~V~D~~-tlk~--i~~~-~~~-----~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv 235 (276)
+..++.+.+||.+ +.+. ...+ .++ .+.|..+.+|| .||+++ +.+.|..+|+++.+.+..+....
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~----- 267 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQPKMRIRCPF----- 267 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSCSEEEECSS-----
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcEeEEEeCCC-----
Confidence 9999999999975 3331 1122 121 12333344555 688887 68899999999888777665432
Q ss_pred eeeeeeEEE-CCE-EEEEeCCCCCeEEEEeCCCCc
Q 023864 236 RNLNELEFI-KGE-VWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 236 ~~lNELE~i-dG~-lyANvw~s~d~I~vIDp~T~~ 268 (276)
..+..+.+. ||. ||+..... +.|.++|+++.+
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~-~~l~~~~~~~~g 301 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN-NAVWKFEWQRNG 301 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-TEEEEEECSSCB
T ss_pred CCceeEEECCCCCEEEEEeCCC-CeEEEEeCCCCC
Confidence 234445553 565 99999887 899999998743
No 87
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.92 E-value=7.4e-08 Score=88.29 Aligned_cols=151 Identities=12% Similarity=0.082 Sum_probs=108.6
Q ss_pred eEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCcEEE
Q 023864 108 QGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 108 QGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk~i~ 184 (276)
.||.|++. ++||.+.- +...|.+++++++.....+....-..++|++++ ++.||...+..+.+.++|++......
T Consensus 38 ~~ld~d~~~~~lyw~D~--~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSDV--SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEGGGTEEEEEET--TTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEEEeCCCEEEEEEC--CCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 48899864 78999854 778999999987642111111112246789987 78999999999999999987643322
Q ss_pred EEec--CCCCeeEEeeCCCEEEEEC-C-CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEEeCCCCCe
Q 023864 185 EFTH--QMKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQVWPC 258 (276)
Q Consensus 185 ~~~~--~~~EGWGLT~Dg~~L~vSD-G-S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyANvw~s~d~ 258 (276)
-+.. ..|.|..+.+++..||++| | ..+|+.+|++. +....+ +.. .+..+|.|.+. +++||..-+.. +.
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~-~~~---~l~~Pnglavd~~~~~lY~aD~~~-~~ 189 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFII-INS---EIYWPNGLTLDYEEQKLYWADAKL-NF 189 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEE-ECS---SCSCEEEEEEETTTTEEEEEETTT-TE
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEE-EEC---CCCCccEEEEeccCCEEEEEECCC-CE
Confidence 2222 2356666777789999999 6 68999999864 222222 221 25678999987 68999999999 99
Q ss_pred EEEEeCCC
Q 023864 259 IPYAYLQA 266 (276)
Q Consensus 259 I~vIDp~T 266 (276)
|.++|+..
T Consensus 190 I~~~d~dG 197 (318)
T 3sov_A 190 IHKSNLDG 197 (318)
T ss_dssp EEEEETTS
T ss_pred EEEEcCCC
Confidence 99999874
No 88
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.92 E-value=1.3e-07 Score=82.29 Aligned_cols=155 Identities=15% Similarity=0.128 Sum_probs=103.6
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec-CCC--ceEEEEEEe-CCEEEEEEe-----------
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGS--YFGEGLTLL-GEKLFQVTW----------- 167 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l-~~~--~FgEGit~~-g~~LyqlTw----------- 167 (276)
+.....||++++||+||.++. +...|.+||+++|++...... ... .+..+++++ +++||+.+.
T Consensus 67 ~~~~~~~l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 67 PSHHQNGHCLNKQGHLIACSH--GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY 144 (296)
T ss_dssp SCSSEEEEEECTTCCEEEEET--TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS
T ss_pred CCCCcceeeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc
Confidence 345668999999999998765 778999999999987544321 111 123357776 468999643
Q ss_pred ------eCCEEEEEeCCCCcEEEEEecC--CCCeeEEeeCCCEEEEEC-CCceEEEEcCC-CCcE-EEEEEeeeCCEeee
Q 023864 168 ------LQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKV-IRKDIVRYKGREVR 236 (276)
Q Consensus 168 ------k~~~v~V~D~~tlk~i~~~~~~--~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~-t~~v-i~~I~V~~~g~pv~ 236 (276)
..+.++.+|++ .+. ..+... .+.|..+++||+.| ++| +.++|+++|.+ ++++ ...-.... ...
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~---~~~ 218 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTV---EPG 218 (296)
T ss_dssp CCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECC---SSS
T ss_pred cccccCCCcEEEEECCC-CCE-EEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeC---CCC
Confidence 24689999987 333 333221 34677788999999 777 68899999986 6665 22111111 112
Q ss_pred eeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 237 NLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 237 ~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.++-|.+. +|.||+.. . +.|.++||+ |+.
T Consensus 219 ~p~~i~~d~~G~l~v~~--~-~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 219 KTDGLRVDAGGLIWASA--G-DGVHVLTPD-GDE 248 (296)
T ss_dssp CCCSEEEBTTSCEEEEE--T-TEEEEECTT-SCE
T ss_pred CCCeEEECCCCCEEEEc--C-CeEEEECCC-CCE
Confidence 33445554 78999888 6 889999998 454
No 89
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=3.9e-08 Score=93.56 Aligned_cols=151 Identities=11% Similarity=0.075 Sum_probs=107.4
Q ss_pred CceEEEEec--CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCC----EEEEEeC
Q 023864 106 FTQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQK----TGFIYDQ 177 (276)
Q Consensus 106 FTQGL~~~~--dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~----~v~V~D~ 177 (276)
..+||+++| ++.||.+.- + ..|+++|++++++......... +.||+++ +++||+.++.++ .++++++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~--~-~~I~~id~~~~~v~~~~~~~~~--P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE--Q-HPTRLIDFEKEYVSTVYSGLSK--VRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB--T-EEEEEEETTTTEEEEEECCCSC--EEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeC--C-CcEEEEECCCCEEEEEecCCCC--cceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 467999995 488998754 3 8999999999887665543334 5577776 467999999544 5677776
Q ss_pred CC-CcEEEEEe-cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEe
Q 023864 178 NN-LNKLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANV 252 (276)
Q Consensus 178 ~t-lk~i~~~~-~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANv 252 (276)
+. +.....+. ...+.|..+++++..||++| +.++|+.+|+++.+......+... ..++-|.+. +| +||+..
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~----~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS----GWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS----SCCEEEEECTTSSEEEEEE
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC----CcceeEEEcCCCCEEEEEE
Confidence 43 33122222 23468888888778899999 899999999998766433333322 245556665 55 499999
Q ss_pred CCCCCeEEEEeCCC
Q 023864 253 WQVWPCIPYAYLQA 266 (276)
Q Consensus 253 w~s~d~I~vIDp~T 266 (276)
+.. ++|.++|+..
T Consensus 289 ~~~-~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQ-HYILRSDYDW 301 (430)
T ss_dssp TTT-TEEEEEEEET
T ss_pred CCC-CEEEEEeCCc
Confidence 999 9999998763
No 90
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.91 E-value=2e-09 Score=108.96 Aligned_cols=158 Identities=11% Similarity=-0.014 Sum_probs=110.7
Q ss_pred CceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCCC-
Q 023864 106 FTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNNL- 180 (276)
Q Consensus 106 FTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~tl- 180 (276)
...||+++. +++||.+.. +...|.++|++...+...+..+ ...+.||+++ +++||...|.. +++.++|++.-
T Consensus 454 ~P~glavD~~~g~LY~tD~--~~~~I~v~d~dg~~~~~l~~~~-~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTLFREQ-GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp -CCCEECCCSSSBCEECCT--TTSCEEEEBSSSCCEEEECCCS-SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred CcceEEEEeeCCcEEEEec--cCCeEEEEecCCCceEEEEeCC-CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 357999984 478998744 7889999999876543332222 2234578885 68999999976 89999887532
Q ss_pred -cEEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCe
Q 023864 181 -NKLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPC 258 (276)
Q Consensus 181 -k~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~ 258 (276)
+.+..-....|.|.++++++++||++| +.++|+++|+...... .+ +.. +..+.++.-|.+..++||+..|.. +.
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~-~~-~~~-~~~~~~P~glavd~~~lywtd~~~-~~ 606 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TI-LED-EKRLAHPFSLAVFEDKVFWTDIIN-EA 606 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE-EE-CCC-SSSCSSCCCCEEETTEEEEECSTT-TC
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE-EE-Eec-CCcCCCceEeEEECCEEEEEeCCC-Ce
Confidence 233211223468888999999999999 6889999998753322 22 111 112234555678888999999999 99
Q ss_pred EEEEeCCCCcEE
Q 023864 259 IPYAYLQAFGSS 270 (276)
Q Consensus 259 I~vIDp~T~~v~ 270 (276)
|.+||+.+|+.+
T Consensus 607 V~~~d~~~G~~~ 618 (699)
T 1n7d_A 607 IFSANRLTGSDV 618 (699)
T ss_dssp EEEEETTTEEEE
T ss_pred EEEEEccCCCce
Confidence 999999996543
No 91
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.90 E-value=4.7e-08 Score=93.02 Aligned_cols=155 Identities=12% Similarity=0.031 Sum_probs=109.0
Q ss_pred ceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCC--Cc
Q 023864 107 TQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNN--LN 181 (276)
Q Consensus 107 TQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~t--lk 181 (276)
..|+++++ +|.||.+.- +..+|.++|++++++.....++...++.||+++ +++||++.+.++++.++|.+. .+
T Consensus 228 p~giavdp~~g~lyv~d~--~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~ 305 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW--NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKR 305 (430)
T ss_dssp CCCEEECTTTCCEEEEET--TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred ceEEEEeCCCCEEEEEEC--CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccc
Confidence 46999999 789998754 788999999998876555556655556688886 456999999999999988653 11
Q ss_pred --EEEEEec--C-------------CCCee-EEeeC---------CCEEEEEC-CCceEEEEcCCCCcEEEEEEeee---
Q 023864 182 --KLEEFTH--Q-------------MKDGW-GLATD---------GKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY--- 230 (276)
Q Consensus 182 --~i~~~~~--~-------------~~EGW-GLT~D---------g~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~--- 230 (276)
.+..+.- + ..... |++-+ ...||++| +.++|..+|+. +++....-.+.
T Consensus 306 ~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~-G~v~~~~g~g~~~~ 384 (430)
T 3tc9_A 306 LTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ-GRVTTFAGRGSNGT 384 (430)
T ss_dssp ECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT-SEEEEEEECCTTSS
T ss_pred ccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC-CcEEEEEeCCCCCC
Confidence 1222221 0 01123 45432 25899999 78999999964 65544443311
Q ss_pred ----CCE-----eeeeeeeeEEE--CCEEEEEeCCCCCeEEEEeCC
Q 023864 231 ----KGR-----EVRNLNELEFI--KGEVWANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 231 ----~g~-----pv~~lNELE~i--dG~lyANvw~s~d~I~vIDp~ 265 (276)
+|. .+..+..+.+. +|.||++.+.. ++|.+||++
T Consensus 385 ~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n-~rIr~i~~e 429 (430)
T 3tc9_A 385 SGYNDGDLRQEARFNHPEGIVYDEERECFFIGDREN-RRIRKIGYE 429 (430)
T ss_dssp SSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG-TEEEEEEEC
T ss_pred CcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCC-CeEEEEccC
Confidence 221 25567888888 58999999999 999999986
No 92
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.90 E-value=5.8e-07 Score=78.99 Aligned_cols=163 Identities=13% Similarity=0.097 Sum_probs=111.7
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeC-
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQ- 169 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~- 169 (276)
.-+-+..++. ...+.+|+.|++||+||.+.. ....|.+||++++++..... .......+++++ +++||+.+..+
T Consensus 33 ~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~-~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 33 TAEPWLEISK-KGLQLEGLNFDRQGQLFLLDV--FEGNIFKINPETKEIKRPFV-SHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp ECEEEEEEES-SCCCEEEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEE-CSSSSEEEEEECTTSCEEEEECTTS
T ss_pred ccceeEEEec-cCccccCcEECCCCCEEEEEC--CCCEEEEEeCCCCcEEEEee-CCCCCcceEEECCCCcEEEEeCCCC
Confidence 4445555554 456779999999999998644 45689999999998765432 222345688886 56899999877
Q ss_pred ---CEEEEEeCCCCcEEEEEec--C--CCCeeEEeeCCCEEEEECC-------CceEEEEcCCCCcEEEEEEeeeCCEee
Q 023864 170 ---KTGFIYDQNNLNKLEEFTH--Q--MKDGWGLATDGKVLFGSDG-------SSMLYQIDPQTLKVIRKDIVRYKGREV 235 (276)
Q Consensus 170 ---~~v~V~D~~tlk~i~~~~~--~--~~EGWGLT~Dg~~L~vSDG-------S~~L~viDp~t~~vi~~I~V~~~g~pv 235 (276)
+.+++||+++.+....+.. . .+.+..+.+||+ +|+++. ...|+.+|+++.++..... ..
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~ 181 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ------NI 181 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEEEE------EE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEeec------CC
Confidence 7999999988776433321 1 122334556664 666653 4789999998876543221 12
Q ss_pred eeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCC
Q 023864 236 RNLNELEFI-KG-EVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 236 ~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T 266 (276)
..+|.+.+. || .||+..... +.|.++|+++
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~~-~~i~~~d~~~ 213 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETTA-NRLHRIALED 213 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGGG-TEEEEEEECT
T ss_pred CcccceEECCCCCEEEEEeCCC-CeEEEEEecC
Confidence 345667665 55 599888778 8999999975
No 93
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.89 E-value=1e-07 Score=98.30 Aligned_cols=155 Identities=8% Similarity=0.036 Sum_probs=110.4
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcE--EEEeecC-CCceEEEEEEe--CCEEEEEEeeCCEEEEEeCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKV--EAINQME-GSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv--~~~~~l~-~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~ 178 (276)
....||.|+. +++||.+.. +...|++++++.... .....+. .-..++||+++ +++||...+..+++.++|++
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~--~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SSEEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEeecccCCeeEEeec--cceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 4457999997 478999865 778999999986321 1111222 22346688887 67999999999999999998
Q ss_pred CCcEEEEEec--CCCCeeEEeeCCCEEEEEC-CC-ceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEEe
Q 023864 179 NLNKLEEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANV 252 (276)
Q Consensus 179 tlk~i~~~~~--~~~EGWGLT~Dg~~L~vSD-GS-~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyANv 252 (276)
......-+.. ..|.|.++.+.+.+||++| |. .+|.++|++.......+.. .+..+|-|.+. +|+||+.-
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~-----~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-----NIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS-----SCSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC-----CCCCceEEEEecCCCeEEEEe
Confidence 6554333332 2467777888899999999 75 8999999875443322221 24577888877 78999999
Q ss_pred CCCCCeEEEEeCCCC
Q 023864 253 WQVWPCIPYAYLQAF 267 (276)
Q Consensus 253 w~s~d~I~vIDp~T~ 267 (276)
+.. +.|.++|+...
T Consensus 577 ~~~-~~I~~~d~dG~ 590 (791)
T 3m0c_C 577 SKL-HSISSIDVNGG 590 (791)
T ss_dssp TTT-TEEEEEETTSC
T ss_pred CCC-CcEEEEecCCC
Confidence 999 99999999653
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.89 E-value=9.3e-08 Score=86.56 Aligned_cols=167 Identities=8% Similarity=0.018 Sum_probs=105.1
Q ss_pred eEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCC-CCcEEEEee--cCCCceEEEEEEe--CCEEEE--
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE-TGKVEAINQ--MEGSYFGEGLTLL--GEKLFQ-- 164 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~-tgkv~~~~~--l~~~~FgEGit~~--g~~Lyq-- 164 (276)
.+.+...+.....-..++.|++||+ ||.+.. + .|..||++ +|++..... .+..+. ++++. |++||+
T Consensus 28 l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~--~--~v~~~~~~~~g~~~~~~~~~~~g~~~--~~~~spdg~~l~~~~ 101 (365)
T 1jof_A 28 CKLIKRTEIPQDEPISWMTFDHERKNIYGAAM--K--KWSSFAVKSPTEIVHEASHPIGGHPR--ANDADTNTRAIFLLA 101 (365)
T ss_dssp EEEEEEEECCTTCCCSEEEECTTSSEEEEEEB--T--EEEEEEEEETTEEEEEEEEECCSSGG--GGCTTSCCEEEEEEE
T ss_pred EEEeeEEccCCCCCCcEEEECCCCCEEEEEcc--c--eEEEEEECCCCCEEEeeEeecCCCCc--cEEECCCCCEEEEEE
Confidence 3455555433233456899999986 775432 4 89999997 888754432 222222 24443 444444
Q ss_pred EE------e------eCCEEEEEeCC-CCcEEEEEe---cC---CCCeeEEeeCCCEEEEEC-CCceEEEEcCC-CCcEE
Q 023864 165 VT------W------LQKTGFIYDQN-NLNKLEEFT---HQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKVI 223 (276)
Q Consensus 165 lT------w------k~~~v~V~D~~-tlk~i~~~~---~~---~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~-t~~vi 223 (276)
.+ + .++.+.+||.+ +.+...++. ++ .+.+..+++||++||++| |.++|+++|.+ +++..
T Consensus 102 ~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 102 AKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp CSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred ecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 32 2 57889999986 456554443 11 345666889999999998 78999999988 77654
Q ss_pred --EEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEE--eCCCCcE
Q 023864 224 --RKDIVRYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYA--YLQAFGS 269 (276)
Q Consensus 224 --~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vI--Dp~T~~v 269 (276)
..+.+...|. .+..+.+. || +||+....+ +.|.++ |+++|+.
T Consensus 182 ~~~~~~~~~~g~---~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 182 LVGSVDAPDPGD---HPRWVAMHPTGNYLYALMEAG-NRICEYVIDPATHMP 229 (365)
T ss_dssp EEEEEECSSTTC---CEEEEEECTTSSEEEEEETTT-TEEEEEEECTTTCCE
T ss_pred EeeeEecCCCCC---CCCEeEECCCCCEEEEEECCC-CeEEEEEEeCCCCcE
Confidence 2333211121 23445565 56 699998888 888886 5567764
No 95
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.88 E-value=7.9e-07 Score=80.38 Aligned_cols=172 Identities=10% Similarity=0.156 Sum_probs=117.8
Q ss_pred eeeEEE-EEEecCCCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEe
Q 023864 91 YTIQVV-NEFPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTW 167 (276)
Q Consensus 91 ~t~~Vv-~~~Phd~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTw 167 (276)
|.+.+. +.+|--... ..||+++++ ++||..+. +...|.++|+. |+++++++++...=.|||++.+ +++|++..
T Consensus 13 y~~~~~~~~l~g~~~~-lSGla~~~~~~~L~aV~d--~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E 88 (255)
T 3qqz_A 13 YHATIDGKEIAGITNN-ISSLTWSAQSNTLFSTIN--KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE 88 (255)
T ss_dssp CEEEEEEEECTTCCSC-EEEEEEETTTTEEEEEEE--TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET
T ss_pred eEEEEeceECCCcccC-cceeEEeCCCCEEEEEEC--CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC
Confidence 444444 344433334 479999986 68998666 68899999998 9999999987533379999986 56667778
Q ss_pred eCCEEEEEeCCCCc---EEEEEecC---CC-----CeeEEeeCCCEEEEEC-CCc-eEEEEc--CCC--CcEEEEEEeee
Q 023864 168 LQKTGFIYDQNNLN---KLEEFTHQ---MK-----DGWGLATDGKVLFGSD-GSS-MLYQID--PQT--LKVIRKDIVRY 230 (276)
Q Consensus 168 k~~~v~V~D~~tlk---~i~~~~~~---~~-----EGWGLT~Dg~~L~vSD-GS~-~L~viD--p~t--~~vi~~I~V~~ 230 (276)
+++++++|+..... .+.++..+ .+ ||.+..+++++||++. .+. .|+.+| +.+ +++...-.. .
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~-~ 167 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKAL-Q 167 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHH-H
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhh-c
Confidence 88999999865433 34555432 23 8888888999999977 344 788888 222 222110000 0
Q ss_pred CCEeeeeeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 231 KGREVRNLNELEFI--KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 231 ~g~pv~~lNELE~i--dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
+...+..+-.|.+. .|++|+-.-.+ +.++++|++. ++
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s-~~L~~~d~~g-~~ 206 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHES-RALQEVTLVG-EV 206 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTT-TEEEEECTTC-CE
T ss_pred cccccCCceeEEEcCCCCeEEEEECCC-CeEEEEcCCC-CE
Confidence 12233445556666 57899999889 9999999885 53
No 96
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.87 E-value=1.1e-07 Score=95.12 Aligned_cols=154 Identities=8% Similarity=0.031 Sum_probs=107.8
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcE--EEEeecCCCceEEEEEEe--CCEEEEEEee-CCEEEEEeCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKV--EAINQMEGSYFGEGLTLL--GEKLFQVTWL-QKTGFIYDQN 178 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv--~~~~~l~~~~FgEGit~~--g~~LyqlTwk-~~~v~V~D~~ 178 (276)
...+||+++. +++||.+.. +...|.++|++.... +....+ ..|. ||+++ ++.||..+|. ..++...+.+
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~--~~~~I~v~~~dG~~~~~l~~~~l-~~P~--~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDS--ETNRIEVSNLDGSLRKVLFWQEL-DQPR--AIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSC-SCCC--CEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCeEEEEecCCEEEEEeC--CCCEEEEEECCCCCEEEEEeCCC-CCCc--eEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 4578999997 478998754 889999999986532 221122 2444 77885 5899999997 5789999876
Q ss_pred CCc--EEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCC
Q 023864 179 NLN--KLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQV 255 (276)
Q Consensus 179 tlk--~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s 255 (276)
.-. .+..-....|.|.++.++++.||++| +.++|+.+|.+..... .+.-+. ..++.-|.+.+++||+..|.+
T Consensus 159 G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~-~~~~~~----~~~P~gi~~~~~~ly~td~~~ 233 (619)
T 3s94_A 159 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-AVVKGS----LPHPFALTLFEDILYWTDWST 233 (619)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC--------------CCCEEESSSEEEEECTTT
T ss_pred CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccE-EEEeCC----CCCceEEEEeCCEEEEecCCC
Confidence 432 22211222456777778899999999 6899999999764332 221111 235556778888999999999
Q ss_pred CCeEEEEeCCCCcE
Q 023864 256 WPCIPYAYLQAFGS 269 (276)
Q Consensus 256 ~d~I~vIDp~T~~v 269 (276)
+.|.+||..||+.
T Consensus 234 -~~V~~~d~~tg~~ 246 (619)
T 3s94_A 234 -HSILACNKYTGEG 246 (619)
T ss_dssp -CSEEEEESSSCCC
T ss_pred -CEEEEEECCCCcc
Confidence 9999999999764
No 97
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.80 E-value=9.4e-08 Score=85.22 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=87.0
Q ss_pred CCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeec---CC-CceEEEEEEe--CCEEEEEEee-CCEEEEE
Q 023864 104 RAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQM---EG-SYFGEGLTLL--GEKLFQVTWL-QKTGFIY 175 (276)
Q Consensus 104 ~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l---~~-~~FgEGit~~--g~~LyqlTwk-~~~v~V~ 175 (276)
.....++.|+|||+ ||.+.. +.+.|.+||+++|++.....+ +. .....++++. ++.||+.+.. ++.+.+|
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~ 287 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINE--IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIF 287 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEET--TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcC--CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEE
Confidence 44456999999985 787643 678899999999876443322 21 1223466664 5689999988 8999998
Q ss_pred eCC----CCcEEEEEecC-CCCeeEEeeCCCEEEEEC-CCceEEE--EcCCCCcEEEE
Q 023864 176 DQN----NLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQ--IDPQTLKVIRK 225 (276)
Q Consensus 176 D~~----tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~v--iDp~t~~vi~~ 225 (276)
|.+ +++.+..++.+ .+.+..+++||++||+++ .++.|.+ +|++++++...
T Consensus 288 ~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred EEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 874 44577777653 356777899999999988 5777777 89999887543
No 98
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.78 E-value=1.4e-07 Score=89.95 Aligned_cols=148 Identities=12% Similarity=0.135 Sum_probs=103.3
Q ss_pred CceEEEEecC---CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeC---CE-EEEEeC
Q 023864 106 FTQGLLYAEN---DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQ---KT-GFIYDQ 177 (276)
Q Consensus 106 FTQGL~~~~d---g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~---~~-v~V~D~ 177 (276)
..+||+++++ |.||.+.. + ..|+++|+++|++..... ....+.|++++. ++||+..+.+ .. ++.++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~--~-~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQ--R-DAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECB--T-SCEEEEETTTTEEEEECC--CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeC--C-CCEEEEECCCCEEEEeec--CCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC
Confidence 3579999974 89999755 4 899999999998865543 333466888863 4599999843 23 455554
Q ss_pred CC-Cc---EEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEE-EeeeCCEeeeeeeeeEEE-CC-EEE
Q 023864 178 NN-LN---KLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKD-IVRYKGREVRNLNELEFI-KG-EVW 249 (276)
Q Consensus 178 ~t-lk---~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I-~V~~~g~pv~~lNELE~i-dG-~ly 249 (276)
.. +. .+..+ ..+.|..+.+++..||++| +.++|+.+|++++++...+ .++..+ ..+-|.+. +| +||
T Consensus 215 ~~~~~~~~~~~~~--~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~----~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 215 ASGFTERLSLCNA--RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKG----SNFHIVWHPTGDWAY 288 (433)
T ss_dssp GGTTCCEEEEEEC--SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCS----SCEEEEECTTSSEEE
T ss_pred CCCeecccccccc--CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCC----CcccEEEeCCCCEEE
Confidence 32 22 22222 2457888888778999999 7889999999988874433 333211 12235565 45 699
Q ss_pred EEeCCCCCeEEEEeCC
Q 023864 250 ANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 250 ANvw~s~d~I~vIDp~ 265 (276)
+..+.. ++|.+||+.
T Consensus 289 vad~~~-~~I~~~~~d 303 (433)
T 4hw6_A 289 IIYNGK-HCIYRVDYN 303 (433)
T ss_dssp EEETTT-TEEEEEEBC
T ss_pred EEeCCC-CEEEEEeCC
Confidence 999999 999999865
No 99
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.75 E-value=2e-06 Score=73.85 Aligned_cols=165 Identities=11% Similarity=-0.002 Sum_probs=114.8
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~ 173 (276)
.+..+.. .......+.|++++.++.+++ .+..|+.||+++++......-... -...+++.. ++.+...-.++.+.
T Consensus 133 ~~~~~~~-~~~~i~~~~~~~~~~~l~~~~--~dg~v~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~i~ 208 (337)
T 1gxr_A 133 IKAELTS-SAPACYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTD-GASCIDISNDGTKLWTGGLDNTVR 208 (337)
T ss_dssp EEEEEEC-SSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeeeccc-CCCceEEEEECCCCCEEEEEe--CCCcEEEEeCCCCceeeeeecccC-ceEEEEECCCCCEEEEEecCCcEE
Confidence 3444443 344457999999887666555 567899999999998777654332 234566653 44455555789999
Q ss_pred EEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEE
Q 023864 174 IYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWAN 251 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyAN 251 (276)
+||..+.+.+..+..+ ......+++||+.|+++.....|.++|..+.+... ...... .++.+.+. +|..++.
T Consensus 209 ~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~---~~~~~~---~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 209 SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ---LHLHES---CVLSLKFAYCGKWFVS 282 (337)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE---ECCCSS---CEEEEEECTTSSEEEE
T ss_pred EEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE---EcCCcc---ceeEEEECCCCCEEEE
Confidence 9999999999998765 12334467899999998878899999999887542 222122 34455666 5655555
Q ss_pred eCCCCCeEEEEeCCCCcEE
Q 023864 252 VWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 252 vw~s~d~I~vIDp~T~~v~ 270 (276)
.-.+ ..|.+.|.++++..
T Consensus 283 ~~~d-g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 283 TGKD-NLLNAWRTPYGASI 300 (337)
T ss_dssp EETT-SEEEEEETTTCCEE
T ss_pred ecCC-CcEEEEECCCCeEE
Confidence 5566 89999999997765
No 100
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.75 E-value=2.8e-06 Score=74.94 Aligned_cols=151 Identities=13% Similarity=0.013 Sum_probs=104.3
Q ss_pred CCCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCC
Q 023864 102 DPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNN 179 (276)
Q Consensus 102 d~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~t 179 (276)
....|.+|..|+++ +.||.+.- ....|++||++++++ ....++.. ..+++++ +++||+.+ ++.+++||+++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~--~~~~i~~~d~~~~~~-~~~~~~~~--~~~i~~~~dG~l~v~~--~~~l~~~d~~~ 82 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDI--PAKKVCRWDSFTKQV-QRVTMDAP--VSSVALRQSGGYVATI--GTKFCALNWKE 82 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCE-EEEECSSC--EEEEEEBTTSSEEEEE--TTEEEEEETTT
T ss_pred cCCccccCCeEECCCCEEEEEEC--CCCEEEEEECCCCcE-EEEeCCCc--eEEEEECCCCCEEEEE--CCeEEEEECCC
Confidence 46789999999985 78888754 678999999999987 44556655 4467776 45688887 78999999987
Q ss_pred CcEEEEEecC------CCCeeEEeeCCCEEEEEC------------CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeee
Q 023864 180 LNKLEEFTHQ------MKDGWGLATDGKVLFGSD------------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (276)
Q Consensus 180 lk~i~~~~~~------~~EGWGLT~Dg~~L~vSD------------GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNEL 241 (276)
.+...-.... .+.+..+.+||+ +|+++ ....|+.+|+. .++..... .+...|.+
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~------~~~~pngi 154 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD------QVDISNGL 154 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE------EESBEEEE
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCEEEEee------ccccccce
Confidence 6543222211 012234567777 77765 24589999986 44433211 23467888
Q ss_pred EEE-CC-EEEEEeCCCCCeEEEEeC--CCCc
Q 023864 242 EFI-KG-EVWANVWQVWPCIPYAYL--QAFG 268 (276)
Q Consensus 242 E~i-dG-~lyANvw~s~d~I~vIDp--~T~~ 268 (276)
.+. || .||+..-.. +.|.++|. ++|.
T Consensus 155 ~~spdg~~lyv~~~~~-~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLS-YSVDAFDYDLQTGQ 184 (297)
T ss_dssp EECTTSCEEEEEEGGG-TEEEEEEECTTTCC
T ss_pred EEcCCCCEEEEecCCC-CcEEEEeccCCCCc
Confidence 886 45 599888788 99999975 6664
No 101
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.75 E-value=1.2e-06 Score=87.70 Aligned_cols=154 Identities=8% Similarity=-0.087 Sum_probs=110.5
Q ss_pred CceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCC--EEEEEeCCCC
Q 023864 106 FTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQK--TGFIYDQNNL 180 (276)
Q Consensus 106 FTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~--~v~V~D~~tl 180 (276)
..+||+++.. +.||.+.. +.+.|.+.+++ |+....+....-.-+-||+++ ++.||...|..+ ++...+++.-
T Consensus 390 ~p~glAvD~~~~nLY~td~--~~~~I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~ 466 (628)
T 4a0p_A 390 QPYDLSIDIYSRYIYWTCE--ATNVINVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT 466 (628)
T ss_dssp CEEEEEEETTTTEEEEEET--TTTEEEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC
T ss_pred CcceEEeeccCCeEEEEcC--CCCEEEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC
Confidence 4579999976 67998754 88899999996 655444322222336789998 589999999987 7899888644
Q ss_pred cEEEEEe--cCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCC
Q 023864 181 NKLEEFT--HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWP 257 (276)
Q Consensus 181 k~i~~~~--~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d 257 (276)
....-+. ...|.|..+.++++.||++| +.+.|..+|.+. +-.+.+.-.. ..++--|...+|+||..-|.. +
T Consensus 467 ~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG-~~r~~~~~~~----~~~P~glav~~~~ly~tD~~~-~ 540 (628)
T 4a0p_A 467 EREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSG-ANRIVLEDSN----ILQPVGLTVFENWLYWIDKQQ-Q 540 (628)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSS----CSCEEEEEEETTEEEEEETTT-T
T ss_pred CcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCC-CceEEEEcCC----CCCcEEEEEECCEEEEEECCC-C
Confidence 3322222 22345666667789999999 689999999854 3333332222 234455778899999999999 9
Q ss_pred eEEEEeCCCCc
Q 023864 258 CIPYAYLQAFG 268 (276)
Q Consensus 258 ~I~vIDp~T~~ 268 (276)
.|.++|..||+
T Consensus 541 ~i~~~~k~~G~ 551 (628)
T 4a0p_A 541 MIEKIDMTGRE 551 (628)
T ss_dssp EEEEEETTSSS
T ss_pred eEEEEECcCCC
Confidence 99999999876
No 102
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=1.7e-07 Score=92.43 Aligned_cols=150 Identities=9% Similarity=0.110 Sum_probs=107.1
Q ss_pred ceEEEEec--CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCce--EEEEEE---------eCCEEEEEEeeCC---
Q 023864 107 TQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYF--GEGLTL---------LGEKLFQVTWLQK--- 170 (276)
Q Consensus 107 TQGL~~~~--dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~F--gEGit~---------~g~~LyqlTwk~~--- 170 (276)
..||+|+| +++||.+-. +...|+++|++++++......+...| +-+|++ .+++||+.+|.++
T Consensus 141 p~~la~dp~~~~~Lyv~~~--~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYD--GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEE--TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEEC--CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 45999997 378998755 56789999999999877666654222 445655 5678999999973
Q ss_pred ---EEEEEeCCC---C------cEEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCC-------CCcE--------
Q 023864 171 ---TGFIYDQNN---L------NKLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-------TLKV-------- 222 (276)
Q Consensus 171 ---~v~V~D~~t---l------k~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~-------t~~v-------- 222 (276)
.++++|++. + +.+.++. .+.|..+.+++++||++| +.++|+.+|++ +.++
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYK--QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEES--CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred cCceEEEEecCCCCceeecccceeeccCC--CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 488898655 3 2344333 457888888899999999 78899999998 6654
Q ss_pred ---EEE-EEeeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCC
Q 023864 223 ---IRK-DIVRYKGREVRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQ 265 (276)
Q Consensus 223 ---i~~-I~V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~ 265 (276)
.+. ..+...+.| .-|.+. +| .||+.-+.. ++|.+||+.
T Consensus 297 ~g~~~~l~~~~~~~~p----~~ia~~p~G~~lYvaD~~~-h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTIADPSWE----FQIFIHPTGKYAYFGVINN-HYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEECSSSSCC----EEEEECTTSSEEEEEETTT-TEEEEEEEE
T ss_pred ccccceeEecCCCCCc----eEEEEcCCCCEEEEEeCCC-CEEEEEecC
Confidence 233 344433333 234454 45 599999999 999997763
No 103
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.73 E-value=4.9e-07 Score=79.96 Aligned_cols=158 Identities=11% Similarity=0.069 Sum_probs=101.5
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEee-cCCC--ceEEEEEEe-CCEEEEEE-----e------
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ-MEGS--YFGEGLTLL-GEKLFQVT-----W------ 167 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~-l~~~--~FgEGit~~-g~~LyqlT-----w------ 167 (276)
+..+..|+.+++||+||.++. +...|.++|++ |++..... .+.. .....++++ ++++|..+ .
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~--~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEH--GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred CCCccceeeECCCCCEEEEEC--CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence 356678999999999998754 77899999997 76543321 1111 112356776 47899853 1
Q ss_pred ------eCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCC------ceEEEEcCCCCcEEEEEEeeeCCEee
Q 023864 168 ------LQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGS------SMLYQIDPQTLKVIRKDIVRYKGREV 235 (276)
Q Consensus 168 ------k~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS------~~L~viDp~t~~vi~~I~V~~~g~pv 235 (276)
..+.++.+|+++.+...-.....+.|..+++||+.||++|.. +.|+++|.++.. +....+-... +-
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-~~ 238 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-PD 238 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-SS
T ss_pred ccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-CC
Confidence 136899999976554322133345788889999999999853 799999987654 2222221100 11
Q ss_pred eeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 236 RNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 236 ~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
..++-|.+. +|.||+..+ +.|.++||+ |+.
T Consensus 239 ~~pdgi~~d~~G~lwv~~~---~gv~~~~~~-g~~ 269 (305)
T 3dr2_A 239 GLPDGFCVDRGGWLWSSSG---TGVCVFDSD-GQL 269 (305)
T ss_dssp SCCCSEEECTTSCEEECCS---SEEEEECTT-SCE
T ss_pred CCCCeEEECCCCCEEEecC---CcEEEECCC-CCE
Confidence 123445554 688998873 679999995 354
No 104
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.72 E-value=1.8e-06 Score=86.27 Aligned_cols=156 Identities=12% Similarity=0.088 Sum_probs=109.8
Q ss_pred CCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC-CEEEEEeCCCC
Q 023864 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~-~~v~V~D~~tl 180 (276)
...+||+++. ++.||.+.. +...|.+.+++.... ..+.-..-.-+.||+++ ++.||...|.+ .++...+.+.-
T Consensus 392 ~~p~GlAvD~~~~~lY~tD~--~~~~I~v~~~~G~~~-~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~ 468 (619)
T 3s94_A 392 AHPDGIAVDWVARNLYWTDT--GTDRIEVTRLNGTMR-KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS 468 (619)
T ss_dssp SCCCEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcCceEEecccCcEEEEeC--CCCcEEEEeCCCCeE-EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC
Confidence 3557999995 578999855 889999999986532 22211122346788998 58999999976 78988887543
Q ss_pred c--EEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCC
Q 023864 181 N--KLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWP 257 (276)
Q Consensus 181 k--~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d 257 (276)
. .+..-....|.|.++.+++++||++| +.++|..+|++... .+.+.-.. +.++--|...+++||..-|.. +
T Consensus 469 ~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~----l~~P~glav~~~~ly~tD~~~-~ 542 (619)
T 3s94_A 469 DRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTG-RRVLVEDK----IPHIFGFTLLGDYVYWTDWQR-R 542 (619)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEEECC----CCSSCCEEEETTEEEEECTTS-S
T ss_pred ccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCc-eEEEeccC----CCCcEEEEEECCEEEEeecCC-C
Confidence 2 22211122456777778899999999 68899999986433 33332221 223445678899999999999 9
Q ss_pred eEEEEeCCCCcE
Q 023864 258 CIPYAYLQAFGS 269 (276)
Q Consensus 258 ~I~vIDp~T~~v 269 (276)
.|.++|..||..
T Consensus 543 ~I~~~~k~~g~~ 554 (619)
T 3s94_A 543 SIERVHKRSAER 554 (619)
T ss_dssp CEEEEESSSCCE
T ss_pred eEEEEEcCCCce
Confidence 999999999854
No 105
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.72 E-value=1.6e-06 Score=76.95 Aligned_cols=160 Identities=14% Similarity=0.093 Sum_probs=113.0
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec-------CCCceEEEEEEeC-CEEEEEEeeC---CE
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-------EGSYFGEGLTLLG-EKLFQVTWLQ---KT 171 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l-------~~~~FgEGit~~g-~~LyqlTwk~---~~ 171 (276)
.......+.|++++ ++.+++ .+..|+.||+.+++.+..... ... -..+++.. ++++...-.+ +.
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~--i~~i~~~~~~~~l~~~~~d~~~g~ 259 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNS--IRSVKFSPQGSLLAIAHDSNSFGC 259 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCC--EEEEEECSSTTEEEEEEEETTEEE
T ss_pred CCCCceEEEECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCc--cceEEECCCCCEEEEEecCCCCce
Confidence 35556799999999 766655 678899999999998888775 333 34566642 3444444455 89
Q ss_pred EEEEeCCCCcEEEEEec-------------CCCC--eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeC--CE-
Q 023864 172 GFIYDQNNLNKLEEFTH-------------QMKD--GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--GR- 233 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~-------------~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~--g~- 233 (276)
+.+||..+.+.+.++.. .... ...+++||+.|+....+..|.++|..+++.+.++..... ++
T Consensus 260 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1sq9_A 260 ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIE 339 (397)
T ss_dssp EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSG
T ss_pred EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccch
Confidence 99999999999998874 2122 233567899998887888999999999999988873210 00
Q ss_pred -------e------eeeeeeeEEEC-C----------EEEEEeCCCCCeEEEEeCCCCc
Q 023864 234 -------E------VRNLNELEFIK-G----------EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 234 -------p------v~~lNELE~id-G----------~lyANvw~s~d~I~vIDp~T~~ 268 (276)
. -..++.+.+.. | .+++..-.+ ..|.+.|.++|+
T Consensus 340 ~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d-g~i~iw~~~~g~ 397 (397)
T 1sq9_A 340 EDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD-RSIRWFREAGGK 397 (397)
T ss_dssp GGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT-TEEEEEEEEC--
T ss_pred hhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC-CcEEEEEcCCCC
Confidence 0 23466677774 3 566666566 899999988863
No 106
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.71 E-value=5.4e-06 Score=75.67 Aligned_cols=170 Identities=9% Similarity=0.045 Sum_probs=119.2
Q ss_pred ceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-----------------Cce
Q 023864 89 SIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-----------------SYF 151 (276)
Q Consensus 89 ~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-----------------~~F 151 (276)
.....++.+.+.|. ..+..+.|+|||+++.+ | .+..+++||..+|+.+....-.. ..+
T Consensus 51 ~~~~~~~~~~~~h~--~~V~~v~fspdg~~la~-g--~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 125 (393)
T 1erj_A 51 REIDVELHKSLDHT--SVVCCVKFSNDGEYLAT-G--CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 125 (393)
T ss_dssp CCEEEEEEEEEECS--SCCCEEEECTTSSEEEE-E--CBSCEEEEETTTCCEEEEECC-----------------CCCCB
T ss_pred cccCceeEEecCCC--CEEEEEEECCCCCEEEE-E--cCCcEEEEEecCCCEEEEecCccccccccccccccccCCCcee
Confidence 34566778888884 44569999999987664 4 34689999999999876653221 112
Q ss_pred EEEEEEe-CCEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCCe--eEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEe
Q 023864 152 GEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDG--WGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (276)
Q Consensus 152 gEGit~~-g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~EG--WGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V 228 (276)
-..+++. ++++....-.++.+.+||..+.+.+..+.-....- ..+.+||+.|+....+..|.++|.++.+....+..
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 3456665 34555566678999999999999988886321222 33568999998877888999999999988777664
Q ss_pred eeCCEeeeeeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 229 RYKGREVRNLNELEFI--KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 229 ~~~g~pv~~lNELE~i--dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.. .+.-+.+. +|.++|..-.+ ..|.+.|.++++.+
T Consensus 206 ~~------~v~~~~~~~~~~~~l~~~s~d-~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 206 ED------GVTTVAVSPGDGKYIAAGSLD-RAVRVWDSETGFLV 242 (393)
T ss_dssp SS------CEEEEEECSTTCCEEEEEETT-SCEEEEETTTCCEE
T ss_pred CC------CcEEEEEECCCCCEEEEEcCC-CcEEEEECCCCcEE
Confidence 42 23334454 67766666566 88999999886643
No 107
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.70 E-value=8.6e-07 Score=77.13 Aligned_cols=148 Identities=18% Similarity=0.175 Sum_probs=103.0
Q ss_pred CceEEEEecCCEEEEEcCCC---------------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeC
Q 023864 106 FTQGLLYAENDTLFESTGLY---------------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQ 169 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~y---------------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~ 169 (276)
+..++.+++||+||.+...| +...|.++|.+ |++... .....++.|+++.. +++++..-.+
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~--~~~~~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP--IRDRVKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE--ECCCSSEEEEEECTTSCEEEEETTT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe--ecCCCCCccEEECCCCCEEEEeCCC
Confidence 44689999999999964322 24589999988 776433 23344567888863 3444777788
Q ss_pred CEEEEEeCC-CCcE---EEEEe--cCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEE
Q 023864 170 KTGFIYDQN-NLNK---LEEFT--HQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (276)
Q Consensus 170 ~~v~V~D~~-tlk~---i~~~~--~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~ 243 (276)
+.+.+||.+ +.+. ...+. ...+.|..+.+||. ||+++ .+.|.++||+ .+.+.++.+... ++.+.+
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~-~~~v~~~~~~-g~~~~~~~~~~~------~~~~~f 263 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA-GDGVHVLTPD-GDELGRVLTPQT------TSNLCF 263 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE-TTEEEEECTT-SCEEEEEECSSC------CCEEEE
T ss_pred CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc-CCeEEEECCC-CCEEEEEECCCC------ceeEEE
Confidence 999999976 4443 33331 11356777778885 88887 7899999997 778777776542 344556
Q ss_pred E--CC-EEEEEeCCCCCeEEEEeCCCCc
Q 023864 244 I--KG-EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 244 i--dG-~lyANvw~s~d~I~vIDp~T~~ 268 (276)
. || .||+.. . +.+.++|+++.+
T Consensus 264 ~~~d~~~L~v~t--~-~~l~~~~~~~~~ 288 (296)
T 3e5z_A 264 GGPEGRTLYMTV--S-TEFWSIETNVRG 288 (296)
T ss_dssp ESTTSCEEEEEE--T-TEEEEEECSCCB
T ss_pred ECCCCCEEEEEc--C-CeEEEEEccccc
Confidence 3 33 699887 3 789999999965
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.68 E-value=2.7e-06 Score=78.69 Aligned_cols=157 Identities=6% Similarity=-0.070 Sum_probs=111.7
Q ss_pred CCceEEEEecC---CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCc
Q 023864 105 AFTQGLLYAEN---DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 105 aFTQGL~~~~d---g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
.....+.|++| ++++.+++ .+..|++||+.+++.+.....+....-..+++.++++++..-.++.+.+||..+.+
T Consensus 196 ~~v~~~~~sp~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 196 SMLTDVHLIKDSDGHQFIITSD--RDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp SCEEEEEEEECTTSCEEEEEEE--TTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCC
T ss_pred CceEEEEEcCCCCCCcEEEEEc--CCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCc
Confidence 44578999999 88777776 56899999999998776644343333445555444444455588999999999999
Q ss_pred EEEEEecC---------------------------CCCeeEEeeCCCEEEEEC-CCceEEEEcC--CCC---cEEEEEEe
Q 023864 182 KLEEFTHQ---------------------------MKDGWGLATDGKVLFGSD-GSSMLYQIDP--QTL---KVIRKDIV 228 (276)
Q Consensus 182 ~i~~~~~~---------------------------~~EGWGLT~Dg~~L~vSD-GS~~L~viDp--~t~---~vi~~I~V 228 (276)
.+.+++.. .-.+....+||+.|+++. +...|.++|. .+. +.+..+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~ 353 (450)
T 2vdu_B 274 NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITF 353 (450)
T ss_dssp EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEEC
T ss_pred EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEecc
Confidence 99988631 011334567899999876 7899999998 444 55555554
Q ss_pred eeCCEeeeeeeeeEEECCEEEEEeCCCCC---------eEEEEeCCCCcEE
Q 023864 229 RYKGREVRNLNELEFIKGEVWANVWQVWP---------CIPYAYLQAFGSS 270 (276)
Q Consensus 229 ~~~g~pv~~lNELE~idG~lyANvw~s~d---------~I~vIDp~T~~v~ 270 (276)
. ..+..+.+..+.+|+.+-.. + .|..+|.++++..
T Consensus 354 ~------~~v~~~~~~~~~~~v~~~~~-~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 354 P------YNVISLSAHNDEFQVTLDNK-ESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp S------SCEEEEEEETTEEEEEECCT-TCCSSCCCSEEEEEEETTTTEEE
T ss_pred C------CceEEEEecCCcEEEEEecc-cCCCCCCcceEEEEEEcCCCeEE
Confidence 3 24566778888888777543 3 8888899887643
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.67 E-value=2.8e-06 Score=73.70 Aligned_cols=167 Identities=8% Similarity=-0.079 Sum_probs=110.2
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCcE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNK 182 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk~ 182 (276)
..-+..+.|++||.++.+++ .+..|++||+.+++.+....-... --..+++.. +++++..-.++.+.+||..+.+.
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCS--KDSSASVWYSLNGERLGTLDGHTG-TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEE--SSSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eceEEEEEEcCCCCEEEEEe--CCCEEEEEeCCCchhhhhhhhcCC-cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 44567999999988776666 567899999999998877653322 234566653 44555556789999999999999
Q ss_pred EEEEecC-CCCeeEEeeCCCEEEEECCC-----ceEEEEcCCCCcEEEEEEeeeCC--Eee------eeeeeeEEE-CCE
Q 023864 183 LEEFTHQ-MKDGWGLATDGKVLFGSDGS-----SMLYQIDPQTLKVIRKDIVRYKG--REV------RNLNELEFI-KGE 247 (276)
Q Consensus 183 i~~~~~~-~~EGWGLT~Dg~~L~vSDGS-----~~L~viDp~t~~vi~~I~V~~~g--~pv------~~lNELE~i-dG~ 247 (276)
+..+..+ ......+++||+.|+++... ..|.++|..+.+....+...... ..+ ..+..+.+. +|.
T Consensus 109 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 109 VATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 9999854 22344577899999887665 89999998776543333222110 000 033344444 454
Q ss_pred EEEEeCCCCCeEEEEeCCCCcEEEEEE
Q 023864 248 VWANVWQVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 248 lyANvw~s~d~I~vIDp~T~~v~l~~~ 274 (276)
.++..-.. ..|.+.|..++...+..+
T Consensus 189 ~l~~~~~d-g~i~i~d~~~~~~~~~~~ 214 (369)
T 3zwl_B 189 YIIAGHKD-GKISKYDVSNNYEYVDSI 214 (369)
T ss_dssp EEEEEETT-SEEEEEETTTTTEEEEEE
T ss_pred EEEEEcCC-CEEEEEECCCCcEeEEEE
Confidence 44444456 789999998855444443
No 110
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.66 E-value=8.2e-06 Score=70.89 Aligned_cols=168 Identities=10% Similarity=-0.010 Sum_probs=118.6
Q ss_pred eEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKT 171 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~ 171 (276)
+.+..++.. ...-...+.|++||+++.+++ .+..|+.||+.+++......-.... -..+++.. +++....-.++.
T Consensus 13 ~~~~~~~~g-h~~~v~~~~~s~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 13 YALKFTLAG-HTKAVSSVKFSPNGEWLASSS--ADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp CEEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETTSE
T ss_pred ceeEEEEcc-cCCcEEEEEECCCCCEEEEee--CCCeEEEEeCCCcccchhhccCCCc-eEEEEEcCCCCEEEEECCCCE
Confidence 445555542 345568999999998777766 6778999999999987765433222 23566653 455566667899
Q ss_pred EEEEeCCCCcEEEEEecCCCC--eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEE
Q 023864 172 GFIYDQNNLNKLEEFTHQMKD--GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEV 248 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~l 248 (276)
+.+||..+.+.+.++...... ...+.+|++.|+....+..|.++|.++.+.+..+.... . .++.+.+. +|.+
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~---~v~~~~~~~~~~~ 163 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS--D---PVSAVHFNRDGSL 163 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS--S---CEEEEEECTTSSE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC--C---cEEEEEEcCCCCE
Confidence 999999999999888643122 33467889999887778899999999998877665432 2 24445565 5655
Q ss_pred EEEeCCCCCeEEEEeCCCCcEE
Q 023864 249 WANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 249 yANvw~s~d~I~vIDp~T~~v~ 270 (276)
++..-.+ ..|.+.|.++++..
T Consensus 164 l~~~~~d-~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 164 IVSSSYD-GLCRIWDTASGQCL 184 (312)
T ss_dssp EEEEETT-SCEEEEETTTCCEE
T ss_pred EEEEeCC-CcEEEEECCCCcee
Confidence 5555566 88999999987644
No 111
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.66 E-value=3e-06 Score=76.37 Aligned_cols=162 Identities=9% Similarity=-0.046 Sum_probs=110.7
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCce----EEEEEEeCCEEEEEEeeC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYF----GEGLTLLGEKLFQVTWLQ 169 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~F----gEGit~~g~~LyqlTwk~ 169 (276)
+++-+++.+.... ....+. ++.+|..+. ...|..+|.++|+++-+...+...+ ....++.++.+|+.+. +
T Consensus 124 ~~~W~~~~~~~~~-~~p~~~-~~~v~v~~~---~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~-~ 197 (376)
T 3q7m_A 124 TVAWQTKVAGEAL-SRPVVS-DGLVLIHTS---NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGD-N 197 (376)
T ss_dssp CEEEEEECSSCCC-SCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCT-T
T ss_pred CEEEEEeCCCceE-cCCEEE-CCEEEEEcC---CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcC-C
Confidence 3444444432222 233444 588998654 4689999999999988887764432 1234556889988764 6
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCee-----------EEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeee
Q 023864 170 KTGFIYDQNNLNKLEEFTHQMKDGW-----------GLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNL 238 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~~EGW-----------GLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~l 238 (276)
+.++.+|+++.+.+-+++...+.|. ...-++..+|+......|+.+|++|++++-+.... ..
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~-------~~ 270 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG-------SV 270 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC-------CE
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC-------CC
Confidence 7899999999999988875422221 11224678888777789999999999987655432 12
Q ss_pred eeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 239 NELEFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 239 NELE~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
..+...++.||+.. .. +.|..+|++||++.
T Consensus 271 ~~~~~~~~~l~~~~-~~-g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 271 NDFIVDGNRIYLVD-QN-DRVMALTIDGGVTL 300 (376)
T ss_dssp EEEEEETTEEEEEE-TT-CCEEEEETTTCCEE
T ss_pred CCceEECCEEEEEc-CC-CeEEEEECCCCcEE
Confidence 33557799999887 35 68999999998864
No 112
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.65 E-value=4.7e-06 Score=71.46 Aligned_cols=157 Identities=10% Similarity=0.077 Sum_probs=107.9
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk 181 (276)
......+.|++|+.++.+++ .+..|+.||+++++......+.. ..--..+++.. ++++...-.++.+.+||..+.+
T Consensus 97 ~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 97 DNYIRSCKLLPDGCTLIVGG--EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp TSBEEEEEECTTSSEEEEEE--SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCcEEEEEEcCCCCEEEEEc--CCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 55668999999987666555 56789999999987433332222 22234566653 3444555578899999999999
Q ss_pred EEEEEecCCCC--eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCe
Q 023864 182 KLEEFTHQMKD--GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPC 258 (276)
Q Consensus 182 ~i~~~~~~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~ 258 (276)
.+.++...... ...+++||+.|+.......|.++|..+.+.+..+.... .+..+.+. +|..++..... +.
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~~-~~ 247 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS------QIFSLGYCPTGEWLAVGMES-SN 247 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEECTTSSEEEEEETT-SC
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC------ceEEEEECCCCCEEEEEcCC-Cc
Confidence 99988643122 33456799999988888899999999998887765432 34455564 55544444456 88
Q ss_pred EEEEeCCCCcE
Q 023864 259 IPYAYLQAFGS 269 (276)
Q Consensus 259 I~vIDp~T~~v 269 (276)
|.+.|.++++.
T Consensus 248 i~~~~~~~~~~ 258 (337)
T 1gxr_A 248 VEVLHVNKPDK 258 (337)
T ss_dssp EEEEETTSSCE
T ss_pred EEEEECCCCCe
Confidence 99999988654
No 113
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.65 E-value=1.9e-06 Score=74.76 Aligned_cols=166 Identities=7% Similarity=0.018 Sum_probs=112.0
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeC---
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQ--- 169 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~--- 169 (276)
+.+.++.. .......+.|++|+.++.+++ .+..|+.||+++++.+.....+.... .+++.. ++.+.+.-.+
T Consensus 65 ~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~~~~~ 139 (369)
T 3zwl_B 65 ERLGTLDG-HTGTIWSIDVDCFTKYCVTGS--ADYSIKLWDVSNGQCVATWKSPVPVK--RVEFSPCGNYFLAILDNVMK 139 (369)
T ss_dssp CEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTTEEEEEETTTCCEEEEEECSSCEE--EEEECTTSSEEEEEECCBTT
T ss_pred hhhhhhhh-cCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEeecCCCeE--EEEEccCCCEEEEecCCccC
Confidence 45666653 244567999999988777666 67899999999999988888555544 455543 3344444444
Q ss_pred --CEEEEEeCCCCcEEE-----------EEecC----CCCeeEEeeCCCEEEEECCCceEEEEcCCC-CcEEEEEEeeeC
Q 023864 170 --KTGFIYDQNNLNKLE-----------EFTHQ----MKDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYK 231 (276)
Q Consensus 170 --~~v~V~D~~tlk~i~-----------~~~~~----~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t-~~vi~~I~V~~~ 231 (276)
+.+.+||..+.+... .+... ......+++||+.|++......|.++|..+ .+.+..+....
T Consensus 140 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 218 (369)
T 3zwl_B 140 NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE- 218 (369)
T ss_dssp BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS-
T ss_pred CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC-
Confidence 899999987654322 22211 012233668999999988889999999999 67776666532
Q ss_pred CEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 232 GREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 232 g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
. .++.+.+. +|..++..-.. ..|.+.|.++++..
T Consensus 219 -~---~v~~~~~~~~~~~l~~~~~d-~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 219 -K---SISDMQFSPDLTYFITSSRD-TNSFLVDVSTLQVL 253 (369)
T ss_dssp -S---CEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEE
T ss_pred -C---ceeEEEECCCCCEEEEecCC-ceEEEEECCCCcee
Confidence 2 34455565 55544444456 89999999997654
No 114
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.62 E-value=5.9e-06 Score=71.83 Aligned_cols=170 Identities=12% Similarity=0.025 Sum_probs=116.0
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTG 172 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v 172 (276)
+.+.++.. .......+.|++++.++.+++ .+..|+.||+++++.+......... -..+++. +++++...-.++.+
T Consensus 98 ~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 98 KCLKTLKG-HSNYVFCCNFNPQSNLIVSGS--FDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp CEEEEEEC-CSSCEEEEEECSSSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETTSCE
T ss_pred cEEEEEcC-CCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCEEEEEecCCCCc-EEEEEEcCCCCEEEEEeCCCcE
Confidence 34555543 355668999999988777766 6778999999999987766543332 2355664 34566666678999
Q ss_pred EEEeCCCCcEEEEEecCCC---CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeee-eEEECCEE
Q 023864 173 FIYDQNNLNKLEEFTHQMK---DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNE-LEFIKGEV 248 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~~~---EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNE-LE~idG~l 248 (276)
.+||..+.+.+.++..... ....+++||+.|+.+.....|.++|..+.+.++.+.-..+.. ..+.- ....+|..
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK--YCIFANFSVTGGKW 251 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS--SCCCEEEECSSSCE
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce--EEEEEEEEeCCCcE
Confidence 9999999999888754311 223467899999998888899999999998877664332111 11110 11125666
Q ss_pred EEEeCCCCCeEEEEeCCCCcEE
Q 023864 249 WANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 249 yANvw~s~d~I~vIDp~T~~v~ 270 (276)
.+..-.+ ..|.+.|.++++.+
T Consensus 252 l~sg~~d-g~i~vwd~~~~~~~ 272 (312)
T 4ery_A 252 IVSGSED-NLVYIWNLQTKEIV 272 (312)
T ss_dssp EEECCTT-SCEEEEETTTCCEE
T ss_pred EEEECCC-CEEEEEECCCchhh
Confidence 6666556 88999999886643
No 115
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.61 E-value=3.6e-06 Score=73.94 Aligned_cols=166 Identities=10% Similarity=0.021 Sum_probs=111.8
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTG 172 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v 172 (276)
++.+++.. ...-+.++.|+|||.++.+++ .+..|+.||+++++.+........+. ..+.+. ++++....-.++++
T Consensus 4 ~~~~~~~~-h~~~V~~~~fsp~~~~l~s~~--~dg~v~lWd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 4 DIKKTFSN-RSDRVKGIDFHPTEPWVLTTL--YSGRVELWNYETQVEVRSIQVTETPV-RAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCEEEEEE-ECSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCE-EEEEEEGGGTEEEEEETTSEE
T ss_pred eeEEeecC-CCCceEEEEECCCCCEEEEEc--CCCcEEEEECCCCceeEEeeccCCcE-EEEEEeCCCCEEEEECCCCEE
Confidence 44555542 244567999999998877777 77899999999999888776554432 233333 34455555678999
Q ss_pred EEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEE
Q 023864 173 FIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEV 248 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~l 248 (276)
.+||.++.+.+.++..... ....+.+|++.|+....+..|.++|.++.......-- ++. ..++-+.+. ++.+
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~---~h~-~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE---GHE-HFVMCVAFNPKDPST 155 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC---CCC-SCEEEEEECTTCTTE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc---ccC-CcEEEEEECCCCCCE
Confidence 9999999999998864311 2334678999888877788999999887744332211 111 234455565 4556
Q ss_pred EEEeCCCCCeEEEEeCCCCc
Q 023864 249 WANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 249 yANvw~s~d~I~vIDp~T~~ 268 (276)
+|..-.+ ..|.+-|..+++
T Consensus 156 l~sgs~D-~~v~iwd~~~~~ 174 (304)
T 2ynn_A 156 FASGCLD-RTVKVWSLGQST 174 (304)
T ss_dssp EEEEETT-SEEEEEETTCSS
T ss_pred EEEEeCC-CeEEEEECCCCC
Confidence 6665556 778888876543
No 116
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.60 E-value=9.2e-07 Score=78.17 Aligned_cols=144 Identities=14% Similarity=0.188 Sum_probs=99.2
Q ss_pred CceEEEEecCCEEEEEcCCC---------------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEee
Q 023864 106 FTQGLLYAENDTLFESTGLY---------------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL 168 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~y---------------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk 168 (276)
....+.+++||+||.+.-.| +...|.++|+++|++.... ...++-|+++. ++.||+.+..
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEEEEEECTTSSEEEEEECC
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCcceEEcCCCCEEEEEecC
Confidence 34679999999999864211 2467999999999875443 22345678886 4579999887
Q ss_pred C-----CEEEEEeCCCCcE--EEEEe---cCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeee
Q 023864 169 Q-----KTGFIYDQNNLNK--LEEFT---HQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNL 238 (276)
Q Consensus 169 ~-----~~v~V~D~~tlk~--i~~~~---~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~l 238 (276)
. +.+.+||.+.-.. ...+. ...++|..+.+||. ||++++ +.|+++|| +.+.+.++.+.. .+
T Consensus 209 ~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~-~gv~~~~~-~g~~~~~~~~~~------~~ 279 (305)
T 3dr2_A 209 EQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSG-TGVCVFDS-DGQLLGHIPTPG------TA 279 (305)
T ss_dssp C---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCS-SEEEEECT-TSCEEEEEECSS------CC
T ss_pred CcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecC-CcEEEECC-CCCEEEEEECCC------ce
Confidence 3 8999999765431 11221 12456777788887 999884 56999999 578888887754 23
Q ss_pred eeeEEE-C-CEEEEEeCCCCCeEEEEeC
Q 023864 239 NELEFI-K-GEVWANVWQVWPCIPYAYL 264 (276)
Q Consensus 239 NELE~i-d-G~lyANvw~s~d~I~vIDp 264 (276)
+-+.+. + +.||+... +.+.++++
T Consensus 280 ~~~~f~~d~~~L~it~~---~~l~~~~~ 304 (305)
T 3dr2_A 280 SNCTFDQAQQRLFITGG---PCLWMLPL 304 (305)
T ss_dssp CEEEECTTSCEEEEEET---TEEEEEEC
T ss_pred eEEEEeCCCCEEEEEcC---CeEEEEEC
Confidence 344553 3 47998874 56888875
No 117
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.60 E-value=3.6e-08 Score=99.75 Aligned_cols=151 Identities=9% Similarity=0.092 Sum_probs=108.2
Q ss_pred CceEEEEecC-CEEEEEcCCCCCCeEEEEeCCC----CcEEEEeecC-CCceEEEEEEe--CCEEEEEEeeCCEEEEEeC
Q 023864 106 FTQGLLYAEN-DTLFESTGLYGRSSVRRVALET----GKVEAINQME-GSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQ 177 (276)
Q Consensus 106 FTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~t----gkv~~~~~l~-~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~ 177 (276)
...||.|+++ ++||.+.- ....|+++++++ .... ..+. ....++||+++ +++||++....+++.++|+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~--~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TCCCCEEETTTTEEEECCT--TTTSBEEEESCCCCC-CCCC--CBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred ceEEEccccccCeEEEEec--CCCeEEEEecCCCCCCcceE--EEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 3469999974 78998754 678999999986 2211 1122 22346788885 6899999999999999998
Q ss_pred CCCcEEEEEec--CCCCeeEEeeCCCEEEEEC-CC-ceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEE
Q 023864 178 NNLNKLEEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWAN 251 (276)
Q Consensus 178 ~tlk~i~~~~~--~~~EGWGLT~Dg~~L~vSD-GS-~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyAN 251 (276)
+.......+.. ..|.|..+.+++.+||++| |. .+|+++|+..-.. + +.+.. .+..+|-|.+. +++||++
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~-~l~~~---~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-Y-SLVTE---NIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-C-EESCS---SCSSCCCEEECTTTCCEEEE
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-e-EEEeC---CCCCccEEEEeccCCEEEEE
Confidence 87654433332 2467888888899999999 65 7999998764321 1 11221 34578888886 5789999
Q ss_pred eCCCCCeEEEEeCCC
Q 023864 252 VWQVWPCIPYAYLQA 266 (276)
Q Consensus 252 vw~s~d~I~vIDp~T 266 (276)
.+.. +.|.+||+..
T Consensus 558 D~~~-~~I~~~d~dG 571 (699)
T 1n7d_A 558 DSKL-HSISSIDVNG 571 (699)
T ss_dssp ETTT-TEEEEECSSS
T ss_pred ecCC-CeEEEEccCC
Confidence 9999 9999999965
No 118
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.56 E-value=2.1e-05 Score=70.16 Aligned_cols=167 Identities=11% Similarity=0.064 Sum_probs=117.6
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTG 172 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v 172 (276)
+.+.++...+ .-...+.|+||++++.+++ ....|+.||+++++......... .+-..+++.. +++....-.++.+
T Consensus 113 ~~~~~~~~~~-~~~~~~~~spdg~~l~~g~--~dg~v~i~~~~~~~~~~~~~~~~-~~v~~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 113 KQIKSIDAGP-VDAWTLAFSPDSQYLATGT--HVGKVNIFGVESGKKEYSLDTRG-KFILSIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp EEEEEEECCT-TCCCCEEECTTSSEEEEEC--TTSEEEEEETTTCSEEEEEECSS-SCEEEEEECTTSSEEEEEETTSCE
T ss_pred CEEEEEeCCC-ccEEEEEECCCCCEEEEEc--CCCcEEEEEcCCCceeEEecCCC-ceEEEEEECCCCCEEEEEcCCCeE
Confidence 4455554322 2235799999988777666 67889999999998776655433 2345666653 4555566678999
Q ss_pred EEEeCCCCcEEEEEecC--CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEE
Q 023864 173 FIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVW 249 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~--~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~ly 249 (276)
.+||..+.+.+.++.-. .-....+++||+.|+....+..|.++|.++.+.+.++.-.. ..++.+.+. +|...
T Consensus 189 ~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 189 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA-----SWVLNVAFCPDDTHF 263 (321)
T ss_dssp EEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS-----SCEEEEEECTTSSEE
T ss_pred EEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC-----CceEEEEECCCCCEE
Confidence 99999999999988632 12455678899999888778899999999988876653221 134456665 56666
Q ss_pred EEeCCCCCeEEEEeCCCCcEE
Q 023864 250 ANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 250 ANvw~s~d~I~vIDp~T~~v~ 270 (276)
|..-.+ ..|.+-|.++++.+
T Consensus 264 ~s~s~D-~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 264 VSSSSD-KSVKVWDVGTRTCV 283 (321)
T ss_dssp EEEETT-SCEEEEETTTTEEE
T ss_pred EEEeCC-CcEEEEeCCCCEEE
Confidence 666566 88999999986543
No 119
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.55 E-value=3e-06 Score=77.19 Aligned_cols=157 Identities=8% Similarity=0.012 Sum_probs=107.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
...+..+.|++||+++.+++ .+..|+.||+++++.+....-... --..+++. +..+++..-.++++.+||..+.+
T Consensus 127 ~~~V~~v~~spdg~~l~sgs--~d~~i~iwd~~~~~~~~~~~~h~~-~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGS--KDICIKVWDLAQQVVLSSYRAHAA-QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSS-CEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCEEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCcCC-ceEEEEecCCCCCceeeeccccccccccccccc
Confidence 55668999999998887776 677899999999998776542222 12344543 45677777788999999999999
Q ss_pred EEEEEecCCC----CeeEEeeCCCEEEEE-CCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCC
Q 023864 182 KLEEFTHQMK----DGWGLATDGKVLFGS-DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ 254 (276)
Q Consensus 182 ~i~~~~~~~~----EGWGLT~Dg~~L~vS-DGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~ 254 (276)
.+.++..... ....+.+++..++++ .....|.++|.++.+.++++.... ..++.+.|. +| ++.|..-.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~-----~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 204 PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS-----QCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS-----SCEEEEEECSSSSCCEEEEET
T ss_pred eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC-----CCEEEEEEccCCCeEEEEEeC
Confidence 9888754311 122345666655554 456789999999998887776432 234556675 45 56666656
Q ss_pred CCCeEEEEeCCCCcE
Q 023864 255 VWPCIPYAYLQAFGS 269 (276)
Q Consensus 255 s~d~I~vIDp~T~~v 269 (276)
+ ..|.+-|.++++.
T Consensus 279 D-~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 279 D-CSLAVLDSSLSEL 292 (344)
T ss_dssp T-SCEEEECTTCCEE
T ss_pred C-CeEEEEECCCCcE
Confidence 6 7899999998653
No 120
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.55 E-value=1.5e-05 Score=71.98 Aligned_cols=170 Identities=12% Similarity=0.100 Sum_probs=114.7
Q ss_pred eEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc---EEEEeecC-----CCceEEEEEEe--CCEE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK---VEAINQME-----GSYFGEGLTLL--GEKL 162 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk---v~~~~~l~-----~~~FgEGit~~--g~~L 162 (276)
-+|++++|.+...=.+|+++.++|+++.+.- +...+.+++..... ...+..++ .+.=-|||+++ +++|
T Consensus 58 g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E--~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L 135 (255)
T 3qqz_A 58 GDLIRTIPLDFVKDLETIEYIGDNQFVISDE--RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTF 135 (255)
T ss_dssp CCEEEEEECSSCSSEEEEEECSTTEEEEEET--TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEE
T ss_pred CCEEEEEecCCCCChHHeEEeCCCEEEEEEC--CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEE
Confidence 4688999875434459999999999888754 66889888876533 34555443 12223999997 4699
Q ss_pred EEEEeeCC-EEEEEeC--C--CCcEEEE------EecCCCCeeEEeeCCCEEEE-ECCCceEEEEcCCCCcEEEEEEeee
Q 023864 163 FQVTWLQK-TGFIYDQ--N--NLNKLEE------FTHQMKDGWGLATDGKVLFG-SDGSSMLYQIDPQTLKVIRKDIVRY 230 (276)
Q Consensus 163 yqlTwk~~-~v~V~D~--~--tlk~i~~------~~~~~~EGWGLT~Dg~~L~v-SDGS~~L~viDp~t~~vi~~I~V~~ 230 (276)
|++..++. .++.+|- . .++.+.. +...-..|..+.+.-++||+ ||.+..|..+|++ ++++.......
T Consensus 136 ~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~ 214 (255)
T 3qqz_A 136 WFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTK 214 (255)
T ss_dssp EEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECST
T ss_pred EEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCC
Confidence 99999887 8888982 2 2333211 11112355556655555555 9999999999977 66888888863
Q ss_pred C--C--EeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCC
Q 023864 231 K--G--REVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 231 ~--g--~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~ 267 (276)
+ | +.+.+++-+.+. +|.||+.+ .- |.+.+..++.+
T Consensus 215 g~~~l~~~~~qpEGia~d~~G~lyIvs-E~-n~~y~f~~~~~ 254 (255)
T 3qqz_A 215 GSRGLSHNIKQAEGVAMDASGNIYIVS-EP-NRFYRFTPQSS 254 (255)
T ss_dssp TGGGCSSCCCSEEEEEECTTCCEEEEE-TT-TEEEEEEC---
T ss_pred ccCCcccccCCCCeeEECCCCCEEEEc-CC-ceEEEEEecCC
Confidence 1 2 235566767776 67899886 66 89999987764
No 121
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.55 E-value=6.5e-06 Score=74.84 Aligned_cols=160 Identities=7% Similarity=0.027 Sum_probs=112.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEe--eCCEEEEEeCCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTW--LQKTGFIYDQNN 179 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTw--k~~~v~V~D~~t 179 (276)
.....++.|++++.++.+++ .+..|+.||+.+++......-... .-..+++. ++.++...- .++.+.+||..+
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGG--NDNVVQIWDARSSIPKFTKTNHNA-AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTCSSEEEEECCCSS-CCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred CCCeeEEEEcCCCCEEEEEe--CCCeEEEccCCCCCccEEecCCcc-eEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 45568999999988777666 678999999999988766542222 12355665 456666654 799999999999
Q ss_pred CcEEEEEecC-CCCeeEEeeCCCEEEEECC--CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCC
Q 023864 180 LNKLEEFTHQ-MKDGWGLATDGKVLFGSDG--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQV 255 (276)
Q Consensus 180 lk~i~~~~~~-~~EGWGLT~Dg~~L~vSDG--S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s 255 (276)
.+.+.++..+ .-....+++||+.|+++.| ...|.++|..+.+............ .++-+.+. ||...|....+
T Consensus 294 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~---~v~~~~~s~dg~~l~s~~~d 370 (401)
T 4aez_A 294 GARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT---RVLYSALSPDGRILSTAASD 370 (401)
T ss_dssp CCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS---CCCEEEECTTSSEEEEECTT
T ss_pred CCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC---CEEEEEECCCCCEEEEEeCC
Confidence 9999999765 1233346789999999654 7899999999877766655543222 34445565 56666666566
Q ss_pred CCeEEEEeCCCCcEE
Q 023864 256 WPCIPYAYLQAFGSS 270 (276)
Q Consensus 256 ~d~I~vIDp~T~~v~ 270 (276)
..|.+.|..+++.+
T Consensus 371 -g~i~iw~~~~~~~~ 384 (401)
T 4aez_A 371 -ENLKFWRVYDGDHV 384 (401)
T ss_dssp -SEEEEEECCC----
T ss_pred -CcEEEEECCCCccc
Confidence 89999999997644
No 122
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.54 E-value=2.3e-06 Score=75.69 Aligned_cols=167 Identities=9% Similarity=0.013 Sum_probs=116.8
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCce--------------EEEEEEeC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYF--------------GEGLTLLG 159 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~F--------------gEGit~~g 159 (276)
+.+..+.. .......+.|++++.++.+++ .+..|+.||+++++.+.........- ...+++.+
T Consensus 140 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (425)
T 1r5m_A 140 ALLNVLNF-HRAPIVSVKWNKDGTHIISMD--VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD 216 (425)
T ss_dssp CEEEEECC-CCSCEEEEEECTTSSEEEEEE--TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE
T ss_pred CeeeeccC-CCccEEEEEECCCCCEEEEEe--cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC
Confidence 34555553 345567999999987666666 67889999999999888776554320 22445555
Q ss_pred CEEEEEEeeCCEEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeee
Q 023864 160 EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (276)
Q Consensus 160 ~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~ 237 (276)
+..+++.-.++.+.+||..+.+.+..+..... ....+++|++.|+.+.....|.++|..+.+.+..+.-.. . .
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~---~ 291 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHS--Q---S 291 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCS--S---C
T ss_pred CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCC--c---c
Confidence 55566677789999999999998888853211 234567899999888788899999999988776664321 2 3
Q ss_pred eeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 238 LNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 238 lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+..+.+. +| .++..-.. ..|.+.|.++++.+
T Consensus 292 i~~~~~~~~~-~l~~~~~d-~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 292 IVSASWVGDD-KVISCSMD-GSVRLWSLKQNTLL 323 (425)
T ss_dssp EEEEEEETTT-EEEEEETT-SEEEEEETTTTEEE
T ss_pred EEEEEECCCC-EEEEEeCC-CcEEEEECCCCcEe
Confidence 4456676 56 55555566 89999999986543
No 123
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.53 E-value=3.8e-06 Score=72.88 Aligned_cols=164 Identities=9% Similarity=0.058 Sum_probs=107.1
Q ss_pred CCCceEEEEecCCEEEEEcCCC--CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCC----EEEEEEeeCCEEEEEeC
Q 023864 104 RAFTQGLLYAENDTLFESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGE----KLFQVTWLQKTGFIYDQ 177 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~y--g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~----~LyqlTwk~~~v~V~D~ 177 (276)
..-+..+.|+|++..+..+|.. ++..|+.||+++++.......+..---..+++..+ .+....-.++.+.+||.
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 4445699999987433345534 47899999999998765554443222345555443 66666677899999999
Q ss_pred CCCc-EEEEEecCCCCeeEE--------eeCCCEEEEECCCceEEEEcCCCCc-EEEEEEeeeCCEeeeeeeeeEE----
Q 023864 178 NNLN-KLEEFTHQMKDGWGL--------ATDGKVLFGSDGSSMLYQIDPQTLK-VIRKDIVRYKGREVRNLNELEF---- 243 (276)
Q Consensus 178 ~tlk-~i~~~~~~~~EGWGL--------T~Dg~~L~vSDGS~~L~viDp~t~~-vi~~I~V~~~g~pv~~lNELE~---- 243 (276)
.+.+ .+.++......=..+ ++|++.|+.+..+..|.++|..+.+ .+..+.... +..-..++.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 98 EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ-GENKRDCWTVAFGNAY 176 (357)
T ss_dssp TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT-TSCCCCEEEEEEECCC
T ss_pred CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC-CCCCCceEEEEEEecc
Confidence 9888 777775321223334 5789999888778899999999886 555554432 221223444443
Q ss_pred -ECCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 244 -IKGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 244 -idG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.+|..++....+ ..|.+.|.++++.
T Consensus 177 ~~~~~~l~~~~~d-~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 177 NQEERVVCAGYDN-GDIKLFDLRNMAL 202 (357)
T ss_dssp C-CCCEEEEEETT-SEEEEEETTTTEE
T ss_pred CCCCCEEEEEccC-CeEEEEECccCce
Confidence 356655555566 8899999998665
No 124
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.50 E-value=7.8e-06 Score=82.10 Aligned_cols=154 Identities=14% Similarity=0.066 Sum_probs=109.2
Q ss_pred eEEEEecC-CEEEEEcCCC------------C----CCeEEEEeCCCCcEEEEeecCC----------CceEEEEEEeCC
Q 023864 108 QGLLYAEN-DTLFESTGLY------------G----RSSVRRVALETGKVEAINQMEG----------SYFGEGLTLLGE 160 (276)
Q Consensus 108 QGL~~~~d-g~LyeStG~y------------g----~S~I~~iDl~tgkv~~~~~l~~----------~~FgEGit~~g~ 160 (276)
.++.++++ +.+|..++.- | .++|..+|.+||+++-+..+.. .+.-.++..+|+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 46788876 6899888731 1 1369999999999987766542 233334444442
Q ss_pred --EEEEEEeeCCEEEEEeCCCCcEEEEEecCCCC--------------------------------------eeEEeeCC
Q 023864 161 --KLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD--------------------------------------GWGLATDG 200 (276)
Q Consensus 161 --~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~E--------------------------------------GWGLT~Dg 200 (276)
+++...-+++.++++|++|.+++.++++. +. +..+++++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~-~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~ 404 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFV-PVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT 404 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESS-CCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEecccccc-ccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC
Confidence 55555668999999999999999888753 11 23467788
Q ss_pred CEEEEEC---------------C----------------------------CceEEEEcCCCCcEEEEEEeee--CCEee
Q 023864 201 KVLFGSD---------------G----------------------------SSMLYQIDPQTLKVIRKDIVRY--KGREV 235 (276)
Q Consensus 201 ~~L~vSD---------------G----------------------------S~~L~viDp~t~~vi~~I~V~~--~g~pv 235 (276)
+.+|+.. | ...|..+|++|++++-++..+. .+.+
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~- 483 (677)
T 1kb0_A 405 GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGT- 483 (677)
T ss_dssp TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCE-
T ss_pred CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcc-
Confidence 9999842 1 1679999999999988887753 2222
Q ss_pred eeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 236 RNLNELEFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 236 ~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+...+|.||+. -.+ +.+.++|.+||+++
T Consensus 484 -----~~~~g~~v~~g-~~d-g~l~a~D~~tG~~l 511 (677)
T 1kb0_A 484 -----LTTAGNVVFQG-TAD-GRLVAYHAATGEKL 511 (677)
T ss_dssp -----EEETTTEEEEE-CTT-SEEEEEETTTCCEE
T ss_pred -----eEeCCCEEEEE-CCC-CcEEEEECCCCcee
Confidence 22446788886 356 89999999998865
No 125
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.49 E-value=1.9e-05 Score=77.78 Aligned_cols=154 Identities=13% Similarity=0.050 Sum_probs=107.3
Q ss_pred EEEEecC-CEEEEEcCCC---------C----CCeEEEEeCCCCcEEEEeecCC----------CceEEEEEEeCC--EE
Q 023864 109 GLLYAEN-DTLFESTGLY---------G----RSSVRRVALETGKVEAINQMEG----------SYFGEGLTLLGE--KL 162 (276)
Q Consensus 109 GL~~~~d-g~LyeStG~y---------g----~S~I~~iDl~tgkv~~~~~l~~----------~~FgEGit~~g~--~L 162 (276)
.+.++++ +.+|.++|.- + .+.|..+|++||+++=+.++.. .+.-.+.+..|. ++
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL 318 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence 3677764 7899988731 1 2479999999999987776542 222222232332 45
Q ss_pred EEEEeeCCEEEEEeCCCCcEEEEEecCCC-----------------------------------------CeeEEeeCCC
Q 023864 163 FQVTWLQKTGFIYDQNNLNKLEEFTHQMK-----------------------------------------DGWGLATDGK 201 (276)
Q Consensus 163 yqlTwk~~~v~V~D~~tlk~i~~~~~~~~-----------------------------------------EGWGLT~Dg~ 201 (276)
+...-+++.++++|++|.+++.++++... .+-++.++++
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 55666789999999999999988875410 1123566788
Q ss_pred EEEEEC-------------------------------------CCceEEEEcCCCCcEEEEEEeeeC--CEeeeeeeeeE
Q 023864 202 VLFGSD-------------------------------------GSSMLYQIDPQTLKVIRKDIVRYK--GREVRNLNELE 242 (276)
Q Consensus 202 ~L~vSD-------------------------------------GS~~L~viDp~t~~vi~~I~V~~~--g~pv~~lNELE 242 (276)
.+|+.. ....|+.+|++|++++-++..... +.+ +.
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~------~~ 472 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGT------LY 472 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBC------EE
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCcccee------EE
Confidence 888842 346899999999999888776531 112 22
Q ss_pred EECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 243 FIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 243 ~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
..+|.||+.. .+ ..|.++|.+||++.
T Consensus 473 t~gg~v~~g~-~d-g~l~a~D~~tG~~l 498 (571)
T 2ad6_A 473 TKGGLVWYAT-LD-GYLKALDNKDGKEL 498 (571)
T ss_dssp ETTTEEEEEC-TT-SEEEEEETTTCCEE
T ss_pred ECCCEEEEEc-CC-CeEEEEECCCCCEE
Confidence 4478999964 56 89999999998865
No 126
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.49 E-value=2.5e-05 Score=67.71 Aligned_cols=171 Identities=13% Similarity=0.084 Sum_probs=116.1
Q ss_pred eeeEEEEEEecCCCCCceEEEEecC----C-EEEEEcCCCCCCeEEEEeCCCCcEEEEee------cCCCceEEEEEEeC
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAEN----D-TLFESTGLYGRSSVRRVALETGKVEAINQ------MEGSYFGEGLTLLG 159 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~d----g-~LyeStG~yg~S~I~~iDl~tgkv~~~~~------l~~~~FgEGit~~g 159 (276)
+.++.++.+......-...+.|+|+ . .++. ++ +...|+.||+.+++.+.... -....+.-.+...+
T Consensus 5 ~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~-~~--~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 81 (366)
T 3k26_A 5 YSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFA-TV--GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDS 81 (366)
T ss_dssp CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEE-EE--ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECT
T ss_pred eEEEEEEEeecCCCCceEEEEEecccCCCCceEEE-EC--CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCC
Confidence 5777777887556777789999973 2 3554 44 44599999999887655442 12344544444442
Q ss_pred ---CEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCC--eeEEee-CCCEEEEECCCceEEEEcCCCCcEEEEEEe-eeCC
Q 023864 160 ---EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD--GWGLAT-DGKVLFGSDGSSMLYQIDPQTLKVIRKDIV-RYKG 232 (276)
Q Consensus 160 ---~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~E--GWGLT~-Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V-~~~g 232 (276)
+++....-.++.+.+||..+.+.+.++...... ...+.+ |++.|+....+..|.++|..+.+.+..+.. ....
T Consensus 82 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 82 NTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp TTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred CCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc
Confidence 367777778999999999999999998732122 233556 778888877788999999999988776632 1111
Q ss_pred EeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 233 REVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 233 ~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
. .++.+.+. +|...+..-.+ ..|.+.|.++++
T Consensus 162 ~---~v~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~ 194 (366)
T 3k26_A 162 D---EVLSADYDLLGEKIMSCGMD-HSLKLWRINSKR 194 (366)
T ss_dssp S---CEEEEEECTTSSEEEEEETT-SCEEEEESCSHH
T ss_pred C---ceeEEEECCCCCEEEEecCC-CCEEEEECCCCc
Confidence 2 34555665 45555555466 899999998754
No 127
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.48 E-value=2.4e-05 Score=69.77 Aligned_cols=157 Identities=13% Similarity=0.026 Sum_probs=114.3
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk 181 (276)
..-+..+.+++++.++.+++ .+..|+.||+++++.+....... ... .+++.. ++.....-.++.+.+||..+.+
T Consensus 80 ~~~v~~~~~~~~~~~l~s~s--~D~~i~lWd~~~~~~~~~~~~~~~~~~--~~~~spdg~~l~~g~~dg~v~i~~~~~~~ 155 (321)
T 3ow8_A 80 QLGVVSVDISHTLPIAASSS--LDAHIRLWDLENGKQIKSIDAGPVDAW--TLAFSPDSQYLATGTHVGKVNIFGVESGK 155 (321)
T ss_dssp SSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCTTCCC--CEEECTTSSEEEEECTTSEEEEEETTTCS
T ss_pred CCCEEEEEECCCCCEEEEEe--CCCcEEEEECCCCCEEEEEeCCCccEE--EEEECCCCCEEEEEcCCCcEEEEEcCCCc
Confidence 44457899999888877777 78899999999999887765443 223 344442 4455556678999999999999
Q ss_pred EEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCe
Q 023864 182 KLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPC 258 (276)
Q Consensus 182 ~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~ 258 (276)
.+.++..... ....+++||+.|........|.++|.++.+.+.++.-.. . .++.+.+. ||.+.|..-.+ ..
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~--~---~v~~l~~spd~~~l~s~s~d-g~ 229 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA--M---PIRSLTFSPDSQLLVTASDD-GY 229 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--S---CCCEEEECTTSCEEEEECTT-SC
T ss_pred eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC--C---ceeEEEEcCCCCEEEEEcCC-Ce
Confidence 8888864311 244577899999988778899999999998877664321 1 34556665 56666666566 88
Q ss_pred EEEEeCCCCcEE
Q 023864 259 IPYAYLQAFGSS 270 (276)
Q Consensus 259 I~vIDp~T~~v~ 270 (276)
|.+.|.++++..
T Consensus 230 i~iwd~~~~~~~ 241 (321)
T 3ow8_A 230 IKIYDVQHANLA 241 (321)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCccee
Confidence 999999986543
No 128
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.47 E-value=3.8e-05 Score=68.45 Aligned_cols=166 Identities=14% Similarity=0.088 Sum_probs=112.9
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc----EEEEeecCCCceEEEEEEe-CCEEEEEEee
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK----VEAINQMEGSYFGEGLTLL-GEKLFQVTWL 168 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk----v~~~~~l~~~~FgEGit~~-g~~LyqlTwk 168 (276)
+.+.+++. .......+.|+++|.++.++| .+..|+.||+.+++ +..... +..-.-..+.+. +++ ++..-.
T Consensus 88 ~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s~ 162 (340)
T 1got_B 88 NKVHAIPL-RSSWVMTCAYAPSGNYVACGG--LDNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSSG 162 (340)
T ss_dssp CEEEEEEC-SSSCEEEEEECTTSSEEEEEE--TTCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEET
T ss_pred CcceEeec-CCccEEEEEECCCCCEEEEEe--CCCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEEC
Confidence 45566664 355668999999998877777 67899999998763 322222 212222344444 345 445556
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCee--EEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-C
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQMKDGW--GLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~~EGW--GLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-d 245 (276)
++.+.+||..+.+.+.++.-....-+ .+.+|++.|+.......|.++|..+.+.+.++.-.. ..++-+.+. +
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~-----~~v~~v~~~p~ 237 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE-----SDINAICFFPN 237 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS-----SCEEEEEECTT
T ss_pred CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc-----CCEEEEEEcCC
Confidence 89999999999999988863212223 356788888777678899999999998776654322 235556665 5
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
|..+|..-.+ ..|.+.|.++++..
T Consensus 238 ~~~l~s~s~d-~~v~iwd~~~~~~~ 261 (340)
T 1got_B 238 GNAFATGSDD-ATCRLFDLRADQEL 261 (340)
T ss_dssp SSEEEEEETT-SCEEEEETTTTEEE
T ss_pred CCEEEEEcCC-CcEEEEECCCCcEE
Confidence 6666666566 88999999986654
No 129
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.45 E-value=7.8e-05 Score=66.88 Aligned_cols=153 Identities=13% Similarity=0.115 Sum_probs=100.4
Q ss_pred EEecCCCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEEEE
Q 023864 98 EFPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIY 175 (276)
Q Consensus 98 ~~Phd~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~ 175 (276)
.+......+.+|..++++ +.||.+.. ....|.+||++++++. ...++..+. ++++. ++++|+.+ ++.++++
T Consensus 42 ~~~~~~~~~~egp~~~~~~~~l~~~d~--~~~~i~~~d~~~~~~~-~~~~~~~v~--~i~~~~dg~l~v~~--~~gl~~~ 114 (326)
T 2ghs_A 42 VLDETPMLLGEGPTFDPASGTAWWFNI--LERELHELHLASGRKT-VHALPFMGS--ALAKISDSKQLIAS--DDGLFLR 114 (326)
T ss_dssp EEECSCCSBEEEEEEETTTTEEEEEEG--GGTEEEEEETTTTEEE-EEECSSCEE--EEEEEETTEEEEEE--TTEEEEE
T ss_pred EeeccCCCCCcCCeEeCCCCEEEEEEC--CCCEEEEEECCCCcEE-EEECCCcce--EEEEeCCCeEEEEE--CCCEEEE
Confidence 333334457799999987 67887643 4678999999998764 445665544 55554 57899887 5569999
Q ss_pred eCCCCcEEEEEecC--C----CCeeEEeeCCCEEEEEC-C------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeE
Q 023864 176 DQNNLNKLEEFTHQ--M----KDGWGLATDGKVLFGSD-G------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE 242 (276)
Q Consensus 176 D~~tlk~i~~~~~~--~----~EGWGLT~Dg~~L~vSD-G------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE 242 (276)
|+++.+...-...+ . .....+.+||+ +|+++ + ...|+.+| +.++..... .....|.+.
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~------~~~~~~~i~ 185 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKLFA------DISIPNSIC 185 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEEEE------EESSEEEEE
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEeeC------CCcccCCeE
Confidence 99887754322221 0 11233566776 66655 2 46899999 555432211 123567777
Q ss_pred EE-CC-EEEEEeCCCCCeEEEEeCC--CC
Q 023864 243 FI-KG-EVWANVWQVWPCIPYAYLQ--AF 267 (276)
Q Consensus 243 ~i-dG-~lyANvw~s~d~I~vIDp~--T~ 267 (276)
+. || .+|+..... +.|.++|.+ +|
T Consensus 186 ~s~dg~~lyv~~~~~-~~I~~~d~~~~~G 213 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKV-NRLMRVPLDARTG 213 (326)
T ss_dssp ECTTSCEEEEEETTT-CEEEEEEBCTTTC
T ss_pred EcCCCCEEEEEECCC-CEEEEEEcccccC
Confidence 76 56 699888778 899999975 65
No 130
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.45 E-value=2.5e-05 Score=71.21 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=107.1
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~ 171 (276)
+++..+.. .......+.|++++..+.+++ .+..|+.||+++++............ .+++. +++++...-.++.
T Consensus 156 ~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 156 KIVMILQG-HEQDIYSLDYFPSGDKLVSGS--GDRTVRIWDLRTGQCSLTLSIEDGVT--TVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp EEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEE--EEEECSTTCCEEEEEETTSC
T ss_pred cEEEEEcc-CCCCEEEEEEcCCCCEEEEec--CCCcEEEEECCCCeeEEEEEcCCCcE--EEEEECCCCCEEEEEcCCCc
Confidence 45555542 234457999999987777777 78899999999999877776655533 44554 4667777778999
Q ss_pred EEEEeCCCCcEEEEEecC------C---CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEe--------eeCCEe
Q 023864 172 GFIYDQNNLNKLEEFTHQ------M---KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV--------RYKGRE 234 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~------~---~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V--------~~~g~p 234 (276)
+.+||..+.+.+.++..+ . -....+++||+.|+....+..|.++|..+.+....... ...|+.
T Consensus 231 v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~ 310 (393)
T 1erj_A 231 VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 310 (393)
T ss_dssp EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS
T ss_pred EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc
Confidence 999999999988877421 0 12234678999998877788999999887544322111 111110
Q ss_pred eeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 235 VRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 235 v~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
..++-+.+. +|...+..-.+ ..|.+-|.++++.+
T Consensus 311 -~~v~~~~~~~~~~~l~sgs~D-~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 311 -DFVLSVATTQNDEYILSGSKD-RGVLFWDKKSGNPL 345 (393)
T ss_dssp -SCEEEEEECGGGCEEEEEETT-SEEEEEETTTCCEE
T ss_pred -CcEEEEEECCCCCEEEEEeCC-CeEEEEECCCCeEE
Confidence 123334443 44444555455 78888898887654
No 131
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.42 E-value=7.4e-05 Score=65.52 Aligned_cols=167 Identities=10% Similarity=-0.001 Sum_probs=114.0
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~ 171 (276)
+.+.++.. .......+.|+|++.++.+++ .+..|+.||++++.......-+..-.-..+++. ++.++...-.+++
T Consensus 88 ~~~~~~~~-h~~~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 88 EKVVDFEA-HPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp CEEEEEEC-CSSCEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred cEEEEEeC-CCCcEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 34555543 345678999999988777777 788999999998854443333333344567775 3466777778999
Q ss_pred EEEEeCCCCcEEEEEecCCCCee---EEee--CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-C
Q 023864 172 GFIYDQNNLNKLEEFTHQMKDGW---GLAT--DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~~~EGW---GLT~--Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-d 245 (276)
+.+||..+.+...++......+. .+.+ |++.|+....+..|.++|.++.+.+.++.-.. ..++-+.+. +
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~-----~~v~~~~~~p~ 239 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-----SNVSFAVFHPT 239 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS-----SCEEEEEECSS
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC-----CCEEEEEECCC
Confidence 99999988877766654321222 2333 66777777678899999999998887765432 123344454 4
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v 269 (276)
+.+.|..-.+ ..|.+-|.++++.
T Consensus 240 ~~~l~s~s~D-g~i~iWd~~~~~~ 262 (304)
T 2ynn_A 240 LPIIISGSED-GTLKIWNSSTYKV 262 (304)
T ss_dssp SSEEEEEETT-SCEEEEETTTCCE
T ss_pred CCEEEEEcCC-CeEEEEECCCCce
Confidence 5566666566 8899999988654
No 132
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.41 E-value=5.1e-05 Score=68.89 Aligned_cols=166 Identities=8% Similarity=0.008 Sum_probs=114.0
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFI 174 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V 174 (276)
++..+.......+..+.|++|+.++.+++ .+..|+.||+++++.+....-.... -..+++.++ ++...-.++.+.+
T Consensus 125 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~-~l~~~~~dg~i~i 200 (401)
T 4aez_A 125 VSALAETDESTYVASVKWSHDGSFLSVGL--GNGLVDIYDVESQTKLRTMAGHQAR-VGCLSWNRH-VLSSGSRSGAIHH 200 (401)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSC-EEEEEEETT-EEEEEETTSEEEE
T ss_pred EeEeeecCCCCCEEEEEECCCCCEEEEEC--CCCeEEEEECcCCeEEEEecCCCCc-eEEEEECCC-EEEEEcCCCCEEE
Confidence 44455544466678999999987666555 5678999999999988776533322 235666554 5555667899999
Q ss_pred EeCC-CCcEEEEEecCCCC--eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEEC-C-EEE
Q 023864 175 YDQN-NLNKLEEFTHQMKD--GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK-G-EVW 249 (276)
Q Consensus 175 ~D~~-tlk~i~~~~~~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~id-G-~ly 249 (276)
+|.. ..+.+..+.-...+ +..+++||+.|+....+..|.++|..+.+.+.++.-.. . .++-+.+.. | .++
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~--~---~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN--A---AVKAVAWCPWQSNLL 275 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS--S---CCCEEEECTTSTTEE
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc--c---eEEEEEECCCCCCEE
Confidence 9998 45566666532122 33356789999888778899999999988876654321 2 344455653 3 577
Q ss_pred EEeC--CCCCeEEEEeCCCCcEE
Q 023864 250 ANVW--QVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 250 ANvw--~s~d~I~vIDp~T~~v~ 270 (276)
+... .+ ..|.+.|..+++.+
T Consensus 276 ~~~~gs~d-~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 276 ATGGGTMD-KQIHFWNAATGARV 297 (401)
T ss_dssp EEECCTTT-CEEEEEETTTCCEE
T ss_pred EEecCCCC-CEEEEEECCCCCEE
Confidence 7654 45 89999999987654
No 133
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.40 E-value=1.1e-05 Score=72.39 Aligned_cols=168 Identities=9% Similarity=0.019 Sum_probs=114.0
Q ss_pred EEEEEE-ecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCE
Q 023864 94 QVVNEF-PHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~-Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~ 171 (276)
+.+..+ .| ......+.|++++.++.+++ .+..|+.||+++++.+....-... --..+++.. ++++...-.++.
T Consensus 130 ~~~~~~~~h--~~~v~~~~~~~~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 130 LQREIDQAH--VSEITKLKFFPSGEALISSS--QDMQLKIWSVKDGSNPRTLIGHRA-TVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp EEEEETTSS--SSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCCCEEEECCSS-CEEEEEEETTTTEEEEEETTSC
T ss_pred ceeeecccc--cCccEEEEECCCCCEEEEEe--CCCeEEEEeCCCCcCceEEcCCCC-cEEEEEEcCCCCEEEEEcCCCc
Confidence 455554 34 45567999999988777666 677999999999987666542222 234566653 344445567889
Q ss_pred EEEEeCCCCcEEEEEecC--CCC------------------------eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEE
Q 023864 172 GFIYDQNNLNKLEEFTHQ--MKD------------------------GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRK 225 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~--~~E------------------------GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~ 225 (276)
+.+||..+.+.+.++... ... ...+++||+.|+.......|.++|..+.+.+..
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 999999999999988642 001 112357888998888888999999999987766
Q ss_pred EEeeeCCEeeeeeeeeEEE-CCE-EEEEeCCCCCeEEEEeCCCCcEEE
Q 023864 226 DIVRYKGREVRNLNELEFI-KGE-VWANVWQVWPCIPYAYLQAFGSSL 271 (276)
Q Consensus 226 I~V~~~g~pv~~lNELE~i-dG~-lyANvw~s~d~I~vIDp~T~~v~l 271 (276)
+.... . ..++.+.+. +|. +++..-.+ ..|.+.|.++++..+
T Consensus 285 ~~~~~-~---~~v~~~~~~~~~~~~l~~g~~d-g~i~vwd~~~~~~~~ 327 (420)
T 3vl1_A 285 LPSKF-T---CSCNSLTVDGNNANYIYAGYEN-GMLAQWDLRSPECPV 327 (420)
T ss_dssp ECCTT-S---SCEEEEEECSSCTTEEEEEETT-SEEEEEETTCTTSCS
T ss_pred ccccc-C---CCceeEEEeCCCCCEEEEEeCC-CeEEEEEcCCCcCch
Confidence 64321 1 134555665 343 44444456 899999999876433
No 134
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.40 E-value=8.8e-05 Score=67.92 Aligned_cols=167 Identities=13% Similarity=0.026 Sum_probs=113.3
Q ss_pred eEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTG 172 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v 172 (276)
.+.+.++.. .......+.+ ++..+.+++ .+..|+.||+.+++.+....-.. .....+...++.|+ ..-.++.+
T Consensus 269 ~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~-~~~~dg~i 341 (445)
T 2ovr_B 269 ETCLHTLQG-HTNRVYSLQF--DGIHVVSGS--LDTSIRVWDVETGNCIHTLTGHQ-SLTSGMELKDNILV-SGNADSTV 341 (445)
T ss_dssp TEEEEEECC-CSSCEEEEEE--CSSEEEEEE--TTSCEEEEETTTCCEEEEECCCC-SCEEEEEEETTEEE-EEETTSCE
T ss_pred CcEeEEecC-CCCceEEEEE--CCCEEEEEe--CCCeEEEEECCCCCEEEEEcCCc-ccEEEEEEeCCEEE-EEeCCCeE
Confidence 356666653 2345578888 455445555 57889999999999887765332 23456777776554 44578899
Q ss_pred EEEeCCCCcEEEEEecC---CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEE
Q 023864 173 FIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVW 249 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~---~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~ly 249 (276)
.+||..+.+.+.++... ...=..++.+++.|+.+..+..|.++|.++++.++.+.....+..-..++-+.+..+..+
T Consensus 342 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 421 (445)
T 2ovr_B 342 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLV 421 (445)
T ss_dssp EEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEE
T ss_pred EEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEE
Confidence 99999999999999742 123456888999888887788999999999999988865332222234555667755544
Q ss_pred EEeCCCCCe----EEEEeCCC
Q 023864 250 ANVWQVWPC----IPYAYLQA 266 (276)
Q Consensus 250 ANvw~s~d~----I~vIDp~T 266 (276)
+.+...+.. |.++|-..
T Consensus 422 la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 422 CAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEECSSSSSCCEEEEEECCC
T ss_pred EEEcccCCCCccEEEEEECCC
Confidence 333333143 88888664
No 135
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.40 E-value=1e-05 Score=73.16 Aligned_cols=159 Identities=10% Similarity=0.052 Sum_probs=110.0
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCc-------EEEEeecCCCceEEEEEEeCC--EEEEEEeeCCEEE
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGK-------VEAINQMEGSYFGEGLTLLGE--KLFQVTWLQKTGF 173 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgk-------v~~~~~l~~~~FgEGit~~g~--~LyqlTwk~~~v~ 173 (276)
..-...+.|++ ++.++.+++ .+..|+.||+++++ .+....-. .---..+++..+ .++...-.++.+.
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s--~dg~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGS--EDCTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEE--TTSEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred CCCEEEEEeCCCCCCEEEEEe--CCCeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 44567999999 777777766 67889999999983 23332211 122345666543 5666677889999
Q ss_pred EEeCCCCcEEEEEe--cCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEE
Q 023864 174 IYDQNNLNKLEEFT--HQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEV 248 (276)
Q Consensus 174 V~D~~tlk~i~~~~--~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~l 248 (276)
+||..+.+.+.++. .... ....+++||+.|+.+..+..|.++|+.+.+.+..+.....+. .+..+.+. +|.+
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT---RPVHAVFVSEGKI 234 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS---SCCEEEECSTTEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC---cceEEEEcCCCcE
Confidence 99999999999983 2111 233466799999998888999999999999887774332222 12334454 6776
Q ss_pred EEEe---CCCCCeEEEEeCCCCcE
Q 023864 249 WANV---WQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 249 yANv---w~s~d~I~vIDp~T~~v 269 (276)
++.. -.. ..|.+.|..+++.
T Consensus 235 l~~g~~~~~d-~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 235 LTTGFSRMSE-RQVALWDTKHLEE 257 (402)
T ss_dssp EEEEECTTCC-EEEEEEETTBCSS
T ss_pred EEEeccCCCC-ceEEEEcCccccC
Confidence 6555 355 7899999988664
No 136
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=3.8e-06 Score=82.78 Aligned_cols=158 Identities=13% Similarity=0.104 Sum_probs=102.8
Q ss_pred ceEEEE-------ecCCE-EEEEcCCCC----CCeEEEEeCCC-CcEE-----EEeecCCCceEEEEEEe--CCEEEEEE
Q 023864 107 TQGLLY-------AENDT-LFESTGLYG----RSSVRRVALET-GKVE-----AINQMEGSYFGEGLTLL--GEKLFQVT 166 (276)
Q Consensus 107 TQGL~~-------~~dg~-LyeStG~yg----~S~I~~iDl~t-gkv~-----~~~~l~~~~FgEGit~~--g~~LyqlT 166 (276)
..+|.| +++|. ||.+.-.++ ...|.+++.+. |++. +.+.-..+++ |++++ ++.||+.+
T Consensus 188 p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~--giavdp~~g~LYvtd 265 (496)
T 3kya_A 188 IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCN--GATIHPINGELYFNS 265 (496)
T ss_dssp EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCC--CEEECTTTCCEEEEE
T ss_pred CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCce--EEEEcCCCCeEEEEE
Confidence 468999 88875 998755332 23588887655 4442 2222223554 66776 48999999
Q ss_pred eeCCEEEEEeCC-------CCcE-----------EEE-EecC---CCCeeEEeeCCCEEEEEC-CCceEEEEcC--CCCc
Q 023864 167 WLQKTGFIYDQN-------NLNK-----------LEE-FTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDP--QTLK 221 (276)
Q Consensus 167 wk~~~v~V~D~~-------tlk~-----------i~~-~~~~---~~EGWGLT~Dg~~L~vSD-GS~~L~viDp--~t~~ 221 (276)
+.++++++||++ +.+. +++ +..+ .+.|..+.+||+.||++| +.++|+.+|+ .+.+
T Consensus 266 ~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~ 345 (496)
T 3kya_A 266 YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKE 345 (496)
T ss_dssp TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred CCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcce
Confidence 999999999987 5543 233 3333 234566788999999999 7999999765 4443
Q ss_pred EEE-EEEeee-------CC----EeeeeeeeeEEE---------CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 222 VIR-KDIVRY-------KG----REVRNLNELEFI---------KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 222 vi~-~I~V~~-------~g----~pv~~lNELE~i---------dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
+.. ++-.+. +| -.+.++....++ +|.||++-+.. ++|.+||| +|.
T Consensus 346 ~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N-~rIr~i~~-~G~ 411 (496)
T 3kya_A 346 FITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN-FCVRKVTP-EGI 411 (496)
T ss_dssp ECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG-TEEEEECT-TCB
T ss_pred ecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC-CEEEEEeC-CCC
Confidence 311 122222 12 123345544444 36899999999 99999996 554
No 137
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.38 E-value=4.4e-05 Score=69.96 Aligned_cols=155 Identities=15% Similarity=0.004 Sum_probs=100.8
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEEE
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i~ 184 (276)
.....+.+ ++.++.+++ .+..|+.||+++++.+....-... --..+.+.+..+ ...-.++.+.+||..+.+.+.
T Consensus 240 ~~v~~~~~--~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 240 AAVRCVQY--DGRRVVSGA--YDFMVKVWDPETETCLHTLQGHTN-RVYSLQFDGIHV-VSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp SCEEEEEE--CSSCEEEEE--TTSCEEEEEGGGTEEEEEECCCSS-CEEEEEECSSEE-EEEETTSCEEEEETTTCCEEE
T ss_pred ccEEEEEE--CCCEEEEEc--CCCEEEEEECCCCcEeEEecCCCC-ceEEEEECCCEE-EEEeCCCeEEEEECCCCCEEE
Confidence 33456666 344344444 456788888888777666543222 234555544444 444568889999999999988
Q ss_pred EEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeee-CCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEe
Q 023864 185 EFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFIKGEVWANVWQVWPCIPYAY 263 (276)
Q Consensus 185 ~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~-~g~pv~~lNELE~idG~lyANvw~s~d~I~vID 263 (276)
++......-..++.+++.|+....+..|.++|..+.+.+.++.... ... .++-+.+.+..|. ..-.+ ..|.+.|
T Consensus 314 ~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~l~-s~~~d-g~v~iwd 388 (445)
T 2ovr_B 314 TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS---AVTCLQFNKNFVI-TSSDD-GTVKLWD 388 (445)
T ss_dssp EECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS---CEEEEEECSSEEE-EEETT-SEEEEEE
T ss_pred EEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC---CEEEEEECCCEEE-EEeCC-CeEEEEE
Confidence 8864333455678888888887778899999999998887775422 122 3444556444444 44456 8999999
Q ss_pred CCCCcEE
Q 023864 264 LQAFGSS 270 (276)
Q Consensus 264 p~T~~v~ 270 (276)
.++++.+
T Consensus 389 ~~~~~~~ 395 (445)
T 2ovr_B 389 LKTGEFI 395 (445)
T ss_dssp TTTCCEE
T ss_pred CCCCcee
Confidence 9997754
No 138
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.36 E-value=3.9e-05 Score=69.34 Aligned_cols=159 Identities=10% Similarity=-0.042 Sum_probs=109.8
Q ss_pred CCCceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEee-cCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQ-MEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~-l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tl 180 (276)
......+.|++++ .++.+++ .+..|+.||+++++.+.... .+..---..+++. ++.++...-.++.+.+||..+.
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAG--CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEE--TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCeEEEEEECcCCCCEEEEEc--CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 4556799999987 5776666 67789999999999887763 1222223456665 3455566668999999999999
Q ss_pred cEEEEEecC--C--CCeeEEeeCCCEEEEE---CCCceEEEEcCCCCcE-EEEEEeeeCCEeeeeeeeeEEE-CC-EEEE
Q 023864 181 NKLEEFTHQ--M--KDGWGLATDGKVLFGS---DGSSMLYQIDPQTLKV-IRKDIVRYKGREVRNLNELEFI-KG-EVWA 250 (276)
Q Consensus 181 k~i~~~~~~--~--~EGWGLT~Dg~~L~vS---DGS~~L~viDp~t~~v-i~~I~V~~~g~pv~~lNELE~i-dG-~lyA 250 (276)
+.+.++... . .....+++||+.|++. .....|.++|..+++. +....... .. .+..+.+. +| .|++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~---~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT-SS---GVLLPFFDPDTNIVYL 284 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC-CS---SCEEEEEETTTTEEEE
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC-CC---ceeEEEEcCCCCEEEE
Confidence 999988322 1 1334467888888886 5688999999998765 33333221 11 24445566 34 5666
Q ss_pred EeCCCCCeEEEEeCCCCcE
Q 023864 251 NVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 251 Nvw~s~d~I~vIDp~T~~v 269 (276)
.--.+ ..|.+.|.++++.
T Consensus 285 ~g~~d-g~i~i~d~~~~~~ 302 (402)
T 2aq5_A 285 CGKGD-SSIRYFEITSEAP 302 (402)
T ss_dssp EETTC-SCEEEEEECSSTT
T ss_pred EEcCC-CeEEEEEecCCCc
Confidence 65556 8999999999773
No 139
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.34 E-value=4.1e-06 Score=79.53 Aligned_cols=117 Identities=19% Similarity=0.238 Sum_probs=90.7
Q ss_pred eEEEE--ecC-CE--EEEEcCCCCCCeEEEEeC---C----CCcEEEEeecCCCceEEEEEEeC--CEEEEEEeeCCEEE
Q 023864 108 QGLLY--AEN-DT--LFESTGLYGRSSVRRVAL---E----TGKVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQKTGF 173 (276)
Q Consensus 108 QGL~~--~~d-g~--LyeStG~yg~S~I~~iDl---~----tgkv~~~~~l~~~~FgEGit~~g--~~LyqlTwk~~~v~ 173 (276)
.||++ +++ ++ +|++ + .+..+..|++ . +++++++.+++.. .|||.+++ ++||+..+..+ +.
T Consensus 131 yGlcly~~~~~g~~yafV~-~--k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq--~EgcvvDd~~g~Lyv~eEd~G-Iw 204 (355)
T 3amr_A 131 YGFTLYHSQKTGKYYAMVT-G--KEGEFEQYELKADKNGYISGKKVRAFKMNSQ--TEGMAADDEYGRLYIAEEDEA-IW 204 (355)
T ss_dssp CCEEEEECTTTCCEEEEEE-C--SSSEEEEEEEEECTTSCEEEEEEEEEECSSC--EEEEEEETTTTEEEEEETTTE-EE
T ss_pred eEEEEEecCCCCcEEEEEE-C--CCCeEEEEEEEeCCCCcccceEEEEecCCCC--cceEEEcCCCCeEEEecccce-EE
Confidence 49998 553 53 6664 3 3457777766 3 4467888899987 88999985 89999999855 89
Q ss_pred EEeCC-----CCcEEEEEecC----CCCeeEE--eeCCC-EEEEEC-CCceEEEEcCC-CCcEEEEEEeee
Q 023864 174 IYDQN-----NLNKLEEFTHQ----MKDGWGL--ATDGK-VLFGSD-GSSMLYQIDPQ-TLKVIRKDIVRY 230 (276)
Q Consensus 174 V~D~~-----tlk~i~~~~~~----~~EGWGL--T~Dg~-~L~vSD-GS~~L~viDp~-t~~vi~~I~V~~ 230 (276)
.||++ +.+++..+..+ -.||..| ++||+ +|++|+ |.+++.++|.+ +++.+.++.|+.
T Consensus 205 ~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~ 275 (355)
T 3amr_A 205 KFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITD 275 (355)
T ss_dssp EEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEECC
T ss_pred EEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEecC
Confidence 99965 56777776422 3689998 56777 899999 89999999997 899999999875
No 140
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.34 E-value=1.3e-05 Score=71.20 Aligned_cols=163 Identities=12% Similarity=0.014 Sum_probs=107.5
Q ss_pred CCceEEEEe----cCCEE-EEEcCCCCCCeEEEEeCCC------CcEEE-----Eeec------CCCceEEEEEEeCCEE
Q 023864 105 AFTQGLLYA----ENDTL-FESTGLYGRSSVRRVALET------GKVEA-----INQM------EGSYFGEGLTLLGEKL 162 (276)
Q Consensus 105 aFTQGL~~~----~dg~L-yeStG~yg~S~I~~iDl~t------gkv~~-----~~~l------~~~~FgEGit~~g~~L 162 (276)
.....+.|+ +++.+ +.+++ .+..|+.||+.+ ++.+. ...- ........+++..+.+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 199 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATD--VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL 199 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEE--TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSE
T ss_pred CcEEEEEEeeccCCCCceEEEEEe--CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCce
Confidence 566899999 88876 76666 567899999988 55433 3211 1111223566654336
Q ss_pred EEEEeeCCEEEEEeCCCCcEEEEEec-------C-CCCeeEEeeCCCEEEEECCC---ceEEEEcCCCCcEEEEEEeeeC
Q 023864 163 FQVTWLQKTGFIYDQNNLNKLEEFTH-------Q-MKDGWGLATDGKVLFGSDGS---SMLYQIDPQTLKVIRKDIVRYK 231 (276)
Q Consensus 163 yqlTwk~~~v~V~D~~tlk~i~~~~~-------~-~~EGWGLT~Dg~~L~vSDGS---~~L~viDp~t~~vi~~I~V~~~ 231 (276)
+...-.++.+.+||..+.+.+.++.. . .-....+++||+.|+++..+ ..|.++|..+.+.+..+.....
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~ 279 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTH 279 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--
T ss_pred EEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcc
Confidence 66666889999999999999998875 3 11233466799999887666 8999999999998887765110
Q ss_pred CE--------eeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 232 GR--------EVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 232 g~--------pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.. .-..++-+.+. +|..++....+ ..|.+.|.++++.+
T Consensus 280 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 280 SSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-GKLRFWDVKTKERI 326 (397)
T ss_dssp ------CCBSBSSCEEEEEECSSSSEEEEEETT-SEEEEEETTTTEEE
T ss_pred cccccccccccCCcEEEEEECCCCCEEEEEeCC-CeEEEEEcCCCcee
Confidence 00 01234556676 56555555566 89999999996543
No 141
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.34 E-value=0.00011 Score=65.52 Aligned_cols=168 Identities=10% Similarity=0.077 Sum_probs=115.1
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTG 172 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v 172 (276)
++..++.. .......+.|.+++.|+. ++ ++..|+.||+++++.+....-... --..+++.. +++++..-.++.+
T Consensus 134 ~~~~~~~~-h~~~v~~~~~~~~~~l~s-~s--~d~~i~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 134 RVSRELAG-HTGYLSCCRFLDDNQIVT-SS--GDTTCALWDIETGQQTTTFTGHTG-DVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp EEEEEEEC-CSSCEEEEEEEETTEEEE-EE--TTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTSCE
T ss_pred eeEEEecC-CCccEEEEEECCCCcEEE-EE--CCCcEEEEECCCCcEEEEEcCCCC-ceEEEEECCCCCEEEEEeCCCcE
Confidence 45555543 345667899998888663 44 578899999999988776542222 234566653 5677777789999
Q ss_pred EEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEE
Q 023864 173 FIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVW 249 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~ly 249 (276)
.+||..+.+.+.++.-... ....+++||+.|+....+..|.++|..+.+.+....... ....++.+.+. +|.+.
T Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~---~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN---IICGITSVSFSKSGRLL 285 (340)
T ss_dssp EEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT---CCSCEEEEEECTTSSEE
T ss_pred EEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC---cccceEEEEECCCCCEE
Confidence 9999999999888863211 234467899998887778899999999987765543221 11234445565 56666
Q ss_pred EEeCCCCCeEEEEeCCCCcEE
Q 023864 250 ANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 250 ANvw~s~d~I~vIDp~T~~v~ 270 (276)
+.-..+ ..|.+-|..+++..
T Consensus 286 ~~g~~d-~~i~vwd~~~~~~~ 305 (340)
T 1got_B 286 LAGYDD-FNCNVWDALKADRA 305 (340)
T ss_dssp EEEETT-SEEEEEETTTCCEE
T ss_pred EEECCC-CeEEEEEcccCcEe
Confidence 665566 78999998886543
No 142
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.33 E-value=3.1e-05 Score=72.97 Aligned_cols=158 Identities=13% Similarity=0.069 Sum_probs=107.8
Q ss_pred CceEEEE---ecCCEEEEEcC---------C--CCCCeEEEEeCC---CCcEEEEeecCC-----------Cc-eEEEEE
Q 023864 106 FTQGLLY---AENDTLFESTG---------L--YGRSSVRRVALE---TGKVEAINQMEG-----------SY-FGEGLT 156 (276)
Q Consensus 106 FTQGL~~---~~dg~LyeStG---------~--yg~S~I~~iDl~---tgkv~~~~~l~~-----------~~-FgEGit 156 (276)
...||.+ +++|+||.... . -|.+.|.+||+. |++++..+.|.. .+ .+.+++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 3469999 68899987421 0 146889999999 999888777641 33 478999
Q ss_pred EeC-CEEEEEEeeC-CEEEEEeCCCCcEEEEEecCC--------CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEE
Q 023864 157 LLG-EKLFQVTWLQ-KTGFIYDQNNLNKLEEFTHQM--------KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKD 226 (276)
Q Consensus 157 ~~g-~~LyqlTwk~-~~v~V~D~~tlk~i~~~~~~~--------~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I 226 (276)
++. +.+|+..-.. +.++.+|++..+. ..+-... .-|..+++||+.|++.++..+|+.+|..+... ..|
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~~~-~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~-~~v 221 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGKTV-STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYA-WPE 221 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSCCE-EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSC-CCE
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCCEE-eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcc-eee
Confidence 985 7999999899 9999999986643 3332111 34888899999999999999999999884321 135
Q ss_pred EeeeCC--Eeeeeeeee-EE-ECCEE-EEEeCCCCCeEEEEeCCC
Q 023864 227 IVRYKG--REVRNLNEL-EF-IKGEV-WANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 227 ~V~~~g--~pv~~lNEL-E~-idG~l-yANvw~s~d~I~vIDp~T 266 (276)
.+...| .....+.-| -. .+|++ ++..... +.+++-+...
T Consensus 222 ~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~-~~~~l~S~Dg 265 (334)
T 2p9w_A 222 PVKINGDFGTLSGTEKIVTVPVGNESVLVGARAP-YAISFRSWDN 265 (334)
T ss_dssp ECEESSCCCCCTTEEEEEEEEETTEEEEEEEETT-EEEEEECSST
T ss_pred cccccCCcccccCcccccccccCCEEEEEEcCCC-CEEEEECCCC
Confidence 553212 122333333 11 47875 7777655 5555555443
No 143
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.33 E-value=7.4e-05 Score=66.90 Aligned_cols=164 Identities=10% Similarity=0.070 Sum_probs=111.9
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC--CceEEEEEE---------------
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG--SYFGEGLTL--------------- 157 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~--~~FgEGit~--------------- 157 (276)
.+.++.. .......+.|++|+.++.+++ .+..|+.||+.+++.+....... ...-..+++
T Consensus 173 ~~~~~~~-h~~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 173 NPRTLIG-HRATVTDIAIIDRGRNVLSAS--LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp CCEEEEC-CSSCEEEEEEETTTTEEEEEE--TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred CceEEcC-CCCcEEEEEEcCCCCEEEEEc--CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 3445542 245568999999987666666 67789999999999888775431 111122222
Q ss_pred -------eCCEEEEEEeeCCEEEEEeCCCCcEEEEEecCC-CC--eeEEeeCCC-EEEEECCCceEEEEcCCCCcE-EEE
Q 023864 158 -------LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM-KD--GWGLATDGK-VLFGSDGSSMLYQIDPQTLKV-IRK 225 (276)
Q Consensus 158 -------~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~-~E--GWGLT~Dg~-~L~vSDGS~~L~viDp~t~~v-i~~ 225 (276)
.++++....-.++.+.+||..+.+.+.++.... .. ...+++||+ .|+....+..|.++|..+.+. +..
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~ 329 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGE 329 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhh
Confidence 135566666778999999999999988886431 12 233567888 777777788999999998754 555
Q ss_pred EEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCC
Q 023864 226 DIVRYKGREVRNLNELEFIKGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 226 I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T 266 (276)
+... .+.+ ++-+.+.+|.++|..-.+ ..|.+-|..+
T Consensus 330 ~~~~-~~~~---v~~~~~~~~~~l~s~~~d-~~v~iw~~~~ 365 (420)
T 3vl1_A 330 FLIN-EGTP---INNVYFAAGALFVSSGFD-TSIKLDIISD 365 (420)
T ss_dssp EEES-TTSC---EEEEEEETTEEEEEETTT-EEEEEEEECC
T ss_pred hhcc-CCCC---ceEEEeCCCCEEEEecCC-ccEEEEeccC
Confidence 5442 2333 344457788877777666 7888888765
No 144
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.33 E-value=2.1e-05 Score=73.13 Aligned_cols=157 Identities=16% Similarity=0.088 Sum_probs=97.0
Q ss_pred CCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC--CEEEEEeCCCCc
Q 023864 105 AFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ--KTGFIYDQNNLN 181 (276)
Q Consensus 105 aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~--~~v~V~D~~tlk 181 (276)
.....+.|+|||+ |+.++..-+...|..||+++|+.......+....+-.+..++++|+.....+ ..++++|.++.+
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 4557899999986 4333322245799999999998765444444433333333456677565543 459999999877
Q ss_pred EEEEEe-cC-CCCeeEEeeCCCEEEE-EC--CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCC
Q 023864 182 KLEEFT-HQ-MKDGWGLATDGKVLFG-SD--GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ 254 (276)
Q Consensus 182 ~i~~~~-~~-~~EGWGLT~Dg~~L~v-SD--GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~ 254 (276)
. .++. .. ......+++||+.|+. ++ |..+|+++|.++.+... +...+. ....+.+. || +|+.....
T Consensus 259 ~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~---l~~~~~---~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 259 I-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR---ITWEGS---QNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp E-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE---CCCSSS---EEEEEEECTTSSEEEEEEEC
T ss_pred E-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE---EecCCC---cccCeEECCCCCEEEEEECc
Confidence 6 3332 21 1123346789997765 54 46699999999887532 222222 23344554 55 45544433
Q ss_pred --CCCeEEEEeCCCCcE
Q 023864 255 --VWPCIPYAYLQAFGS 269 (276)
Q Consensus 255 --s~d~I~vIDp~T~~v 269 (276)
. ..|.++|+++++.
T Consensus 332 ~g~-~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 332 GGQ-QHIAKQDLATGGV 347 (415)
T ss_dssp SSC-EEEEEEETTTCCE
T ss_pred CCc-eEEEEEECCCCCE
Confidence 3 4899999999775
No 145
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.33 E-value=3.9e-05 Score=75.05 Aligned_cols=164 Identities=9% Similarity=-0.034 Sum_probs=112.1
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~ 173 (276)
+.+++.. ......++.|+|||.++.+++ .+..|+.||.++|+.+......... -.++++.. ++..+....++.+.
T Consensus 5 ~~~~~~~-h~~~v~~i~~sp~~~~la~~~--~~g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 5 IKKTFSN-RSDRVKGIDFHPTEPWVLTTL--YSGRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CEEEEEE-ECSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETTSEEE
T ss_pred cceeeec-CCCceEEEEECCCCCEEEEEe--CCCEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCCCeEE
Confidence 3444432 244568999999988766555 5678999999999988877644332 23555543 34444555689999
Q ss_pred EEeCCCCcEEEEEecCCCC--eeEEeeCCCEEEEECCCceEEEEcCCCC-cEEEEEEeeeCCEeeeeeeeeEEE--CCEE
Q 023864 174 IYDQNNLNKLEEFTHQMKD--GWGLATDGKVLFGSDGSSMLYQIDPQTL-KVIRKDIVRYKGREVRNLNELEFI--KGEV 248 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~-~vi~~I~V~~~g~pv~~lNELE~i--dG~l 248 (276)
+||..+.+.+.++...... ...+++||+.|+.+..+..|.++|.++. +....+.-. .. .+.-+.|. +|..
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~~---~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGH--EH---FVMCVAFNPKDPST 155 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECC--SS---CEEEEEEETTEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCC--CC---cEEEEEEEcCCCCE
Confidence 9999999999998743122 2346689999998887889999999887 443333322 12 34455676 4566
Q ss_pred EEEeCCCCCeEEEEeCCCCc
Q 023864 249 WANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 249 yANvw~s~d~I~vIDp~T~~ 268 (276)
++..-.+ ..|.+.|..+++
T Consensus 156 l~~~~~d-g~v~vwd~~~~~ 174 (814)
T 3mkq_A 156 FASGCLD-RTVKVWSLGQST 174 (814)
T ss_dssp EEEEETT-SEEEEEETTCSS
T ss_pred EEEEeCC-CeEEEEECCCCc
Confidence 6666566 888888887754
No 146
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.33 E-value=2.2e-05 Score=69.33 Aligned_cols=171 Identities=9% Similarity=0.008 Sum_probs=106.4
Q ss_pred eEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeC----CCCc------EEEEeec--CC-------CceE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVAL----ETGK------VEAINQM--EG-------SYFG 152 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl----~tgk------v~~~~~l--~~-------~~Fg 152 (276)
.++++...|.... ..+.|+|+|. ++.+++ .+..|+.||+ ++++ ......- .. .---
T Consensus 36 ~~~~~~~~~~~~v--~~~~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (425)
T 1r5m_A 36 VKILKEIVKLDNI--VSSTWNPLDESILAYGE--KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQV 111 (425)
T ss_dssp CEECEEEEECSCC--SEEEECSSCTTEEEEEE--TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCE
T ss_pred hhheeeeeccCce--EEEEECCCCCcEEEEec--CCceEEEEEEecccCCccccccccccccccccccccccccCCCCce
Confidence 3566777774444 5999999988 777666 6789999999 9988 3333322 11 1122
Q ss_pred EEEEEeC-CEEEEEEeeCCEEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEee
Q 023864 153 EGLTLLG-EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 153 EGit~~g-~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~ 229 (276)
..+++.. ++++...-.++.+.+|| .+.+.+..+..... ....+++|++.|+.......|.++|.++.+.+..+...
T Consensus 112 ~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 3455542 44555555688999999 67778888763312 23346679999999888889999999999988877665
Q ss_pred eCCEee----------eeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 230 YKGREV----------RNLNELEFIKGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 230 ~~g~pv----------~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
...... ..+..+.+.++..++..-.. ..|.+.|.++++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~i~~~d~~~~~~ 239 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-GAIFVYQITEKTP 239 (425)
T ss_dssp ---------------CCCBSCCEEEETTEEEEECGG-GCEEEEETTCSSC
T ss_pred ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-CeEEEEEcCCCce
Confidence 422100 00444555544334444455 7888888887553
No 147
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.32 E-value=0.00015 Score=66.47 Aligned_cols=163 Identities=11% Similarity=0.044 Sum_probs=110.7
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~ 173 (276)
+.+.+++. ...-...+.+ ++.++.+++ .+..|++||+++++.+....-... --..++..++.+ +..-.++.+.
T Consensus 164 ~~~~~~~~-h~~~v~~l~~--~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~l-~s~s~dg~i~ 236 (435)
T 1p22_A 164 ECKRILTG-HTGSVLCLQY--DERVIITGS--SDSTVRVWDVNTGEMLNTLIHHCE-AVLHLRFNNGMM-VTCSKDRSIA 236 (435)
T ss_dssp CEEEEECC-CSSCEEEEEC--CSSEEEEEE--TTSCEEEEESSSCCEEEEECCCCS-CEEEEECCTTEE-EEEETTSCEE
T ss_pred eEEEEEcC-CCCcEEEEEE--CCCEEEEEc--CCCeEEEEECCCCcEEEEEcCCCC-cEEEEEEcCCEE-EEeeCCCcEE
Confidence 45566652 2344567777 455555555 678999999999998877654332 234566666644 4445789999
Q ss_pred EEeCCCCcEEE---EEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEE
Q 023864 174 IYDQNNLNKLE---EFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWA 250 (276)
Q Consensus 174 V~D~~tlk~i~---~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyA 250 (276)
+||..+.+.+. .+.-....-..++.|++.|+....+..|.++|.++++.+.++.-.. . .+.-+.+.++.+++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~---~v~~~~~~~~~l~~ 311 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK--R---GIACLQYRDRLVVS 311 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS--S---CEEEEEEETTEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC--C---cEEEEEeCCCEEEE
Confidence 99998887653 2321123445678899999998888999999999999988876432 2 23445565555554
Q ss_pred EeCCCCCeEEEEeCCCCcEE
Q 023864 251 NVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 251 Nvw~s~d~I~vIDp~T~~v~ 270 (276)
.- .+ +.|.+.|.++++.+
T Consensus 312 g~-~d-g~i~iwd~~~~~~~ 329 (435)
T 1p22_A 312 GS-SD-NTIRLWDIECGACL 329 (435)
T ss_dssp EE-TT-SCEEEEETTTCCEE
T ss_pred Ee-CC-CeEEEEECCCCCEE
Confidence 43 56 89999999997654
No 148
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.31 E-value=9.7e-05 Score=71.67 Aligned_cols=167 Identities=16% Similarity=0.125 Sum_probs=117.4
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec------CCCceEEEEEEeC-CEEEEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM------EGSYFGEGLTLLG-EKLFQVT 166 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l------~~~~FgEGit~~g-~~LyqlT 166 (276)
+.+.++.. ....+..+.|+|||+++.+++ .+..|+.||..+|+.+....- +..---.++++.. ++.....
T Consensus 181 ~~~~~l~~-H~~~V~~v~fspdg~~las~s--~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 181 KFKSTFGE-HTKFVHSVRYNPDGSLFASTG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 257 (611)
T ss_dssp EEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred eEeeeecc-ccCceEEEEECCCCCEEEEEE--CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEE
Confidence 45556642 356788999999999888887 788999999999988766532 2222334666653 4445555
Q ss_pred eeCCEEEEEeCCCCcEEEEEecC---CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEE
Q 023864 167 WLQKTGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (276)
Q Consensus 167 wk~~~v~V~D~~tlk~i~~~~~~---~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~ 243 (276)
-.++++.++|..+.+.+.+++.+ ....+++..+++.|+.......+.++|+++.+..+.+. |+. ..++-+.+
T Consensus 258 s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~----gh~-~~v~~l~~ 332 (611)
T 1nr0_A 258 SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRY----GHN-KAITALSS 332 (611)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEEC----CCS-SCEEEEEE
T ss_pred eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc----CCC-CCEEEEEE
Confidence 67899999999999999998753 12456677788888776677889999999887544332 221 23455566
Q ss_pred E-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 244 I-KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 244 i-dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
. ||+..|..-.+ ..|.+-|.++++.
T Consensus 333 spdg~~l~s~s~D-~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 333 SADGKTLFSADAE-GHINSWDISTGIS 358 (611)
T ss_dssp CTTSSEEEEEETT-SCEEEEETTTCCE
T ss_pred eCCCCEEEEEeCC-CcEEEEECCCCce
Confidence 5 56655555566 8899999888654
No 149
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.31 E-value=6.8e-06 Score=74.48 Aligned_cols=157 Identities=11% Similarity=0.042 Sum_probs=110.7
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
...+..+.|++||+++.+++ .+..|+.||+++++.+....-... .-..+++. ++.+++..-.++.+.+||..+.+
T Consensus 139 ~~~V~~v~~spdg~~l~sgs--~dg~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 139 DDIVKTLSVFSDGTQAVSGG--KDFSVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp SSCEEEEEECSSSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred CCCEEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 45567999999998777777 678899999999998877654332 22355554 45677778889999999999998
Q ss_pred EEEEEecCCCC--eeE--EeeCCCEEE-EECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCC
Q 023864 182 KLEEFTHQMKD--GWG--LATDGKVLF-GSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ 254 (276)
Q Consensus 182 ~i~~~~~~~~E--GWG--LT~Dg~~L~-vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~ 254 (276)
.+..+.....+ -.. +.||+..++ ....+..|.++|..+.+.++++.... ..++-|.+. +| ++.|..-.
T Consensus 216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-----~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-----QNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-----SCEEEEEECSSSSCCEEEEET
T ss_pred eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-----eeEEEEEEcCCCCCEEEEEeC
Confidence 88776543112 223 456765544 45567889999999998877765433 234556664 44 56666655
Q ss_pred CCCeEEEEeCCCCcE
Q 023864 255 VWPCIPYAYLQAFGS 269 (276)
Q Consensus 255 s~d~I~vIDp~T~~v 269 (276)
+ ..|.+-|.++++.
T Consensus 291 D-~~i~iwd~~~~~~ 304 (357)
T 4g56_B 291 D-CTVAVLDADFSEV 304 (357)
T ss_dssp T-SCEEEECTTSCEE
T ss_pred C-CEEEEEECCCCcE
Confidence 6 7899999998653
No 150
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.31 E-value=2.9e-05 Score=71.50 Aligned_cols=158 Identities=9% Similarity=0.053 Sum_probs=114.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCcE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNK 182 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk~ 182 (276)
..-+..+.|+|++.++.+++ .+..|++||+++++......-... .-..+++.. +++....-.++++.+||..+.+.
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s--~Dg~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSAS--EDATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEE--SSSCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred CCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 44567899999988888777 778999999999988776543322 234566653 45666666789999999999999
Q ss_pred EEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeE
Q 023864 183 LEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPCI 259 (276)
Q Consensus 183 i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I 259 (276)
+.++.-... ....+.+||+.|+....+..|.++|.++.+.++++.-.. . .++-+.+. +|.++|..-.+ ..|
T Consensus 185 ~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~--~---~v~~~~~~~~g~~l~s~s~D-~~v 258 (410)
T 1vyh_C 185 IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR--E---WVRMVRPNQDGTLIASCSND-QTV 258 (410)
T ss_dssp EECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS--S---CEEEEEECTTSSEEEEEETT-SCE
T ss_pred eEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC--c---cEEEEEECCCCCEEEEEcCC-CeE
Confidence 888753211 234467899999887788999999999998877765322 1 23334444 56777777667 899
Q ss_pred EEEeCCCCcEE
Q 023864 260 PYAYLQAFGSS 270 (276)
Q Consensus 260 ~vIDp~T~~v~ 270 (276)
.+.|..+++..
T Consensus 259 ~vwd~~~~~~~ 269 (410)
T 1vyh_C 259 RVWVVATKECK 269 (410)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcee
Confidence 99999986643
No 151
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.30 E-value=5.6e-05 Score=69.65 Aligned_cols=158 Identities=12% Similarity=0.162 Sum_probs=99.6
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC----CCceEEEEEEeCC-----E
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME----GSYFGEGLTLLGE-----K 161 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~----~~~FgEGit~~g~-----~ 161 (276)
++++++.+ .-....|++|++||+||++.- . ..|.+++ +|+......++ ..-...||+++.+ .
T Consensus 21 ~~~~~va~----~l~~P~~ia~~pdG~l~V~e~--~-g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~ 91 (352)
T 2ism_A 21 LRVEEVVG----GLEVPWALAFLPDGGMLIAER--P-GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPY 91 (352)
T ss_dssp CCEEEEEC----CCSCEEEEEECTTSCEEEEET--T-TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCE
T ss_pred cEEEEEEC----CCCCceEEEEcCCCeEEEEeC--C-CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCE
Confidence 35555554 122345999999999998754 2 7899999 55532222222 2335679999865 9
Q ss_pred EEEEEeeC-----CEEEEEeCCCC-----cE-EEEEec--C---CCCeeEEeeCCCEEEEECCC--------------ce
Q 023864 162 LFQVTWLQ-----KTGFIYDQNNL-----NK-LEEFTH--Q---MKDGWGLATDGKVLFGSDGS--------------SM 211 (276)
Q Consensus 162 LyqlTwk~-----~~v~V~D~~tl-----k~-i~~~~~--~---~~EGWGLT~Dg~~L~vSDGS--------------~~ 211 (276)
||+..... +++..++.+.- +. +..++. . .+.+..+.+|| +||+++|+ .+
T Consensus 92 lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~ 170 (352)
T 2ism_A 92 VYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGK 170 (352)
T ss_dssp EEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSE
T ss_pred EEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceE
Confidence 99998865 78999987642 22 233552 1 23456677888 79999874 36
Q ss_pred EEEEcCCCCcE-------------EEEEEeeeCCEeeeeeeeeEEE--CCEEEEEeCCCCC--------eEEEEeCC
Q 023864 212 LYQIDPQTLKV-------------IRKDIVRYKGREVRNLNELEFI--KGEVWANVWQVWP--------CIPYAYLQ 265 (276)
Q Consensus 212 L~viDp~t~~v-------------i~~I~V~~~g~pv~~lNELE~i--dG~lyANvw~s~d--------~I~vIDp~ 265 (276)
|..+|++. ++ ...+.. -..+++.|.+. +|+||++.... + .|-+|.+.
T Consensus 171 I~ri~~dG-~~p~~npf~~~~~~~~~i~a~-----G~rnp~g~a~d~~~g~l~v~d~g~-~~~~~~~~dei~~i~~G 240 (352)
T 2ism_A 171 ILRLTPEG-EPAPGNPFLGRRGARPEVYSL-----GHRNPQGLAWHPKTGELFSSEHGP-SGEQGYGHDEVNLIVPG 240 (352)
T ss_dssp EEEECTTS-SBCTTCTTTTCTTSCTTEEEE-----CCSEECCCEECTTTCCEEEEEECC-------CCCEEEEECTT
T ss_pred EEEEcCCC-CCCCCCcccCCCCCCccEEEE-----cCCCcccEEEECCCCCEEEEEcCC-CCCCCCCCeEEEEeccC
Confidence 78888763 11 000111 13477888887 57899776655 4 47777653
No 152
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.29 E-value=3.5e-05 Score=70.12 Aligned_cols=164 Identities=10% Similarity=0.047 Sum_probs=111.5
Q ss_pred eEEEEEEecCCCCCceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEe--CCEEEEEEee
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLL--GEKLFQVTWL 168 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~--g~~LyqlTwk 168 (276)
-+.+.++.. ....+..+.|++++ .++.|++ .+..|+.||+.+++...+..... ......+++. ++++++..-.
T Consensus 159 ~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 159 QVVLSSYRA-HAAQVTCVAASPHKDSVFLSCS--EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TEEEEEECC-CSSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CcEEEEEcC-cCCceEEEEecCCCCCceeeec--cccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 356666652 35566799999886 4777777 67899999999999877764432 2334566664 4677777788
Q ss_pred CCEEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI- 244 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i- 244 (276)
++.+.+||..+.+.+.++..... ....+++||..+++|- .+.+|.++|.++.++.+. .|+. ..++-+.|.
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-----~~H~-~~V~~v~~sp 309 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-----QAHR-DFVRDATWSP 309 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-----CCCS-SCEEEEEECS
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-----cCCC-CCEEEEEEeC
Confidence 99999999999999999874312 2334568887666543 467899999999876532 2221 245666775
Q ss_pred CC-EEEEEeCCCCCeEEEEeCCC
Q 023864 245 KG-EVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 245 dG-~lyANvw~s~d~I~vIDp~T 266 (276)
+| ++.|..-.+ ..|.+=+..+
T Consensus 310 ~~~~llas~s~D-~~v~~w~v~~ 331 (344)
T 4gqb_B 310 LNHSLLTTVGWD-HQVVHHVVPT 331 (344)
T ss_dssp SSTTEEEEEETT-SCEEEEECCC
T ss_pred CCCeEEEEEcCC-CeEEEEECCC
Confidence 44 588877666 7887777665
No 153
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.29 E-value=4e-05 Score=75.53 Aligned_cols=160 Identities=9% Similarity=0.074 Sum_probs=107.3
Q ss_pred ceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCc----eEEEEEEeCCEEEEEEee-----CCEEEEEeC
Q 023864 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----FGEGLTLLGEKLFQVTWL-----QKTGFIYDQ 177 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~----FgEGit~~g~~LyqlTwk-----~~~v~V~D~ 177 (276)
..|+.+. ++++|..+. +..|..+|.+||+++-+.+++... +...-++.++++|+.+.. ++.++.+|+
T Consensus 108 ~~~~~~~-~~~v~v~~~---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~ 183 (571)
T 2ad6_A 108 DRGLAYG-AGQIVKKQA---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDL 183 (571)
T ss_dssp CCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEET
T ss_pred ccccEEE-CCEEEEEeC---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEEC
Confidence 3577887 589998754 568999999999998888776521 111224568999998875 689999999
Q ss_pred CCCcEEEEEecCCCC-------------------------------------ee---EEeeCCCEEEEECCC--------
Q 023864 178 NNLNKLEEFTHQMKD-------------------------------------GW---GLATDGKVLFGSDGS-------- 209 (276)
Q Consensus 178 ~tlk~i~~~~~~~~E-------------------------------------GW---GLT~Dg~~L~vSDGS-------- 209 (276)
+|.+++-++....+. -| .+.++...+|+..|.
T Consensus 184 ~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~ 263 (571)
T 2ad6_A 184 KTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETM 263 (571)
T ss_dssp TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGG
T ss_pred CCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCc
Confidence 999999998753111 01 234455788887642
Q ss_pred --------ceEEEEcCCCCcEEEEEEeeeCCE-eeeeeeeeEE----ECCE---EEEEeCCCCCeEEEEeCCCCcEEE
Q 023864 210 --------SMLYQIDPQTLKVIRKDIVRYKGR-EVRNLNELEF----IKGE---VWANVWQVWPCIPYAYLQAFGSSL 271 (276)
Q Consensus 210 --------~~L~viDp~t~~vi~~I~V~~~g~-pv~~lNELE~----idG~---lyANvw~s~d~I~vIDp~T~~v~l 271 (276)
+.|+.+|++|++++-+.++..+.. .....++... +||+ +++-.=.. ..+.+||++||+++-
T Consensus 264 ~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~-G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 264 RPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRN-GILYTLNRENGNLIV 340 (571)
T ss_dssp SCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTT-SEEEEEETTTCCEEE
T ss_pred cCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCC-cEEEEEECCCCCEEe
Confidence 369999999999987776642100 0001122222 3673 43333234 699999999988753
No 154
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.29 E-value=4.7e-05 Score=69.24 Aligned_cols=162 Identities=12% Similarity=0.056 Sum_probs=102.6
Q ss_pred CCCCCceEEEEecCCEE-EEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCC
Q 023864 102 DPRAFTQGLLYAENDTL-FESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 102 d~~aFTQGL~~~~dg~L-yeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tl 180 (276)
+...++..+.|+|||++ ...+|. .+..|+.||+++++.+....-..... .+++..+--+.++--++.+.+++..+.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~-~d~~i~iwd~~~~~~~~~~~~~~~V~--~v~fspdg~~l~s~s~~~~~~~~~~~~ 207 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSK-VPAIMRIIDPSDLTEKFEIETRGEVK--DLHFSTDGKVVAYITGSSLEVISTVTG 207 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESC-SSCEEEEEETTTTEEEEEEECSSCCC--EEEECTTSSEEEEECSSCEEEEETTTC
T ss_pred CcccCEEEEEEcCCCCEEEEEECC-CCCEEEEeECCCCcEEEEeCCCCceE--EEEEccCCceEEeccceeEEEEEeccC
Confidence 45678889999999974 444452 56789999999999888876555544 455543322233334777888888888
Q ss_pred cEEEEEecC-CC---CeeEEeeCCCEEEEE--CCCc--eEEEEcCCCCcEE--EEEEeeeCCEeeeeeeeeEEE-CCEEE
Q 023864 181 NKLEEFTHQ-MK---DGWGLATDGKVLFGS--DGSS--MLYQIDPQTLKVI--RKDIVRYKGREVRNLNELEFI-KGEVW 249 (276)
Q Consensus 181 k~i~~~~~~-~~---EGWGLT~Dg~~L~vS--DGS~--~L~viDp~t~~vi--~~I~V~~~g~pv~~lNELE~i-dG~ly 249 (276)
+.+.+.... .. ....+.+||+.|+.. |+.. .+..+|..+.+.. ..........+ ++-|.+. ||++.
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---V~~~~~Spdg~~l 284 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKG---ITSMDVDMKGELA 284 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSC---EEEEEECTTSCEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCC---eEeEEECCCCCce
Confidence 776654332 11 123467899988773 3433 5667776655432 22222222222 3344454 67777
Q ss_pred EEeCCCCCeEEEEeCCCCcEE
Q 023864 250 ANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 250 ANvw~s~d~I~vIDp~T~~v~ 270 (276)
|.--.+ ..|.+.|.++++.+
T Consensus 285 asgs~D-~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 285 VLASND-NSIALVKLKDLSMS 304 (365)
T ss_dssp EEEETT-SCEEEEETTTTEEE
T ss_pred EEEcCC-CEEEEEECCCCcEE
Confidence 766566 89999999997654
No 155
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.27 E-value=0.00011 Score=67.24 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=105.1
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~ 173 (276)
+.+.++.. .......+.|++++.++.+++ .+..|+.||+++++.+....-.... -..+.+.++.| +..-.++.+.
T Consensus 301 ~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~l-~s~s~dg~v~ 375 (464)
T 3v7d_B 301 KCLYILSG-HTDRIYSTIYDHERKRCISAS--MDTTIRIWDLENGELMYTLQGHTAL-VGLLRLSDKFL-VSAAADGSIR 375 (464)
T ss_dssp EEEEEECC-CSSCEEEEEEETTTTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSC-EEEEEECSSEE-EEEETTSEEE
T ss_pred cEEEEecC-CCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCcEEEEEeCCCCc-EEEEEEcCCEE-EEEeCCCcEE
Confidence 45666652 345567999999987666666 6778999999999988776543332 34566665544 4445688999
Q ss_pred EEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEe
Q 023864 174 IYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANV 252 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANv 252 (276)
+||..+.+....+... ......+.+||+.|..+. .+.|.++|.++++.+++..... . ..++.+.+.++.+.+..
T Consensus 376 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~-~---~~v~~v~~~~~~l~~~~ 450 (464)
T 3v7d_B 376 GWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKD-A---DQIWSVNFKGKTLVAAV 450 (464)
T ss_dssp EEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTT-C---SEEEEEEEETTEEEEEE
T ss_pred EEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccC-C---CcEEEEEecCCEEEEEE
Confidence 9999999888777654 223446788999888755 6799999999999876543332 2 24556668777777666
No 156
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.27 E-value=7.9e-05 Score=66.67 Aligned_cols=172 Identities=11% Similarity=0.083 Sum_probs=109.2
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec--CCCceEEEEEEeC-CEEEEEEee
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM--EGSYFGEGLTLLG-EKLFQVTWL 168 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l--~~~~FgEGit~~g-~~LyqlTwk 168 (276)
+++++++++..+......|.|+|||+++.++| .+..|+.||+++++......+ +..---..+++.. +++....-.
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 56788888743443557999999999888777 788999999999876544332 2222334566653 445555567
Q ss_pred CCEEEEEeCCCC--cEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE
Q 023864 169 QKTGFIYDQNNL--NKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 169 ~~~v~V~D~~tl--k~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i 244 (276)
++.+.++|.++. +.+.++.-... ....+++||+.|+....+..|.++|..+.+....+.+-. ++. ..++.+.+.
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~-~~v~~~~~~ 159 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHT-QDVKHVVWH 159 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCC-SCEEEEEEC
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcC-CCeEEEEEC
Confidence 889999997765 44555542111 233466899998887777889999987765444333321 111 124445554
Q ss_pred -CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 245 -KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
+|.+.|..-.+ ..|.+.|.++++
T Consensus 160 p~~~~l~s~s~d-~~i~~w~~~~~~ 183 (345)
T 3fm0_A 160 PSQELLASASYD-DTVKLYREEEDD 183 (345)
T ss_dssp SSSSCEEEEETT-SCEEEEEEETTE
T ss_pred CCCCEEEEEeCC-CcEEEEEecCCC
Confidence 45555544445 677777777654
No 157
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.27 E-value=0.00018 Score=61.08 Aligned_cols=153 Identities=7% Similarity=-0.038 Sum_probs=106.1
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk 181 (276)
......+.+.+ ++.++.+++ .+..|+.|| .++............-..+++.. ++ +...-.++.+.+||..+.+
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~--~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTAS--ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEE--TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC
T ss_pred CCceeEEEEccCCCCEEEEEE--CCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh
Confidence 34446788876 666655555 677899999 55555555543333445666654 45 6777789999999999999
Q ss_pred EEEEEecCCCC--eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCe
Q 023864 182 KLEEFTHQMKD--GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPC 258 (276)
Q Consensus 182 ~i~~~~~~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~ 258 (276)
.+.++...... ...+++|| .|+.......|.++|.++.+.+..+.... . .++.+.+. +|++.+ ...+ +.
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--~---~i~~~~~~~~~~~~~-~~~d-g~ 288 (313)
T 3odt_A 217 VLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPA--I---SIWSVDCMSNGDIIV-GSSD-NL 288 (313)
T ss_dssp EEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSS--S---CEEEEEECTTSCEEE-EETT-SC
T ss_pred hhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccC--c---eEEEEEEccCCCEEE-EeCC-Cc
Confidence 99998743122 23356788 46666678899999999999888876543 1 34455665 566554 4456 89
Q ss_pred EEEEeCCCCcE
Q 023864 259 IPYAYLQAFGS 269 (276)
Q Consensus 259 I~vIDp~T~~v 269 (276)
|.+.|.++++.
T Consensus 289 i~iw~~~~~~~ 299 (313)
T 3odt_A 289 VRIFSQEKSRW 299 (313)
T ss_dssp EEEEESCGGGC
T ss_pred EEEEeCCCCce
Confidence 99999998653
No 158
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.27 E-value=0.00011 Score=68.82 Aligned_cols=162 Identities=9% Similarity=-0.046 Sum_probs=110.1
Q ss_pred CCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC--ceEEEEEEeC--CEEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGS--YFGEGLTLLG--EKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~--~FgEGit~~g--~~LyqlTwk~~~v~V~D~~ 178 (276)
......+.|++++. ++.+++ .+..|+.||+++++.+....-... ..-..+++.. ++++...-.++.+.+||..
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVG--DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEE--TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred CccEEEEEECCCCCcEEEEEe--CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 45567999999985 666666 678999999999998877653322 0234566653 3555555568999999999
Q ss_pred CCcEEEEEec---C-CCCeeEEee-CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeC
Q 023864 179 NLNKLEEFTH---Q-MKDGWGLAT-DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW 253 (276)
Q Consensus 179 tlk~i~~~~~---~-~~EGWGLT~-Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw 253 (276)
+.+.+.++.. . ...=..++. |++.|+.......|.++|..+.+.+.++........ ..+.-+.+.++...+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG-NQQVGVVATGNGRIISLS 316 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGG-GCEEEEEEEETTEEEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc-CceeEEEeCCCCeEEEEE
Confidence 9999999821 2 123334433 888888877788999999999999888776521111 122233444554444444
Q ss_pred CCCCeEEEEeCCCCcE
Q 023864 254 QVWPCIPYAYLQAFGS 269 (276)
Q Consensus 254 ~s~d~I~vIDp~T~~v 269 (276)
.. ..|.+.|..+++.
T Consensus 317 ~~-g~i~~~d~~~~~~ 331 (615)
T 1pgu_A 317 LD-GTLNFYELGHDEV 331 (615)
T ss_dssp TT-SCEEEEETTEEEE
T ss_pred CC-CCEEEEECCCCcE
Confidence 56 8899999988443
No 159
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.27 E-value=0.00018 Score=62.11 Aligned_cols=154 Identities=9% Similarity=-0.055 Sum_probs=103.0
Q ss_pred CCCceEEEEecC---CEEEEEcCCCCCCeEEEEeCCC-CcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAEN---DTLFESTGLYGRSSVRRVALET-GKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~d---g~LyeStG~yg~S~I~~iDl~t-gkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~ 178 (276)
..-+..+.|+++ |.++.+++ .+..|+.||+++ ++......-+..---..+++.. ++.....-.++.+.+||..
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCceEEEEEcCCCCCceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 555689999998 57777666 677899999998 6554232222121234556653 4444455678999999999
Q ss_pred CCcEEEEEecCCCCeeEE----eeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCC
Q 023864 179 NLNKLEEFTHQMKDGWGL----ATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQ 254 (276)
Q Consensus 179 tlk~i~~~~~~~~EGWGL----T~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~ 254 (276)
+.+.+...... ..-+.+ .+|++.|+.+..+..|.++|..+.+.+..+.... ...-+.+....+++.. .
T Consensus 117 ~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~ 188 (368)
T 3mmy_A 117 SNQAIQIAQHD-APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE------RCYCADVIYPMAVVAT-A 188 (368)
T ss_dssp TTEEEEEEECS-SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS------CEEEEEEETTEEEEEE-G
T ss_pred CCCceeecccc-CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC------CceEEEecCCeeEEEe-C
Confidence 99988877654 333444 5677778887778899999999998887777653 2223345555555444 3
Q ss_pred CCCeEEEEeCCCCc
Q 023864 255 VWPCIPYAYLQAFG 268 (276)
Q Consensus 255 s~d~I~vIDp~T~~ 268 (276)
. +.|.+.|..+..
T Consensus 189 ~-~~i~~~~~~~~~ 201 (368)
T 3mmy_A 189 E-RGLIVYQLENQP 201 (368)
T ss_dssp G-GCEEEEECSSSC
T ss_pred C-CcEEEEEecccc
Confidence 4 667777776644
No 160
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.27 E-value=0.00013 Score=63.60 Aligned_cols=168 Identities=11% Similarity=-0.025 Sum_probs=108.6
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeC-CEEEEEEeeCCE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g-~~LyqlTwk~~~ 171 (276)
+.+.+++. ...-...+.|++++.++.+++ .+..|+.||+++++......+.. .--...+++.. ++.+...-.++.
T Consensus 43 ~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 119 (372)
T 1k8k_C 43 VQVHELKE-HNGQVTGVDWAPDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 119 (372)
T ss_dssp EEEEEEEC-CSSCEEEEEEETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS
T ss_pred EeeeeecC-CCCcccEEEEeCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCE
Confidence 36677753 244567999999988776666 66789999999998766654332 22234556642 444455557889
Q ss_pred EEEEeCCCCcE---EEEEecCC---CCeeEEeeCCCEEEEECCCceEEEEcCC------------------CCcEEEEEE
Q 023864 172 GFIYDQNNLNK---LEEFTHQM---KDGWGLATDGKVLFGSDGSSMLYQIDPQ------------------TLKVIRKDI 227 (276)
Q Consensus 172 v~V~D~~tlk~---i~~~~~~~---~EGWGLT~Dg~~L~vSDGS~~L~viDp~------------------t~~vi~~I~ 227 (276)
+.+||.++.+. ...+..+. -....+++|++.|+....+..|.++|.. +.+.+..+.
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 199 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC
T ss_pred EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC
Confidence 99999887763 44443221 1233466789999887778899999953 556655544
Q ss_pred eeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 228 VRYKGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 228 V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.. . ..++.+.+. +|..++..-.+ ..|.+.|.++++.+
T Consensus 200 ~~--~---~~v~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 200 SS--C---GWVHGVCFSANGSRVAWVSHD-STVCLADADKKMAV 237 (372)
T ss_dssp CC--S---SCEEEEEECSSSSEEEEEETT-TEEEEEEGGGTTEE
T ss_pred CC--C---CeEEEEEECCCCCEEEEEeCC-CEEEEEECCCCcee
Confidence 21 1 134455564 55444444466 88999999987654
No 161
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.26 E-value=7.6e-05 Score=68.68 Aligned_cols=166 Identities=7% Similarity=-0.031 Sum_probs=111.3
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~ 173 (276)
.+.++.. .......+.|+++|.++.+++ .+..|+.||+.+++.+....-... .-..+++.. +...+..-.++++.
T Consensus 142 ~~~~l~~-h~~~V~~v~~~~~~~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~-~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 142 FERTLKG-HTDSVQDISFDHSGKLLASCS--ADMTIKLWDFQGFECIRTMHGHDH-NVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CCEEECC-CSSCEEEEEECTTSSEEEEEE--TTSCCCEEETTSSCEEECCCCCSS-CEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEEEec-cCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeEEEcCCCC-CEEEEEEeCCCCEEEEEeCCCeEE
Confidence 3455542 355678999999998888777 778999999999988766532222 234566643 34445555789999
Q ss_pred EEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-------
Q 023864 174 IYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI------- 244 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i------- 244 (276)
+||..+.+.+.++.-... ....+.+||+.|+....+..|.++|..+.+.+..+.-.. .+ ++-+.+.
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~--~~---v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR--HV---VECISWAPESSYSS 292 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SC---EEEEEECCSCGGGG
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCC--ce---EEEEEEcCcccccc
Confidence 999999999998863311 122356788888887778899999999988776553221 11 2222232
Q ss_pred --------------CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 245 --------------KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 245 --------------dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+|.+.+..-.+ ..|.+.|..+++.+
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D-~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRD-KTIKMWDVSTGMCL 331 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETT-SEEEEEETTTTEEE
T ss_pred hhhhccccccccCCCCCEEEEEeCC-CeEEEEECCCCceE
Confidence 14455555456 78999999986544
No 162
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.26 E-value=3.1e-05 Score=68.91 Aligned_cols=156 Identities=13% Similarity=0.077 Sum_probs=111.1
Q ss_pred CCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-----CceEEEEEEeC--CEEEEEEeeCC---EEE
Q 023864 105 AFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEG-----SYFGEGLTLLG--EKLFQVTWLQK---TGF 173 (276)
Q Consensus 105 aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-----~~FgEGit~~g--~~LyqlTwk~~---~v~ 173 (276)
.....+.|+++ +.++.+++ .+..|+.||+++++.+....... ...-..+++.. ..++...-.++ .+.
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAG--SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CCCCEEEECSSCTTEEEEES--SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred CCeeEEEeCCCCCcEEEEEc--CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 34569999998 56777666 67789999999999888877652 23345666664 35666666666 999
Q ss_pred EEeCCCC-cEEEEEe-cCCCCeeE--Eee-CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-
Q 023864 174 IYDQNNL-NKLEEFT-HQMKDGWG--LAT-DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG- 246 (276)
Q Consensus 174 V~D~~tl-k~i~~~~-~~~~EGWG--LT~-Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG- 246 (276)
+||..+. +.+..+. -....-.. +++ |++.|+....+..|.++|.++.+.+.++.... ..++.+.+. +|
T Consensus 244 ~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-----~~v~~~~~s~~~~ 318 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG-----NWCFKTKFAPEAP 318 (416)
T ss_dssp EEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS-----SCCCCEEECTTCT
T ss_pred EEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC-----CceEEEEECCCCC
Confidence 9999986 5556665 11122233 456 78888887778899999999999888776432 234556676 45
Q ss_pred EEEEEeCCCCCeEEEEeCCCCc
Q 023864 247 EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 247 ~lyANvw~s~d~I~vIDp~T~~ 268 (276)
.++|..-.+ ..|.+.|.++++
T Consensus 319 ~~l~s~~~d-~~i~iw~~~~~~ 339 (416)
T 2pm9_A 319 DLFACASFD-NKIEVQTLQNLT 339 (416)
T ss_dssp TEEEECCSS-SEEEEEESCCCC
T ss_pred CEEEEEecC-CcEEEEEccCCC
Confidence 577777667 899999988765
No 163
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.26 E-value=1e-05 Score=71.99 Aligned_cols=170 Identities=9% Similarity=-0.034 Sum_probs=107.2
Q ss_pred eEEEEEEecCCCCCceEEEEec--CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeC
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQ 169 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~--dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~ 169 (276)
.+++..+.+....-...+.+++ ++.++.+++ .+..|+.||+++++............-..+++.. +.++..--.+
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 3456666554455678999999 888888777 7789999999999986554333221223566654 4555555789
Q ss_pred CEEEEEeCCCCcEE-EEEecC-CC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeee-CCEeeeeeeeeEEE
Q 023864 170 KTGFIYDQNNLNKL-EEFTHQ-MK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFI 244 (276)
Q Consensus 170 ~~v~V~D~~tlk~i-~~~~~~-~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~-~g~pv~~lNELE~i 244 (276)
+.+.+||..+.+.+ .++... .. ....+++||+.|..+. ++.|.++|..+.+.+.++..-. ...++.. .-+.+.
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 269 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT-VTYDID 269 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CC-EEEEEC
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccc-eEEEEC
Confidence 99999999999987 777651 11 2334678999988855 3499999999987665443311 1111111 124454
Q ss_pred -CCEEEEEeCC-CCCeEEEEeCCCC
Q 023864 245 -KGEVWANVWQ-VWPCIPYAYLQAF 267 (276)
Q Consensus 245 -dG~lyANvw~-s~d~I~vIDp~T~ 267 (276)
+|...|..-. + +.|.+.|.+++
T Consensus 270 ~~g~~l~~~s~~d-~~i~v~~~~~~ 293 (343)
T 3lrv_A 270 DSGKNMIAYSNES-NSLTIYKFDKK 293 (343)
T ss_dssp TTSSEEEEEETTT-TEEEEEEECTT
T ss_pred CCCCEEEEecCCC-CcEEEEEEccc
Confidence 4544444333 5 77777776543
No 164
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.24 E-value=2.1e-05 Score=72.65 Aligned_cols=156 Identities=8% Similarity=0.011 Sum_probs=106.2
Q ss_pred CCceEEEEecCCEE-EEEcCCCCCCeEEEEeCC--CCcEEEEe---ecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEe
Q 023864 105 AFTQGLLYAENDTL-FESTGLYGRSSVRRVALE--TGKVEAIN---QMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 105 aFTQGL~~~~dg~L-yeStG~yg~S~I~~iDl~--tgkv~~~~---~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D 176 (276)
.....+.|++||++ +.+++ .+..|+.||+. +++.+... ..+..+ ..+++. +..|+... .++.++++|
T Consensus 103 ~~v~~~~~s~d~~~l~~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v--~~~~~sp~~~~l~~~~-~~g~v~~~~ 177 (450)
T 2vdu_B 103 SYIRNLRLTSDESRLIACAD--SDKSLLVFDVDKTSKNVLKLRKRFCFSKRP--NAISIAEDDTTVIIAD-KFGDVYSID 177 (450)
T ss_dssp CCEEEEEECTTSSEEEEEEG--GGTEEEEEEECSSSSSCEEEEEEEECSSCE--EEEEECTTSSEEEEEE-TTSEEEEEE
T ss_pred CceEEEEEcCCCCEEEEEEC--CCCeEEEEECcCCCCceeeeeecccCCCCc--eEEEEcCCCCEEEEEe-CCCcEEEEe
Confidence 35689999999875 56665 57889999999 88766654 334443 356664 44555554 589999999
Q ss_pred CCCCcEEE----EEec-C-CCCeeEEeeC---CCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCE
Q 023864 177 QNNLNKLE----EFTH-Q-MKDGWGLATD---GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGE 247 (276)
Q Consensus 177 ~~tlk~i~----~~~~-~-~~EGWGLT~D---g~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~ 247 (276)
..+.+... .+.- . .-....+++| ++.|+.++....|.++|..+.+.+..+..+- . ..++-+.+.||.
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h-~---~~v~~~~~sd~~ 253 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH-K---HFVSSICCGKDY 253 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC-S---SCEEEEEECSTT
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC-C---CceEEEEECCCC
Confidence 88777543 3321 1 1133457788 8888887778899999999988776543221 1 234455666666
Q ss_pred EEEEeCCCCCeEEEEeCCCCcEE
Q 023864 248 VWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 248 lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.++..-.+ ..|.+.|.++++.+
T Consensus 254 ~l~s~~~d-~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 254 LLLSAGGD-DKIFAWDWKTGKNL 275 (450)
T ss_dssp EEEEEESS-SEEEEEETTTCCEE
T ss_pred EEEEEeCC-CeEEEEECCCCcEe
Confidence 55555566 89999999997753
No 165
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.24 E-value=0.00053 Score=62.60 Aligned_cols=166 Identities=11% Similarity=0.030 Sum_probs=112.4
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe---CCEEEEEEeeCC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL---GEKLFQVTWLQK 170 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~---g~~LyqlTwk~~ 170 (276)
+.+.++.. ...-+..+.|++++ ++.+++ .+..|+.||+++++.+....-... --..+++. ++.+.+..-.++
T Consensus 153 ~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s--~dg~i~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~~l~s~s~d~ 227 (464)
T 3v7d_B 153 KFLLQLSG-HDGGVWALKYAHGG-ILVSGS--TDRTVRVWDIKKGCCTHVFEGHNS-TVRCLDIVEYKNIKYIVTGSRDN 227 (464)
T ss_dssp EEEEEECC-CSSCEEEEEECSTT-EEEEEE--TTSCEEEEETTTTEEEEEECCCSS-CEEEEEEEESSSCEEEEEEETTS
T ss_pred cEEEEEeC-CCcCEEEEEEcCCC-EEEEEe--CCCCEEEEECCCCcEEEEECCCCC-ccEEEEEecCCCCCEEEEEcCCC
Confidence 46666662 34555799999878 444555 678899999999998776652222 12344444 457777777899
Q ss_pred EEEEEeCCCCcEEE-----------------------EEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEE
Q 023864 171 TGFIYDQNNLNKLE-----------------------EFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDI 227 (276)
Q Consensus 171 ~v~V~D~~tlk~i~-----------------------~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~ 227 (276)
.+.++|..+.+.+. .+.-....-..+.++++.|+....+..|.++|..+++.+..+.
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 99999998876432 2221112334578899999998888899999999998877664
Q ss_pred eeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 228 VRYKGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 228 V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
-.. ..+..+.+. +|...+..-.+ ..|.+.|.++++.+
T Consensus 308 ~~~-----~~v~~~~~~~~~~~l~sg~~d-g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 308 GHT-----DRIYSTIYDHERKRCISASMD-TTIRIWDLENGELM 345 (464)
T ss_dssp CCS-----SCEEEEEEETTTTEEEEEETT-SCEEEEETTTTEEE
T ss_pred CCC-----CCEEEEEEcCCCCEEEEEeCC-CcEEEEECCCCcEE
Confidence 322 234455666 45444445456 88999999996543
No 166
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.00011 Score=66.67 Aligned_cols=167 Identities=8% Similarity=0.014 Sum_probs=113.0
Q ss_pred EEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCC---CCcEEEEe--------ecC---CCceEEEEEEe---
Q 023864 96 VNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALE---TGKVEAIN--------QME---GSYFGEGLTLL--- 158 (276)
Q Consensus 96 v~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~---tgkv~~~~--------~l~---~~~FgEGit~~--- 158 (276)
..++.| ......+.|++++.++.+++ .+..|+.||++ +++..... .+. ...+...+...
T Consensus 105 ~~~~~h--~~~v~~~~~~~~~~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 105 SLTYDC--SSTVTQITMIPNFDAFAVSS--KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp SEEEEC--SSCEEEEEECTTSSEEEEEE--TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred eeeccC--CCCEEEEEEeCCCCEEEEEe--CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 344556 34457999999888777766 67899999995 66554432 211 22233333322
Q ss_pred CCEEEEEEeeCCEEEEEeCCCCcEEEEEecC--CCC--eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEe
Q 023864 159 GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKD--GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGRE 234 (276)
Q Consensus 159 g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~--~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~p 234 (276)
++.+....-.++.+.+||..+.+.+.++..+ ... ...+.+||+.|+.......|.++|..+.+.++++.... ..+
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~ 259 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD-HAP 259 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT-CEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC-CCc
Confidence 3566666667899999999999999998742 122 23356799999988888899999999998888776532 223
Q ss_pred eeeeeeeEEE-----CCEEEEEeCCCCCeEEEEeCCCCcEEE
Q 023864 235 VRNLNELEFI-----KGEVWANVWQVWPCIPYAYLQAFGSSL 271 (276)
Q Consensus 235 v~~lNELE~i-----dG~lyANvw~s~d~I~vIDp~T~~v~l 271 (276)
++.+.+. +|.+.|..-.+ ..|.+.|.++++..-
T Consensus 260 ---v~~~~~~~~~s~~~~~l~s~~~d-g~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 260 ---ITHVEVCQFYGKNSVIVVGGSSK-TFLTIWNFVKGHCQY 297 (437)
T ss_dssp ---EEEEEECTTTCTTEEEEEEESTT-EEEEEEETTTTEEEE
T ss_pred ---eEEEEeccccCCCccEEEEEcCC-CcEEEEEcCCCcEEE
Confidence 3344333 45566666555 789999999976543
No 167
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.23 E-value=0.00014 Score=63.43 Aligned_cols=154 Identities=12% Similarity=-0.007 Sum_probs=107.2
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc---EEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeC--
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK---VEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQ-- 177 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk---v~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~-- 177 (276)
......+.|++++.++.+++ .+..|+.||+++++ +......+....-..+++.. ++++...-.++.+.+||.
T Consensus 96 ~~~v~~~~~~~~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 173 (372)
T 1k8k_C 96 NRAARCVRWAPNEKKFAVGS--GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYI 173 (372)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCC
T ss_pred CCceeEEEECCCCCEEEEEe--CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccc
Confidence 44567999999987666665 67889999999876 23333333233345667653 455566667899999994
Q ss_pred ----------------CCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeee
Q 023864 178 ----------------NNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLN 239 (276)
Q Consensus 178 ----------------~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lN 239 (276)
.+.+.+.++.-... ....+.+||+.|+....+..|.++|..+.+.+.++.... . .++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~---~v~ 248 (372)
T 1k8k_C 174 KEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET--L---PLL 248 (372)
T ss_dssp TTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS--C---CEE
T ss_pred ccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC--C---CeE
Confidence 46677777752211 233466799999988888899999999999888876542 2 345
Q ss_pred eeEEE-CCEEEEEeCCCCCeEEEEeCCC
Q 023864 240 ELEFI-KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 240 ELE~i-dG~lyANvw~s~d~I~vIDp~T 266 (276)
.+.+. +|.+.+.- .. +.|.+.|..+
T Consensus 249 ~~~~~~~~~~l~~~-~d-~~i~i~~~~~ 274 (372)
T 1k8k_C 249 AVTFITESSLVAAG-HD-CFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTEEEEEE-TT-SSCEEEEEET
T ss_pred EEEEecCCCEEEEE-eC-CeEEEEEccC
Confidence 56676 67766655 56 8888888877
No 168
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.22 E-value=0.00012 Score=65.88 Aligned_cols=161 Identities=9% Similarity=0.074 Sum_probs=108.9
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
......+.|++++..+.+++ ++..|+.||+++++.+....-.. ......+... ++.+++..-.++++.+||..+.+
T Consensus 154 ~~~v~~~~~~~~~~~l~t~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 154 TNYLSACSFTNSDMQILTAS--GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred CCcEEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 45567999999886555666 67899999999999877765332 2333333333 23566666678999999999999
Q ss_pred EEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCe
Q 023864 182 KLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPC 258 (276)
Q Consensus 182 ~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~ 258 (276)
.+.++..... ....+.+||+.|+....+..|.++|..+.+.+....-. ......+.+.+. +|.+.+.-..+ ..
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~---~~~~~~~~~~~s~~g~~l~~g~~d-~~ 307 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE---SIIFGASSVDFSLSGRLLFAGYND-YT 307 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT---TCCSCEEEEEECTTSSEEEEEETT-SC
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC---CcccceeEEEEeCCCCEEEEEECC-Cc
Confidence 9988863211 23346678988888767889999999988665433211 111123444554 56665555566 88
Q ss_pred EEEEeCCCCcEE
Q 023864 259 IPYAYLQAFGSS 270 (276)
Q Consensus 259 I~vIDp~T~~v~ 270 (276)
|.+-|..+++.+
T Consensus 308 i~vwd~~~~~~~ 319 (354)
T 2pbi_B 308 INVWDVLKGSRV 319 (354)
T ss_dssp EEEEETTTCSEE
T ss_pred EEEEECCCCceE
Confidence 999999887644
No 169
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.22 E-value=3.1e-05 Score=67.12 Aligned_cols=158 Identities=8% Similarity=-0.009 Sum_probs=106.8
Q ss_pred CCceEEEEecC----CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCC
Q 023864 105 AFTQGLLYAEN----DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 105 aFTQGL~~~~d----g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~ 178 (276)
.-...+.|+++ |.++.+++ .+..|+.||+++++.+....-... --..+++. ++.+++..-.++.+.+||..
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAG--SRGIIRIINPITMQCIKHYVGHGN-AINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEE--TTCEEEEECTTTCCEEEEEESCCS-CEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CcEEEEEeccCCCCCCCEEEEec--CCCEEEEEEchhceEeeeecCCCC-cEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 44579999998 67777666 677999999999998877653222 23456664 45666666678999999999
Q ss_pred CCcEEEEEe---cCCCCeeE--EeeCCCEEEEECCCceEEEEcCCCCcEEEEEEee------------------------
Q 023864 179 NLNKLEEFT---HQMKDGWG--LATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR------------------------ 229 (276)
Q Consensus 179 tlk~i~~~~---~~~~EGWG--LT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~------------------------ 229 (276)
+.+.+..+. .....-.. +.+||+.|+....+..|.++|..+.+.+..+.-.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 999998883 11123333 4578999988777889999999987654322210
Q ss_pred eCCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 230 YKGREVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 230 ~~g~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
..+ .-..++-+.+. |.+.+..-.+ +.|.+.|..+++
T Consensus 227 ~~~-~~~~v~~~~~~-~~~l~~~~~d-~~i~~wd~~~~~ 262 (366)
T 3k26_A 227 RDI-HRNYVDCVRWL-GDLILSKSCE-NAIVCWKPGKME 262 (366)
T ss_dssp CSS-CSSCCCEEEEE-TTEEEEECSS-SEEEEEEESSTT
T ss_pred ccC-CcceEEEEEEc-CCEEEEEecC-CEEEEEeCCCcc
Confidence 000 11234555666 4444445456 899999988764
No 170
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.21 E-value=0.00022 Score=69.76 Aligned_cols=168 Identities=10% Similarity=-0.021 Sum_probs=114.9
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--CEEEEEEeeCCE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~~LyqlTwk~~~ 171 (276)
+.+.++.. .......+.|++++..+.+++ .+..|+.||++++........+..-.-..+++.. +.++...-.++.
T Consensus 88 ~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 88 EKVVDFEA-HPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp CEEEEEEC-CSSCEEEEEECSSSSEEEEEE--TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred cEEEEEec-CCCCEEEEEEeCCCCEEEEEc--CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCe
Confidence 45556652 244567999999987665555 6779999999988433333223222345667764 567777778999
Q ss_pred EEEEeCCCCcEEEEEecCC-CC--eeEEee--CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-C
Q 023864 172 GFIYDQNNLNKLEEFTHQM-KD--GWGLAT--DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~~-~E--GWGLT~--Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-d 245 (276)
+.+||..+.+....+.... .. ...+++ ||..|++......|.++|..+.+.+.++.... . .++-+.+. +
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--~---~v~~~~~~~~ 239 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM--S---NVSFAVFHPT 239 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS--S---CEEEEEECSS
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC--C---CEEEEEEcCC
Confidence 9999999888877776431 22 223455 88999998888899999999998877765432 2 33444555 5
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
|.+.+....+ ..|.+.|+.+++..
T Consensus 240 ~~~l~~~~~d-g~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 240 LPIIISGSED-GTLKIWNSSTYKVE 263 (814)
T ss_dssp SSEEEEEETT-SCEEEEETTTCSEE
T ss_pred CCEEEEEeCC-CeEEEEECCCCcEE
Confidence 5555555566 88999999986643
No 171
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.20 E-value=0.00043 Score=61.58 Aligned_cols=163 Identities=10% Similarity=0.022 Sum_probs=110.7
Q ss_pred eEEEEEEecCCCCCceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEeec-CCCceEEEEEEeC--CEEEEEEee
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLG--EKLFQVTWL 168 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~l-~~~~FgEGit~~g--~~LyqlTwk 168 (276)
++++.++.. ...-...+.|++++ .++.+++ .+..|+.||+.+++......+ +..---..+++.. +.++...-.
T Consensus 63 ~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 63 YKLHRTASP-FDRRVTSLEWHPTHPTTVAVGS--KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp CEEEEEECC-CSSCEEEEEECSSCTTEEEEEE--BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET
T ss_pred cceEEeccC-CCCCEEEEEECCCCCCEEEEEc--CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC
Confidence 345555532 23445799999998 6776666 577899999999988777664 2222344667764 366666677
Q ss_pred CCEEEEEeCCCCcEEEEEecCC-----CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEE
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQM-----KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~-----~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~ 243 (276)
++.+.++|..+ +.+..+.... -....+.+|++.|+.......|.++|. +.+.+.++.-.. ..++.+.+
T Consensus 140 d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-----~~v~~~~~ 212 (383)
T 3ei3_B 140 RGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-----AKVTHAEF 212 (383)
T ss_dssp TTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS-----SCEEEEEE
T ss_pred CCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC-----CcEEEEEE
Confidence 89999999987 5555654321 123446789999999888899999998 466655554322 23455666
Q ss_pred E-CCE-EEEEeCCCCCeEEEEeCCC
Q 023864 244 I-KGE-VWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 244 i-dG~-lyANvw~s~d~I~vIDp~T 266 (276)
. +|. +++..-.+ ..|.+.|..+
T Consensus 213 ~~~~~~~l~s~~~d-~~i~iwd~~~ 236 (383)
T 3ei3_B 213 NPRCDWLMATSSVD-ATVKLWDLRN 236 (383)
T ss_dssp CSSCTTEEEEEETT-SEEEEEEGGG
T ss_pred CCCCCCEEEEEeCC-CEEEEEeCCC
Confidence 6 344 66666566 7899999887
No 172
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.20 E-value=5.9e-05 Score=75.73 Aligned_cols=120 Identities=13% Similarity=0.118 Sum_probs=93.4
Q ss_pred CCCeEEEEeCCCCcEEEEeecCCCceEEE----------------------------------EEEe--CCEEEEEEee-
Q 023864 126 GRSSVRRVALETGKVEAINQMEGSYFGEG----------------------------------LTLL--GEKLFQVTWL- 168 (276)
Q Consensus 126 g~S~I~~iDl~tgkv~~~~~l~~~~FgEG----------------------------------it~~--g~~LyqlTwk- 168 (276)
.+..|+.+|.+||+++...++++..+..+ ++++ ++.+|+-+..
T Consensus 335 ~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~ 414 (677)
T 1kb0_A 335 KNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNV 414 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEEC
T ss_pred CCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhc
Confidence 56789999999999998887765444333 3554 4788886542
Q ss_pred -----------------------------------------CCEEEEEeCCCCcEEEEEecCCCCeeE--EeeCCCEEEE
Q 023864 169 -----------------------------------------QKTGFIYDQNNLNKLEEFTHQMKDGWG--LATDGKVLFG 205 (276)
Q Consensus 169 -----------------------------------------~~~v~V~D~~tlk~i~~~~~~~~EGWG--LT~Dg~~L~v 205 (276)
.+.+..+|++|.|++-+++.+ ...|| ++.+|+.+|+
T Consensus 415 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~ 493 (677)
T 1kb0_A 415 PVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQ 493 (677)
T ss_dssp CCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEE
T ss_pred ceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEE
Confidence 177999999999999999876 23444 8889999999
Q ss_pred ECCCceEEEEcCCCCcEEEEEEeee--CCEeeeeeeeeEE-ECCEEEEEe
Q 023864 206 SDGSSMLYQIDPQTLKVIRKDIVRY--KGREVRNLNELEF-IKGEVWANV 252 (276)
Q Consensus 206 SDGS~~L~viDp~t~~vi~~I~V~~--~g~pv~~lNELE~-idG~lyANv 252 (276)
...+..|+++|.+|++++.++.+.. .+.|+. | .+|+.|+.+
T Consensus 494 g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~------y~~~G~~~v~~ 537 (677)
T 1kb0_A 494 GTADGRLVAYHAATGEKLWEAPTGTGVVAAPST------YMVDGRQYVSV 537 (677)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE------EEETTEEEEEE
T ss_pred ECCCCcEEEEECCCCceeeeeeCCCCcccCCEE------EEeCCEEEEEE
Confidence 8889999999999999999999875 234443 4 689988766
No 173
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.20 E-value=0.00063 Score=58.67 Aligned_cols=111 Identities=7% Similarity=0.010 Sum_probs=79.0
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEE--e-CCEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--L-GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~--~-g~~LyqlTwk~~~v~V~D~~tl 180 (276)
..-...+.|++|+.++.+++ .+..|+.||+++++......-.... ..+++ . +++++...-.++.+.+||..+.
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTAS--CDKTAKMWDLSSNQAIQIAQHDAPV--KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCE--EEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred cCCEEEEEECcCCCEEEEEc--CCCcEEEEEcCCCCceeeccccCce--EEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 44557999999987666666 6779999999999987765544443 35565 4 3566677778999999999999
Q ss_pred cEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCC
Q 023864 181 NKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQT 219 (276)
Q Consensus 181 k~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t 219 (276)
+.+.++..+ .....+...+..+++..+...+.++|..+
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 199 (368)
T 3mmy_A 162 NPMMVLQLP-ERCYCADVIYPMAVVATAERGLIVYQLEN 199 (368)
T ss_dssp SCSEEEECS-SCEEEEEEETTEEEEEEGGGCEEEEECSS
T ss_pred cEEEEEecC-CCceEEEecCCeeEEEeCCCcEEEEEecc
Confidence 999888765 34455555555666655555666666544
No 174
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.19 E-value=5.5e-05 Score=65.63 Aligned_cols=148 Identities=7% Similarity=-0.002 Sum_probs=98.7
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCcEE
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNKL 183 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk~i 183 (276)
.....+.++++|.||.++. ...|..+|.+ |+......++...+ ..+..+ ++.||+.+ +.++.+| .+.+.+
T Consensus 137 ~~~~~~~~~~~g~l~vgt~---~~~l~~~d~~-g~~~~~~~~~~~~~-~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~ 207 (330)
T 3hxj_A 137 AIYATPIVSEDGTIYVGSN---DNYLYAINPD-GTEKWRFKTNDAIT-SAASIGKDGTIYFGS---DKVYAIN-PDGTEK 207 (330)
T ss_dssp CCCSCCEECTTSCEEEECT---TSEEEEECTT-SCEEEEEECSSCCC-SCCEECTTCCEEEES---SSEEEEC-TTSCEE
T ss_pred ceeeeeEEcCCCEEEEEcC---CCEEEEECCC-CCEeEEEecCCCce-eeeEEcCCCEEEEEe---CEEEEEC-CCCcEE
Confidence 3445677777889998653 3689999999 98877777664332 234553 68999999 8899999 677777
Q ss_pred EEEecCCCCeeEEeeCCC-EEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEE
Q 023864 184 EEFTHQMKDGWGLATDGK-VLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPCIPY 261 (276)
Q Consensus 184 ~~~~~~~~EGWGLT~Dg~-~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~v 261 (276)
.++..+...-.++..|.+ .||++.....|+.+|+ +.+.+.+..... .. .+.+... +|.||+... . +.|.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~--~~---~~~~~~~~~g~l~v~t~-~-ggl~~ 279 (330)
T 3hxj_A 208 WNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGK--RI---ESSPVIGNTDTIYFGSY-D-GHLYA 279 (330)
T ss_dssp EEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSS--CC---CSCCEECTTSCEEEECT-T-CEEEE
T ss_pred EEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCC--Cc---cccceEcCCCeEEEecC-C-CCEEE
Confidence 776644223334554543 7888765678999996 455555544332 11 1223344 789998763 3 58999
Q ss_pred EeCCCCcEE
Q 023864 262 AYLQAFGSS 270 (276)
Q Consensus 262 IDp~T~~v~ 270 (276)
+|+ +++..
T Consensus 280 ~d~-~g~~~ 287 (330)
T 3hxj_A 280 INP-DGTEK 287 (330)
T ss_dssp ECT-TSCEE
T ss_pred ECC-CCcEE
Confidence 998 65654
No 175
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.18 E-value=0.00017 Score=66.20 Aligned_cols=152 Identities=14% Similarity=0.039 Sum_probs=103.6
Q ss_pred EEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEEEEEec
Q 023864 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTH 188 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~ 188 (276)
.+.+ |+.++.+++ .+..|+.||+++++......-.... -..++. ++.+.+..-.++.+.++|..+.+.+.++..
T Consensus 138 ~~~~--d~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 211 (435)
T 1p22_A 138 CLQY--DDQKIVSGL--RDNTIKIWDKNTLECKRILTGHTGS-VLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIH 211 (435)
T ss_dssp EEEC--CSSEEEEEE--SSSCEEEEESSSCCEEEEECCCSSC-EEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECC
T ss_pred EEEE--CCCEEEEEe--CCCeEEEEeCCCCeEEEEEcCCCCc-EEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcC
Confidence 4444 566665555 6789999999999987776533322 245555 445555566789999999999999999874
Q ss_pred CCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 189 QMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 189 ~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
....=..++.+++.|+....+..|.++|..+.+......+-. ++. ..++-+.+.+..|++.. .+ ..|.+.|.++++
T Consensus 212 h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~~l~s~~-~d-g~i~vwd~~~~~ 287 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV-GHR-AAVNVVDFDDKYIVSAS-GD-RTIKVWNTSTCE 287 (435)
T ss_dssp CCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEEC-CCS-SCEEEEEEETTEEEEEE-TT-SEEEEEETTTCC
T ss_pred CCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEec-CCC-CcEEEEEeCCCEEEEEe-CC-CeEEEEECCcCc
Confidence 433445677888888887778899999999887654333322 111 23445567555555544 56 889999999976
Q ss_pred EE
Q 023864 269 SS 270 (276)
Q Consensus 269 v~ 270 (276)
.+
T Consensus 288 ~~ 289 (435)
T 1p22_A 288 FV 289 (435)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 176
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.17 E-value=0.0011 Score=59.53 Aligned_cols=167 Identities=11% Similarity=0.049 Sum_probs=110.3
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC------------ceE---------
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS------------YFG--------- 152 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~------------~Fg--------- 152 (276)
+...++.. ...-+..+.|++|++++.+++ .+..|++||..+++.......+.. .++
T Consensus 55 ~~~~~l~g-H~~~V~~~~~s~d~~~l~s~s--~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~ 131 (354)
T 2pbi_B 55 KTRRTLKG-HGNKVLCMDWCKDKRRIVSSS--QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCS 131 (354)
T ss_dssp CEEEEEEC-CSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEE
T ss_pred EEEEEecC-CCCeEEEEEECCCCCEEEEEe--CCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEE
Confidence 44555542 244567999999998888877 788999999999887665543311 010
Q ss_pred --------------------------EEEEEeC-CEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCC--eeEEee--CCC
Q 023864 153 --------------------------EGLTLLG-EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD--GWGLAT--DGK 201 (276)
Q Consensus 153 --------------------------EGit~~g-~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~E--GWGLT~--Dg~ 201 (276)
..+.+.. +......-.++++.+||.++.+.+.++.-.... ...+++ +|+
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 1222222 222333345789999999999999998743122 233444 567
Q ss_pred EEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 202 VLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 202 ~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.|+....+..|.++|..+.+.+..+.... ..++-+.+. +|..+|..-.+ ..|.+.|..+++.
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~D-~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHE-----SDVNSVRYYPSGDAFASGSDD-ATCRLYDLRADRE 274 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCS-----SCEEEEEECTTSSEEEEEETT-SCEEEEETTTTEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCC-----CCeEEEEEeCCCCEEEEEeCC-CeEEEEECCCCcE
Confidence 78777677899999999998876654322 245556665 56666666566 8899999988654
No 177
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.17 E-value=3e-05 Score=75.41 Aligned_cols=152 Identities=10% Similarity=-0.038 Sum_probs=97.3
Q ss_pred ceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCC-----Cc
Q 023864 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNN-----LN 181 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~t-----lk 181 (276)
...+.|++|++++.+++ ..|..||++++++......+.....-.+..+|++|+.. .++.++++|.++ .+
T Consensus 84 v~~~~~spd~~~~~~~~----~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 84 SFRTLDAGRGLVVLFTQ----GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CEEEEETTTTEEEEEET----TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCC
T ss_pred ceeEEECCCCeEEEEEC----CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCC
Confidence 46899999977666543 79999999999876655444333322334445666653 689999999988 66
Q ss_pred EEEEEecCC----------------CCeeEEeeCCCEEEEEC---------------------------------CCceE
Q 023864 182 KLEEFTHQM----------------KDGWGLATDGKVLFGSD---------------------------------GSSML 212 (276)
Q Consensus 182 ~i~~~~~~~----------------~EGWGLT~Dg~~L~vSD---------------------------------GS~~L 212 (276)
.......+. ..+..++|||++|+.+. +..+|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 544322221 14566889999987753 45789
Q ss_pred EEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCE-EEEEeCCC---CCeEEEEeCCCC
Q 023864 213 YQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGE-VWANVWQV---WPCIPYAYLQAF 267 (276)
Q Consensus 213 ~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~-lyANvw~s---~d~I~vIDp~T~ 267 (276)
+++|.++.+... +.... ..-..+..+.|. ||+ |++..... ...|.++|++++
T Consensus 238 ~~~d~~~~~~~~-~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 238 GIYHLATGKTVY-LQTGE--PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp EEEETTTTEEEE-CCCCS--CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred EEEECCCCceEe-eccCC--CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 999999887542 22211 111234455665 564 66543221 028999999997
No 178
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.16 E-value=3.4e-05 Score=71.13 Aligned_cols=162 Identities=14% Similarity=0.090 Sum_probs=99.3
Q ss_pred CCCceEEEEecC----CEEEEEcCCCC---CCeEEEEeCCCCcEEEE---e-ecC----CCceEEEEEEe-CCEEEEEEe
Q 023864 104 RAFTQGLLYAEN----DTLFESTGLYG---RSSVRRVALETGKVEAI---N-QME----GSYFGEGLTLL-GEKLFQVTW 167 (276)
Q Consensus 104 ~aFTQGL~~~~d----g~LyeStG~yg---~S~I~~iDl~tgkv~~~---~-~l~----~~~FgEGit~~-g~~LyqlTw 167 (276)
.....||++++| +.||++.-..+ .+.|.+++++.+++... . .++ ..-++.+|++. ++.||+.+.
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 345689999997 78998643111 27899999886543211 1 133 23467789986 469999974
Q ss_pred e-------------CCEEEEEeCCCC------------cEEEEEecC--CCCeeEEeeCCCEEEEEC-CCce--------
Q 023864 168 L-------------QKTGFIYDQNNL------------NKLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSM-------- 211 (276)
Q Consensus 168 k-------------~~~v~V~D~~tl------------k~i~~~~~~--~~EGWGLT~Dg~~L~vSD-GS~~-------- 211 (276)
. .++++.+|++.- .....+.++ .+.|..+.+++..||++| |.+.
T Consensus 154 ~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~de 233 (352)
T 2ism_A 154 EVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDE 233 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCE
T ss_pred CCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeE
Confidence 2 378999998751 122234444 345666667677899999 7665
Q ss_pred EEEEcCCCCc----EEEEEEeeeC--CEee------eeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 212 LYQIDPQTLK----VIRKDIVRYK--GREV------RNLNELEFIKGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 212 L~viDp~t~~----vi~~I~V~~~--g~pv------~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
|..+.+...- .... .... ..|+ ..+.-|.+.+|.+|+..|.. +.|.+|+++..+
T Consensus 234 i~~i~~G~nyGwp~~~g~--~~~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~-~~v~~v~~~~~~ 299 (352)
T 2ism_A 234 VNLIVPGGNYGWPRVVGR--GNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRG-QALLRLVLEGER 299 (352)
T ss_dssp EEEECTTCBCCTTTCCSC--CCCTTSCCCSEECTTCCCEEEEEEETTEEEEEETTT-TEEEEEEEEEET
T ss_pred EEEeccCCcCCCCcccCC--CCCCCCcCCeEecCCCCCCcceEEECCEEEEEECCC-CEEEEEEECCCC
Confidence 5555432200 0000 0000 0121 13456778899999999999 999999988654
No 179
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.15 E-value=4.6e-05 Score=68.99 Aligned_cols=166 Identities=10% Similarity=0.029 Sum_probs=114.7
Q ss_pred eEEEEEEecCCCCCceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEe--CCEEEEEEee
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLL--GEKLFQVTWL 168 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~--g~~LyqlTwk 168 (276)
.+.+.++.. .......+.|++++ .++.+++ .+..|+.||+++++......+.. ......+++. ++.++..--.
T Consensus 171 ~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 171 KAVLKSYNA-HSSEVNCVAACPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TEEEEEECC-CSSCEEEEEECTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CcEEEEEcC-CCCCEEEEEEccCCCceeeeec--cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 456667653 34556799999876 4677666 67789999999998766654432 3334566665 4567777778
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCeeE--EeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQMKDGWG--LATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI- 244 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~~EGWG--LT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i- 244 (276)
++.+.+||..+.+.+.++......=+. +++||+.+++|= .+.+|.++|.++.++++.+ ++. ..++-+.|.
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-----~H~-~~V~~vafsP 321 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-----SHR-DFVTGVAWSP 321 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-----CCS-SCEEEEEECS
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-----CCC-CCEEEEEEeC
Confidence 899999999999999888643222233 567887665543 4678999999999877553 111 245667784
Q ss_pred -CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 245 -KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
||.++|..-.+ ..|.+=|..+.+
T Consensus 322 ~d~~~l~s~s~D-g~v~iW~~~~~~ 345 (357)
T 4g56_B 322 LDHSKFTTVGWD-HKVLHHHLPSEG 345 (357)
T ss_dssp SSTTEEEEEETT-SCEEEEECC---
T ss_pred CCCCEEEEEcCC-CeEEEEECCCCC
Confidence 68788887777 889888876643
No 180
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.15 E-value=0.00045 Score=58.83 Aligned_cols=166 Identities=11% Similarity=0.055 Sum_probs=107.4
Q ss_pred eeEEEEEEecCC-CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC-ceEEEEEEeC-CEEEEEEee
Q 023864 92 TIQVVNEFPHDP-RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLG-EKLFQVTWL 168 (276)
Q Consensus 92 t~~Vv~~~Phd~-~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~-~FgEGit~~g-~~LyqlTwk 168 (276)
.++|++ .|--. ..|.+-|.|++++.| ++| .+..|+.||++||+.++...+..+ ..-..+++.. ++..+.--.
T Consensus 13 p~rvld-ap~~~~d~y~~~l~WS~~~~l--Avg--~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~ 87 (318)
T 4ggc_A 13 PDRILD-APEIRNDYYLNLVDWSSGNVL--AVA--LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS 87 (318)
T ss_dssp CSEEEE-CTTCCCCTTCBCEEECTTSEE--EEE--ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET
T ss_pred CCEEee-CCCCcccccceEEEECCCCEE--EEE--eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC
Confidence 445664 34212 234578999987744 355 367899999999999888876643 2334566653 455555667
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEE-EEEEeeeCCEeeeeeeeeEEE-CC
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVI-RKDIVRYKGREVRNLNELEFI-KG 246 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi-~~I~V~~~g~pv~~lNELE~i-dG 246 (276)
++++.++|.++.+.+.++......-..+..+++.|........+.+++..+.... ....-.. ...+.+.+. +|
T Consensus 88 Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 162 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS-----QEVCGLRWAPDG 162 (318)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS-----SCEEEEEECTTS
T ss_pred CCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc-----CceEEEEEcCCC
Confidence 8999999999999999987543455667888888887766777777777665433 2222111 112222232 45
Q ss_pred EEEEEeCCCCCeEEEEeCCCCc
Q 023864 247 EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 247 ~lyANvw~s~d~I~vIDp~T~~ 268 (276)
...+..-.+ ..|.+.|.++++
T Consensus 163 ~~l~s~~~d-~~i~iwd~~~~~ 183 (318)
T 4ggc_A 163 RHLASGGND-NLVNVWPSAPGE 183 (318)
T ss_dssp SEEEEEETT-SCEEEEESSCBT
T ss_pred CEEEEEecC-cceeEEECCCCc
Confidence 555555455 778888887754
No 181
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.14 E-value=0.00045 Score=64.55 Aligned_cols=169 Identities=9% Similarity=-0.035 Sum_probs=112.7
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCC--CeEEEEeCCCCcEEEEeecCCCceEEEEEEeCC--EEEEEEeeC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGR--SSVRRVALETGKVEAINQMEGSYFGEGLTLLGE--KLFQVTWLQ 169 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~--S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~--~LyqlTwk~ 169 (276)
+.+.++.. ...-...+.|++||+++.+++.-.. ..|..|| +++.+....-... .-..+++..+ .++...-.+
T Consensus 107 ~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~d 182 (615)
T 1pgu_A 107 NVKSEFQV-LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-RINACHLKQSRPMRSMTVGDD 182 (615)
T ss_dssp EEEEEEEC-CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-CEEEEEECSSSSCEEEEEETT
T ss_pred cccchhhc-ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc-cEEEEEECCCCCcEEEEEeCC
Confidence 56666653 2344689999999876655552111 4666666 6766665543222 2345666543 366677788
Q ss_pred CEEEEEeCCCCcEEEEEecCCC-----CeeEEeeC-CCEEEEECCCceEEEEcCCCCcEEEEEEee--eCCEeeeeeeee
Q 023864 170 KTGFIYDQNNLNKLEEFTHQMK-----DGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVR--YKGREVRNLNEL 241 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~~-----EGWGLT~D-g~~L~vSDGS~~L~viDp~t~~vi~~I~V~--~~g~pv~~lNEL 241 (276)
+.+.+||..+.+.+.++..... ....+++| |+.|+.......|.++|..+.+.+.++.-. .... .++.+
T Consensus 183 ~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---~v~~~ 259 (615)
T 1pgu_A 183 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG---GIFAL 259 (615)
T ss_dssp TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS---CEEEE
T ss_pred CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCC---ceEEE
Confidence 9999999999999999874311 12346788 889988777889999999999988776220 1112 34556
Q ss_pred EEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 242 EFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 242 E~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.+.+|..++..-.+ ..|.+.|.++++.+
T Consensus 260 ~~~~~~~l~~~~~d-~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 260 SWLDSQKFATVGAD-ATIRVWDVTTSKCV 287 (615)
T ss_dssp EESSSSEEEEEETT-SEEEEEETTTTEEE
T ss_pred EEcCCCEEEEEcCC-CcEEEEECCCCcEE
Confidence 66666666555566 88999999996643
No 182
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.13 E-value=5.2e-05 Score=70.47 Aligned_cols=152 Identities=12% Similarity=0.049 Sum_probs=95.8
Q ss_pred CceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCC--EEEEEeCCCC
Q 023864 106 FTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQK--TGFIYDQNNL 180 (276)
Q Consensus 106 FTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~--~v~V~D~~tl 180 (276)
....+.|+|||+ |+.++..-|...|..||+++++......-+.. ...+++. +..|+.....++ .++++|.++.
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN--NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC--EEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCc--ccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 457899999986 65455544677899999999987432222222 3345554 556777775544 8999999887
Q ss_pred cEEEEEecCCCC--eeEEeeCCCEEEEEC---CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCE-EEEEeC
Q 023864 181 NKLEEFTHQMKD--GWGLATDGKVLFGSD---GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGE-VWANVW 253 (276)
Q Consensus 181 k~i~~~~~~~~E--GWGLT~Dg~~L~vSD---GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~-lyANvw 253 (276)
+. .++...... ...+++||+.|+++. |...|+++|+++.++. . +.... ....+.|. ||+ |+....
T Consensus 302 ~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~--l~~~~----~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 302 AP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-V--LSSTF----LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp CC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-E--CCCSS----SCEEEEECTTSSEEEEEEE
T ss_pred CE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-E--ecCCC----CcCCeEEcCCCCEEEEEEc
Confidence 64 333322111 234678999987743 4579999999998773 2 22211 34445565 554 443332
Q ss_pred CCCC--eEEEEeCCCCc
Q 023864 254 QVWP--CIPYAYLQAFG 268 (276)
Q Consensus 254 ~s~d--~I~vIDp~T~~ 268 (276)
.. + .|.++|.+++.
T Consensus 374 ~~-~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 374 QG-MGSVLNLVSTDGRF 389 (415)
T ss_dssp ET-TEEEEEEEETTSCC
T ss_pred CC-CccEEEEEECCCCc
Confidence 22 3 79999988654
No 183
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.12 E-value=0.00025 Score=66.84 Aligned_cols=159 Identities=11% Similarity=0.068 Sum_probs=111.6
Q ss_pred CCCCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-------CceEEEEEE---e-CCEEEEEEee-
Q 023864 102 DPRAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-------SYFGEGLTL---L-GEKLFQVTWL- 168 (276)
Q Consensus 102 d~~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-------~~FgEGit~---~-g~~LyqlTwk- 168 (276)
.+..|.+|..|+. +++||.|.= ....|.+||+..+.+... .++. ...+-||.+ + .++||++.-.
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l--~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNL--YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEET--TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred CcccCCcCccCcCCCCEEEEEec--cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 4789999999986 489999864 668999999987766544 4543 345678998 3 4799997432
Q ss_pred ------------CCEEEEEeCC---CCcEEEEEecC--CCC----------ee-EEeeCC-CEEEEEC-CC-ceEEEEcC
Q 023864 169 ------------QKTGFIYDQN---NLNKLEEFTHQ--MKD----------GW-GLATDG-KVLFGSD-GS-SMLYQIDP 217 (276)
Q Consensus 169 ------------~~~v~V~D~~---tlk~i~~~~~~--~~E----------GW-GLT~Dg-~~L~vSD-GS-~~L~viDp 217 (276)
.+.+..||+. |.+.+..+... ..+ |+ .++-|. ...||+| .. ..|+.+||
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 5889999999 88888777642 111 12 366655 4889988 46 89999999
Q ss_pred CCCcEEEEEEeee-CCEeeeeeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCC
Q 023864 218 QTLKVIRKDIVRY-KGREVRNLNELEFI-KG-EVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 218 ~t~~vi~~I~V~~-~g~pv~~lNELE~i-dG-~lyANvw~s~d~I~vIDp~T 266 (276)
..-++. ...... +......+|-+.+. || .|+|+-- . ..+.++|.++
T Consensus 167 dG~~~~-~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-g~L~~fD~~~ 215 (334)
T 2p9w_A 167 DGKTVS-TFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-RALTAFDVSK 215 (334)
T ss_dssp TSCCEE-EEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S-SSEEEEECSS
T ss_pred CCCEEe-eeeecCCCcccccCcceEEEeCCCCEEEEEcC-C-CeEEEEcCCC
Confidence 855332 222221 12233468999999 56 5667765 7 9999999774
No 184
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.11 E-value=8.9e-05 Score=63.89 Aligned_cols=123 Identities=11% Similarity=0.091 Sum_probs=88.7
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~ 173 (276)
+.+.++.- .......+.|+||+.++.+++ .+..|+.||+.+++.+....-... -..+....+..+++.-.++.+.
T Consensus 206 ~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~~d~~i~ 280 (340)
T 4aow_A 206 KLKTNHIG-HTGYLNTVTVSPDGSLCASGG--KDGQAMLWDLNEGKHLYTLDGGDI--INALCFSPNRYWLCAATGPSIK 280 (340)
T ss_dssp EEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTCEEEEEETTTTEEEEEEECSSC--EEEEEECSSSSEEEEEETTEEE
T ss_pred ceeeEecC-CCCcEEEEEECCCCCEEEEEe--CCCeEEEEEeccCceeeeecCCce--EEeeecCCCCceeeccCCCEEE
Confidence 45555542 244567999999998888777 678999999999998877665443 3456666655566666799999
Q ss_pred EEeCCCCcEEEEEecC--------C-C--CeeEEeeCCCEEEEECCCceEEEEcCCCCc
Q 023864 174 IYDQNNLNKLEEFTHQ--------M-K--DGWGLATDGKVLFGSDGSSMLYQIDPQTLK 221 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~--------~-~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~ 221 (276)
+||.++.+.+.+++.+ . . -...+++||+.|+....+..|.++|.+|++
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9999999888777521 0 1 123457899999887667889999988874
No 185
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00015 Score=61.47 Aligned_cols=129 Identities=15% Similarity=0.173 Sum_probs=89.9
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFI 174 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V 174 (276)
.+..+..........+.+++++.|+ +++ .+..|+.||+.+++.+....-... .-..+++..+..+...-.++.+.+
T Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~~~-~~~--~dg~i~i~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~l~~~~~dg~v~i 250 (313)
T 3odt_A 175 VIKTFSGIHNDVVRHLAVVDDGHFI-SCS--NDGLIKLVDMHTGDVLRTYEGHES-FVYCIKLLPNGDIVSCGEDRTVRI 250 (313)
T ss_dssp EEEEECSSCSSCEEEEEEEETTEEE-EEE--TTSEEEEEETTTCCEEEEEECCSS-CEEEEEECTTSCEEEEETTSEEEE
T ss_pred eEEEEeccCcccEEEEEEcCCCeEE-Ecc--CCCeEEEEECCchhhhhhhhcCCc-eEEEEEEecCCCEEEEecCCEEEE
Confidence 4445543345667899999998944 444 677899999999998887754332 234677765423455567899999
Q ss_pred EeCCCCcEEEEEecCCCCeeE--EeeCCCEEEEECCCceEEEEcCCCCcEEEEEEe
Q 023864 175 YDQNNLNKLEEFTHQMKDGWG--LATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (276)
Q Consensus 175 ~D~~tlk~i~~~~~~~~EGWG--LT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V 228 (276)
||..+.+.+.++......-+. +++||+ ++++..+..|.++|.++.+.+.+...
T Consensus 251 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 251 WSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp ECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC----
T ss_pred EECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 999999999999765323334 567887 55556688999999998877655544
No 186
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00024 Score=64.42 Aligned_cols=161 Identities=10% Similarity=0.005 Sum_probs=112.3
Q ss_pred CCceEEE--EecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCC
Q 023864 105 AFTQGLL--YAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~--~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tl 180 (276)
.+.-.+. +++|+.++.+++ .+..|+.||+.+++.+.....+ ..-.-..+++. ++++....-.++.+.+||..+.
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 169 EYAVRMRAFVNEEKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp CCEEEEEEEECSSCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cCceEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 3444454 446777777666 6789999999999998887653 12234466665 3455556667899999999999
Q ss_pred cEEEEEecCCCCe-eEE----e--eCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeC--------------------C-
Q 023864 181 NKLEEFTHQMKDG-WGL----A--TDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--------------------G- 232 (276)
Q Consensus 181 k~i~~~~~~~~EG-WGL----T--~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~--------------------g- 232 (276)
+.+.++..+.... ..+ + +|++.|+.+..+..|.++|..+.+.++.+.-... |
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 247 VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 9999987542111 223 2 4566777777778999999999998887763310 0
Q ss_pred EeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 233 REVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 233 ~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
.....++-|.+.+|...+..-.+ ..|.+-|.++++
T Consensus 327 ~~~~~v~~l~~~~~~~l~s~~~d-~~i~~wd~~~~~ 361 (437)
T 3gre_A 327 RSLNALSTISVSNDKILLTDEAT-SSIVMFSLNELS 361 (437)
T ss_dssp CSGGGGCCEEEETTEEEEEEGGG-TEEEEEETTCGG
T ss_pred ccCCceEEEEECCceEEEecCCC-CeEEEEECCCcc
Confidence 01123566778888877777677 999999999876
No 187
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.10 E-value=0.00016 Score=62.55 Aligned_cols=160 Identities=9% Similarity=0.053 Sum_probs=104.0
Q ss_pred EEEEecCCCCCceEEEEecC---CEEEEEcCCCCCCeEEEEeCCCCc-EEEEeecCCCceEEEEEEe-------CCEEEE
Q 023864 96 VNEFPHDPRAFTQGLLYAEN---DTLFESTGLYGRSSVRRVALETGK-VEAINQMEGSYFGEGLTLL-------GEKLFQ 164 (276)
Q Consensus 96 v~~~Phd~~aFTQGL~~~~d---g~LyeStG~yg~S~I~~iDl~tgk-v~~~~~l~~~~FgEGit~~-------g~~Lyq 164 (276)
+..+.| ......+.|+++ |.++.+++ .+..|+.||+++++ ......-... --..+... ++++..
T Consensus 59 ~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~s~~~~~l~ 133 (357)
T 3i2n_A 59 LREIEK--AKPIKCGTFGATSLQQRYLATGD--FGGNLHIWNLEAPEMPVYSVKGHKE-IINAIDGIGGLGIGEGAPEIV 133 (357)
T ss_dssp EEEEEE--SSCEEEEECTTCCTTTCCEEEEE--TTSCEEEECTTSCSSCSEEECCCSS-CEEEEEEESGGGCC-CCCEEE
T ss_pred eeeecc--cCcEEEEEEcCCCCCCceEEEec--CCCeEEEEeCCCCCccEEEEEeccc-ceEEEeeccccccCCCccEEE
Confidence 444566 344579999988 56666555 67789999999987 5444432222 12334321 244455
Q ss_pred EEeeCCEEEEEeCCCCc-EEEEEecCC----CCeeEEe------eCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCE
Q 023864 165 VTWLQKTGFIYDQNNLN-KLEEFTHQM----KDGWGLA------TDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGR 233 (276)
Q Consensus 165 lTwk~~~v~V~D~~tlk-~i~~~~~~~----~EGWGLT------~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~ 233 (276)
..-.++.+.+||..+.+ .+.++.... ..-+.++ +|++.|+....+..|.++|..+.+.+......
T Consensus 134 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---- 209 (357)
T 3i2n_A 134 TGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK---- 209 (357)
T ss_dssp EEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS----
T ss_pred EEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC----
Confidence 55678999999999887 677775321 1344554 78999988877889999999999875443332
Q ss_pred eeeeeeeeEEE----CCEEEEEeCCCCCeEEEEeCCCC
Q 023864 234 EVRNLNELEFI----KGEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 234 pv~~lNELE~i----dG~lyANvw~s~d~I~vIDp~T~ 267 (276)
..++.+.+. +|..++..-.. ..|.+.|.+++
T Consensus 210 --~~v~~~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 244 (357)
T 3i2n_A 210 --NGVCSLEFDRKDISMNKLVATSLE-GKFHVFDMRTQ 244 (357)
T ss_dssp --SCEEEEEESCSSSSCCEEEEEEST-TEEEEEEEEEE
T ss_pred --CceEEEEcCCCCCCCCEEEEECCC-CeEEEEeCcCC
Confidence 145556676 45545445456 78888887764
No 188
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.08 E-value=0.00011 Score=64.54 Aligned_cols=156 Identities=10% Similarity=0.060 Sum_probs=106.7
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec------------CCCceEEEEEEe--CCEEEEEEee
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQM------------EGSYFGEGLTLL--GEKLFQVTWL 168 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l------------~~~~FgEGit~~--g~~LyqlTwk 168 (276)
..-...+.|+| ++.++.+++ .+..|+.||+++++....... +..---..+++. ++.++...-.
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGG--SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEE--TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred CCcEEEEEEecCCCCEEEEEc--CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 45567999999 888777666 677899999998764333220 111123455554 3456666667
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCeeE--Eee---CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEE
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQMKDGWG--LAT---DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~~EGWG--LT~---Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~ 243 (276)
++.+.+||..+.+.+..+..+ ..... +.+ ++..+++......|.++|..+.+.+..+.-.. ..++.+.+
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~v~~~~~ 194 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFE-ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR-----QEILAVSW 194 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECS-SCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC-----SCEEEEEE
T ss_pred CCeEEEeeCCCCccceeccCC-CceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC-----CcEEEEEE
Confidence 899999999999999998865 23333 444 44577777778899999999988776654322 13455566
Q ss_pred E-CCE-EEEEeCCCCCeEEEEeCCCCc
Q 023864 244 I-KGE-VWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 244 i-dG~-lyANvw~s~d~I~vIDp~T~~ 268 (276)
. +|. ++|..-.+ ..|.+.|..+++
T Consensus 195 ~~~~~~ll~~~~~d-g~i~i~d~~~~~ 220 (408)
T 4a11_B 195 SPRYDYILATASAD-SRVKLWDVRRAS 220 (408)
T ss_dssp CSSCTTEEEEEETT-SCEEEEETTCSS
T ss_pred CCCCCcEEEEEcCC-CcEEEEECCCCC
Confidence 6 343 66666566 889999987754
No 189
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.08 E-value=7.2e-05 Score=65.79 Aligned_cols=163 Identities=10% Similarity=-0.024 Sum_probs=109.8
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tl 180 (276)
..-...+.|++ ++.++.+++ .+..|+.||+++++.......+.......+... ++.++...-.++.+.+||..+.
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSS--FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred CCcEEEEEEccCCCcEEEEEe--CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 45567999998 566666666 678999999999999888887766554333333 2447777788999999999999
Q ss_pred cEEEEEecCCC--CeeEEeeCCCE-EEEECCCceEEEEcCCCCc-EEEEEEeeeC----------CEeeeeeeeeEEE-C
Q 023864 181 NKLEEFTHQMK--DGWGLATDGKV-LFGSDGSSMLYQIDPQTLK-VIRKDIVRYK----------GREVRNLNELEFI-K 245 (276)
Q Consensus 181 k~i~~~~~~~~--EGWGLT~Dg~~-L~vSDGS~~L~viDp~t~~-vi~~I~V~~~----------g~pv~~lNELE~i-d 245 (276)
+.+.++.-... ....++++++. |+....+..|.++|..+.+ .+..+..... ...-..++.+.+. +
T Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 98888863211 23446788886 5555567889999998765 2222211100 0011234555665 5
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v 269 (276)
|...+..-.+ ..|.+.|..+++.
T Consensus 257 ~~~l~~~~~d-g~i~vwd~~~~~~ 279 (408)
T 4a11_B 257 GLHLLTVGTD-NRMRLWNSSNGEN 279 (408)
T ss_dssp SSEEEEEETT-SCEEEEETTTCCB
T ss_pred CCEEEEecCC-CeEEEEECCCCcc
Confidence 5555555566 8899999998764
No 190
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.06 E-value=9.1e-05 Score=69.85 Aligned_cols=154 Identities=11% Similarity=0.133 Sum_probs=97.4
Q ss_pred CCceEEEEec--CC--EEEEEcCCCCCCeEEEEe--CCCCcEEEEeecCC--CceEEEEEEe-CCEEEEEEe--------
Q 023864 105 AFTQGLLYAE--ND--TLFESTGLYGRSSVRRVA--LETGKVEAINQMEG--SYFGEGLTLL-GEKLFQVTW-------- 167 (276)
Q Consensus 105 aFTQGL~~~~--dg--~LyeStG~yg~S~I~~iD--l~tgkv~~~~~l~~--~~FgEGit~~-g~~LyqlTw-------- 167 (276)
-.+-|+.+.. || +||+..-..+.+.|..++ .+++.......+.. -.+.-.++++ ++++|+-+.
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 4566999866 35 588875544567766654 54444332223332 2345566665 589998875
Q ss_pred ---------eCCEEEEEeCCCCcEE-EEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCC-CCcEEEEEEeeeCCEee
Q 023864 168 ---------LQKTGFIYDQNNLNKL-EEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKVIRKDIVRYKGREV 235 (276)
Q Consensus 168 ---------k~~~v~V~D~~tlk~i-~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~-t~~vi~~I~V~~~g~pv 235 (276)
..+.++.||+.+.+++ ..+.. +.|.++++||+.||++| +..+|+.+|.+ +.++...-.+...|
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~--pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g--- 266 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPNDVRVVAEGFDF--ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDT--- 266 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTTCCEEEEEEESS--EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSS---
T ss_pred ccchhhccCCccEEEEEECCeEEEeecCCcc--cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCC---
Confidence 2468889999765544 23443 58999999999999999 78999998864 34443221122233
Q ss_pred eeeeeeEEE--CCEEEE-EeCCCCCeEEEEeCC
Q 023864 236 RNLNELEFI--KGEVWA-NVWQVWPCIPYAYLQ 265 (276)
Q Consensus 236 ~~lNELE~i--dG~lyA-Nvw~s~d~I~vIDp~ 265 (276)
.+.-|.+. +|.||+ +.|.. -+|.++||+
T Consensus 267 -~PDGi~vD~e~G~lwva~~~~g-~~v~~~~P~ 297 (355)
T 3sre_A 267 -LVDNISVDPVTGDLWVGCHPNG-MRIFFYDAE 297 (355)
T ss_dssp -EEEEEEECTTTCCEEEEEESCH-HHHHSCCTT
T ss_pred -CCceEEEeCCCCcEEEEecCCc-eEEEEECCC
Confidence 33445566 389998 55775 566666665
No 191
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.05 E-value=0.0025 Score=56.19 Aligned_cols=163 Identities=13% Similarity=0.022 Sum_probs=105.8
Q ss_pred EEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEE
Q 023864 96 VNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFI 174 (276)
Q Consensus 96 v~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V 174 (276)
+.++.. ....+..+.|++||.++.+++ .+..|+.||+++++......-... --..+++.. +.+.+..-.++++.+
T Consensus 58 ~~~~~~-h~~~v~~~~~s~dg~~l~s~s--~D~~v~~wd~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~v 133 (319)
T 3frx_A 58 VRSFKG-HSHIVQDCTLTADGAYALSAS--WDKTLRLWDVATGETYQRFVGHKS-DVMSVDIDKKASMIISGSRDKTIKV 133 (319)
T ss_dssp EEEEEC-CSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSCEEEEEETTSCEEE
T ss_pred ceEEeC-CcccEEEEEECCCCCEEEEEe--CCCEEEEEECCCCCeeEEEccCCC-cEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 445542 355668999999998877777 788999999999998776542222 123455543 455556667889999
Q ss_pred EeCCCCcEEEEEecCCCCee--EEee------CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-C
Q 023864 175 YDQNNLNKLEEFTHQMKDGW--GLAT------DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (276)
Q Consensus 175 ~D~~tlk~i~~~~~~~~EGW--GLT~------Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-d 245 (276)
||.+. +.+.++.-....-. .+.+ |+..|+....+..|.++|.++++....+.-.. ..++-+.+. +
T Consensus 134 wd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-----~~v~~~~~sp~ 207 (319)
T 3frx_A 134 WTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN-----SNINTLTASPD 207 (319)
T ss_dssp EETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC-----SCEEEEEECTT
T ss_pred EECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC-----CcEEEEEEcCC
Confidence 99865 34444431111111 2333 34456665568899999999988765543211 234555665 5
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 246 GEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~T~~v 269 (276)
|...|..-.+ ..|.+-|.++++.
T Consensus 208 g~~l~s~~~d-g~i~iwd~~~~~~ 230 (319)
T 3frx_A 208 GTLIASAGKD-GEIMLWNLAAKKA 230 (319)
T ss_dssp SSEEEEEETT-CEEEEEETTTTEE
T ss_pred CCEEEEEeCC-CeEEEEECCCCcE
Confidence 6777776666 8999999998554
No 192
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.04 E-value=0.00074 Score=59.59 Aligned_cols=160 Identities=9% Similarity=0.047 Sum_probs=104.3
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-------CEEEEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-------EKLFQVT 166 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-------~~LyqlT 166 (276)
+.++++.. ...-...+.|++++.++.+++ .+..|+.||++...+ ... .+....-..+.+.. +.++...
T Consensus 98 ~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s--~D~~i~vwd~~~~~~-~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~ 172 (319)
T 3frx_A 98 ETYQRFVG-HKSDVMSVDIDKKASMIISGS--RDKTIKVWTIKGQCL-ATL-LGHNDWVSQVRVVPNEKADDDSVTIISA 172 (319)
T ss_dssp EEEEEEEC-CSSCEEEEEECTTSCEEEEEE--TTSCEEEEETTSCEE-EEE-CCCSSCEEEEEECCC------CCEEEEE
T ss_pred CeeEEEcc-CCCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeE-EEE-eccCCcEEEEEEccCCCCCCCccEEEEE
Confidence 45566642 244457999999988888777 778999999975543 332 12222223444432 2355556
Q ss_pred eeCCEEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE
Q 023864 167 WLQKTGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 167 wk~~~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i 244 (276)
-.++.+.+||..+.+...++.-... ....+++||+.|.....+..|.++|..+.+.+.++.... .++.+.+.
T Consensus 173 ~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~v~~~~~s 246 (319)
T 3frx_A 173 GNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD------EVFSLAFS 246 (319)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS------CEEEEEEC
T ss_pred eCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC------cEEEEEEc
Confidence 6789999999999998888752211 233467899998887778899999999999888776432 34455565
Q ss_pred -CCEEEEEeCCCCCeEEEEeCCC
Q 023864 245 -KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vIDp~T 266 (276)
+|...|.. .. +.|.+.|.++
T Consensus 247 p~~~~la~~-~~-~~i~v~~~~~ 267 (319)
T 3frx_A 247 PNRYWLAAA-TA-TGIKVFSLDP 267 (319)
T ss_dssp SSSSEEEEE-ET-TEEEEEEETT
T ss_pred CCCCEEEEE-cC-CCcEEEEeCc
Confidence 44433333 24 5566666655
No 193
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.04 E-value=0.00091 Score=61.86 Aligned_cols=163 Identities=11% Similarity=0.088 Sum_probs=99.5
Q ss_pred eeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc-EEEEeec--CCCceEEEEEEeC-----CE
Q 023864 90 IYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK-VEAINQM--EGSYFGEGLTLLG-----EK 161 (276)
Q Consensus 90 ~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk-v~~~~~l--~~~~FgEGit~~g-----~~ 161 (276)
-++++++.+ .-....|+++++||+||++.- . ..|+++| .+|+ .+..+++ ...--..||+++. ++
T Consensus 18 ~~~~~~va~----~l~~P~~ia~~pdG~l~V~e~--~-g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~ 89 (354)
T 3a9g_A 18 KFKISEVAS----DLEVPWSIAPLGGGRYLVTER--P-GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSW 89 (354)
T ss_dssp CEEEEEEEC----SCSCEEEEEEEETTEEEEEET--T-TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCE
T ss_pred CeEEEEEeC----CCCCCeEEEEcCCCeEEEEeC--C-CEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCE
Confidence 356666654 233456999999999998754 3 7899998 4565 2222221 1112356889884 59
Q ss_pred EEEEEee---C----CEEEEEeCCCC-------cE-EEEEecC---CCCeeEEeeCCCEEEEECCC--------------
Q 023864 162 LFQVTWL---Q----KTGFIYDQNNL-------NK-LEEFTHQ---MKDGWGLATDGKVLFGSDGS-------------- 209 (276)
Q Consensus 162 LyqlTwk---~----~~v~V~D~~tl-------k~-i~~~~~~---~~EGWGLT~Dg~~L~vSDGS-------------- 209 (276)
||+.... + +++..++.+.- +. +..++.. .+.+..+.+|| .||+++|+
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~ 168 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLA 168 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCS
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCC
Confidence 9999875 3 78899987543 22 2334421 23556677888 59999874
Q ss_pred ceEEEEcCCCCcEEE-----EEEeeeCCEeeeeeeeeEEEC--CEEEEEeCCC--CCeEEEEeC
Q 023864 210 SMLYQIDPQTLKVIR-----KDIVRYKGREVRNLNELEFIK--GEVWANVWQV--WPCIPYAYL 264 (276)
Q Consensus 210 ~~L~viDp~t~~vi~-----~I~V~~~g~pv~~lNELE~id--G~lyANvw~s--~d~I~vIDp 264 (276)
.+|..+|+.. ++-. ...+-.. -+.+++.|.+.. |.||++.... ++.|-+|.+
T Consensus 169 G~I~ri~~dG-~~p~~npf~~~~i~a~--G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 169 GKILRVDEEG-RPPADNPFPNSPIWSY--GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK 229 (354)
T ss_dssp SEEEEECTTS-CCCTTSSSTTCCEEEE--CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT
T ss_pred eEEEEEcCCC-CCCCCCCCCCCcEEEE--ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC
Confidence 3677777753 1100 0001111 135788888884 7899877665 135777765
No 194
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.03 E-value=0.00021 Score=64.28 Aligned_cols=168 Identities=11% Similarity=-0.047 Sum_probs=108.4
Q ss_pred EEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCC-CcEEEEee-----cC-CCceEEEEEEeCC--EEEEEEee
Q 023864 98 EFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALET-GKVEAINQ-----ME-GSYFGEGLTLLGE--KLFQVTWL 168 (276)
Q Consensus 98 ~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~t-gkv~~~~~-----l~-~~~FgEGit~~g~--~LyqlTwk 168 (276)
.+..........+.|++++.++.+ | .+..|+.||+++ ++...... +. ..-.-..+++..+ .++...-.
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s-~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLS-A--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEE-E--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET
T ss_pred EeccCCCcceEEEEEcCCCCEEEE-e--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC
Confidence 443334556679999999887765 4 488999999994 44444331 11 1122345666542 56666667
Q ss_pred CCEEEEEeCCCCcE----EEEEecCC--------------CCeeEEeeCCCEEEEECCCceEEEEcCCC-CcEEEEEEee
Q 023864 169 QKTGFIYDQNNLNK----LEEFTHQM--------------KDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVR 229 (276)
Q Consensus 169 ~~~v~V~D~~tlk~----i~~~~~~~--------------~EGWGLT~Dg~~L~vSDGS~~L~viDp~t-~~vi~~I~V~ 229 (276)
++.+.+||..+.+. +..+.... -....+++||+.|+..+. ..|.++|..+ .+.+.++...
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESC
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecc
Confidence 89999999998886 67775431 123346789999988766 9999999987 7666666543
Q ss_pred eCCE----------eeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 230 YKGR----------EVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 230 ~~g~----------pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
..-. .+.....+.+. +|...|..-.+ ..|.+.|.++++.+
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-g~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-NFFRMFDRNTKRDI 377 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-TEEEEEETTTCCEE
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEeccC-CEEEEEEcCCCcce
Confidence 2100 00001125555 55544666566 89999999997765
No 195
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.02 E-value=0.00031 Score=70.12 Aligned_cols=161 Identities=12% Similarity=0.061 Sum_probs=108.7
Q ss_pred ceEEEEec-CCE----EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC----ceEEEEEEeCCEEEEEEe-----eCCEE
Q 023864 107 TQGLLYAE-NDT----LFESTGLYGRSSVRRVALETGKVEAINQMEGS----YFGEGLTLLGEKLFQVTW-----LQKTG 172 (276)
Q Consensus 107 TQGL~~~~-dg~----LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~----~FgEGit~~g~~LyqlTw-----k~~~v 172 (276)
..|+.+.+ +++ +|..+. +..|..+|.+||+++=+..++.. .+...-++.++++|+-+. .++.+
T Consensus 108 ~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v 184 (599)
T 1w6s_A 108 NRGLAYWPGDGKTPALILKTQL---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYL 184 (599)
T ss_dssp CCCCEEECCCSSSCCEEEEECT---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEE
T ss_pred ccceEEEecCCcceeEEEEEcC---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeE
Confidence 45788832 466 998654 46899999999999888877641 111223456889998775 36899
Q ss_pred EEEeCCCCcEEEEEecCCCC-------------------------------------ee---EEeeCCCEEEEECCC---
Q 023864 173 FIYDQNNLNKLEEFTHQMKD-------------------------------------GW---GLATDGKVLFGSDGS--- 209 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~~~E-------------------------------------GW---GLT~Dg~~L~vSDGS--- 209 (276)
+.||++|.+++-++....+. -| .+.++...+|+..|.
T Consensus 185 ~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p 264 (599)
T 1w6s_A 185 TAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP 264 (599)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred EEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc
Confidence 99999999999998754211 12 244567789987653
Q ss_pred -------------ceEEEEcCCCCcEEEEEEeeeC------CEeeeeeeeeEEECC---EEEEEeCCCCCeEEEEeCCCC
Q 023864 210 -------------SMLYQIDPQTLKVIRKDIVRYK------GREVRNLNELEFIKG---EVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 210 -------------~~L~viDp~t~~vi~~I~V~~~------g~pv~~lNELE~idG---~lyANvw~s~d~I~vIDp~T~ 267 (276)
+.|+-+|++|++++=+.+.... +..-..+-+++.+|| .+++..-.+ ..+.++|.+||
T Consensus 265 ~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~-G~l~~lD~~tG 343 (599)
T 1w6s_A 265 WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRN-GIVYTLDRTDG 343 (599)
T ss_dssp SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTT-SEEEEEETTTC
T ss_pred ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCC-cEEEEEECCCC
Confidence 5899999999999866665421 100011212222467 555544456 89999999998
Q ss_pred cEEE
Q 023864 268 GSSL 271 (276)
Q Consensus 268 ~v~l 271 (276)
+.+-
T Consensus 344 ~~lw 347 (599)
T 1w6s_A 344 ALVS 347 (599)
T ss_dssp CEEE
T ss_pred CEee
Confidence 8764
No 196
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.02 E-value=0.00061 Score=70.32 Aligned_cols=169 Identities=6% Similarity=-0.051 Sum_probs=114.6
Q ss_pred eeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 91 ~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
+..+....+-|. .-+..++|+||++++.+++ .+..|+.||..+++......-... -..+++..+++.+..-.++
T Consensus 6 ~~~~~~~~~gh~--~~V~~lafspdg~~lAsgs--~Dg~I~lw~~~~~~~~~~~~~~~~--V~~l~fspg~~L~S~s~D~ 79 (902)
T 2oaj_A 6 FSLAETNKYGMS--SKPIAAAFDFTQNLLAIAT--VTGEVHIYGQQQVEVVIKLEDRSA--IKEMRFVKGIYLVVINAKD 79 (902)
T ss_dssp EEEEEEEEEECS--SCEEEEEEETTTTEEEEEE--TTSEEEEECSTTCEEEEECSSCCC--EEEEEEETTTEEEEEETTC
T ss_pred eeeccccccCCC--CCcEEEEECCCCCEEEEEe--CCCEEEEEeCCCcEEEEEcCCCCC--EEEEEEcCCCEEEEEECcC
Confidence 455666677773 3456999999998877665 667999999998877555332222 2355655555444444789
Q ss_pred EEEEEeCCCCcEEEEEecCCCCee--EEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEe--------eeCCEeeeeeee
Q 023864 171 TGFIYDQNNLNKLEEFTHQMKDGW--GLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV--------RYKGREVRNLNE 240 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~~~EGW--GLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V--------~~~g~pv~~lNE 240 (276)
++.+||.++.+.+.++..+ .+=+ .+.+||++|++...+..|.++|.++.+.. ...+ ...++ ...++.
T Consensus 80 ~v~lWd~~~~~~~~~~~~~-~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h-~~~V~s 156 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVFVP-GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAAR-LSPIVS 156 (902)
T ss_dssp EEEEEETTTCSEEEEEECS-SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSC-CCCCCE
T ss_pred eEEEEECCCCcEEEEEcCC-CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccC-CCCeEE
Confidence 9999999999999998754 2223 35689999999888899999999998764 2222 11122 124556
Q ss_pred eEEEC--CEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 241 LEFIK--GEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 241 LE~id--G~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+.+.. +.+.+.-... ..| +-|.++++..
T Consensus 157 l~~sp~~~~~l~~g~~d-g~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 157 IQWNPRDIGTVLISYEY-VTL-TYSLVENEIK 186 (902)
T ss_dssp EEEETTEEEEEEEECSS-CEE-EEETTTTEEE
T ss_pred EEEccCCCCEEEEEeCC-CcE-EEECCCCceE
Confidence 67774 3455555555 777 9999986543
No 197
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.01 E-value=0.00051 Score=63.55 Aligned_cols=166 Identities=12% Similarity=0.038 Sum_probs=98.0
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCC-----------CeEEEEeCCCCcEE--------EEeecCCCceEEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGR-----------SSVRRVALETGKVE--------AINQMEGSYFGEGL 155 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~-----------S~I~~iDl~tgkv~--------~~~~l~~~~FgEGi 155 (276)
++..+|.....+..+|.|++||.||.+.|..+. .+|.++|++. ++- .....+- ..+.||
T Consensus 125 l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~npf~~~~i~a~G~-rnp~Gl 202 (354)
T 3a9g_A 125 LIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADNPFPNSPIWSYGH-RNPQGI 202 (354)
T ss_dssp EEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTSSSTTCCEEEECC-SCCCEE
T ss_pred EEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCCCCCCCcEEEEcc-CCcceE
Confidence 456678544456789999999999999986432 4788888763 210 0111121 124477
Q ss_pred EEeC--CEEEEEEeeCCE---EEEEeCCC----------------CcEEEEEecC--CCCeeEEee------CCCEEEEE
Q 023864 156 TLLG--EKLFQVTWLQKT---GFIYDQNN----------------LNKLEEFTHQ--MKDGWGLAT------DGKVLFGS 206 (276)
Q Consensus 156 t~~g--~~LyqlTwk~~~---v~V~D~~t----------------lk~i~~~~~~--~~EGWGLT~------Dg~~L~vS 206 (276)
+++. ++||+.....+. +.++.+.. ..++..++.+ .+.|..+.. ....||++
T Consensus 203 a~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~ 282 (354)
T 3a9g_A 203 DWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIA 282 (354)
T ss_dssp EECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEE
T ss_pred EEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEE
Confidence 8874 799999887653 55554322 1222333111 223333310 23488888
Q ss_pred C-CCceEEEEcCCCC-cEEEEEEe--eeCCEeeeeeeeeEEE-CCEEEEEeCCCCC---------eEEEEeCCC
Q 023864 207 D-GSSMLYQIDPQTL-KVIRKDIV--RYKGREVRNLNELEFI-KGEVWANVWQVWP---------CIPYAYLQA 266 (276)
Q Consensus 207 D-GS~~L~viDp~t~-~vi~~I~V--~~~g~pv~~lNELE~i-dG~lyANvw~s~d---------~I~vIDp~T 266 (276)
| ...+|+.++++.. ++...-.+ +..++| -.+++. ||.||+..|.... .|.+|.++.
T Consensus 283 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp----~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 283 CLRGSMLAAVNFGDNMEVRKISTFFKNVFGRL----RDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp ETTTTEEEEEEECGGGCEEEEEEECTTTSCCE----EEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred EcCCCEEEEEEECCCCcccceeeeccCCCCCe----eEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 8 6889999998864 44322222 212333 345554 7899999985313 899998864
No 198
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00026 Score=61.60 Aligned_cols=158 Identities=6% Similarity=0.001 Sum_probs=101.9
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCC--CcEEEEeecCCCceEEEEEEe-C--CEEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALET--GKVEAINQMEGSYFGEGLTLL-G--EKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~t--gkv~~~~~l~~~~FgEGit~~-g--~~LyqlTwk~~~v~V~D~~ 178 (276)
..-+..+.|++|+.++.+++ .+..|++||+++ ++......-... --..+++. + +++....-.++.+.+||..
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred cccEEEEEEcCCCCEEEEEE--CCCcEEEEecCCCcceeeeEecCCCC-cEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 44457999999988777666 577899999984 444444322222 22456664 2 4555555668999999999
Q ss_pred CCc--EEEEEecCCCC--eeEEeeC--CCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE--------
Q 023864 179 NLN--KLEEFTHQMKD--GWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-------- 244 (276)
Q Consensus 179 tlk--~i~~~~~~~~E--GWGLT~D--g~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-------- 244 (276)
+.+ .+..+...... ...+.++ ++.|+....+..|.++|..+.+....+....... .++-+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDG 164 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT---CEEEEEECCCC-----
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC---ceEEEEEcCccccccc
Confidence 887 55555422122 2335677 8888888888899999999885544444433222 23445565
Q ss_pred ------CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 245 ------KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 245 ------dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
|+..++..-.+ ..|.+.|.++++
T Consensus 165 ~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~ 193 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGAD-NLVKIWKYNSDA 193 (379)
T ss_dssp -----CTTCEEEEEETT-SCEEEEEEETTT
T ss_pred cccCCCCCCEEEEEeCC-CeEEEEEecCCC
Confidence 36666655566 788888887754
No 199
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.99 E-value=0.00042 Score=69.28 Aligned_cols=156 Identities=15% Similarity=0.071 Sum_probs=107.7
Q ss_pred ceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC----ceEEEEEEeCCEEEEEEee-----CCEEEEEeC
Q 023864 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS----YFGEGLTLLGEKLFQVTWL-----QKTGFIYDQ 177 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~----~FgEGit~~g~~LyqlTwk-----~~~v~V~D~ 177 (276)
..|+.+. ++++|..+. +..|..+|.+||+++-+.+++.. .....-.+.++++|+.+.. ++.++.+|+
T Consensus 110 ~~~~~~~-~~~v~v~~~---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~ 185 (668)
T 1kv9_A 110 NRGVALW-GDKVYVGTL---DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDA 185 (668)
T ss_dssp CCCCEEE-BTEEEEECT---TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEET
T ss_pred ccceEEE-CCEEEEEcC---CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEEC
Confidence 3577776 589998753 46899999999999888776421 1112234568999998764 589999999
Q ss_pred CCCcEEEEEecC--CCCe-------------------------------eEEeeCCCEEEEECCCc--------------
Q 023864 178 NNLNKLEEFTHQ--MKDG-------------------------------WGLATDGKVLFGSDGSS-------------- 210 (276)
Q Consensus 178 ~tlk~i~~~~~~--~~EG-------------------------------WGLT~Dg~~L~vSDGS~-------------- 210 (276)
+|.+++-++... .+++ ..+.++++.+|+..+..
T Consensus 186 ~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd 265 (668)
T 1kv9_A 186 DTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGD 265 (668)
T ss_dssp TTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCC
T ss_pred CCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCC
Confidence 999999998742 1111 12445678899865432
Q ss_pred -----eEEEEcCCCCcEEEEEEeeeCC-------EeeeeeeeeEEECCE----EEEEeCCCCCeEEEEeCCCCcEE
Q 023864 211 -----MLYQIDPQTLKVIRKDIVRYKG-------REVRNLNELEFIKGE----VWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 211 -----~L~viDp~t~~vi~~I~V~~~g-------~pv~~lNELE~idG~----lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.|+-+|++|++++=+.++.... .|. .+.+++ +||+ |++.. .. ..+.++|.+||+.+
T Consensus 266 ~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~-~~~d~~-~~G~~~~~v~~~~-~~-G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 266 NLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI-TLAELN-IDGKPRKVLMQAP-KN-GFFYVLDRTNGKLI 337 (668)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE-EEEEEE-ETTEEEEEEEECC-TT-SEEEEEETTTCCEE
T ss_pred ceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc-EEEEec-cCCcEEEEEEEEC-CC-CEEEEEECCCCCEe
Confidence 5999999999998877764211 111 233444 3675 44443 45 79999999998876
No 200
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.99 E-value=0.00016 Score=62.74 Aligned_cols=153 Identities=9% Similarity=0.016 Sum_probs=98.0
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~ 173 (276)
++.+++.+ ......+.++++|.||.++ ..|..+| .+|+...+...+.. ...++..++ +.||+.|. ++.++
T Consensus 168 ~~~~~~~~-~~~~~~~~~d~~g~l~v~t-----~~l~~~d-~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t~-~~gl~ 238 (330)
T 3hxj_A 168 EKWRFKTN-DAITSAASIGKDGTIYFGS-----DKVYAIN-PDGTEKWNFYAGYW-TVTRPAISEDGTIYVTSL-DGHLY 238 (330)
T ss_dssp EEEEEECS-SCCCSCCEECTTCCEEEES-----SSEEEEC-TTSCEEEEECCSSC-CCSCCEECTTSCEEEEET-TTEEE
T ss_pred EeEEEecC-CCceeeeEEcCCCEEEEEe-----CEEEEEC-CCCcEEEEEccCCc-ceeceEECCCCeEEEEcC-CCeEE
Confidence 44455543 3344577887789999876 6799999 78887777665532 123556665 49999986 56788
Q ss_pred EEeCCCCcEEEEEecCCCCeeEEeeC-CCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEE-ECCEEEEE
Q 023864 174 IYDQNNLNKLEEFTHQMKDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF-IKGEVWAN 251 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~~EGWGLT~D-g~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~-idG~lyAN 251 (276)
.+|+ +.+.+.+++.+.+--..+..| +..||++.....|+.+|+ +++.+....... . ..+-+.. .+|+||+.
T Consensus 239 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~--~---~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 239 AINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGS--W---IIATPVIDENGTIYFG 311 (330)
T ss_dssp EECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSS--C---CCSCCEECTTCCEEEE
T ss_pred EECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCC--c---cccceEEcCCCEEEEE
Confidence 8885 556666776441111123334 668898877778999997 687776665532 1 2233334 47899986
Q ss_pred eCCCCCeEEEEeCCC
Q 023864 252 VWQVWPCIPYAYLQA 266 (276)
Q Consensus 252 vw~s~d~I~vIDp~T 266 (276)
-- +-++.++|..
T Consensus 312 t~---~G~~~~~~~~ 323 (330)
T 3hxj_A 312 TR---NGKFYALFNL 323 (330)
T ss_dssp CT---TSCEEEEEC-
T ss_pred cC---CCeEEEEecc
Confidence 53 4456666554
No 201
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.99 E-value=0.00027 Score=64.06 Aligned_cols=161 Identities=13% Similarity=0.110 Sum_probs=110.6
Q ss_pred CCCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCC-CcEEEEeecC-CCceEEEEEEeC-CEEEEEEeeCCEEEEEeCC
Q 023864 103 PRAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALET-GKVEAINQME-GSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 103 ~~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~t-gkv~~~~~l~-~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~ 178 (276)
.......+.+.+ ++.++.+++ .+..|+.||+.. ++.+....-- ... ..+++.. ++.++..-.++++.+||..
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v--~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDI--NSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCC--CEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CccCeEEEEeecCCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCe--EEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 345566888865 677888777 788999999974 4443333211 122 2455553 4566666788999999999
Q ss_pred CCcEEEEEecCC---------CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEE
Q 023864 179 NLNKLEEFTHQM---------KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEV 248 (276)
Q Consensus 179 tlk~i~~~~~~~---------~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~l 248 (276)
+.+.+..+.... -....+++||+.|+....+..|+++|..+.+.+..+.....++. ..++.|.+. ||..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~-~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHE-GRISCLGLSSDGSA 358 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCC-CCCCEEEECSSSSE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCC-CceEEEEECCCCCE
Confidence 999988885420 12456789999999988888999999999988776644323321 245666665 6666
Q ss_pred EEEeCCCCCeEEEEeCCCCcE
Q 023864 249 WANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 249 yANvw~s~d~I~vIDp~T~~v 269 (276)
.|..-.+ ..|.+-|....+.
T Consensus 359 l~sgs~D-~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 359 LCTGSWD-KNLKIWAFSGHRK 378 (380)
T ss_dssp EEEECTT-SCEEEEECCSSSS
T ss_pred EEEeeCC-CCEEEEecCCCcc
Confidence 6666556 7888888877543
No 202
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.99 E-value=0.00061 Score=68.47 Aligned_cols=158 Identities=10% Similarity=0.025 Sum_probs=106.1
Q ss_pred ceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CC----ceEEEEEEeCCEEEEEEee-----CCEEEEEe
Q 023864 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GS----YFGEGLTLLGEKLFQVTWL-----QKTGFIYD 176 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~----~FgEGit~~g~~LyqlTwk-----~~~v~V~D 176 (276)
..|+.+. ++++|..+. +..|..+|.+||+++=+.... .. .....-++.++++|+.+.. ++.++.+|
T Consensus 114 ~~~~~~~-~g~v~v~~~---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D 189 (689)
T 1yiq_A 114 NRGVAVW-KGKVYVGVL---DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYD 189 (689)
T ss_dssp CCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEE
T ss_pred CCccEEE-CCEEEEEcc---CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEE
Confidence 3577776 589998653 578999999999998777664 11 1111335568999997763 68999999
Q ss_pred CCCCcEEEEEecC--CCC-------------------------------eeEEeeCCCEEEEECCCc-------------
Q 023864 177 QNNLNKLEEFTHQ--MKD-------------------------------GWGLATDGKVLFGSDGSS------------- 210 (276)
Q Consensus 177 ~~tlk~i~~~~~~--~~E-------------------------------GWGLT~Dg~~L~vSDGS~------------- 210 (276)
++|.+++-++... .+. ...+.++++.+|+..+..
T Consensus 190 ~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~g 269 (689)
T 1yiq_A 190 AETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKG 269 (689)
T ss_dssp TTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCS
T ss_pred CCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCC
Confidence 9999999888641 011 123455778999976543
Q ss_pred ------eEEEEcCCCCcEEEEEEeee-C-----CEeeeeeeeeEEECCE---EEEEeCCCCCeEEEEeCCCCcEE
Q 023864 211 ------MLYQIDPQTLKVIRKDIVRY-K-----GREVRNLNELEFIKGE---VWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 211 ------~L~viDp~t~~vi~~I~V~~-~-----g~pv~~lNELE~idG~---lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
.|+-+|++|++++=+..... + ......+-+++ ++|+ +.+..=.. ..+.++|++||+.+
T Consensus 270 d~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~-~~G~~~~~v~~~~~~-G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 270 DNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELP-IDGKPRKVLMQAPKN-GFFYVIDRATGELL 342 (689)
T ss_dssp CCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE-ETTEEEEEEEECCTT-SEEEEEETTTCCEE
T ss_pred CceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeec-cCCcEEEEEEEECCC-CeEEEEECCCCCEe
Confidence 49999999999987766532 1 11001222333 2664 33333345 79999999998876
No 203
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.97 E-value=8.8e-05 Score=72.38 Aligned_cols=154 Identities=11% Similarity=0.011 Sum_probs=94.0
Q ss_pred ceEEEEecCCEEEEEcCCCCCCeEEEEeCCCC---cEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEE
Q 023864 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETG---KVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg~S~I~~iDl~tg---kv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i 183 (276)
...+.|+|||+.+..+.. ..|..||++++ ++......+.....-.+..+|++|+... ++.++++|.++.+..
T Consensus 111 v~~~~~SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQM 185 (741)
T ss_dssp SCCCEECTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEE
T ss_pred cceeEECCCCCEEEEEeC---CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEE
Confidence 357899999863333331 79999999998 6533222223333333333455665554 679999999987665
Q ss_pred EEEecCC------------------CCeeEEeeCCCEEEEE--CCC-------------------------------ceE
Q 023864 184 EEFTHQM------------------KDGWGLATDGKVLFGS--DGS-------------------------------SML 212 (276)
Q Consensus 184 ~~~~~~~------------------~EGWGLT~Dg~~L~vS--DGS-------------------------------~~L 212 (276)
....... ..+..+++||++|+.+ |++ .+|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 4322211 1456789999988774 231 289
Q ss_pred EEEcCCC-CcEEEEEEee-eCCEeeeeeeeeEEECC-EEEEEeC----CCCCeEEEEeCCCCcEE
Q 023864 213 YQIDPQT-LKVIRKDIVR-YKGREVRNLNELEFIKG-EVWANVW----QVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 213 ~viDp~t-~~vi~~I~V~-~~g~pv~~lNELE~idG-~lyANvw----~s~d~I~vIDp~T~~v~ 270 (276)
+++|.++ .+... +... .... .++.+.|.|| +|++... .. ..|.++|+++++..
T Consensus 266 ~~~d~~~~~~~~~-~~~~~~~~~---~~~~~~~pDg~~l~~~~~~~~~~~-~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 266 GVISPAEQAQTQW-IDLGKEQDI---YLARVNWRDPQHLSFQRQSRDQKK-LDLVEVTLASNQQR 325 (741)
T ss_dssp EEECSSTTCCCEE-ECCCSCSSE---EEEEEEEEETTEEEEEEEETTSSE-EEEEEEETTTCCEE
T ss_pred EEEECCCCCceEE-ecCCCCcce---EEEEEEeCCCCEEEEEEecccCCe-EEEEEEECCCCceE
Confidence 9999998 77543 3322 1122 3445556555 4665443 23 57999999998754
No 204
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.97 E-value=3.1e-05 Score=68.96 Aligned_cols=168 Identities=8% Similarity=0.057 Sum_probs=106.7
Q ss_pred EEEEEecCCCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCc------EEEEe-ec-CCCceEEEEEEeC--CEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGK------VEAIN-QM-EGSYFGEGLTLLG--EKLF 163 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgk------v~~~~-~l-~~~~FgEGit~~g--~~Ly 163 (276)
.+.++.. ...-...+.|+++ +.++.+++ .+..|+.||+++++ ..... .+ +..--...+++.. +.++
T Consensus 105 ~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 105 SMARFSN-HSSSVKTVKFNAKQDNVLASGG--NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp EEEECCC-SSSCCCEEEECSSSTTBEEEEC--SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred chhhccC-CccceEEEEEcCCCCCEEEEEc--CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE
Confidence 4444432 2344569999998 67777666 67889999999986 22221 11 1111123555553 5677
Q ss_pred EEEeeCCEEEEEeCCCCcEEEEEecCC------C--CeeEEeeCCCE-EEEECCCc---eEEEEcCCCCc-EEEEEEeee
Q 023864 164 QVTWLQKTGFIYDQNNLNKLEEFTHQM------K--DGWGLATDGKV-LFGSDGSS---MLYQIDPQTLK-VIRKDIVRY 230 (276)
Q Consensus 164 qlTwk~~~v~V~D~~tlk~i~~~~~~~------~--EGWGLT~Dg~~-L~vSDGS~---~L~viDp~t~~-vi~~I~V~~ 230 (276)
+..-.++.+.+||..+.+.+.++.... . ....+++||.. |+...... .|.++|..+.+ .+..+..
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~-- 259 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQ-- 259 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCS--
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeec--
Confidence 777889999999999999999887531 1 22346678754 44433344 99999999863 3333220
Q ss_pred CCEeeeeeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 231 KGREVRNLNELEFI--KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 231 ~g~pv~~lNELE~i--dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
++. ..++.+.+. +|.+++..-.+ ..|.+.|.++++.+
T Consensus 260 -~~~-~~v~~~~~s~~~~~~l~s~~~d-g~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 260 -GHQ-KGILSLDWCHQDEHLLLSSGRD-NTVLLWNPESAEQL 298 (416)
T ss_dssp -CCS-SCEEEEEECSSCSSCEEEEESS-SEEEEECSSSCCEE
T ss_pred -Ccc-CceeEEEeCCCCCCeEEEEeCC-CCEEEeeCCCCccc
Confidence 111 245566675 56666666566 89999999997654
No 205
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.97 E-value=0.00013 Score=68.83 Aligned_cols=155 Identities=13% Similarity=0.199 Sum_probs=101.8
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCC---------------CCCeEEEEeCCCCcEEEEeecCCCceEEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLY---------------GRSSVRRVALETGKVEAINQMEGSYFGEGLT 156 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~y---------------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit 156 (276)
..+.+.++.+.+-.+...+.++++|.+|.++..| ....|.++|+.+-++ -++.-.|+-||+
T Consensus 152 ~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~----~~~~l~~pNGia 227 (355)
T 3sre_A 152 SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRV----VAEGFDFANGIN 227 (355)
T ss_dssp EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEE----EEEEESSEEEEE
T ss_pred EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEE----eecCCcccCcce
Confidence 3567888888777778999999999999987654 235788898842222 133345788999
Q ss_pred Ee--CCEEEEEEeeCCEEEEEeCC---CCcEEEEEecC-CCCeeEEeeCCCEEEEEC--CCceEEEEcCCC--CcEEEEE
Q 023864 157 LL--GEKLFQVTWLQKTGFIYDQN---NLNKLEEFTHQ-MKDGWGLATDGKVLFGSD--GSSMLYQIDPQT--LKVIRKD 226 (276)
Q Consensus 157 ~~--g~~LyqlTwk~~~v~V~D~~---tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSD--GS~~L~viDp~t--~~vi~~I 226 (276)
+. ++.||+..-..+++.+||.+ ++...+.|..+ .|+|..+..+...||++. +..+|..+||+. .+.+.+|
T Consensus 228 ~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI 307 (355)
T 3sre_A 228 ISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRI 307 (355)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEE
Confidence 86 46899999999999999964 34445566544 345555555324688855 445666667763 4445555
Q ss_pred Ee------------eeCCEeeeeeeeeEEECCEEEE
Q 023864 227 IV------------RYKGREVRNLNELEFIKGEVWA 250 (276)
Q Consensus 227 ~V------------~~~g~pv~~lNELE~idG~lyA 250 (276)
.. .++|+.+....+....+|+||.
T Consensus 308 ~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~i 343 (355)
T 3sre_A 308 QDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLI 343 (355)
T ss_dssp ECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEE
T ss_pred EccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEE
Confidence 42 2355555555555555666664
No 206
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.96 E-value=0.0007 Score=69.99 Aligned_cols=157 Identities=10% Similarity=0.032 Sum_probs=108.0
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCcE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNK 182 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk~ 182 (276)
..-+.++.|++||+++.++| .+..|+.||..+++.+....-... --..+++.. +++.+..-.++.+.+||..+.+.
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~--~d~~i~vw~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCG--ADKTLQVFKAETGEKLLDIKAHED-EVLCCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cccEEEEEECCCCCEEEEEe--CCCeEEEEECCCCCEEEEeccCCC-CEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 34457999999998887777 677899999999998777653322 224556653 34444555789999999999999
Q ss_pred EEEEecCCCCeeE--EeeCCC--EEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCC
Q 023864 183 LEEFTHQMKDGWG--LATDGK--VLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWP 257 (276)
Q Consensus 183 i~~~~~~~~EGWG--LT~Dg~--~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d 257 (276)
+.++......=+. ++++++ .++....+..|.++|..+.+.+.++.-.. ..++-+.+. +|...|..-.+ .
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~l~s~s~d-g 765 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT-----NSVNHCRFSPDDELLASCSAD-G 765 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS-----SCEEEEEECSSTTEEEEEESS-S
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC-----CCEEEEEEecCCCEEEEEECC-C
Confidence 9999743222233 455433 44444457789999999998876654322 234455555 56666666566 8
Q ss_pred eEEEEeCCCCcE
Q 023864 258 CIPYAYLQAFGS 269 (276)
Q Consensus 258 ~I~vIDp~T~~v 269 (276)
.|.+.|..+++.
T Consensus 766 ~v~vwd~~~~~~ 777 (1249)
T 3sfz_A 766 TLRLWDVRSANE 777 (1249)
T ss_dssp EEEEEEGGGTEE
T ss_pred eEEEEeCCCCcc
Confidence 899999988654
No 207
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.96 E-value=0.0019 Score=55.39 Aligned_cols=155 Identities=9% Similarity=-0.035 Sum_probs=102.9
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--C-CEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--G-EKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g-~~LyqlTwk~~~v~V~D~~tl 180 (276)
........+.+++.++.+++ .+..++.||............+..-....+++. + +.+++..-.++.+.++|..+.
T Consensus 128 ~~~~~~~~~~~~~~~l~s~s--~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~ 205 (340)
T 4aow_A 128 TKDVLSVAFSSDNRQIVSGS--RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 205 (340)
T ss_dssp SSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT
T ss_pred CCceeEEEEeecCccceeec--CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC
Confidence 44446777787777666666 677899999987755433333322223344443 2 355666667899999999999
Q ss_pred cEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECC-EEEEEeCCCCC
Q 023864 181 NKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKG-EVWANVWQVWP 257 (276)
Q Consensus 181 k~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG-~lyANvw~s~d 257 (276)
+.+.++.-... ....+++||+.|+....+..|.++|..+.+.+..+.... .++.+.+..+ ++.+.. .. +
T Consensus 206 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~-~d-~ 277 (340)
T 4aow_A 206 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD------IINALCFSPNRYWLCAA-TG-P 277 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS------CEEEEEECSSSSEEEEE-ET-T
T ss_pred ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc------eEEeeecCCCCceeecc-CC-C
Confidence 99888853211 233467899998887778899999999999887776543 3445555544 444333 45 7
Q ss_pred eEEEEeCCCCc
Q 023864 258 CIPYAYLQAFG 268 (276)
Q Consensus 258 ~I~vIDp~T~~ 268 (276)
.|.+.|.+++.
T Consensus 278 ~i~iwd~~~~~ 288 (340)
T 4aow_A 278 SIKIWDLEGKI 288 (340)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCe
Confidence 88888887743
No 208
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.95 E-value=0.00039 Score=61.63 Aligned_cols=149 Identities=14% Similarity=0.095 Sum_probs=95.1
Q ss_pred EEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC-ceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEEEEEe
Q 023864 110 LLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFT 187 (276)
Q Consensus 110 L~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~-~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~ 187 (276)
..|+|||+ |+.++..-|...|..+|+++|+.......+.. .++.-+..++++|+... .++.++++|.++.+....+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE-TTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe-CCCeEEEEECCCCcceeeee
Confidence 67899986 44333323667899999999987665543332 22333455567777766 35799999999998776665
Q ss_pred cCCCCe------eEEeeCCCEEEEE----------------------CCCceEEEEcCCCCcEEEEEEeeeCCEeeeeee
Q 023864 188 HQMKDG------WGLATDGKVLFGS----------------------DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLN 239 (276)
Q Consensus 188 ~~~~EG------WGLT~Dg~~L~vS----------------------DGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lN 239 (276)
.+ ++ |.+.+||+.++.. +....|+++|+++.+......-. ..++
T Consensus 120 ~~--~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------~~~~ 191 (388)
T 3pe7_A 120 VP--AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN------QWLG 191 (388)
T ss_dssp CC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES------SCEE
T ss_pred ch--hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC------cccc
Confidence 44 33 3457888887632 23478999999998764332211 1344
Q ss_pred eeEEE--CCE--EEEEeCC----CCCeEEEEeCCCCc
Q 023864 240 ELEFI--KGE--VWANVWQ----VWPCIPYAYLQAFG 268 (276)
Q Consensus 240 ELE~i--dG~--lyANvw~----s~d~I~vIDp~T~~ 268 (276)
.+.+. ||+ +|+.... . ..|.++|+++++
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~-~~l~~~d~~~~~ 227 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVD-ARMWLINEDGTN 227 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSS-CSEEEEETTSCC
T ss_pred ccEECCCCCCEEEEEEecCCCCCc-ceEEEEeCCCCc
Confidence 55565 354 3455432 3 589999987754
No 209
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.95 E-value=0.00046 Score=66.93 Aligned_cols=158 Identities=13% Similarity=0.037 Sum_probs=108.8
Q ss_pred CCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tlk 181 (276)
...+..+.|+|++. ++.+++ .+..|+.||.++++...... +..-.-..+++.. ++++...-.++++.+||..+.+
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s--~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGS--DDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEE--TTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCceEEEECCCCCeEEEEEe--CCCeEEEEECCCCeEeeeec-cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc
Confidence 44567899999875 566666 78899999999998766543 2222344666653 4566666788999999999999
Q ss_pred EEEEEec------CC-C--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEe
Q 023864 182 KLEEFTH------QM-K--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANV 252 (276)
Q Consensus 182 ~i~~~~~------~~-~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANv 252 (276)
.+.++.. .. . .+..+++||+.|.....+.+|.++|.++++.++++..+..- -.....+.+ ++...+..
T Consensus 224 ~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~l~s~ 300 (611)
T 1nr0_A 224 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI--EDQQLGIIW-TKQALVSI 300 (611)
T ss_dssp EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG--GGCEEEEEE-CSSCEEEE
T ss_pred EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc--cceeEEEEE-cCCEEEEE
Confidence 9888732 11 1 23446789999888767889999999999999888764210 001112223 55555556
Q ss_pred CCCCCeEEEEeCCCCc
Q 023864 253 WQVWPCIPYAYLQAFG 268 (276)
Q Consensus 253 w~s~d~I~vIDp~T~~ 268 (276)
... ..|.+.|+++++
T Consensus 301 s~d-~~i~~~~~~~~~ 315 (611)
T 1nr0_A 301 SAN-GFINFVNPELGS 315 (611)
T ss_dssp ETT-CCEEEEETTTTE
T ss_pred eCC-CcEEEEeCCCCC
Confidence 566 788888887754
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.95 E-value=0.00049 Score=69.15 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=61.8
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCee--EEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeC--CEeeeeeeeeEE-E
Q 023864 170 KTGFIYDQNNLNKLEEFTHQMKDGW--GLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--GREVRNLNELEF-I 244 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~~EGW--GLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~--g~pv~~lNELE~-i 244 (276)
+.+..+|++|.|++-+++.+. ..| .++..|..+|+...+..|+.+|.+|++++-+..+... +.|+. | .
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~t------y~~ 527 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVT------YSV 527 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE------EEE
T ss_pred eeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceE------EEE
Confidence 678899999999999998762 233 4888999999988899999999999999988887643 34544 4 6
Q ss_pred CCEEEEEe
Q 023864 245 KGEVWANV 252 (276)
Q Consensus 245 dG~lyANv 252 (276)
||+.|+.+
T Consensus 528 ~G~qyv~~ 535 (689)
T 1yiq_A 528 DGEQYVTF 535 (689)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEE
Confidence 99999776
No 211
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.95 E-value=0.00036 Score=57.99 Aligned_cols=155 Identities=10% Similarity=0.013 Sum_probs=90.6
Q ss_pred CCceEEEEecCCEEEEEcC--CCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEE--EeCC
Q 023864 105 AFTQGLLYAENDTLFESTG--LYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFI--YDQN 178 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG--~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V--~D~~ 178 (276)
.....+.|++||+.+..++ .-+...|..+|+++++. ..+..... ...+++. ++.|+.....++.+.+ +|..
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLP--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSS--EEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCC--ccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 4456899999986444333 22567899999988874 33333333 3344554 5677777777785555 4566
Q ss_pred CCcEEEEEecC-CCCeeEEeeCCCEEEEE---CCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEe
Q 023864 179 NLNKLEEFTHQ-MKDGWGLATDGKVLFGS---DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANV 252 (276)
Q Consensus 179 tlk~i~~~~~~-~~EGWGLT~Dg~~L~vS---DGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANv 252 (276)
+.+...-...+ ......+++||+.|+++ |+...|+.+|+.+.++. .+ ..... ....+.+. || +|++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~-~~--~~~~~---~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 162 SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE-RI--TDSAY---GDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE-EC--CCCSE---EEEEEEECTTSSEEEEEE
T ss_pred CCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE-EE--ecCCc---ccCCeEECCCCCEEEEEE
Confidence 65543222221 12334567899988764 46788888887765542 22 22122 23344554 55 454333
Q ss_pred C----------CCCCeEEEEeCCCCcE
Q 023864 253 W----------QVWPCIPYAYLQAFGS 269 (276)
Q Consensus 253 w----------~s~d~I~vIDp~T~~v 269 (276)
. .. ..|.++|.++++.
T Consensus 236 ~~~~~~~~~~~~~-~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 236 YDADVFDHPRDLD-VRVQLMDMDGGNV 261 (297)
T ss_dssp EETTCCSCCSSEE-EEEEEEETTSCSC
T ss_pred cCCCCCcccccCc-eEEEEEecCCCCc
Confidence 2 22 4699999998764
No 212
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.93 E-value=0.0015 Score=59.53 Aligned_cols=170 Identities=11% Similarity=0.054 Sum_probs=112.9
Q ss_pred ceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC-ceEEEEEEeC-CEEEEEE
Q 023864 89 SIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLG-EKLFQVT 166 (276)
Q Consensus 89 ~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~-~FgEGit~~g-~~LyqlT 166 (276)
+...++|++.--.-...|..=|.+++++.|- .|+ ++.|+.||.+||++.....+..+ ..-..+++.. +++...-
T Consensus 90 ~~~p~~~l~ap~~~~d~y~~~l~wS~~n~lA--vgl--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasg 165 (420)
T 4gga_A 90 PSLPDRILDAPEIRNDYYLNLVDWSSGNVLA--VAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVG 165 (420)
T ss_dssp CSSCSEEEECTTCCCCTTCBCEEECTTSEEE--EEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCceEEECCCCcccccceeEEECCCCEEE--EEe--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEE
Confidence 3345667654222234456778898766554 453 57999999999999888777643 2345666653 4555556
Q ss_pred eeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcE-EEEEEeeeCCEeeeeeeeeEEE-
Q 023864 167 WLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV-IRKDIVRYKGREVRNLNELEFI- 244 (276)
Q Consensus 167 wk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~v-i~~I~V~~~g~pv~~lNELE~i- 244 (276)
-.++.+.+||.++.+.+.++.-....-..++.|++.|.....+..+.++|..+... +.++.-.. . ...-+.+.
T Consensus 166 s~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~--~---~~~~~~~~~ 240 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS--Q---EVCGLRWAP 240 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS--S---CEEEEEECT
T ss_pred ECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccc--c---ceeeeeecC
Confidence 67899999999999999988643345566899999888877888999999776443 33333221 1 12223333
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 245 KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 245 dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
+|...+....+ +.|.+.|..+++
T Consensus 241 ~g~~l~s~~~D-~~v~i~~~~~~~ 263 (420)
T 4gga_A 241 DGRHLASGGND-NLVNVWPSAPGE 263 (420)
T ss_dssp TSSEEEEEETT-SCEEEEESSCCS
T ss_pred CCCeeeeeecc-ccceEEeecccc
Confidence 55556666566 788888877654
No 213
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.93 E-value=0.0017 Score=57.61 Aligned_cols=156 Identities=7% Similarity=-0.014 Sum_probs=101.5
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tl 180 (276)
..-...+.|++ ++.++.+++ .+..|+.||+++..+........ ......+++.. ++.+...-.++.+.+||. +.
T Consensus 118 ~~~v~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~ 194 (383)
T 3ei3_B 118 GDAITGMKFNQFNTNQLFVSS--IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DG 194 (383)
T ss_dssp TCBEEEEEEETTEEEEEEEEE--TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TS
T ss_pred CCceeEEEeCCCCCCEEEEEe--CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CC
Confidence 45567999999 567766666 67899999999754433222221 12234556553 455556667899999998 56
Q ss_pred cEEEEEecCCC--CeeEEeeCCC-EEEEECCCceEEEEcCCC----CcEEEEEEeeeCCEeeeeeeeeEEE--CCEEEEE
Q 023864 181 NKLEEFTHQMK--DGWGLATDGK-VLFGSDGSSMLYQIDPQT----LKVIRKDIVRYKGREVRNLNELEFI--KGEVWAN 251 (276)
Q Consensus 181 k~i~~~~~~~~--EGWGLT~Dg~-~L~vSDGS~~L~viDp~t----~~vi~~I~V~~~g~pv~~lNELE~i--dG~lyAN 251 (276)
+.+.++..... ....++++++ .|+....+..|.++|..+ .+.+..+.- . ..++.+.+. +|...+.
T Consensus 195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~---~---~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH---E---KPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC---S---SCEEEEEECTTTSCEEEE
T ss_pred CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC---C---CceEEEEEcCCCCCEEEE
Confidence 77777763212 2334678888 555555678999999988 555555531 1 245556675 5665555
Q ss_pred eCCCCCeEEEEeCCCCcE
Q 023864 252 VWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 252 vw~s~d~I~vIDp~T~~v 269 (276)
.-.+ +.|.+.|.++++.
T Consensus 269 ~~~d-~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 269 TDQR-NEIRVYSSYDWSK 285 (383)
T ss_dssp EESS-SEEEEEETTBTTS
T ss_pred EcCC-CcEEEEECCCCcc
Confidence 5566 8999999988653
No 214
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.92 E-value=0.00044 Score=67.15 Aligned_cols=136 Identities=16% Similarity=0.132 Sum_probs=84.1
Q ss_pred CCCeEEEEeCCCCcEEEEeec-CCCceEEEEEEe--CCEEEEEEeeC----CEEEEEeCCCCcEEEEEecCCC-------
Q 023864 126 GRSSVRRVALETGKVEAINQM-EGSYFGEGLTLL--GEKLFQVTWLQ----KTGFIYDQNNLNKLEEFTHQMK------- 191 (276)
Q Consensus 126 g~S~I~~iDl~tgkv~~~~~l-~~~~FgEGit~~--g~~LyqlTwk~----~~v~V~D~~tlk~i~~~~~~~~------- 191 (276)
+...|.+||+++++....... +...+...+++. ++.|+...... ..++++|.++.+....+..+..
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 457899999999986543322 223344556664 45676655433 3899999999854444431111
Q ss_pred CeeEEee--CCCEEEEEC--CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeee-eEEE-CC-EEEEEeCCCCC----eEE
Q 023864 192 DGWGLAT--DGKVLFGSD--GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNE-LEFI-KG-EVWANVWQVWP----CIP 260 (276)
Q Consensus 192 EGWGLT~--Dg~~L~vSD--GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNE-LE~i-dG-~lyANvw~s~d----~I~ 260 (276)
.+..+++ ||+.|++++ |..+|+.+|.. .+.++.+.-+ ..++ .. +.+. || .||+..... + .|.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~-~~~~~~l~~~--~~~v---~~~~~~spdg~~l~~~~~~~-~~~~~~l~ 385 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT-GRLIRQVTKG--EWEV---TNFAGFDPKGTRLYFESTEA-SPLERHFY 385 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETT-SCEEEECCCS--SSCE---EEEEEECTTSSEEEEEESSS-CTTCBEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECC-CCEEEecCCC--CeEE---EeeeEEcCCCCEEEEEecCC-CCceEEEE
Confidence 2346888 999999875 67789999854 4444444322 1122 22 3343 44 677666555 4 899
Q ss_pred EEeCCCCc
Q 023864 261 YAYLQAFG 268 (276)
Q Consensus 261 vIDp~T~~ 268 (276)
++|.++++
T Consensus 386 ~~d~~~~~ 393 (706)
T 2z3z_A 386 CIDIKGGK 393 (706)
T ss_dssp EEETTCCC
T ss_pred EEEcCCCC
Confidence 99998865
No 215
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.90 E-value=0.0025 Score=57.78 Aligned_cols=164 Identities=11% Similarity=0.070 Sum_probs=105.3
Q ss_pred eEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEe--CCEEEEEEeeC
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL--GEKLFQVTWLQ 169 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~--g~~LyqlTwk~ 169 (276)
.+.+.++.|... +..+.|+|||+++.+++ .+.+.+|+..+++.+...... ....-..+++. +..+.......
T Consensus 167 ~~~~~~~~~~~~--V~~v~fspdg~~l~s~s---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 167 LTEKFEIETRGE--VKDLHFSTDGKVVAYIT---GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp TEEEEEEECSSC--CCEEEECTTSSEEEEEC---SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEeCCCCc--eEEEEEccCCceEEecc---ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 455667777443 56999999998776544 567889999998876554333 33333345554 33444444433
Q ss_pred C---EEEEEeCCCCcEE----EEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeee
Q 023864 170 K---TGFIYDQNNLNKL----EEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNE 240 (276)
Q Consensus 170 ~---~v~V~D~~tlk~i----~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNE 240 (276)
+ .+..+|..+.+.. ..+.-... ....++|||+.|.....+..|.++|.++++.++++.- |+. ..++-
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~---gH~-~~V~~ 317 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQ---AHS-FAITE 317 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETT---SSS-SCEEE
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecC---ccc-CCEEE
Confidence 3 5666776555432 22321111 1234679999998876678899999999998776532 221 13455
Q ss_pred eEEE-CCEEEEEeCCCCCeEEEEeCCC
Q 023864 241 LEFI-KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 241 LE~i-dG~lyANvw~s~d~I~vIDp~T 266 (276)
+.|. ||+..|..-.+ +.|-+.|..+
T Consensus 318 v~fSpdg~~laS~S~D-~tvrvw~ip~ 343 (365)
T 4h5i_A 318 VTISPDSTYVASVSAA-NTIHIIKLPL 343 (365)
T ss_dssp EEECTTSCEEEEEETT-SEEEEEECCT
T ss_pred EEECCCCCEEEEEeCC-CeEEEEEcCC
Confidence 6676 78888888777 9999999654
No 216
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.90 E-value=0.00011 Score=73.59 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=84.3
Q ss_pred EEeCCEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCC-----------eeEEeeCCCEEEEECCCceEEEEcCCCCcEEE
Q 023864 156 TLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD-----------GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIR 224 (276)
Q Consensus 156 t~~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~E-----------GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~ 224 (276)
.+.+++||+.+. ++.++.+|++|.+++-+++...+. .-|++.+++.+|+...+.+|+.+|++|++++=
T Consensus 63 ~v~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 63 LFHDGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp EEETTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEE
T ss_pred EEECCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEee
Confidence 467999999986 578999999999999998754211 13456678899998888899999999999998
Q ss_pred EEEeeeCCEeeeeeeeeEEECCEEEEEeCC-----CCCeEEEEeCCCCcEEE
Q 023864 225 KDIVRYKGREVRNLNELEFIKGEVWANVWQ-----VWPCIPYAYLQAFGSSL 271 (276)
Q Consensus 225 ~I~V~~~g~pv~~lNELE~idG~lyANvw~-----s~d~I~vIDp~T~~v~l 271 (276)
+..+.+..........-.+.+|.||+.... . ..|..+|++||+++=
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~-g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVR-GFVSAYDADTGKLAW 192 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCB-CEEEEEETTTCCEEE
T ss_pred eeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCC-CEEEEEECCCCcEEE
Confidence 777643111111111123568999998765 4 689999999988753
No 217
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.89 E-value=0.00077 Score=69.72 Aligned_cols=170 Identities=9% Similarity=0.010 Sum_probs=115.3
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--C-EEEEEEeeCC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--E-KLFQVTWLQK 170 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~-~LyqlTwk~~ 170 (276)
+.+.++.. ....+..+.|++||.++.+++ .+..|++||+.+|+.+....-.... -..+++.. + .+....-.++
T Consensus 648 ~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 648 EKLLDIKA-HEDEVLCCAFSSDDSYIATCS--ADKKVKIWDSATGKLVHTYDEHSEQ-VNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp CEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSC-EEEEEECSSSSCCEEEEEETTS
T ss_pred CEEEEecc-CCCCEEEEEEecCCCEEEEEe--CCCeEEEEECCCCceEEEEcCCCCc-EEEEEEecCCCceEEEEEeCCC
Confidence 45556652 355668999999998777776 6788999999999988876544322 23455543 3 4555556788
Q ss_pred EEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCE----ee----eeeee
Q 023864 171 TGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGR----EV----RNLNE 240 (276)
Q Consensus 171 ~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~----pv----~~lNE 240 (276)
.+.+||..+.+.+.++.-... ....+++||+.|+....+..|.++|..+.+....+.+...-. +. ..+.-
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 999999999999888863211 233467899999888778899999999999888887643110 00 01111
Q ss_pred eEEE-CCE-EEEEeCCCCCeEEEEeCCCCcEE
Q 023864 241 LEFI-KGE-VWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 241 LE~i-dG~-lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+.+. ||. +.+.. . +.|.+.|..+++..
T Consensus 804 ~~~s~dg~~l~~~~--~-~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 804 CSWSADGDKIIVAA--K-NKVLLFDIHTSGLL 832 (1249)
T ss_dssp CCBCTTSSEEEEEE--T-TEEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEc--C-CcEEEEEecCCCce
Confidence 2222 454 44433 5 88999999987654
No 218
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.0015 Score=56.61 Aligned_cols=172 Identities=9% Similarity=-0.030 Sum_probs=107.3
Q ss_pred eeEEEEEEecCCCCCceEEEEecC--CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEeC---CEEEEE
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAEN--DTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG---EKLFQV 165 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~d--g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~g---~~Lyql 165 (276)
+.+.+.++.. ...-...+.|+++ +.++.+++ .+..|+.||+++++......+. ...--..+++.. +.++..
T Consensus 44 ~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 120 (379)
T 3jrp_A 44 THKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV 120 (379)
T ss_dssp EEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred cceeeeEecC-CCCcEEEEEeCCCCCCCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE
Confidence 3355666642 2445579999866 77776666 5778999999999743333332 122234566653 456666
Q ss_pred EeeCCEEEEEeCCCCcEEEEEecC--CCC--eeEEee-------------CCCEEEEECCCceEEEEcCCCCcEEEEEEe
Q 023864 166 TWLQKTGFIYDQNNLNKLEEFTHQ--MKD--GWGLAT-------------DGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (276)
Q Consensus 166 Twk~~~v~V~D~~tlk~i~~~~~~--~~E--GWGLT~-------------Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V 228 (276)
.-.++.+.+||..+.+....+... ... ...+.+ |++.|+....+..|.++|..+.+....+..
T Consensus 121 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 121 ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE
T ss_pred ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE
Confidence 778999999999887544333221 111 222445 688888877778899999887654433332
Q ss_pred eeCCEeeeeeeeeEEE-C---CEEEEEeCCCCCeEEEEeCCCCc
Q 023864 229 RYKGREVRNLNELEFI-K---GEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 229 ~~~g~pv~~lNELE~i-d---G~lyANvw~s~d~I~vIDp~T~~ 268 (276)
...++. ..++-+.+. + |.+.|..-.+ ..|.+.|..+++
T Consensus 201 ~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~d-g~i~iwd~~~~~ 242 (379)
T 3jrp_A 201 TLEGHS-DWVRDVAWSPTVLLRSYLASVSQD-RTCIIWTQDNEQ 242 (379)
T ss_dssp EECCCS-SCEEEEEECCCCSSSEEEEEEETT-SCEEEEEESSTT
T ss_pred EEeccc-CcEeEEEECCCCCCCCeEEEEeCC-CEEEEEeCCCCC
Confidence 222221 234555666 3 6777777667 889999988863
No 219
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.89 E-value=0.00058 Score=57.77 Aligned_cols=117 Identities=10% Similarity=0.096 Sum_probs=78.7
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc----EEEEeecCCCceEEEEEEeC---CEEEEEEeeCCEEEEEe
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK----VEAINQMEGSYFGEGLTLLG---EKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk----v~~~~~l~~~~FgEGit~~g---~~LyqlTwk~~~v~V~D 176 (276)
..-+..+.|++|+.++.+++ .+..|+.||+.++. ......-. .---..+++.. ++++...-.++.+.+||
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAH-DSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECC-SSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccceeEEEEcCCCCEEEEee--CCCeEEEEECCCCCCcceecceeccC-CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 45568999999988777666 67789999999763 33333212 22234566643 55566666789999999
Q ss_pred CCCC---------cEEEEEecCCCC--eeEEeeC--CCEEEEECCCceEEEEcCCCCcEE
Q 023864 177 QNNL---------NKLEEFTHQMKD--GWGLATD--GKVLFGSDGSSMLYQIDPQTLKVI 223 (276)
Q Consensus 177 ~~tl---------k~i~~~~~~~~E--GWGLT~D--g~~L~vSDGS~~L~viDp~t~~vi 223 (276)
..+. +.+.++...... ...+.++ ++.|+....+..|.++|..+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCT
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHh
Confidence 9876 445555422122 2335677 888888777889999998876643
No 220
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.88 E-value=0.00041 Score=66.15 Aligned_cols=155 Identities=8% Similarity=-0.094 Sum_probs=95.9
Q ss_pred CCceEEEEecCCEEEEEcCCCCC--CeEEEEeC--CCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCC
Q 023864 105 AFTQGLLYAENDTLFESTGLYGR--SSVRRVAL--ETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~--S~I~~iDl--~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tl 180 (276)
.....+.|+||..+|.+...-|. ..|..+|+ +.+.. ...-....-...++.+++.++.++-..+...+||.++.
T Consensus 65 ~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g 142 (582)
T 3o4h_A 65 NSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ--RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGG 142 (582)
T ss_dssp SEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE--ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc--cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCC
Confidence 45568889988335544321133 36667777 44433 22222233344777788877777777777779999888
Q ss_pred cEEEEEecCCCCeeEEeeCCCEEEE-EC-C--CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCE-EEEEeCC
Q 023864 181 NKLEEFTHQMKDGWGLATDGKVLFG-SD-G--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGE-VWANVWQ 254 (276)
Q Consensus 181 k~i~~~~~~~~EGWGLT~Dg~~L~v-SD-G--S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~-lyANvw~ 254 (276)
+...-...+ ...+.++|||+.|+. ++ + ...|+++|+++.+.. ++ ..... ..+...|. ||+ |+.+. .
T Consensus 143 ~~~~l~~~~-~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l--~~~~~---~~~~~~~SpDG~~l~~~~-~ 214 (582)
T 3o4h_A 143 GLRELARLP-GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VF--DSGEG---SFSSASISPGMKVTAGLE-T 214 (582)
T ss_dssp EEEEEEEES-SCEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EE--CCSSC---EEEEEEECTTSCEEEEEE-C
T ss_pred cEEEeecCC-CceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Ee--ecCCC---ccccceECCCCCEEEEcc-C
Confidence 765444443 245557899999874 43 2 367999999998865 33 22212 23555666 675 55333 3
Q ss_pred CCC--eEEEEeCCCCcEE
Q 023864 255 VWP--CIPYAYLQAFGSS 270 (276)
Q Consensus 255 s~d--~I~vIDp~T~~v~ 270 (276)
. . .|.++|+++++..
T Consensus 215 ~-~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 215 A-REARLVTVDPRDGSVE 231 (582)
T ss_dssp S-SCEEEEEECTTTCCEE
T ss_pred C-CeeEEEEEcCCCCcEE
Confidence 3 4 8999999998765
No 221
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.88 E-value=0.00013 Score=63.07 Aligned_cols=152 Identities=9% Similarity=0.039 Sum_probs=97.2
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc----EEEEeecCCCceEEEEEEeCC-EEEEEEeeCCEEEEEeC-
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK----VEAINQMEGSYFGEGLTLLGE-KLFQVTWLQKTGFIYDQ- 177 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk----v~~~~~l~~~~FgEGit~~g~-~LyqlTwk~~~v~V~D~- 177 (276)
..-+..+.|++++.++.+++ .+..|+.||+++++ +............--+...+. .|+ ..-.++.+.+||.
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY-VGTVQGEILKVDLI 87 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEE-EEETTSCEEEECSS
T ss_pred CCcEEEEEEcCCCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEE-EEcCCCeEEEEEec
Confidence 44567999999987666666 67899999999887 544443344444333333344 444 4447899999999
Q ss_pred CCCcEEEEEec--CCCC--eeEEeeCCCEEEEECCCceEEEEcCCC---------CcEEEEEEeeeCCEeeeeeeeeEEE
Q 023864 178 NNLNKLEEFTH--QMKD--GWGLATDGKVLFGSDGSSMLYQIDPQT---------LKVIRKDIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 178 ~tlk~i~~~~~--~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t---------~~vi~~I~V~~~g~pv~~lNELE~i 244 (276)
.+.+. .++.. .... ...+.+ ++.|+.+.....|.++|..+ .+.+.++.. . ..+..+.+.
T Consensus 88 ~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~---~~v~~~~~~ 159 (342)
T 1yfq_A 88 GSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV---K---NKIFTMDTN 159 (342)
T ss_dssp SSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS---C---CCEEEEEEC
T ss_pred cCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEee---C---CceEEEEec
Confidence 87765 44432 1112 233456 88888877888999999887 444333321 1 245566677
Q ss_pred CCEEEEEeCCCCCeEEEEeCCC-Cc
Q 023864 245 KGEVWANVWQVWPCIPYAYLQA-FG 268 (276)
Q Consensus 245 dG~lyANvw~s~d~I~vIDp~T-~~ 268 (276)
.+.+++.. .. ..|.+.|.++ +.
T Consensus 160 ~~~l~~~~-~d-~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 160 SSRLIVGM-NN-SQVQWFRLPLCED 182 (342)
T ss_dssp SSEEEEEE-ST-TEEEEEESSCCTT
T ss_pred CCcEEEEe-CC-CeEEEEECCcccc
Confidence 66655543 45 6899999887 54
No 222
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.87 E-value=0.0016 Score=57.04 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=102.2
Q ss_pred EEEEecCCEEEEEcCCCCC---CeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEee-------CCEEEEEeCC
Q 023864 109 GLLYAENDTLFESTGLYGR---SSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL-------QKTGFIYDQN 178 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg~---S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk-------~~~v~V~D~~ 178 (276)
+.+.. +++||.-.|..+. +.+.+||+++++-....++|....+-+++..+++||++--. .+.+.+||+.
T Consensus 103 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~ 181 (302)
T 2xn4_A 103 GAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNAT 181 (302)
T ss_dssp EEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETT
T ss_pred EEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCC
Confidence 56665 5899987764332 57889999999877766777666666788889999998532 4679999998
Q ss_pred CCcE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEE
Q 023864 179 NLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWA 250 (276)
Q Consensus 179 tlk~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyA 250 (276)
+.+- +...+.+ ..+.+++..++.||+--| .+.++.+|+++.+-...-... ..+. . --+...+|+||+
T Consensus 182 ~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~--~-~~~~~~~~~i~v 256 (302)
T 2xn4_A 182 TNEWTYIAEMSTR-RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN-MCRR--N-AGVCAVNGLLYV 256 (302)
T ss_dssp TTEEEEECCCSSC-CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-SCCB--S-CEEEEETTEEEE
T ss_pred CCcEEECCCCccc-cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-Cccc--c-CeEEEECCEEEE
Confidence 7654 3334443 355566666677887654 468999999998665321111 1111 1 124466888886
Q ss_pred EeCC-----CCCeEEEEeCCCCc
Q 023864 251 NVWQ-----VWPCIPYAYLQAFG 268 (276)
Q Consensus 251 Nvw~-----s~d~I~vIDp~T~~ 268 (276)
-=.. . +.|.+.||++++
T Consensus 257 ~GG~~~~~~~-~~v~~yd~~~~~ 278 (302)
T 2xn4_A 257 VGGDDGSCNL-ASVEYYNPTTDK 278 (302)
T ss_dssp ECCBCSSSBC-CCEEEEETTTTE
T ss_pred ECCcCCCccc-ccEEEEcCCCCe
Confidence 5322 3 569999999865
No 223
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.87 E-value=0.00037 Score=61.75 Aligned_cols=161 Identities=13% Similarity=0.108 Sum_probs=92.3
Q ss_pred CCceEEEEec-CCE-E-EEEcCCC--CCCeEEEEeCCCCcEEEEeecCCCceEEEEEE--eCCEEEEEEeeCC----EEE
Q 023864 105 AFTQGLLYAE-NDT-L-FESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQK----TGF 173 (276)
Q Consensus 105 aFTQGL~~~~-dg~-L-yeStG~y--g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~--~g~~LyqlTwk~~----~v~ 173 (276)
.+...+.|+| ||+ | |.+.+.. +...|..+|++++++..-..-.........++ +|++|+.+...++ .++
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEE
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEE
Confidence 3457899999 875 3 4444311 25689999998876543322221122223444 4567866666543 399
Q ss_pred EEeCCCCcE--EEEEec-----CCCCeeEEeeCCCEEEEE---------CCCceEEEEcCCCCcEEEEEEeeeCCEe---
Q 023864 174 IYDQNNLNK--LEEFTH-----QMKDGWGLATDGKVLFGS---------DGSSMLYQIDPQTLKVIRKDIVRYKGRE--- 234 (276)
Q Consensus 174 V~D~~tlk~--i~~~~~-----~~~EGWGLT~Dg~~L~vS---------DGS~~L~viDp~t~~vi~~I~V~~~g~p--- 234 (276)
++|.++.+. +..++. ....|..+++||+.|+++ ++...|+++|+++.++. .+.-...+-.
T Consensus 268 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~ 346 (388)
T 3pe7_A 268 SADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFE 346 (388)
T ss_dssp EECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE-EEEECCCCCCCBT
T ss_pred EEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE-EeccccCcccccc
Confidence 999998874 333331 013555789999988764 56789999999997653 3333221000
Q ss_pred ---eeeeeeeEEE-CC-EEE-EEeCCCCCeEEEEeCCC
Q 023864 235 ---VRNLNELEFI-KG-EVW-ANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 235 ---v~~lNELE~i-dG-~ly-ANvw~s~d~I~vIDp~T 266 (276)
........+. || +|+ +..-.....|.++|..+
T Consensus 347 ~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 347 GDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred cccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 0012334454 56 454 44322226788888775
No 224
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.87 E-value=0.0022 Score=55.97 Aligned_cols=154 Identities=15% Similarity=0.118 Sum_probs=102.3
Q ss_pred EEEEecCCEEEEEcCCCC---CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEee-----CCEEEEEeCCCC
Q 023864 109 GLLYAENDTLFESTGLYG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL-----QKTGFIYDQNNL 180 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg---~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk-----~~~v~V~D~~tl 180 (276)
+.... +++||.-.|..+ .+.+.+||+.+++-....+++....+-+++..+++||++-=. .+.+.+||+.+.
T Consensus 107 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 107 GATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred eEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 55555 589998777543 357999999999877666777666666778889999998532 467999998776
Q ss_pred cEE--EEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEe
Q 023864 181 NKL--EEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANV 252 (276)
Q Consensus 181 k~i--~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANv 252 (276)
+-. ...+.+ ..+.+++..++.||+--| .+.++.+|+++.+-...-.. ...+.- --+...+|+||+--
T Consensus 186 ~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~---~~~~~~~~~i~v~G 260 (301)
T 2vpj_A 186 HWTNVTPMATK-RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCY---VGATVLRGRLYAIA 260 (301)
T ss_dssp EEEEECCCSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBS---CEEEEETTEEEEEC
T ss_pred cEEeCCCCCcc-cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccc---eeEEEECCEEEEEc
Confidence 543 333333 355566666778888655 46899999999876432111 111111 12345688888654
Q ss_pred CCCC----CeEEEEeCCCCc
Q 023864 253 WQVW----PCIPYAYLQAFG 268 (276)
Q Consensus 253 w~s~----d~I~vIDp~T~~ 268 (276)
.... +.|.+.|+++++
T Consensus 261 G~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 261 GYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBCSSSBEEEEEEEETTTTE
T ss_pred CcCCCcccccEEEEcCCCCe
Confidence 3220 468999999865
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.87 E-value=1.4e-06 Score=80.34 Aligned_cols=141 Identities=14% Similarity=0.060 Sum_probs=74.5
Q ss_pred CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCCee
Q 023864 115 NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDGW 194 (276)
Q Consensus 115 dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~EGW 194 (276)
++++|.++. +..|+.+|.+||+++-+.+.+ ... ..-...++++|+..-.++.++.+|++|.+.+.++++..++..
T Consensus 9 ~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~~-~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 9 ETLLFVSTL---DGSLHAVSKRTGSIKWTLKED-PVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp TTEEEEEET---TSEEEEEETTTCCEEEEEECC-CSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred CCEEEEEcC---CCEEEEEECCCCCEEEEecCC-Cce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 578887654 468999999999998887763 222 122334667887766789999999999988877764311111
Q ss_pred --EEee-CCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 195 --GLAT-DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 195 --GLT~-Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.... +++.+|+......|+.+|++|++++-+...... . .+...++.||+..+ . ..|..+|++||++
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~----~~~p~~~~v~~~~~-d-g~v~a~d~~tG~~ 152 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---D----SLSPSTSLLYLGRT-E-YTITMYDTKTREL 152 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC-----------------------------EEEEEE-E-EEEECCCSSSSSC
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---c----cccccCCEEEEEec-C-CEEEEEECCCCCE
Confidence 1111 566777755567899999999999866655321 1 01114677887753 3 6799999999874
No 226
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.86 E-value=0.00049 Score=57.16 Aligned_cols=143 Identities=15% Similarity=0.011 Sum_probs=83.5
Q ss_pred EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCC-CcEEEEEecC---CCC
Q 023864 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNN-LNKLEEFTHQ---MKD 192 (276)
Q Consensus 117 ~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~t-lk~i~~~~~~---~~E 192 (276)
++|.....-.+..|..||+++++.......+....+..+..++..|+.. .++.++++|.++ .+........ ...
T Consensus 11 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 11 RLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLN--SEGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -------CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEE--ETTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred eEeecCCCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEE--cCCeEEEEeCCCCCCceEecccccccccc
Confidence 4443332225678999999999887655555554433333334555544 488999999998 7665444321 113
Q ss_pred eeEEeeCCCEEEEEC----CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEeCCCCC--eEEEEeC
Q 023864 193 GWGLATDGKVLFGSD----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQVWP--CIPYAYL 264 (276)
Q Consensus 193 GWGLT~Dg~~L~vSD----GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANvw~s~d--~I~vIDp 264 (276)
...+++||+.|+.+. +...|+.+|.++.+.. .+.... ..+.+.+. || +|++..... . .|..+|.
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~------~~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~ 160 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR-LMTKNL------PSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDI 160 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE-ECCSSS------SEEEEEECTTSSEEEEEEEET-TEEEEEEEET
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE-EeecCC------CccceEECCCCCEEEEEECCC-CceEEEEEEC
Confidence 456889999887754 4789999998877632 222211 13444555 45 455333223 3 6777777
Q ss_pred CCCcE
Q 023864 265 QAFGS 269 (276)
Q Consensus 265 ~T~~v 269 (276)
++++.
T Consensus 161 ~~~~~ 165 (297)
T 2ojh_A 161 DSGVE 165 (297)
T ss_dssp TTCCE
T ss_pred CCCcc
Confidence 77553
No 227
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.85 E-value=0.00046 Score=61.19 Aligned_cols=111 Identities=7% Similarity=-0.003 Sum_probs=76.5
Q ss_pred CceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEE-EEeecCCCceEEEEEEeCC--EEEEEEeeCCEEEEEeCCCCcE
Q 023864 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVE-AINQMEGSYFGEGLTLLGE--KLFQVTWLQKTGFIYDQNNLNK 182 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~-~~~~l~~~~FgEGit~~g~--~LyqlTwk~~~v~V~D~~tlk~ 182 (276)
....+.|+|||.++.+++ .+..|+.||+.+++.. .....+..---..+++..+ .|.... ++.+.+||..+.+.
T Consensus 172 ~i~~~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYS--PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVG 247 (343)
T ss_dssp CCCEEEECTTSCEEEEEC--TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTT
T ss_pred ceEEEEECCCCCEEEEEc--CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCc
Confidence 357999999999887766 7789999999999876 5555422223346666543 444444 66999999998877
Q ss_pred EEEEec------CC-CCeeEEeeCCCEEEEECC-CceEEEEcCCCC
Q 023864 183 LEEFTH------QM-KDGWGLATDGKVLFGSDG-SSMLYQIDPQTL 220 (276)
Q Consensus 183 i~~~~~------~~-~EGWGLT~Dg~~L~vSDG-S~~L~viDp~t~ 220 (276)
+.++.. +. .....+++||+.|.+..+ ++.|.++|.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 248 TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 654431 11 113778899999988554 778888876543
No 228
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.85 E-value=0.0029 Score=55.30 Aligned_cols=153 Identities=13% Similarity=0.148 Sum_probs=101.5
Q ss_pred EEEEecCCEEEEEcCCCC---CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC-----CEEEEEeCCCC
Q 023864 109 GLLYAENDTLFESTGLYG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ-----KTGFIYDQNNL 180 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg---~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~-----~~v~V~D~~tl 180 (276)
+++.. +++||.-.|..+ .+.+.+||+.+++-....+++....+-+++..+++||++-=.+ +.+.+||+.+.
T Consensus 56 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 134 (302)
T 2xn4_A 56 GMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSN 134 (302)
T ss_dssp EEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred eEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCC
Confidence 55555 589998777433 2579999999998777667776556667888899999986433 47899998876
Q ss_pred cEE--EEEecCCCCeeEEeeCCCEEEEECC--------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEE
Q 023864 181 NKL--EEFTHQMKDGWGLATDGKVLFGSDG--------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWA 250 (276)
Q Consensus 181 k~i--~~~~~~~~EGWGLT~Dg~~L~vSDG--------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyA 250 (276)
+-. ...+.+ ..+-+.+..++.||+--| .+.++.+|+++.+-...-... ..+.- --+...+++||+
T Consensus 135 ~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~---~~~~~~~~~iyv 209 (302)
T 2xn4_A 135 EWFHVAPMNTR-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS-TRRSG---AGVGVLNNLLYA 209 (302)
T ss_dssp EEEEECCCSSC-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS-SCCBS---CEEEEETTEEEE
T ss_pred eEeecCCCCCc-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc-ccccc---ccEEEECCEEEE
Confidence 543 333333 355565555667877543 467999999998765431111 11111 123466888886
Q ss_pred EeCC-----CCCeEEEEeCCCCc
Q 023864 251 NVWQ-----VWPCIPYAYLQAFG 268 (276)
Q Consensus 251 Nvw~-----s~d~I~vIDp~T~~ 268 (276)
-=.. . +.+.+.|+++++
T Consensus 210 ~GG~~~~~~~-~~~~~yd~~~~~ 231 (302)
T 2xn4_A 210 VGGHDGPLVR-KSVEVYDPTTNA 231 (302)
T ss_dssp ECCBSSSSBC-CCEEEEETTTTE
T ss_pred ECCCCCCccc-ceEEEEeCCCCC
Confidence 5322 4 679999999865
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.84 E-value=2.2e-06 Score=79.13 Aligned_cols=148 Identities=7% Similarity=-0.046 Sum_probs=72.2
Q ss_pred cCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEE-eCCEEEEEEeeCCEEEEEeCCCCcEEEEEecCCC
Q 023864 114 ENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTL-LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMK 191 (276)
Q Consensus 114 ~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~-~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~ 191 (276)
.+|++|.+.+ .+..|..+|.+||+.+.+.+... ........+ .++.+|..+ .++.++.+|++|.+++.++..+
T Consensus 47 ~~g~~~v~~s--~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~-~dg~v~a~D~~tG~~~w~~~~~-- 121 (369)
T 2hz6_A 47 VEEPAFLPDP--NDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGK-KQDIWYVIDLLTGEKQQTLSSA-- 121 (369)
T ss_dssp ---CCEEECT--TTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCE-EEEEEEEECCC-------------
T ss_pred cCCCEEEEeC--CCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEe-CCCEEEEEECCCCcEEEEecCC--
Confidence 3566666544 56789999999998765543321 000001112 466777665 4678999999999999888754
Q ss_pred CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 192 DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 192 EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
....++++++.+|+......|+.+|++|++++-+........++-. .+. ..++.+|+.. .. ..|..+|++||++.
T Consensus 122 ~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~-~~~-~~~~~v~~~~-~d-g~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 122 FADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPE-DDV-DYKMSHFVSN-GD-GLVVTVDSESGDVL 196 (369)
T ss_dssp -----------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCC-CCT-TCCCCEEEEE-TS-CEEEEECTTTCCEE
T ss_pred CcccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCcccc-CCc-cccceEEEEC-CC-CEEEEEECCCCcEE
Confidence 2334677889999876667899999999998766655431112110 000 1137788865 35 78999999998764
No 230
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.84 E-value=0.003 Score=58.97 Aligned_cols=161 Identities=11% Similarity=0.109 Sum_probs=103.6
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCCEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGF 173 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~~v~ 173 (276)
.++++.. ...-..++.|++||+++.+++ .+..|+.||. +++.+....-... --.++++. ++++.+..-.++.+.
T Consensus 377 ~~~~~~~-~~~~v~~~~~s~dg~~l~~~~--~d~~v~~~~~-~~~~~~~~~~~~~-~v~~~~~s~d~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 377 LLQTLTG-HSSSVRGVAFSPDGQTIASAS--DDKTVKLWNR-NGQLLQTLTGHSS-SVWGVAFSPDDQTIASASDDKTVK 451 (577)
T ss_dssp EEEEEEC-CSSCEEEEEECTTSSCEEEEE--TTSEEEEECT-TCCEEEEEECCSS-CEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEecC-CCCCeEEEEECCCCCEEEEEe--CCCEEEEEeC-CCCEEEEecCCCC-CeEEEEECCCCCEEEEEcCCCEEE
Confidence 4555543 234468999999998777666 6678999995 5666665543322 22356665 345555666789999
Q ss_pred EEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEE
Q 023864 174 IYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWA 250 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyA 250 (276)
+||. +.+.+.++.-... ....+++||+.|..+.....|.++|. +++.++++.-.. ..++-|.+. ||+..|
T Consensus 452 ~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~-----~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 452 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS-----SSVRGVAFSPDGQTIA 524 (577)
T ss_dssp EEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCS-----SCEEEEEECTTSSCEE
T ss_pred EEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCC-----CCEEEEEEcCCCCEEE
Confidence 9996 5566777653212 23457789999988877889999994 677776654322 234555665 566555
Q ss_pred EeCCCCCeEEEEeCCCCcE
Q 023864 251 NVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 251 Nvw~s~d~I~vIDp~T~~v 269 (276)
..-.. ..|.+-|. +++.
T Consensus 525 s~~~d-g~v~lwd~-~~~~ 541 (577)
T 2ymu_A 525 SASDD-KTVKLWNR-NGQL 541 (577)
T ss_dssp EEETT-SEEEEECT-TSCE
T ss_pred EEECc-CEEEEEeC-CCCE
Confidence 55444 67777774 4443
No 231
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.84 E-value=0.00043 Score=63.82 Aligned_cols=165 Identities=12% Similarity=0.063 Sum_probs=95.2
Q ss_pred EEEEEec--CCCCCceEEEEecCCEEEEEcCCCCC-----------CeEEEEeCCCCc------------EEEEeecCCC
Q 023864 95 VVNEFPH--DPRAFTQGLLYAENDTLFESTGLYGR-----------SSVRRVALETGK------------VEAINQMEGS 149 (276)
Q Consensus 95 Vv~~~Ph--d~~aFTQGL~~~~dg~LyeStG~yg~-----------S~I~~iDl~tgk------------v~~~~~l~~~ 149 (276)
|+..+|. ....+..+|.|++||.||.++|..+. .+|.++|++..- .......+-
T Consensus 118 i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~- 196 (353)
T 2g8s_A 118 VFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI- 196 (353)
T ss_dssp EEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-
T ss_pred EEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-
Confidence 4455664 23456679999999999999986443 479999986420 001111221
Q ss_pred ceEEEEEEe--CCEEEEEEeeCC---EEEEEeCCCC-----------------------------cEEEEEecC-CCCee
Q 023864 150 YFGEGLTLL--GEKLFQVTWLQK---TGFIYDQNNL-----------------------------NKLEEFTHQ-MKDGW 194 (276)
Q Consensus 150 ~FgEGit~~--g~~LyqlTwk~~---~v~V~D~~tl-----------------------------k~i~~~~~~-~~EGW 194 (276)
.-+.|++++ +++||+.....+ .+.++.+... ..+..+... .+-|.
T Consensus 197 rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~ 276 (353)
T 2g8s_A 197 RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGM 276 (353)
T ss_dssp SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEE
T ss_pred cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCccee
Confidence 125578887 479999887643 3433322110 111111110 12222
Q ss_pred EEeeC------CCEEEEEC-CCceEEEEcCCCCcEEEEEEe-ee-CCEeeeeeeeeEEE-CCEEEEE-eCCCCCeEEEEe
Q 023864 195 GLATD------GKVLFGSD-GSSMLYQIDPQTLKVIRKDIV-RY-KGREVRNLNELEFI-KGEVWAN-VWQVWPCIPYAY 263 (276)
Q Consensus 195 GLT~D------g~~L~vSD-GS~~L~viDp~t~~vi~~I~V-~~-~g~pv~~lNELE~i-dG~lyAN-vw~s~d~I~vID 263 (276)
.+... ...||++| ...+|+.++.++.+++..... .. .++| -.++.. ||.||+. .+.+ +.|.+|.
T Consensus 277 ~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp----~~v~~~pdG~lyv~td~~~-g~I~ri~ 351 (353)
T 2g8s_A 277 AFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRI----RDVRTGPDGYLYVLTDESS-GELLKVS 351 (353)
T ss_dssp EEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCE----EEEEECTTSCEEEEECSTT-EEEEEEE
T ss_pred EEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCce----eEEEECCCCcEEEEEeCCC-CEEEEEe
Confidence 23221 25788888 789999999887665544333 11 2333 345554 7899986 5567 8999998
Q ss_pred CC
Q 023864 264 LQ 265 (276)
Q Consensus 264 p~ 265 (276)
|+
T Consensus 352 ~~ 353 (353)
T 2g8s_A 352 PR 353 (353)
T ss_dssp C-
T ss_pred CC
Confidence 74
No 232
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.0011 Score=68.54 Aligned_cols=166 Identities=8% Similarity=-0.012 Sum_probs=111.2
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKT 171 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~ 171 (276)
+.+..++| ..-+..|.|++ |+++.+++ .+..|+.||+++++.+.....+.... .+++. ++.|+.. -.++.
T Consensus 50 ~~~~~~~~--~~~V~~l~fsp-g~~L~S~s--~D~~v~lWd~~~~~~~~~~~~~~~V~--~v~~sp~g~~l~sg-s~dg~ 121 (902)
T 2oaj_A 50 EVVIKLED--RSAIKEMRFVK-GIYLVVIN--AKDTVYVLSLYSQKVLTTVFVPGKIT--SIDTDASLDWMLIG-LQNGS 121 (902)
T ss_dssp EEEEECSS--CCCEEEEEEET-TTEEEEEE--TTCEEEEEETTTCSEEEEEECSSCEE--EEECCTTCSEEEEE-ETTSC
T ss_pred EEEEEcCC--CCCEEEEEEcC-CCEEEEEE--CcCeEEEEECCCCcEEEEEcCCCCEE--EEEECCCCCEEEEE-cCCCc
Confidence 44555566 44568999999 76556666 68899999999999888776544433 34443 4455544 46889
Q ss_pred EEEEeCCCCcEEEEEec--------------CCCCeeEEeeCC-CEEEEECCCceEEEEcCCCCcEEEEEEeee-CCEe-
Q 023864 172 GFIYDQNNLNKLEEFTH--------------QMKDGWGLATDG-KVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGRE- 234 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~--------------~~~EGWGLT~Dg-~~L~vSDGS~~L~viDp~t~~vi~~I~V~~-~g~p- 234 (276)
+.+||.++.+.. .+.. ..-....+.|++ ..|.++.....| ++|.++.+.++++.... .|.+
T Consensus 122 V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~ 199 (902)
T 2oaj_A 122 MIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPG 199 (902)
T ss_dssp EEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCC
T ss_pred EEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCC
Confidence 999999988763 2221 011234456654 566676677789 99999998887765320 0000
Q ss_pred -----------eeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 235 -----------VRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 235 -----------v~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
-..++.+.|. ||..+|..-.+ ..|.+-|.++++.+
T Consensus 200 ~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D-g~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 200 GDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED-NSLVFWDANSGHMI 246 (902)
T ss_dssp STTCCCTTSCBCCCEEEEEECTTSSEEEEEETT-CCEEEEETTTCCEE
T ss_pred cccccccccccCCCeEEEEEcCCCCEEEEEECC-CeEEEEECCCCcEE
Confidence 1246666776 67777777667 89999999997754
No 233
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.79 E-value=0.0025 Score=55.83 Aligned_cols=153 Identities=10% Similarity=0.029 Sum_probs=101.3
Q ss_pred EEEEecCCEEEEEcCCC--CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC------CEEEEEeCCCC
Q 023864 109 GLLYAENDTLFESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ------KTGFIYDQNNL 180 (276)
Q Consensus 109 GL~~~~dg~LyeStG~y--g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~------~~v~V~D~~tl 180 (276)
..+.. +++||.-.|.. ..+.+.+||+.+++-....++|...++-+++..+++||+.-=.+ +.+.+||+.+.
T Consensus 50 ~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 50 ACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp EEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred EEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 44444 57899877732 34789999999998776667776666667788899999986543 67999999876
Q ss_pred cE--EEEEecCCCCeeEEeeCCCEEEEECC----------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEE
Q 023864 181 NK--LEEFTHQMKDGWGLATDGKVLFGSDG----------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (276)
Q Consensus 181 k~--i~~~~~~~~EGWGLT~Dg~~L~vSDG----------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~l 248 (276)
+- +...+.+ ..+-+++.-+..||+--| .+.++.+|+++.+-...-... ..+. ---+...+++|
T Consensus 129 ~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~---~~~~~~~~~~i 203 (306)
T 3ii7_A 129 SWHTKPSMLTQ-RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI-EARK---NHGLVFVKDKI 203 (306)
T ss_dssp EEEEECCCSSC-CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS-SCCB---SCEEEEETTEE
T ss_pred ceEeCCCCcCC-cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc-chhh---cceEEEECCEE
Confidence 54 3334443 355566555667887554 577999999998654321111 1111 11234568888
Q ss_pred EEEeC-----CCCCeEEEEeCCCCc
Q 023864 249 WANVW-----QVWPCIPYAYLQAFG 268 (276)
Q Consensus 249 yANvw-----~s~d~I~vIDp~T~~ 268 (276)
|+-=. .. +.|.+.|+++++
T Consensus 204 ~v~GG~~~~~~~-~~~~~yd~~~~~ 227 (306)
T 3ii7_A 204 FAVGGQNGLGGL-DNVEYYDIKLNE 227 (306)
T ss_dssp EEECCEETTEEB-CCEEEEETTTTE
T ss_pred EEEeCCCCCCCC-ceEEEeeCCCCc
Confidence 76421 14 679999999854
No 234
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.79 E-value=0.0038 Score=54.39 Aligned_cols=153 Identities=16% Similarity=0.164 Sum_probs=100.4
Q ss_pred EEEEecCCEEEEEcCCCC---CCeEEEEeCCCCc---EEEEeecCCCceEEEEEEeCCEEEEEEee-----CCEEEEEeC
Q 023864 109 GLLYAENDTLFESTGLYG---RSSVRRVALETGK---VEAINQMEGSYFGEGLTLLGEKLFQVTWL-----QKTGFIYDQ 177 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg---~S~I~~iDl~tgk---v~~~~~l~~~~FgEGit~~g~~LyqlTwk-----~~~v~V~D~ 177 (276)
+.+.. +++||.-.|..+ .+.+.+||+.+++ -....++|....+-+++..+++||++-=. .+.+.+||+
T Consensus 57 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 135 (301)
T 2vpj_A 57 ASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDP 135 (301)
T ss_dssp EEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEET
T ss_pred cEEEE-CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcC
Confidence 44444 578998777432 3679999999988 65556677655566778889999998532 358999998
Q ss_pred CCCcE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEE
Q 023864 178 NNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVW 249 (276)
Q Consensus 178 ~tlk~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~ly 249 (276)
.+.+- +...+.+ ..+-+.+..+..||+--| .+.++++|+++.+-...-.. ...+. ---+...+++||
T Consensus 136 ~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~---~~~~~~~~~~i~ 210 (301)
T 2vpj_A 136 NIDQWSMLGDMQTA-REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRS---GAGVALLNDHIY 210 (301)
T ss_dssp TTTEEEEEEECSSC-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC-SSCCB---SCEEEEETTEEE
T ss_pred CCCeEEECCCCCCC-cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC-Ccccc---cceEEEECCEEE
Confidence 77653 4444443 355565555667777544 57899999999876533111 11111 112345688888
Q ss_pred EEeCC-----CCCeEEEEeCCCCc
Q 023864 250 ANVWQ-----VWPCIPYAYLQAFG 268 (276)
Q Consensus 250 ANvw~-----s~d~I~vIDp~T~~ 268 (276)
+-=.. . +.|.+.|+++++
T Consensus 211 v~GG~~~~~~~-~~v~~yd~~~~~ 233 (301)
T 2vpj_A 211 VVGGFDGTAHL-SSVEAYNIRTDS 233 (301)
T ss_dssp EECCBCSSSBC-CCEEEEETTTTE
T ss_pred EEeCCCCCccc-ceEEEEeCCCCc
Confidence 65432 4 679999999865
No 235
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.78 E-value=0.0019 Score=58.34 Aligned_cols=164 Identities=10% Similarity=0.041 Sum_probs=108.1
Q ss_pred CCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEee--cC--CCceEEEEEEe--CCEEEEEEeeCCEEEEEe
Q 023864 104 RAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQ--ME--GSYFGEGLTLL--GEKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 104 ~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~--l~--~~~FgEGit~~--g~~LyqlTwk~~~v~V~D 176 (276)
..+...+.|.++ +..+.+++ ++..|+.||+++++.+.... .+ .......+.+. ++.+++..-.++++.+||
T Consensus 157 ~~~v~~~~~~~~~~~~l~s~s--~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd 234 (380)
T 3iz6_a 157 KGYASSCQYVPDQETRLITGS--GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWD 234 (380)
T ss_dssp SSCCCCCBCCSSSSSCEEEEC--TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEE
T ss_pred CcceEEEEEecCCCCEEEEEC--CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEE
Confidence 334456777775 34445556 78899999999998776542 11 12223344443 567777777899999999
Q ss_pred CC-CCcEEEEEec-C-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeC--CEeeeeeeeeEEE-CCEEEE
Q 023864 177 QN-NLNKLEEFTH-Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--GREVRNLNELEFI-KGEVWA 250 (276)
Q Consensus 177 ~~-tlk~i~~~~~-~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~--g~pv~~lNELE~i-dG~lyA 250 (276)
.. +.+.+.++.- . .-....+.|||+.|+....+..|.++|..+.+.+........ ......++-+.+. +|.+.+
T Consensus 235 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 314 (380)
T 3iz6_a 235 LRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF 314 (380)
T ss_dssp TTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE
T ss_pred CCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE
Confidence 87 4566666642 1 124456788999988877788999999999987766543221 1111223445554 566666
Q ss_pred EeCCCCCeEEEEeCCCCcEE
Q 023864 251 NVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 251 Nvw~s~d~I~vIDp~T~~v~ 270 (276)
.-..+ ..|.+-|..+++.+
T Consensus 315 ~g~~d-g~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 315 AGYSN-GDCYVWDTLLAEMV 333 (380)
T ss_dssp EECTT-SCEEEEETTTCCEE
T ss_pred EEECC-CCEEEEECCCCceE
Confidence 66666 89999999887654
No 236
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.77 E-value=0.0031 Score=55.20 Aligned_cols=165 Identities=11% Similarity=-0.014 Sum_probs=106.5
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCC-C---CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEee--
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLY-G---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL-- 168 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~y-g---~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk-- 168 (276)
.+...|.....+ +.... +++||.-.|.- + .+.+.+||+.+++-....++|...++-+++..+++||++--.
T Consensus 84 ~~~~~p~~r~~~--~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 160 (306)
T 3ii7_A 84 SKLGPPTPRDSL--AACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLG 160 (306)
T ss_dssp EEECCSSCCBSC--EEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEES
T ss_pred ECCCCCccccce--eEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCC
Confidence 344455433333 55555 58999877742 1 367999999999876666777655666778889999998643
Q ss_pred -------CCEEEEEeCCCCcE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCE
Q 023864 169 -------QKTGFIYDQNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGR 233 (276)
Q Consensus 169 -------~~~v~V~D~~tlk~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~ 233 (276)
.+.+.+||+.+.+- +...+.+ ..+-+++..++.||+--| .+.++++|+++.+-... ..-..
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~ 236 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELCPMIEA-RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV---SPMPW 236 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC---CCCSC
T ss_pred CCCcccccceEEEeCCCCCeEEECCCccch-hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC---CCCCC
Confidence 56799999987754 3333333 355566655677887654 46899999999865422 11111
Q ss_pred eeeeeeeeEEECCEEEEEeC-----CCCCeEEEEeCCCCc
Q 023864 234 EVRNLNELEFIKGEVWANVW-----QVWPCIPYAYLQAFG 268 (276)
Q Consensus 234 pv~~lNELE~idG~lyANvw-----~s~d~I~vIDp~T~~ 268 (276)
+... --+...+|+||+-=. .. +.|.+.|+++++
T Consensus 237 ~r~~-~~~~~~~~~i~v~GG~~~~~~~-~~~~~yd~~~~~ 274 (306)
T 3ii7_A 237 KGVT-VKCAAVGSIVYVLAGFQGVGRL-GHILEYNTETDK 274 (306)
T ss_dssp CBSC-CEEEEETTEEEEEECBCSSSBC-CEEEEEETTTTE
T ss_pred Cccc-eeEEEECCEEEEEeCcCCCeee-eeEEEEcCCCCe
Confidence 1111 123355888886543 45 789999999965
No 237
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.75 E-value=0.0026 Score=56.40 Aligned_cols=163 Identities=12% Similarity=0.059 Sum_probs=97.9
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec-CCCceEEEEEEeCC-----------E
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGE-----------K 161 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l-~~~~FgEGit~~g~-----------~ 161 (276)
+.+.++.. .......+.|+||++++.++| .+..|+.||+........... +....-..+++..+ .
T Consensus 109 ~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 2xzm_R 109 TTYKRFVG-HQSEVYSVAFSPDNRQILSAG--AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAP 185 (343)
T ss_dssp CEEEEEEC-CCSCEEEEEECSSTTEEEEEE--TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCC
T ss_pred cEEEEEcC-CCCcEEEEEECCCCCEEEEEc--CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCC
Confidence 34555542 244567999999988777777 678999999985433222211 11222334444322 3
Q ss_pred EEEEEeeCCEEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCC-cEEEEEEeeeCCEeeeee
Q 023864 162 LFQVTWLQKTGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTL-KVIRKDIVRYKGREVRNL 238 (276)
Q Consensus 162 LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~-~vi~~I~V~~~g~pv~~l 238 (276)
++...-.++.+.+|| .+.+.+.++.-... ....+++||+.|.....+..|.++|..+. ........ +. .+
T Consensus 186 ~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~---~~---~v 258 (343)
T 2xzm_R 186 YFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA---GS---TI 258 (343)
T ss_dssp EEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC---SS---CE
T ss_pred EEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC---CC---cE
Confidence 555566789999999 45566666642211 23346789999988777889999998443 33333322 22 35
Q ss_pred eeeEEEC-CEEEEEeCCCCCeEEEEeCCCCc
Q 023864 239 NELEFIK-GEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 239 NELE~id-G~lyANvw~s~d~I~vIDp~T~~ 268 (276)
+.+.+.. +.+.+ +... +.|.+.|..+++
T Consensus 259 ~~v~~sp~~~~la-~~~d-~~v~iw~~~~~~ 287 (343)
T 2xzm_R 259 NQIAFNPKLQWVA-VGTD-QGVKIFNLMTQS 287 (343)
T ss_dssp EEEEECSSSCEEE-EEES-SCEEEEESSSCC
T ss_pred EEEEECCCCCEEE-EECC-CCEEEEEeCCCC
Confidence 5566653 44333 3345 678888877644
No 238
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.75 E-value=0.00039 Score=62.51 Aligned_cols=115 Identities=9% Similarity=0.092 Sum_probs=82.4
Q ss_pred CCCceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcE----EEEeecCCCc-----------eEEEEEEeCC-EEEEEE
Q 023864 104 RAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKV----EAINQMEGSY-----------FGEGLTLLGE-KLFQVT 166 (276)
Q Consensus 104 ~aFTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv----~~~~~l~~~~-----------FgEGit~~g~-~LyqlT 166 (276)
...+..+.|+|++ .++.+++ .+..|+.||+.+++. .........+ --..+++..+ ++....
T Consensus 226 ~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 226 TEVITAAEFHPNSCNTFVYSS--SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp CCCEEEEEECSSCTTEEEEEE--TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred CcceEEEEECCCCCcEEEEEe--CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe
Confidence 4456799999997 7777666 677999999999885 4444333221 2345666543 333333
Q ss_pred eeCCEEEEEeCCC-CcEEEEEecCCCCe-------------------eEEeeCCCEEEEECCCceEEEEcCCCCcEE
Q 023864 167 WLQKTGFIYDQNN-LNKLEEFTHQMKDG-------------------WGLATDGKVLFGSDGSSMLYQIDPQTLKVI 223 (276)
Q Consensus 167 wk~~~v~V~D~~t-lk~i~~~~~~~~EG-------------------WGLT~Dg~~L~vSDGS~~L~viDp~t~~vi 223 (276)
-. +.+.+||..+ .+.+.++... ++ ..+++||+.|+....+..|.++|.++.+.+
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVH--EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESC--GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred eC-CeEEEEeCCCCccccceeecc--ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 33 9999999987 7888888643 21 678899999988777889999999998876
No 239
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.75 E-value=0.00081 Score=66.39 Aligned_cols=156 Identities=13% Similarity=0.068 Sum_probs=90.5
Q ss_pred ceEEEEecCCE-EEEEcCCCCCC--eEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeC------------
Q 023864 107 TQGLLYAENDT-LFESTGLYGRS--SVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQ------------ 169 (276)
Q Consensus 107 TQGL~~~~dg~-LyeStG~yg~S--~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~------------ 169 (276)
..++.|+|||+ |..+...-|.. .|+++|+++|+..... ++...+ .++++. |+.||.....+
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccCccc-ceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 35789999986 33222211443 8999999999876532 221111 245554 56788776543
Q ss_pred ---CEEEEEeCCCCcEEEEE--ecCC-C---CeeEEeeCCCEEEEE-C-C---CceEEEEcCCC------Cc-EEEEEEe
Q 023864 170 ---KTGFIYDQNNLNKLEEF--THQM-K---DGWGLATDGKVLFGS-D-G---SSMLYQIDPQT------LK-VIRKDIV 228 (276)
Q Consensus 170 ---~~v~V~D~~tlk~i~~~--~~~~-~---EGWGLT~Dg~~L~vS-D-G---S~~L~viDp~t------~~-vi~~I~V 228 (276)
..++++|..+.+..... ..+. + .+..+++||++|+++ . + .+.|+++|.++ .+ ..+.+..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 35999999887632222 2110 1 245578999988763 2 3 57999999886 43 2444544
Q ss_pred eeCCEeeeeeeeeEEECCEEEEEeCCC--CCeEEEEeCCCCc
Q 023864 229 RYKGREVRNLNELEFIKGEVWANVWQV--WPCIPYAYLQAFG 268 (276)
Q Consensus 229 ~~~g~pv~~lNELE~idG~lyANvw~s--~d~I~vIDp~T~~ 268 (276)
..++... -..-.+++||..--.. ...|.++|.++++
T Consensus 285 ~~~~~~~----~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 285 NFEGEYD----YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SSSSCEE----EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CCCcEEE----EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 3322211 1123355666443221 1379999998864
No 240
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.74 E-value=0.0012 Score=60.19 Aligned_cols=165 Identities=10% Similarity=-0.033 Sum_probs=92.9
Q ss_pred CCCCceEEEEec--------CCEEEEEcCCCCCCeEEEEeCCCCcEEEEe-ecCCCceEEEEEEeC--CEEEEEEeeCCE
Q 023864 103 PRAFTQGLLYAE--------NDTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLLG--EKLFQVTWLQKT 171 (276)
Q Consensus 103 ~~aFTQGL~~~~--------dg~LyeStG~yg~S~I~~iDl~tgkv~~~~-~l~~~~FgEGit~~g--~~LyqlTwk~~~ 171 (276)
...+++.+.|+| ||+++.|+| .+..|+.||+.+++..... ..... ...+++.. ..+.+..-.++.
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s--~D~tv~~Wd~~~~~~~~~~~~~~~~--v~~v~~~p~~~~~l~~~~~d~~ 210 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVG--DDCTLIIWRLTDEGPILAGYPLSSP--GISVQFRPSNPNQLIVGERNGN 210 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEE--TTSEEEEEEEETTEEEEEEEECSSC--EEEEEEETTEEEEEEEEETTSE
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEE--CCCeEEEEECCCCceeeeecCCCCC--cEEEEECCCCCceEEecCCCCE
Confidence 467889999987 789999988 7899999999887644433 33333 45677764 356677778999
Q ss_pred EEEEeCCCCcEEEEEecC--C-------------------------CCeeEEe-eCCCEEEEECCCceEEEEcCCCCcEE
Q 023864 172 GFIYDQNNLNKLEEFTHQ--M-------------------------KDGWGLA-TDGKVLFGSDGSSMLYQIDPQTLKVI 223 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~--~-------------------------~EGWGLT-~Dg~~L~vSDGS~~L~viDp~t~~vi 223 (276)
+.+||..+.+...+.... . -....+. +||+.|+......++.++|..+.+..
T Consensus 211 v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 211 IRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp EEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred EEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 999999887765543210 0 0111222 68888888777889999999887766
Q ss_pred EEEEeeeCC-Eeeee---eee---------eEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEE
Q 023864 224 RKDIVRYKG-REVRN---LNE---------LEFI--KGEVWANVWQVWPCIPYAYLQAFGSSL 271 (276)
Q Consensus 224 ~~I~V~~~g-~pv~~---lNE---------LE~i--dG~lyANvw~s~d~I~vIDp~T~~v~l 271 (276)
..+...... ..+.. ... ..+. .+..|+.....+..|.+.|.++++...
T Consensus 291 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~ 353 (393)
T 4gq1_A 291 NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS 353 (393)
T ss_dssp -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE
T ss_pred ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 555432100 00000 000 0111 133444433332789999999877543
No 241
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.73 E-value=0.00012 Score=64.61 Aligned_cols=170 Identities=9% Similarity=-0.008 Sum_probs=91.8
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc-EEEEeecC-CCceEEEEEEe-CCEEEEEEeeCC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK-VEAINQME-GSYFGEGLTLL-GEKLFQVTWLQK 170 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk-v~~~~~l~-~~~FgEGit~~-g~~LyqlTwk~~ 170 (276)
+.+.++.. .......+.|++++.++.+++ .+..|+.||+++++ ......+. ...--..+++. +++++...-.++
T Consensus 46 ~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 122 (377)
T 3dwl_C 46 KHARTFSD-HDKIVTCVDWAPKSNRIVTCS--QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR 122 (377)
T ss_dssp EECCCBCC-CSSCEEEEEECTTTCCEEEEE--TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS
T ss_pred EEEEEEec-CCceEEEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC
Confidence 34445542 244557999999988777666 67789999999987 11111121 11122345554 234444445688
Q ss_pred EEEEEeCCCCc---EEEEEecC-CC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEE--------------EEEEeee
Q 023864 171 TGFIYDQNNLN---KLEEFTHQ-MK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVI--------------RKDIVRY 230 (276)
Q Consensus 171 ~v~V~D~~tlk---~i~~~~~~-~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi--------------~~I~V~~ 230 (276)
.+.+||.++.+ .+..+..+ .. ....+.+||+.|+....+..|.++|.++.++. .+.....
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY 202 (377)
T ss_dssp CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC
T ss_pred eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc
Confidence 99999998876 36666531 11 23346678998888766788999997643311 1111111
Q ss_pred CCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 231 KGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 231 ~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
++ -..++.+.+. +|...|..-.. ..|.+.|.++++.
T Consensus 203 -~~-~~~v~~~~~sp~~~~l~~~~~d-~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 203 -PS-GGWVHAVGFSPSGNALAYAGHD-SSVTIAYPSAPEQ 239 (377)
T ss_dssp -CC-SSSEEEEEECTTSSCEEEEETT-TEEC-CEECSTTS
T ss_pred -cC-CceEEEEEECCCCCEEEEEeCC-CcEEEEECCCCCC
Confidence 11 1234555565 56555555455 7888888888764
No 242
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.73 E-value=0.00016 Score=69.74 Aligned_cols=161 Identities=11% Similarity=0.015 Sum_probs=94.2
Q ss_pred CceEEEEecCCE-EEEEcCC-------CCCCeEEEEeCCC------CcEEEEeecCCCceEEEEEE--eCCEEEEEEeeC
Q 023864 106 FTQGLLYAENDT-LFESTGL-------YGRSSVRRVALET------GKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQ 169 (276)
Q Consensus 106 FTQGL~~~~dg~-LyeStG~-------yg~S~I~~iDl~t------gkv~~~~~l~~~~FgEGit~--~g~~LyqlTwk~ 169 (276)
...++.|+|||+ |+.+... .+...|..+|+++ ++..... .....+..++++ +|++|+...|..
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS-DDAHRFVTGPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS-CSCSSEECCCEECTTSSEEEEEEECT
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE-ecCCCcccCceECCCCCEEEEEECCC
Confidence 346889999985 5443321 2347899999998 7653322 022223334444 467888888754
Q ss_pred -------CEEEEEeCC-CC--cEEEEEecC---CCCeeEEeeCCCEEEEECC--CceEEEEcCCCCcEEEEEEeee-CCE
Q 023864 170 -------KTGFIYDQN-NL--NKLEEFTHQ---MKDGWGLATDGKVLFGSDG--SSMLYQIDPQTLKVIRKDIVRY-KGR 233 (276)
Q Consensus 170 -------~~v~V~D~~-tl--k~i~~~~~~---~~EGWGLT~Dg~~L~vSDG--S~~L~viDp~t~~vi~~I~V~~-~g~ 233 (276)
..++++|.+ +. +...++... .......++||+.+|.+|. ..+|+.+|+++.+......... .+.
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC
Confidence 589999998 55 233344321 1122346789997777874 4499999998887643222110 011
Q ss_pred eeee--eeeeEEE-CCEEE-EEeCCCCCeEEEEeCCCCc
Q 023864 234 EVRN--LNELEFI-KGEVW-ANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 234 pv~~--lNELE~i-dG~ly-ANvw~s~d~I~vIDp~T~~ 268 (276)
|... ...+.+. +|+++ ...... ..|.++|+++++
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~d~~~~~ 327 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGKGA-AVLGILDPESGE 327 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBSSS-CEEEEEETTTTE
T ss_pred ccccccCceEeEeCCCEEEEEEEcCc-cEEEEEECCCCc
Confidence 1111 2334454 56544 333355 789999988765
No 243
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.73 E-value=0.00047 Score=59.54 Aligned_cols=162 Identities=7% Similarity=-0.031 Sum_probs=100.9
Q ss_pred EEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeC-CCCcEEEEee--cCCCceEEEEEEeCCEEEEEEeeCC
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVAL-ETGKVEAINQ--MEGSYFGEGLTLLGEKLFQVTWLQK 170 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl-~tgkv~~~~~--l~~~~FgEGit~~g~~LyqlTwk~~ 170 (276)
+...+.|. .-...+.|++++. ++.+++ .+..|+.||+ ++++...... -... -..+++..+.++...-.++
T Consensus 49 ~~~~~~~~--~~v~~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~l~s~~~d~ 122 (342)
T 1yfq_A 49 LLQSLRYK--HPLLCCNFIDNTDLQIYVGT--VQGEILKVDLIGSPSFQALTNNEANLG--ICRICKYGDDKLIAASWDG 122 (342)
T ss_dssp EEEEEECS--SCEEEEEEEESSSEEEEEEE--TTSCEEEECSSSSSSEEECBSCCCCSC--EEEEEEETTTEEEEEETTS
T ss_pred ceeeeecC--CceEEEEECCCCCcEEEEEc--CCCeEEEEEeccCCceEeccccCCCCc--eEEEEeCCCCEEEEEcCCC
Confidence 33444663 3457999999988 666655 6778999999 9998733222 2222 3456665344444555689
Q ss_pred EEEEEeCCC---------CcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCC-CcEEEEEEeeeCCEeeeeeee
Q 023864 171 TGFIYDQNN---------LNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYKGREVRNLNE 240 (276)
Q Consensus 171 ~v~V~D~~t---------lk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t-~~vi~~I~V~~~g~pv~~lNE 240 (276)
.+.+||..+ .+.+.++..+ ..-+.++..++.+++......|.++|..+ ++............ .++.
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~ 198 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVK-NKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY---QIRD 198 (342)
T ss_dssp EEEEECHHHHTTBCEEEEESCSSSSSSC-CCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSS---CEEE
T ss_pred eEEEEcccccccccccccCCeeeEEeeC-CceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCC---ceeE
Confidence 999999887 6666666544 35556666555677777788999999998 55422211111112 3445
Q ss_pred eEEE--CCEEEEEeCCCCCeEEEEeCCCC
Q 023864 241 LEFI--KGEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 241 LE~i--dG~lyANvw~s~d~I~vIDp~T~ 267 (276)
+.+. +|..++..-.. ..|.+.|..++
T Consensus 199 i~~~~~~~~~l~~~~~d-g~i~i~~~~~~ 226 (342)
T 1yfq_A 199 VALLPKEQEGYACSSID-GRVAVEFFDDQ 226 (342)
T ss_dssp EEECSGGGCEEEEEETT-SEEEEEECCTT
T ss_pred EEECCCCCCEEEEEecC-CcEEEEEEcCC
Confidence 5566 45555555455 77777665553
No 244
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.72 E-value=0.001 Score=63.98 Aligned_cols=159 Identities=8% Similarity=-0.077 Sum_probs=94.5
Q ss_pred CCceEEEEecCCE-EEEEcCC-----CCCCeEEEEeCC-CCcEE--EEeecCCCceEEEEEEe-CCEEEEEEeeCC--EE
Q 023864 105 AFTQGLLYAENDT-LFESTGL-----YGRSSVRRVALE-TGKVE--AINQMEGSYFGEGLTLL-GEKLFQVTWLQK--TG 172 (276)
Q Consensus 105 aFTQGL~~~~dg~-LyeStG~-----yg~S~I~~iDl~-tgkv~--~~~~l~~~~FgEGit~~-g~~LyqlTwk~~--~v 172 (276)
.+..++.|+|||+ |+.+... ++.+.|..+|++ +|++. ..+.-+.......+++. ++++|.++-.++ .+
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l 267 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL 267 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE
Confidence 4556788999985 5433322 134789999999 68321 22211111122345554 345888877777 89
Q ss_pred EEEeCCCCcEEEEEecCC----------CCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeee
Q 023864 173 FIYDQNNLNKLEEFTHQM----------KDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~~----------~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNEL 241 (276)
+++|.++.+...-.+... ...+.+++||+.++.++ |..+|+.+|.++.+ ++++... ...+ +-+
T Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~--~~~~---~~~ 341 (662)
T 3azo_A 268 HRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGE-LVDAAGP--WTEW---AAT 341 (662)
T ss_dssp EEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTE-EEECCSS--CCEE---EEE
T ss_pred EEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCc-EEEecCC--CCeE---EEE
Confidence 999987766543222210 12344567888888765 78889999998876 3444332 1222 233
Q ss_pred -EEECCEEEEEeCCCCC---eEEEEeCCCCcEE
Q 023864 242 -EFIKGEVWANVWQVWP---CIPYAYLQAFGSS 270 (276)
Q Consensus 242 -E~idG~lyANvw~s~d---~I~vIDp~T~~v~ 270 (276)
...++.++...... + .|.++|+++++..
T Consensus 342 ~s~~~~~~~~~~~~~-~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 342 LTVSGTRAVGVAASP-RTAYEVVELDTVTGRAR 373 (662)
T ss_dssp EEEETTEEEEEEEET-TEEEEEEEEETTTCCEE
T ss_pred EecCCCEEEEEEcCC-CCCCEEEEEECCCCceE
Confidence 45566655444333 3 7999999987754
No 245
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.72 E-value=0.0049 Score=55.38 Aligned_cols=151 Identities=8% Similarity=-0.065 Sum_probs=92.9
Q ss_pred EEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEE---------------------
Q 023864 109 GLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVT--------------------- 166 (276)
Q Consensus 109 GL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlT--------------------- 166 (276)
-+.+.+++. +..+++ ++..|+.||..+++.+.....+.... .+.+..+.++++.
T Consensus 63 ~~~~~~~~~~~~~~~~--~d~~v~iWd~~~~~~~~~~~~~~~v~--~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 138 (355)
T 3vu4_A 63 KVRMLHRTNYVAFVTG--VKEVVHIWDDVKKQDVSRIKVDAPVK--DLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR 138 (355)
T ss_dssp EEEECTTSSEEEEECS--STTEEEEEETTTTEEEEEEECSSCEE--EEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE
T ss_pred EEEEcCCCCEEEEEEC--CccEEEEEECCCCcEEEEEECCCceE--EEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc
Confidence 455655544 444455 56799999999999888877665432 4444444444332
Q ss_pred -----------------eeCCEEEEEeCCCCc---------------E-EEEEecCCC--CeeEEeeCCCEEEEECCCce
Q 023864 167 -----------------WLQKTGFIYDQNNLN---------------K-LEEFTHQMK--DGWGLATDGKVLFGSDGSSM 211 (276)
Q Consensus 167 -----------------wk~~~v~V~D~~tlk---------------~-i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~ 211 (276)
-.++.+.+||..+.+ + +.++.-... ....+++||+.|.....+.+
T Consensus 139 ~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 139 FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence 223445555555433 0 233321111 23346789998888766777
Q ss_pred -EEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCC
Q 023864 212 -LYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 212 -L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~ 267 (276)
|.++|.++++.+.++.-+... ..++.+.+. ||...|..-.+ ..|.+-|.+++
T Consensus 219 ~v~iwd~~~~~~~~~~~~g~h~---~~v~~~~~s~~~~~l~s~s~d-~~v~iw~~~~~ 272 (355)
T 3vu4_A 219 IIRVFKTEDGVLVREFRRGLDR---ADVVDMKWSTDGSKLAVVSDK-WTLHVFEIFND 272 (355)
T ss_dssp EEEEEETTTCCEEEEEECTTCC---SCEEEEEECTTSCEEEEEETT-CEEEEEESSCC
T ss_pred EEEEEECCCCcEEEEEEcCCCC---CcEEEEEECCCCCEEEEEECC-CEEEEEEccCC
Confidence 999999999998877632111 245666776 57767666566 88999898764
No 246
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.69 E-value=0.0016 Score=63.74 Aligned_cols=164 Identities=9% Similarity=-0.015 Sum_probs=108.1
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec--CCCceEEEEEEeCC---EEEEEEeeC
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM--EGSYFGEGLTLLGE---KLFQVTWLQ 169 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l--~~~~FgEGit~~g~---~LyqlTwk~ 169 (276)
.+.++.. ...-+..+.|++|+.++.+++ .+..|+.||............ +....-..+++..+ .+.+..-.+
T Consensus 464 ~~~~~~~-h~~~v~~~~~s~~~~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 540 (694)
T 3dm0_A 464 STRRFVG-HTKDVLSVAFSLDNRQIVSAS--RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 540 (694)
T ss_dssp EEEEEEC-CSSCEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred ceeEEeC-CCCCEEEEEEeCCCCEEEEEe--CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence 4445532 234467999999988777777 678999999876543322211 12233455666542 355556678
Q ss_pred CEEEEEeCCCCcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC
Q 023864 170 KTGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG 246 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG 246 (276)
+.+.+||..+.+.+.++.-... ....+++||+.|.....+..|.++|..+.+.+..+... . .++-+.+. ++
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~---~---~v~~~~~sp~~ 614 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---S---VIHALCFSPNR 614 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS---S---CEEEEEECSSS
T ss_pred CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC---C---cEEEEEEcCCC
Confidence 9999999999998888853211 23346789998888777889999999999876554322 1 34455565 44
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcE
Q 023864 247 EVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 247 ~lyANvw~s~d~I~vIDp~T~~v 269 (276)
++.+.. .. +.|.+.|.++++.
T Consensus 615 ~~l~~~-~~-~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 615 YWLCAA-TE-HGIKIWDLESKSI 635 (694)
T ss_dssp SEEEEE-ET-TEEEEEETTTTEE
T ss_pred cEEEEE-cC-CCEEEEECCCCCC
Confidence 444433 45 7799999998554
No 247
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.69 E-value=0.0057 Score=51.88 Aligned_cols=125 Identities=9% Similarity=0.049 Sum_probs=84.9
Q ss_pred EEEEEEe-cCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEE
Q 023864 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTG 172 (276)
Q Consensus 94 ~Vv~~~P-hd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v 172 (276)
++++.+. |........+.|+++|+++.+++ .+..|+.||+++++.+....-... ....+...+..+ ...-.++.+
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs--~Dg~v~iw~~~~~~~~~~~~~h~~-~~~~~~~~~~~l-~s~~~~~~~ 131 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGT--SSAEVQLWDVQQQKRLRNMTSHSA-RVGSLSWNSYIL-SSGSRSGHI 131 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSS-CEEEEEEETTEE-EEEETTSEE
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEE--CCCcEEEeecCCceeEEEecCccc-eEEEeecCCCEE-EEEecCCce
Confidence 4555554 44566788999999998877766 678999999999998887654433 233455555544 445566777
Q ss_pred EEEeCCCCc-EEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcE
Q 023864 173 FIYDQNNLN-KLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKV 222 (276)
Q Consensus 173 ~V~D~~tlk-~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~v 222 (276)
.+++..+.. .+.++.-... ......++|+.|+.......|.++|.++.+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 132 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred EeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 777776554 4455442211 2223557888888877788999999988654
No 248
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.69 E-value=0.00022 Score=67.24 Aligned_cols=149 Identities=11% Similarity=-0.023 Sum_probs=94.0
Q ss_pred EEEEecCCCCCceEEEEecCCEEEE----EcCCCCCCeEEEEeCCCC--------cEEEEeecC--CCceEEEEEEeC--
Q 023864 96 VNEFPHDPRAFTQGLLYAENDTLFE----STGLYGRSSVRRVALETG--------KVEAINQME--GSYFGEGLTLLG-- 159 (276)
Q Consensus 96 v~~~Phd~~aFTQGL~~~~dg~Lye----StG~yg~S~I~~iDl~tg--------kv~~~~~l~--~~~FgEGit~~g-- 159 (276)
..+++|+ .-...+.|++||+++. +++ .+..|++||++++ +.+....+- ..---.++++..
T Consensus 86 ~~~~~~~--~~v~~l~~spdg~~lav~~~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 161 (434)
T 2oit_A 86 GLLVPMK--FPIHHLALSCDNLTLSACMMSSE--YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV 161 (434)
T ss_dssp CEEECCS--SCEEEEEECTTSCEEEEEEEETT--TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC
T ss_pred cccccCC--CcccEEEEcCCCCEEEEEEeccC--CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC
Confidence 3456663 3457999999987554 555 7889999998765 222222221 122345667653
Q ss_pred CEEEEEEeeCCEEEEEeCCCCcEEEEEe-cC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeC---CEe
Q 023864 160 EKLFQVTWLQKTGFIYDQNNLNKLEEFT-HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK---GRE 234 (276)
Q Consensus 160 ~~LyqlTwk~~~v~V~D~~tlk~i~~~~-~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~---g~p 234 (276)
+.++...-.++++.+||..+.+.+.... +. .......++||+.|++...+.+|.++|+. ++..+.+..... +++
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~ 240 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHP 240 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSC
T ss_pred CCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCc
Confidence 5677777789999999999886554332 22 11233457899999998888899999998 666666654321 111
Q ss_pred eeeeeeeEEECCEEEE
Q 023864 235 VRNLNELEFIKGEVWA 250 (276)
Q Consensus 235 v~~lNELE~idG~lyA 250 (276)
....-+.|.....|+
T Consensus 241 -~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 241 -VRVLDVLWIGTYVFA 255 (434)
T ss_dssp -EEEEEEEEEETTEEE
T ss_pred -eeEEEEEEecCceEE
Confidence 144556676554444
No 249
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.68 E-value=0.0022 Score=57.61 Aligned_cols=118 Identities=10% Similarity=-0.002 Sum_probs=81.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i 183 (276)
...+..+.|++||+++.+ | .++.+++||.++++.......+. .....+...++.+..+.-.++++.+||..+.+.+
T Consensus 19 ~~~V~~v~fs~dg~~la~-g--~~~~~~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLIL-S--TLKSFEIYNVHPVAHIMSQEMRH-LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV 94 (355)
T ss_dssp CCCCCEEEECTTSSEEEE-E--CSSEEEEEEETTEEEEEEEECSC-CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred CCceEEEEECCCCCEEEE-E--cCCEEEEEecCCcceeeeeecCC-eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence 344569999999987764 4 34568999999988766655542 1111222234566666667789999999999999
Q ss_pred EEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCC-cEEEEEE
Q 023864 184 EEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTL-KVIRKDI 227 (276)
Q Consensus 184 ~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~-~vi~~I~ 227 (276)
.++.++ .+-.++..+.+.++++. .++|+++|..+. +.+.++.
T Consensus 95 ~~~~~~-~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~ 137 (355)
T 3vu4_A 95 SRIKVD-APVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDI 137 (355)
T ss_dssp EEEECS-SCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCE
T ss_pred EEEECC-CceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEec
Confidence 999876 35556666666666642 467999999887 5554443
No 250
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.68 E-value=0.0026 Score=56.18 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=101.9
Q ss_pred EEEEecCCEEEEEcCCCC---CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEee-----CCEEEEEeCCCC
Q 023864 109 GLLYAENDTLFESTGLYG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL-----QKTGFIYDQNNL 180 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg---~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk-----~~~v~V~D~~tl 180 (276)
++... +++||.-.|..+ .+.+.+||+++++-....++|...++-+++..+++||++-=. .+.+.+||+.+.
T Consensus 116 ~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 116 GVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 55555 589998766433 367999999999877666777666666778889999998532 467999999876
Q ss_pred cE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEe
Q 023864 181 NK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANV 252 (276)
Q Consensus 181 k~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANv 252 (276)
+- +...+.+ ..+-+++..++.||+--| .+.++++|+++.+-...-... ..+. . --+...+|+||+-=
T Consensus 195 ~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~--~-~~~~~~~~~i~v~G 269 (308)
T 1zgk_A 195 EWRMITAMNTI-RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK-HRRS--A-LGITVHQGRIYVLG 269 (308)
T ss_dssp EEEECCCCSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS-SCCB--S-CEEEEETTEEEEEC
T ss_pred eEeeCCCCCCc-cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC-CCcc--c-eEEEEECCEEEEEc
Confidence 54 3333333 355566666777888655 478999999998654321111 1111 1 12345688888643
Q ss_pred C-----CCCCeEEEEeCCCCc
Q 023864 253 W-----QVWPCIPYAYLQAFG 268 (276)
Q Consensus 253 w-----~s~d~I~vIDp~T~~ 268 (276)
. .. +.|.+.|+++++
T Consensus 270 G~~~~~~~-~~v~~yd~~~~~ 289 (308)
T 1zgk_A 270 GYDGHTFL-DSVECYDPDTDT 289 (308)
T ss_dssp CBCSSCBC-CEEEEEETTTTE
T ss_pred CcCCCccc-ceEEEEcCCCCE
Confidence 2 24 789999999865
No 251
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.68 E-value=0.0006 Score=62.78 Aligned_cols=154 Identities=13% Similarity=0.148 Sum_probs=100.7
Q ss_pred CCCceEEEEec-CCEEEEEcCCCCCCeEEEEeCCCC---cEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeC
Q 023864 104 RAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETG---KVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQ 177 (276)
Q Consensus 104 ~aFTQGL~~~~-dg~LyeStG~yg~S~I~~iDl~tg---kv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~ 177 (276)
..-...+.|++ ++.++.+++ ++..|++||+.++ +......-... -...+++. +..+++..-.++.+.+||.
T Consensus 231 ~~~v~~v~~~p~~~~~l~s~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~-~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 231 TAVVEDVAWHLLHESLFGSVA--DDQKLMIWDTRNNNTSKPSHTVDAHTA-EVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCSCSSSCSEEEECCSS-CEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCCEeeeEEeCCCCCEEEEEe--CCCeEEEEECCCCCCCcceeEeecCCC-CeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 44567999998 467777776 7899999999987 34444332221 12345554 4458888889999999999
Q ss_pred CCC-cEEEEEecCCCCeeE--EeeCCCEEEEEC-CCceEEEEcCCCC--------------cEEEEEEeeeCCEeeeeee
Q 023864 178 NNL-NKLEEFTHQMKDGWG--LATDGKVLFGSD-GSSMLYQIDPQTL--------------KVIRKDIVRYKGREVRNLN 239 (276)
Q Consensus 178 ~tl-k~i~~~~~~~~EGWG--LT~Dg~~L~vSD-GS~~L~viDp~t~--------------~vi~~I~V~~~g~pv~~lN 239 (276)
.+. +.+.++......-+. ++++++.++++. +.+.|.++|..+. +.+.... ++ -..++
T Consensus 308 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~h-~~~v~ 382 (430)
T 2xyi_A 308 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG----GH-TAKIS 382 (430)
T ss_dssp TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC----CC-SSCEE
T ss_pred CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC----CC-CCCce
Confidence 884 567777633123333 567888766655 5789999998773 2222211 11 12456
Q ss_pred eeEEE-CCE-EEEEeCCCCCeEEEEeCCC
Q 023864 240 ELEFI-KGE-VWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 240 ELE~i-dG~-lyANvw~s~d~I~vIDp~T 266 (276)
.+.|. +|. ++|..-.+ +.|.+-|+.+
T Consensus 383 ~~~~~p~~~~~l~s~s~d-g~i~iw~~~~ 410 (430)
T 2xyi_A 383 DFSWNPNEPWIICSVSED-NIMQVWQMAE 410 (430)
T ss_dssp EEEECSSSTTEEEEEETT-SEEEEEEECH
T ss_pred EEEECCCCCCEEEEEECC-CCEEEeEccc
Confidence 67776 444 77777667 8888877654
No 252
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.67 E-value=0.00063 Score=66.62 Aligned_cols=121 Identities=13% Similarity=0.152 Sum_probs=88.5
Q ss_pred EEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEE
Q 023864 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~ 173 (276)
+++.++.. ....+..+.|++||.++.|++ .+..|+.||+.+++.+....... .-..+++..+..+.+.-.++.+.
T Consensus 552 ~~~~~~~~-h~~~v~~v~~spdg~~l~sg~--~Dg~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~~~i~ 626 (694)
T 3dm0_A 552 KLRSTLAG-HTGYVSTVAVSPDGSLCASGG--KDGVVLLWDLAEGKKLYSLEANS--VIHALCFSPNRYWLCAATEHGIK 626 (694)
T ss_dssp CEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSBCEEEETTTTEEEECCBCSS--CEEEEEECSSSSEEEEEETTEEE
T ss_pred cEEEEEcC-CCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCCCceEEEecCCC--cEEEEEEcCCCcEEEEEcCCCEE
Confidence 34555542 355678999999999888877 78899999999999876654443 34567777666666677788999
Q ss_pred EEeCCCCcEEEEEecCCC---------------------CeeEEeeCCCEEEEECCCceEEEEcCCC
Q 023864 174 IYDQNNLNKLEEFTHQMK---------------------DGWGLATDGKVLFGSDGSSMLYQIDPQT 219 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~~---------------------EGWGLT~Dg~~L~vSDGS~~L~viDp~t 219 (276)
+||..+.+.+.++..... -...+++||+.|+....+..|.++|...
T Consensus 627 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 627 IWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 999999999888753210 1133568999999877788899998754
No 253
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.67 E-value=0.0045 Score=57.83 Aligned_cols=157 Identities=10% Similarity=0.098 Sum_probs=97.7
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEE
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~ 173 (276)
.++.++- ...-..++.|+||+.++.+++ .+..|+.||..+.++.....-... ..++++.. ++.......++.+.
T Consensus 295 ~~~~~~~-h~~~v~~~~~~~~~~~l~t~~--~d~~i~~w~~~~~~~~~~~~~~~~--v~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 295 LLQTLTG-HSSSVWGVAFSPDGQTIASAS--DDKTVKLWNRNGQHLQTLTGHSSS--VWGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp EEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTSCEEEEECCCSSC--EEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEEEec-CCCCeEEEEECCCCCEEEEEe--CCCeEEEEeCCCCeeEEEeCCCCC--EEEEEECCCCCEEEEEeCCCEEE
Confidence 3445442 244557999999988777666 677899999987765332222223 23566653 45556667889999
Q ss_pred EEeCCCCcEEEEEecCC--CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEE
Q 023864 174 IYDQNNLNKLEEFTHQM--KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWA 250 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~--~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyA 250 (276)
++|. +.+.+.++.-.. -.+..+++||+.|........|.++|. +.+.++++.-.. . .++.+.+. |++..|
T Consensus 370 ~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~--~---~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 370 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--S---SVWGVAFSPDDQTIA 442 (577)
T ss_dssp EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS--S---CEEEEEECTTSSEEE
T ss_pred EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC--C---CeEEEEECCCCCEEE
Confidence 9995 556777775321 134557889999988777788999994 566665544321 2 23334444 444444
Q ss_pred EeCCCCCeEEEEeC
Q 023864 251 NVWQVWPCIPYAYL 264 (276)
Q Consensus 251 Nvw~s~d~I~vIDp 264 (276)
..-.. ..|.+-|.
T Consensus 443 ~~~~d-~~v~~w~~ 455 (577)
T 2ymu_A 443 SASDD-KTVKLWNR 455 (577)
T ss_dssp EEETT-SEEEEEET
T ss_pred EEcCC-CEEEEEEC
Confidence 44344 55666664
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.67 E-value=0.0026 Score=62.91 Aligned_cols=77 Identities=19% Similarity=0.221 Sum_probs=61.3
Q ss_pred CCEEEEEeCCCCcEEEEEecCCCCeeE--EeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeC--CEeeeeeeeeEE-
Q 023864 169 QKTGFIYDQNNLNKLEEFTHQMKDGWG--LATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--GREVRNLNELEF- 243 (276)
Q Consensus 169 ~~~v~V~D~~tlk~i~~~~~~~~EGWG--LT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~--g~pv~~lNELE~- 243 (276)
.+.+..+|++|.+++-+++.+ ...|+ ++..|..+|+.+.+..|+.+|.+|++++-+..+... +.|+. |
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~------y~ 537 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPIT------WE 537 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE------EE
T ss_pred cceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceE------EE
Confidence 478899999999999998875 23444 777888999988889999999999999998888642 23433 4
Q ss_pred ECCEEEEEe
Q 023864 244 IKGEVWANV 252 (276)
Q Consensus 244 idG~lyANv 252 (276)
.||++|+.+
T Consensus 538 ~~G~qYv~~ 546 (582)
T 1flg_A 538 QDGEQYLGV 546 (582)
T ss_dssp ETTEEEEEE
T ss_pred ECCEEEEEE
Confidence 699988775
No 255
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.66 E-value=0.00091 Score=61.08 Aligned_cols=122 Identities=11% Similarity=0.078 Sum_probs=85.4
Q ss_pred CCCceEEEEecCC-EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe-eCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW-LQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg-~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw-k~~~v~V~D~~tlk 181 (276)
...+..+.|++++ .++.++|.-.+..|+.||+.+|+..............-....++.++...- .++.+.+||..+.+
T Consensus 276 ~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~ 355 (420)
T 4gga_A 276 QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 355 (420)
T ss_dssp SSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred CCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc
Confidence 4556788998864 455444323567899999999999888877665443333334567776664 67999999999999
Q ss_pred EEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEE
Q 023864 182 KLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRK 225 (276)
Q Consensus 182 ~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~ 225 (276)
++.++.--.. -...+++||+.|+....+.+|.++|..+....++
T Consensus 356 ~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 356 KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 9999862111 2334678999888766678899999876654433
No 256
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.65 E-value=0.0032 Score=59.66 Aligned_cols=150 Identities=15% Similarity=0.160 Sum_probs=97.3
Q ss_pred EEEEcCCCCCCeEEEE--eCCCCcEEEEe----ecC---CCceEEEEEE--e--CCEEEE-EEeeCCEEEEEeC------
Q 023864 118 LFESTGLYGRSSVRRV--ALETGKVEAIN----QME---GSYFGEGLTL--L--GEKLFQ-VTWLQKTGFIYDQ------ 177 (276)
Q Consensus 118 LyeStG~yg~S~I~~i--Dl~tgkv~~~~----~l~---~~~FgEGit~--~--g~~Lyq-lTwk~~~v~V~D~------ 177 (276)
+|.|.-.-|.++|+.| |++++++..-. +++ ..++ |+++ . .+++|+ ++-+++.+..|+.
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~py--Glcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g 166 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVY--GFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG 166 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCC--CEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS
T ss_pred EEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCee--EEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC
Confidence 4665541228999998 66788753332 222 3444 6777 3 244433 3556688888776
Q ss_pred -CCCcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEc--CCC---CcEEEEEEeeeCCEeeeeeeeeEEE-C----
Q 023864 178 -NNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQID--PQT---LKVIRKDIVRYKGREVRNLNELEFI-K---- 245 (276)
Q Consensus 178 -~tlk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viD--p~t---~~vi~~I~V~~~g~pv~~lNELE~i-d---- 245 (276)
.+.+++++|+.+ .+||+.+.+..++||+++-..-|+.+| |++ .+++..+.. +.-...+.-|.++ .
T Consensus 167 ~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~---g~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 167 YISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG---RHLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS---SSBCSCEEEEEEEECGGGC
T ss_pred cccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecC---CccccCcceEEEEecCCCC
Confidence 355778899876 678888988899999999777899999 444 555544322 2222133344443 2
Q ss_pred CEEEEEeCCCCCeEEEEeCC-CCcEEEEEE
Q 023864 246 GEVWANVWQVWPCIPYAYLQ-AFGSSLVYV 274 (276)
Q Consensus 246 G~lyANvw~s~d~I~vIDp~-T~~v~l~~~ 274 (276)
|+|+|.+=.. |...++|.+ +.+ .++.+
T Consensus 244 gyLivSsQG~-~s~~Vydr~~~~~-~vg~f 271 (355)
T 3amr_A 244 GYLMASSQGN-SSYAIYDRQGKNK-YVADF 271 (355)
T ss_dssp EEEEEEEGGG-TEEEEEESSTTCC-EEEEE
T ss_pred EEEEEEcCCC-CEEEEEECCCCCc-EEEEE
Confidence 5899999777 999999997 544 44543
No 257
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.64 E-value=0.00076 Score=64.32 Aligned_cols=146 Identities=14% Similarity=0.184 Sum_probs=87.8
Q ss_pred EEEEecCC--EEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC---CEEEEEeCCCCcEE
Q 023864 109 GLLYAEND--TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ---KTGFIYDQNNLNKL 183 (276)
Q Consensus 109 GL~~~~dg--~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~---~~v~V~D~~tlk~i 183 (276)
...+++|| .+|.+.. .+.+..||+++|+......-+. +.--+..+|..|+...... ..++++|.++.+..
T Consensus 114 ~~~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEEEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred eeeeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 45666665 4565433 3445589999998765544443 4445667788888666652 56999999887754
Q ss_pred EEEecCC--CCeeEEeeCCCEEEEECCC--ceEEEEcCCCCcEEEEEEeeeCCEeeeeee--eeE---EE-CCEEEEEeC
Q 023864 184 EEFTHQM--KDGWGLATDGKVLFGSDGS--SMLYQIDPQTLKVIRKDIVRYKGREVRNLN--ELE---FI-KGEVWANVW 253 (276)
Q Consensus 184 ~~~~~~~--~EGWGLT~Dg~~L~vSDGS--~~L~viDp~t~~vi~~I~V~~~g~pv~~lN--ELE---~i-dG~lyANvw 253 (276)
++.-.. .....++|||+.|+.++.. .+|+++|+++.+.. + +......+..+. ++. |. ||++|+...
T Consensus 189 -~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 189 -VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE--D-LELPSKDFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp -EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE--E-CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred -EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE--E-ccCCCcChhhhhhccccceeEcCCCcEEEEEE
Confidence 443210 1233478999999987744 49999999998876 2 222111111110 111 33 667776665
Q ss_pred CCCCeEEEEeC
Q 023864 254 QVWPCIPYAYL 264 (276)
Q Consensus 254 ~s~d~I~vIDp 264 (276)
.. ..+.+.+.
T Consensus 265 ~~-g~~~l~~~ 274 (582)
T 3o4h_A 265 RE-GRSAVFID 274 (582)
T ss_dssp ET-TEEEEEET
T ss_pred cC-CcEEEEEE
Confidence 55 55655554
No 258
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.64 E-value=0.00031 Score=68.54 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=71.9
Q ss_pred ceEEEEecCCEEEEEcCC-CC---CCeEEEEeCCCCcEEEEeecCCC-------------------------ceEEEEEE
Q 023864 107 TQGLLYAENDTLFESTGL-YG---RSSVRRVALETGKVEAINQMEGS-------------------------YFGEGLTL 157 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~-yg---~S~I~~iDl~tgkv~~~~~l~~~-------------------------~FgEGit~ 157 (276)
...+.|+|||+.+.+++. -| ...|..||+++|+.......... ...-.+..
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 468999999874433331 12 34899999999987666543211 12122233
Q ss_pred eCCEEEEEEeeCCEEEEEeCCCCc--EEEEEecC--CCCeeEEeeCCCEEEE-ECCCceEEEEcCCCCcEEE
Q 023864 158 LGEKLFQVTWLQKTGFIYDQNNLN--KLEEFTHQ--MKDGWGLATDGKVLFG-SDGSSMLYQIDPQTLKVIR 224 (276)
Q Consensus 158 ~g~~LyqlTwk~~~v~V~D~~tlk--~i~~~~~~--~~EGWGLT~Dg~~L~v-SDGS~~L~viDp~t~~vi~ 224 (276)
++++|+.... +.++++|.++.+ .+.++... ......++|||++|.. +| ++|+++|.++.+..+
T Consensus 119 Dg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 119 DAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQ 186 (741)
T ss_dssp TSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEE
T ss_pred CCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEE
Confidence 4556666654 999999998872 22333221 1234458899997654 55 489999999987653
No 259
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.64 E-value=0.00097 Score=61.34 Aligned_cols=169 Identities=16% Similarity=0.091 Sum_probs=106.2
Q ss_pred eeEEEEEEecCCCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCC----------CcEEEEeecC-CCceEEEEEEeC
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALET----------GKVEAINQME-GSYFGEGLTLLG 159 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~t----------gkv~~~~~l~-~~~FgEGit~~g 159 (276)
.++++..++|..... .+.|+++ +.++.+++ ....|+.||+.+ ++......-. ...+ ++++..
T Consensus 118 ~~~~~~~~~h~~~v~--~l~~~p~~~~~lat~~--~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~--~l~~~~ 191 (430)
T 2xyi_A 118 KIEIEIKINHEGEVN--RARYMPQNACVIATKT--PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY--GLSWNP 191 (430)
T ss_dssp CEEEEEEEEESSCCS--EEEEETTEEEEEEEEC--SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC--CEEECT
T ss_pred ceEEEEEEcCCCcEE--EEEECCCCCcEEEEEC--CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE--EEEeCC
Confidence 566788899965544 8999997 56776655 567899999986 3443333222 2223 456553
Q ss_pred --CEEEEEEeeCCEEEEEeCCCCcE-------EEEEe-cC-CCCeeEEeeCCCEEEEE-CCCceEEEEcCCCC---cEEE
Q 023864 160 --EKLFQVTWLQKTGFIYDQNNLNK-------LEEFT-HQ-MKDGWGLATDGKVLFGS-DGSSMLYQIDPQTL---KVIR 224 (276)
Q Consensus 160 --~~LyqlTwk~~~v~V~D~~tlk~-------i~~~~-~~-~~EGWGLT~Dg~~L~vS-DGS~~L~viDp~t~---~vi~ 224 (276)
..+++..-.++.+.+||..+.+. ...+. .. .-....+++++..++++ .+...|.++|..+. +.+.
T Consensus 192 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~ 271 (430)
T 2xyi_A 192 NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH 271 (430)
T ss_dssp TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSE
T ss_pred CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCccee
Confidence 33677777899999999987322 23332 11 11334456655555554 47899999999887 3444
Q ss_pred EEEeeeCCEeeeeeeeeEEEC-C-EEEEEeCCCCCeEEEEeCCCCcEEEE
Q 023864 225 KDIVRYKGREVRNLNELEFIK-G-EVWANVWQVWPCIPYAYLQAFGSSLV 272 (276)
Q Consensus 225 ~I~V~~~g~pv~~lNELE~id-G-~lyANvw~s~d~I~vIDp~T~~v~l~ 272 (276)
.+... .. .++-+.+.. | .++|..-.+ ..|.+.|..+.+..+.
T Consensus 272 ~~~~~--~~---~v~~i~~~p~~~~~l~tg~~d-g~v~vwd~~~~~~~~~ 315 (430)
T 2xyi_A 272 TVDAH--TA---EVNCLSFNPYSEFILATGSAD-KTVALWDLRNLKLKLH 315 (430)
T ss_dssp EEECC--SS---CEEEEEECSSCTTEEEEEETT-SEEEEEETTCTTSCSE
T ss_pred EeecC--CC---CeEEEEeCCCCCCEEEEEeCC-CeEEEEeCCCCCCCeE
Confidence 44322 12 345556653 4 477777677 8999999988554333
No 260
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.61 E-value=0.0019 Score=64.04 Aligned_cols=157 Identities=10% Similarity=0.061 Sum_probs=93.5
Q ss_pred CceEEEEecCCE--EEE-EcCCCCCCeEEEEeCCCCcEEEEeecCCC-ceEEEEEEeCCEEEEEEee------------C
Q 023864 106 FTQGLLYAENDT--LFE-STGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLGEKLFQVTWL------------Q 169 (276)
Q Consensus 106 FTQGL~~~~dg~--Lye-StG~yg~S~I~~iDl~tgkv~~~~~l~~~-~FgEGit~~g~~LyqlTwk------------~ 169 (276)
...|+.|+|||+ +|. +.+.-....|+++|++||+.+.. .++.. ..+-..+ +++.||..... .
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 357889999986 332 33322347899999999997554 22221 2233455 67788888755 3
Q ss_pred CEEEEEeCCCCcEEEEEecCCCC-------eeEEeeCCCEEEEEC--C--CceEEEEcCCCCc-EEEEEEeeeCCEeeee
Q 023864 170 KTGFIYDQNNLNKLEEFTHQMKD-------GWGLATDGKVLFGSD--G--SSMLYQIDPQTLK-VIRKDIVRYKGREVRN 237 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~~E-------GWGLT~Dg~~L~vSD--G--S~~L~viDp~t~~-vi~~I~V~~~g~pv~~ 237 (276)
.++++++..|-+...+.=+..++ +...++||++|+++- + ++.|+++|.++.+ ..+++....++.. .
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~--~ 285 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV--S 285 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE--E
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE--E
Confidence 57999998876532211111111 334789999987733 2 3599999987763 2334444332211 1
Q ss_pred eeeeEEECCEEEEEeCCC--CCeEEEEeCCCCc
Q 023864 238 LNELEFIKGEVWANVWQV--WPCIPYAYLQAFG 268 (276)
Q Consensus 238 lNELE~idG~lyANvw~s--~d~I~vIDp~T~~ 268 (276)
. ....++++|+--... ...|.++|.++++
T Consensus 286 ~--~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 286 L--VDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp E--EEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred E--EeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 1 234567777544332 1479999998864
No 261
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.60 E-value=0.0027 Score=56.04 Aligned_cols=153 Identities=10% Similarity=0.040 Sum_probs=99.8
Q ss_pred EEEEecCCEEEEEcCCC-------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe-----eCCEEEEEe
Q 023864 109 GLLYAENDTLFESTGLY-------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW-----LQKTGFIYD 176 (276)
Q Consensus 109 GL~~~~dg~LyeStG~y-------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw-----k~~~v~V~D 176 (276)
+++.. +++||.-.|.. ..+.+.+||+.+++-....+++....+-+++..+++||++-= ..+.+.+||
T Consensus 65 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 143 (308)
T 1zgk_A 65 AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYE 143 (308)
T ss_dssp EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEE
T ss_pred eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEEC
Confidence 55555 58899876641 125799999999987666667755555677888999999832 236799999
Q ss_pred CCCCcE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEE
Q 023864 177 QNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (276)
Q Consensus 177 ~~tlk~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~l 248 (276)
+.+.+- +..++.+ ..+-+.+..++.||+--| .+.++.+|+++.+-...-.. ...+. ---+...+++|
T Consensus 144 ~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~---~~~~~~~~~~i 218 (308)
T 1zgk_A 144 PERDEWHLVAPMLTR-RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM-NTIRS---GAGVCVLHNCI 218 (308)
T ss_dssp TTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC-SSCCB---SCEEEEETTEE
T ss_pred CCCCeEeECCCCCcc-ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC-CCccc---cceEEEECCEE
Confidence 987654 3333433 355566655778888544 46899999999866432111 11111 11234568888
Q ss_pred EEEeCC-----CCCeEEEEeCCCCc
Q 023864 249 WANVWQ-----VWPCIPYAYLQAFG 268 (276)
Q Consensus 249 yANvw~-----s~d~I~vIDp~T~~ 268 (276)
|+-=.. . +.+.+.|+++++
T Consensus 219 yv~GG~~~~~~~-~~v~~yd~~~~~ 242 (308)
T 1zgk_A 219 YAAGGYDGQDQL-NSVERYDVETET 242 (308)
T ss_dssp EEECCBCSSSBC-CCEEEEETTTTE
T ss_pred EEEeCCCCCCcc-ceEEEEeCCCCc
Confidence 864322 4 679999999864
No 262
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.60 E-value=0.00041 Score=67.27 Aligned_cols=162 Identities=9% Similarity=-0.058 Sum_probs=92.1
Q ss_pred ceEEEEecCCEEEEEcCCCC-------CCeEEEEeCCCCcEEEEeecCCC---ceEEEEEEeCCEEEEEEeeCCEEEEEe
Q 023864 107 TQGLLYAENDTLFESTGLYG-------RSSVRRVALETGKVEAINQMEGS---YFGEGLTLLGEKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg-------~S~I~~iDl~tgkv~~~~~l~~~---~FgEGit~~g~~LyqlTwk~~~v~V~D 176 (276)
...+.|+|||+.+.++...+ ...|..||+++|+...-...... ...-.+..+|++|..+. ++.++++|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~ 140 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF--ENNIYYCA 140 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE--TTEEEEES
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE--CCeEEEEE
Confidence 56899999987333332111 37899999999986222111111 22222344566666655 37999999
Q ss_pred CCCCcEEEEEecCC-C-------------------CeeEEeeCCCEEEEEC--C--------------------------
Q 023864 177 QNNLNKLEEFTHQM-K-------------------DGWGLATDGKVLFGSD--G-------------------------- 208 (276)
Q Consensus 177 ~~tlk~i~~~~~~~-~-------------------EGWGLT~Dg~~L~vSD--G-------------------------- 208 (276)
.++.+.......+. . .+...+|||+.|+.+. +
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 99877655443220 0 2455789999876632 2
Q ss_pred ------CceEEEEcCCCCcEEEEEEeeeCCE-eeeeeeeeEEE-CCEEEEEe---CCCCCeEEEEeCCCCcEE
Q 023864 209 ------SSMLYQIDPQTLKVIRKDIVRYKGR-EVRNLNELEFI-KGEVWANV---WQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 209 ------S~~L~viDp~t~~vi~~I~V~~~g~-pv~~lNELE~i-dG~lyANv---w~s~d~I~vIDp~T~~v~ 270 (276)
..+|+++|.++.+....+....... .-..+..+.|. ||++.+.. -..+..|.++|+++++..
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 1278899988887544443221000 01133344454 67644222 112136888899998743
No 263
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.60 E-value=0.005 Score=58.71 Aligned_cols=159 Identities=10% Similarity=0.086 Sum_probs=109.3
Q ss_pred CceEEEEecCCEEEE-EcCC------------CCCCeEEEEeCCCC--cEEEEeecCC-----CceEEEEEEe-------
Q 023864 106 FTQGLLYAENDTLFE-STGL------------YGRSSVRRVALETG--KVEAINQMEG-----SYFGEGLTLL------- 158 (276)
Q Consensus 106 FTQGL~~~~dg~Lye-StG~------------yg~S~I~~iDl~tg--kv~~~~~l~~-----~~FgEGit~~------- 158 (276)
-+|++.+++.|+||+ =+|. .+.-+|..||+.|+ ++++++.+|+ .-|-..++++
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 457889998899985 3453 34568999999999 9999999883 3355678888
Q ss_pred --CCEEEEEEeeCCEEEEEeCCCCcEEEEE------------ec-------C-CCCeeEEeeC----CCEEEEEC-CCce
Q 023864 159 --GEKLFQVTWLQKTGFIYDQNNLNKLEEF------------TH-------Q-MKDGWGLATD----GKVLFGSD-GSSM 211 (276)
Q Consensus 159 --g~~LyqlTwk~~~v~V~D~~tlk~i~~~------------~~-------~-~~EGWGLT~D----g~~L~vSD-GS~~ 211 (276)
+..+|+.+-...-+.|||.++.+--+-. .+ . .-.|.+|++| +++||-+- .|.+
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 4689999988899999998876543222 11 1 2356678888 78998877 5668
Q ss_pred EEEEcCCC---CcEEEEE-EeeeCCEeeeeeeeeEEE--CCEEEEEeCCCCCeEEEEeCCC
Q 023864 212 LYQIDPQT---LKVIRKD-IVRYKGREVRNLNELEFI--KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 212 L~viDp~t---~~vi~~I-~V~~~g~pv~~lNELE~i--dG~lyANvw~s~d~I~vIDp~T 266 (276)
++-+..+- ......+ .+++.| +...--++.++ +|.||...-.. +.|.+.|+++
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~kg-~~s~~~~~~~D~~~G~ly~~~~~~-~aI~~w~~~~ 306 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGNRG-KYNDAIALAYDPKTKVIFFAEANT-KQVSCWNTQK 306 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEECC-TTCCEEEEEECTTTCEEEEEESSS-SEEEEEETTS
T ss_pred EEEEEHHHhhCcchhhceEEeeecC-CCCCcceEEEeCCCCeEEEEeccC-CeEEEEeCCC
Confidence 99886221 1111111 223322 11223345564 58899998888 9999999986
No 264
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.60 E-value=0.00045 Score=68.97 Aligned_cols=112 Identities=11% Similarity=0.010 Sum_probs=81.9
Q ss_pred EEeCCEEEEEEeeCCEEEEEeC-CCCcEEEEEecCCCC-----------eeEEee--CCCE----EEEECCCceEEEEcC
Q 023864 156 TLLGEKLFQVTWLQKTGFIYDQ-NNLNKLEEFTHQMKD-----------GWGLAT--DGKV----LFGSDGSSMLYQIDP 217 (276)
Q Consensus 156 t~~g~~LyqlTwk~~~v~V~D~-~tlk~i~~~~~~~~E-----------GWGLT~--Dg~~----L~vSDGS~~L~viDp 217 (276)
.+.++++|+.+..++.++.+|+ +|.+++-++..+... ..|++. ++.. +|+.....+|+-+|+
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa 138 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNA 138 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEET
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEEC
Confidence 4568999999976789999999 999999998754211 123444 5555 899887889999999
Q ss_pred CCCcEEEEEEeeeC--CEeeeeeeeeEEECCEEEEEeC-----CCCCeEEEEeCCCCcEE
Q 023864 218 QTLKVIRKDIVRYK--GREVRNLNELEFIKGEVWANVW-----QVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 218 ~t~~vi~~I~V~~~--g~pv~~lNELE~idG~lyANvw-----~s~d~I~vIDp~T~~v~ 270 (276)
+|++++=+..+... +..+ ..--.+.+|.||+... .. ..|..+|++||++.
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~--~ssP~v~~g~V~vg~~g~e~g~~-g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTL--TIAPYVVKDKVIIGSSGAELGVR-GYLTAYDVKTGEQV 195 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBC--CSCCEEETTEEEECCBCGGGTCC-CEEEEEETTTCCEE
T ss_pred CCCCEEEeecCCCCCcccee--ecCCEEECCEEEEEecccccCCC-CeEEEEECCCCcEE
Confidence 99999877666431 1111 1112356899998775 35 79999999999875
No 265
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.59 E-value=0.0039 Score=55.14 Aligned_cols=153 Identities=16% Similarity=0.100 Sum_probs=101.0
Q ss_pred EEEEecCCEEEEEcCCC--C---CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEee------CCEEEEEeC
Q 023864 109 GLLYAENDTLFESTGLY--G---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL------QKTGFIYDQ 177 (276)
Q Consensus 109 GL~~~~dg~LyeStG~y--g---~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk------~~~v~V~D~ 177 (276)
++... +++||.-.|.. + .+.+.+||+++++-....++|...++-+++..+++||++-=. .+.+.+||+
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 55555 58999877742 1 267999999999877766788766777888899999998643 356999999
Q ss_pred CCCcE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEE
Q 023864 178 NNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVW 249 (276)
Q Consensus 178 ~tlk~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~ly 249 (276)
.+.+- +...+.+ ..+.+++.-++.||+--| .+.++++|+++.+-...-.. ...+.- --+...+|+||
T Consensus 183 ~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~---~~~~~~~~~i~ 257 (318)
T 2woz_A 183 KKGDWKDLAPMKTP-RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF-PQERSS---ISLVSLAGSLY 257 (318)
T ss_dssp TTTEEEEECCCSSC-CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC-SSCCBS---CEEEEETTEEE
T ss_pred CCCEEEECCCCCCC-cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC-CCcccc---eEEEEECCEEE
Confidence 87654 3333333 345565555667777544 36789999999875432111 111111 12446688888
Q ss_pred EEeC--------------CCCCeEEEEeCCCCc
Q 023864 250 ANVW--------------QVWPCIPYAYLQAFG 268 (276)
Q Consensus 250 ANvw--------------~s~d~I~vIDp~T~~ 268 (276)
+-=. .. +.|.+.|+++++
T Consensus 258 v~GG~~~~~~~~~~~~~~~~-~~v~~yd~~~~~ 289 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEV-NDIWKYEDDKKE 289 (318)
T ss_dssp EECCBCCBC----CCBCCBC-CCEEEEETTTTE
T ss_pred EECCeeccCCCCceecccee-eeEEEEeCCCCE
Confidence 6421 24 679999999864
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.57 E-value=0.00039 Score=68.78 Aligned_cols=113 Identities=14% Similarity=0.091 Sum_probs=80.9
Q ss_pred EEeCCEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCC---------eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEE
Q 023864 156 TLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD---------GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKD 226 (276)
Q Consensus 156 t~~g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~E---------GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I 226 (276)
.+.++++|+.+..++ ++.+|++|.+++-++....+. ..|++.++..+|+.....+|+-+|++|++++=+.
T Consensus 65 ~v~~g~vyv~~~~~~-v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 65 IVSDGVIYVTASYSR-LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp EEETTEEEEEETTTE-EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCC-EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeee
Confidence 467999999998555 999999999999999765221 1355667888999777789999999999998777
Q ss_pred EeeeCCEeeeeeeeeEEECC------EEEEEeC-----CCCCeEEEEeCCCCcEE
Q 023864 227 IVRYKGREVRNLNELEFIKG------EVWANVW-----QVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 227 ~V~~~g~pv~~lNELE~idG------~lyANvw-----~s~d~I~vIDp~T~~v~ 270 (276)
.+............-...++ .||+... .. ..|..+|++||++.
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~-g~v~alD~~tG~~~ 197 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVV-GRLFARDPDTGEEI 197 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCB-CEEEEECTTTCCEE
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCC-CEEEEEECCCCCEE
Confidence 66531000000111123456 8988763 25 78999999998865
No 267
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.55 E-value=0.0048 Score=60.86 Aligned_cols=158 Identities=10% Similarity=-0.008 Sum_probs=94.9
Q ss_pred eEEEEecCCE-EEEEcCCCC-------------CCeEEEEeCCCCcEE--EEeecCC-C--ceEEEEEEeCCEEEEEEee
Q 023864 108 QGLLYAENDT-LFESTGLYG-------------RSSVRRVALETGKVE--AINQMEG-S--YFGEGLTLLGEKLFQVTWL 168 (276)
Q Consensus 108 QGL~~~~dg~-LyeStG~yg-------------~S~I~~iDl~tgkv~--~~~~l~~-~--~FgEGit~~g~~LyqlTwk 168 (276)
.++.|+|||+ ||.++..-. ...|.++++.+++.. .....+. . .++-.++.+++.|+...+.
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 5899999974 666554322 346999999998621 1112221 2 3344444456778777763
Q ss_pred ----CCEEEEEeCCC------Cc-EEEEEecC-CCCeeEEeeCCCEEEE-ECC---CceEEEEcCCCCcE--EEEEEeee
Q 023864 169 ----QKTGFIYDQNN------LN-KLEEFTHQ-MKDGWGLATDGKVLFG-SDG---SSMLYQIDPQTLKV--IRKDIVRY 230 (276)
Q Consensus 169 ----~~~v~V~D~~t------lk-~i~~~~~~-~~EGWGLT~Dg~~L~v-SDG---S~~L~viDp~t~~v--i~~I~V~~ 230 (276)
...++++|.++ .+ .+..+... ......+++||+.||+ ++. ..+|+.+|.++.+. .+.+.-..
T Consensus 254 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred cCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 56899999876 32 34555432 1233347899998876 552 34799999988742 23332222
Q ss_pred CCEeeeeeeeeEEE-CCEEEEEeCCC-CCeEEEEeCCCCc
Q 023864 231 KGREVRNLNELEFI-KGEVWANVWQV-WPCIPYAYLQAFG 268 (276)
Q Consensus 231 ~g~pv~~lNELE~i-dG~lyANvw~s-~d~I~vIDp~T~~ 268 (276)
+. ..++.+.+. ++++++..-.. ...|.++|+++|+
T Consensus 334 ~~---~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 334 EK---DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp SS---CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CC---CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 11 234556677 67777654322 0368899998766
No 268
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.54 E-value=0.0016 Score=59.96 Aligned_cols=162 Identities=10% Similarity=0.031 Sum_probs=95.6
Q ss_pred ceeeeEEEEEEecCCCCCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEe-ecC-----CCceEEEEEEe---
Q 023864 89 SIYTIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAIN-QME-----GSYFGEGLTLL--- 158 (276)
Q Consensus 89 ~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~-~l~-----~~~FgEGit~~--- 158 (276)
+-++++++.+-- ..+ .+|+|++||+ ||++.- ...|+++|.+ |+....+ .++ ..--..||+++
T Consensus 6 ~g~~~~~va~~l--~~P--~~i~~~pdG~~l~V~e~---~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf 77 (353)
T 2g8s_A 6 ATVNVEVLQDKL--DHP--WALAFLPDNHGMLITLR---GGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDF 77 (353)
T ss_dssp CCSEEEEEEEEE--SSE--EEEEECSTTCCEEEEET---TTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTH
T ss_pred CCcEEEEEECCC--CCc--EEEEEcCCCCEEEEEeC---CceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCC
Confidence 335667776621 123 4999999999 998643 3689999964 4432111 122 11123688987
Q ss_pred --CCEEEEEEee-------CCEEEEEeCCCC----cEEEEE----ec---C--CCCeeEEeeCCCEEEEECCC-------
Q 023864 159 --GEKLFQVTWL-------QKTGFIYDQNNL----NKLEEF----TH---Q--MKDGWGLATDGKVLFGSDGS------- 209 (276)
Q Consensus 159 --g~~LyqlTwk-------~~~v~V~D~~tl----k~i~~~----~~---~--~~EGWGLT~Dg~~L~vSDGS------- 209 (276)
+++||+.... .+++..++.+.- ...+.+ +. . .+.+..+.+|| .||++.|+
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTA 156 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGG
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCcc
Confidence 6899999765 457887765421 222222 21 1 12345567888 89999764
Q ss_pred -------ceEEEEcCCCCc------------EEEEEEeeeCCEeeeeeeeeEEE--CCEEEEEeCCC--CCeEEEEeC
Q 023864 210 -------SMLYQIDPQTLK------------VIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQV--WPCIPYAYL 264 (276)
Q Consensus 210 -------~~L~viDp~t~~------------vi~~I~V~~~g~pv~~lNELE~i--dG~lyANvw~s--~d~I~vIDp 264 (276)
.+|..||++.-- ....+.. -+.+++.|.+. +|+||+..-.. ++.|-+|.+
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~-----G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~ 229 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSY-----GIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK 229 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEE-----CCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEE-----cCcCccceEEECCCCCEEEEecCCCCCcEEeEecc
Confidence 278888876310 0001111 23478888888 58999766553 146776654
No 269
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.53 E-value=0.00055 Score=70.77 Aligned_cols=150 Identities=10% Similarity=0.000 Sum_probs=94.2
Q ss_pred CceEEEEe-cCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEE-eCCEEEEEEeeCCEEE-EEeCCCCc
Q 023864 106 FTQGLLYA-ENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL-LGEKLFQVTWLQKTGF-IYDQNNLN 181 (276)
Q Consensus 106 FTQGL~~~-~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~-~g~~LyqlTwk~~~v~-V~D~~tlk 181 (276)
....+.|+ |||+ |..+. ...|..+|.++++......-+. .-..++++ ++++|+.+.. ++.++ ++|.++.+
T Consensus 297 ~v~~~~~S~pdG~~la~~~----~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~sdg~~l~~~s~-~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS----RGQAFIQDVSGTYVLKVPEPLR-IRYVRRGGDTKVAFIHGTR-EGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE----TTEEEEECTTSSBEEECSCCSC-EEEEEECSSSEEEEEEEET-TEEEEEEEETTTCC
T ss_pred ccceeeecCCCCCEEEEEE----cCEEEEEcCCCCceEEccCCCc-ceEEeeeEcCCCeEEEEEC-CCceEEEEECCCCC
Confidence 45789999 9986 44332 4689999999998654222122 11223333 3446666665 67888 89988765
Q ss_pred EEEEEe-cC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCE-E-EEEe----
Q 023864 182 KLEEFT-HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGE-V-WANV---- 252 (276)
Q Consensus 182 ~i~~~~-~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~-l-yANv---- 252 (276)
.. .+. .. ......+++||++|+.+.....|+++|+++.++........ . .+..+.|. ||+ | |+..
T Consensus 371 ~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~--~---~v~~~~~SpDG~~la~~~~~~~~ 444 (1045)
T 1k32_A 371 AE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE--A---MITDFTISDNSRFIAYGFPLKHG 444 (1045)
T ss_dssp EE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--S---CCCCEEECTTSCEEEEEEEECSS
T ss_pred ce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC--C---CccceEECCCCCeEEEEecCccc
Confidence 43 232 11 12345578999999887777899999999998765543221 1 22344565 664 3 3333
Q ss_pred ----CCCCCeEEEEeCCCCc
Q 023864 253 ----WQVWPCIPYAYLQAFG 268 (276)
Q Consensus 253 ----w~s~d~I~vIDp~T~~ 268 (276)
|.. ..|.++|.++++
T Consensus 445 ~~~~~~~-~~i~l~d~~~g~ 463 (1045)
T 1k32_A 445 ETDGYVM-QAIHVYDMEGRK 463 (1045)
T ss_dssp TTCSCCE-EEEEEEETTTTE
T ss_pred cccCCCC-CeEEEEECCCCc
Confidence 334 589999999866
No 270
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.48 E-value=0.0028 Score=56.02 Aligned_cols=153 Identities=13% Similarity=0.032 Sum_probs=99.2
Q ss_pred EEEEecCCEEEEEcCC------CCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEee------CCEEEEEe
Q 023864 109 GLLYAENDTLFESTGL------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL------QKTGFIYD 176 (276)
Q Consensus 109 GL~~~~dg~LyeStG~------yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk------~~~v~V~D 176 (276)
++... +++||.-.|. ...+.+.+||+.+++-....++|...++-+++..+++||++-=. .+.+.+||
T Consensus 93 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 171 (315)
T 4asc_A 93 GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD 171 (315)
T ss_dssp EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEE
T ss_pred eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEe
Confidence 55555 5899987772 12367999999999876666777766777788899999999755 36799999
Q ss_pred CCCCcE--EEEEecCCCCeeEEeeCCCEEEEECC------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEE
Q 023864 177 QNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (276)
Q Consensus 177 ~~tlk~--i~~~~~~~~EGWGLT~Dg~~L~vSDG------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~l 248 (276)
+.+.+- +...+.+ ..+-+.+.-+..||+--| .+.++++|+++.+-...-.. ...+.-. -+...+|+|
T Consensus 172 ~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~---~~~~~~~~l 246 (315)
T 4asc_A 172 PKKFEWKELAPMQTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF-PQERSSL---SLVSLVGTL 246 (315)
T ss_dssp TTTTEEEECCCCSSC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC-SSCCBSC---EEEEETTEE
T ss_pred CCCCeEEECCCCCCc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCC-CCcccce---eEEEECCEE
Confidence 987653 3333433 345555555667777543 35799999999865432111 1111111 233557777
Q ss_pred EEEeC--------------CCCCeEEEEeCCCCc
Q 023864 249 WANVW--------------QVWPCIPYAYLQAFG 268 (276)
Q Consensus 249 yANvw--------------~s~d~I~vIDp~T~~ 268 (276)
|+-=. .. +.|.+.||++++
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~-~~v~~yd~~~~~ 279 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTEL-NDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEE-EEEEEEETTTTE
T ss_pred EEECCccccCcCCcccccccc-CcEEEecCCCCh
Confidence 75321 13 568899999864
No 271
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.48 E-value=0.0025 Score=53.81 Aligned_cols=124 Identities=6% Similarity=-0.058 Sum_probs=74.3
Q ss_pred EEEEEEecCCCCCceEEEEecC--CEEEEEcCCCCCCeEEEEeCCCCcEEEEeec------------CCCceEEEEEEe-
Q 023864 94 QVVNEFPHDPRAFTQGLLYAEN--DTLFESTGLYGRSSVRRVALETGKVEAINQM------------EGSYFGEGLTLL- 158 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~d--g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l------------~~~~FgEGit~~- 158 (276)
+.+.++.. .......+.|+++ +.++.+++ .+..|+.||+.+++.+....+ +...-...+++.
T Consensus 101 ~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 177 (351)
T 3f3f_A 101 NKLCTLND-SKGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP 177 (351)
T ss_dssp EEEEEECC-CSSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECC
T ss_pred ceeeeecc-cCCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEecc
Confidence 45666643 3455679999998 87777666 678999999998874332211 111111233443
Q ss_pred ---CCEEEEEEeeCCEEEEEeCCCCcE--EEEEecCCC--CeeEEeeCC----CEEEEECCCceEEEEcCCCC
Q 023864 159 ---GEKLFQVTWLQKTGFIYDQNNLNK--LEEFTHQMK--DGWGLATDG----KVLFGSDGSSMLYQIDPQTL 220 (276)
Q Consensus 159 ---g~~LyqlTwk~~~v~V~D~~tlk~--i~~~~~~~~--EGWGLT~Dg----~~L~vSDGS~~L~viDp~t~ 220 (276)
++.++.+.-.++.+.+++..+.+. +.++.-... ....+.+|| +.|+....+..|.++|..+.
T Consensus 178 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 178 SRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred CCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 245555666667776677666654 344432111 233466787 55666656788999997764
No 272
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.47 E-value=0.006 Score=53.17 Aligned_cols=110 Identities=16% Similarity=0.068 Sum_probs=72.2
Q ss_pred ceEEEEecCCE-EEEEcCCC--CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEee-------------
Q 023864 107 TQGLLYAENDT-LFESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL------------- 168 (276)
Q Consensus 107 TQGL~~~~dg~-LyeStG~y--g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk------------- 168 (276)
...+.|+|||+ |+.....- +...|..+|+++|+.......+. ..++++. +++|+.....
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 45789999985 44322211 45679999999998765555443 4456664 5677777643
Q ss_pred -------------CCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEECC---------CceEEEEcCCCCcE
Q 023864 169 -------------QKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDG---------SSMLYQIDPQTLKV 222 (276)
Q Consensus 169 -------------~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDG---------S~~L~viDp~t~~v 222 (276)
...++++|.++.+.+..+..+......+++|| .+|+++. ...|+.+| +.+.
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~ 210 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE 210 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce
Confidence 36799999998876444432223566688999 7777642 34799999 5554
No 273
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.47 E-value=0.00025 Score=62.65 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=94.8
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc---EEEEeecCCCceEEEEEEeC-CEEEEEEeeCCEEEEEeCCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK---VEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNN 179 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk---v~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~t 179 (276)
..-...+.|++|+.++.+++ .+..|+.||+++++ +.....-+..-.-..+++.. +++....-.++.+.+||..+
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECC
T ss_pred CCceEEEEECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEe
Confidence 34457999999987666666 57789999999987 34444432233344666653 45555566789999999853
Q ss_pred ------------------CcEEEEEecC-CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcE----EEEEEeeeCCEeee
Q 023864 180 ------------------LNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV----IRKDIVRYKGREVR 236 (276)
Q Consensus 180 ------------------lk~i~~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~v----i~~I~V~~~g~pv~ 236 (276)
.+.+.++... .-....+++||+.|+.......|.++|..+.+. +.++.-.. .
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~--- 252 (377)
T 3dwl_C 178 RDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ--L--- 252 (377)
T ss_dssp SSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS--S---
T ss_pred cccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC--C---
Confidence 3344444221 012234678999998887788999999998876 33333221 2
Q ss_pred eeeeeEEE-CCEEEEEeCCCCCeEEEEeCCC
Q 023864 237 NLNELEFI-KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 237 ~lNELE~i-dG~lyANvw~s~d~I~vIDp~T 266 (276)
.++-+.+. ||++.+.. .. +.+.+++...
T Consensus 253 ~v~~~~~s~~~~~l~~~-~~-~~~~~~~~~~ 281 (377)
T 3dwl_C 253 PLRSLLWANESAIVAAG-YN-YSPILLQGNE 281 (377)
T ss_dssp CEEEEEEEETTEEEEEE-SS-SSEEEECCCC
T ss_pred ceEEEEEcCCCCEEEEE-cC-CcEEEEEeCC
Confidence 23445565 77766665 45 7777888764
No 274
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.46 E-value=0.004 Score=59.82 Aligned_cols=113 Identities=14% Similarity=0.165 Sum_probs=68.1
Q ss_pred ceeeeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCce-------EEEEEEe---
Q 023864 89 SIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYF-------GEGLTLL--- 158 (276)
Q Consensus 89 ~~~t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~F-------gEGit~~--- 158 (276)
+-++++++.+- -..++ ||+|.+||+||++.- ....|.+++.++|+......++.... .-||+++
T Consensus 15 ~gf~~~~~a~~--l~~P~--~~a~~pdG~l~V~e~--~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 15 ENFDKKVILSN--LNKPH--ALLWGPDNQIWLTER--ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDF 88 (454)
T ss_dssp TTSCEEEEECC--CSSEE--EEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTT
T ss_pred CCeEEEEEECC--CCCce--EEEEcCCCcEEEEEc--CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCc
Confidence 33566666541 12334 999999999998743 33479999988887654444543211 1289998
Q ss_pred --CCEEEEEEee------------CCEEEEEeCCC--C-----cEE-EEEecC---CCCeeEEeeCCCEEEEECC
Q 023864 159 --GEKLFQVTWL------------QKTGFIYDQNN--L-----NKL-EEFTHQ---MKDGWGLATDGKVLFGSDG 208 (276)
Q Consensus 159 --g~~LyqlTwk------------~~~v~V~D~~t--l-----k~i-~~~~~~---~~EGWGLT~Dg~~L~vSDG 208 (276)
++.||+..-. .+.+..++.+. . +++ ..++.. .+-+..+.+|| .||++-|
T Consensus 89 ~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 89 KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred CcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 8899999864 35777776432 1 222 223322 11222355788 5999855
No 275
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.041 Score=48.53 Aligned_cols=165 Identities=7% Similarity=0.057 Sum_probs=93.1
Q ss_pred eeEEEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc--EEEEeecC-CCceEEEEEEeC-CEEEEEEe
Q 023864 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK--VEAINQME-GSYFGEGLTLLG-EKLFQVTW 167 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk--v~~~~~l~-~~~FgEGit~~g-~~LyqlTw 167 (276)
+.+.++++.. ...-...+.|+++ ++.+++ .+..|+.||+++++ .......+ ..---..+++.. +.+....-
T Consensus 3 ~~~~~~~~~~-h~~~v~~~~~s~~--~las~~--~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s 77 (330)
T 2hes_X 3 SINLIKSLKL-YKEKIWSFDFSQG--ILATGS--TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS 77 (330)
T ss_dssp CCEEEEEEEC-CSSCEEEEEEETT--EEEEEE--SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE
T ss_pred ccccceeecc-CCCceeeeccCCC--EEEEEc--CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe
Confidence 3456667653 2344568999976 555555 67899999998863 33333222 211223555543 34445555
Q ss_pred eCCEEEEEeCCC-------CcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCC----cEEEEEEeeeCCEe
Q 023864 168 LQKTGFIYDQNN-------LNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTL----KVIRKDIVRYKGRE 234 (276)
Q Consensus 168 k~~~v~V~D~~t-------lk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~----~vi~~I~V~~~g~p 234 (276)
.++++.+||..+ .+.+..+.-... ....+++||+.|.....+..|.++|..+. +.+..+.-. .
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h--~-- 153 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH--S-- 153 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC--S--
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC--C--
Confidence 689999999843 344555532111 23346789998888767788999998432 233322211 1
Q ss_pred eeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCC
Q 023864 235 VRNLNELEFI-KGEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 235 v~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T~ 267 (276)
..++.+.|. +|.+.|..-.+ ..|.+-|..++
T Consensus 154 -~~v~~v~~~p~~~~l~s~s~D-~~i~iW~~~~~ 185 (330)
T 2hes_X 154 -QDVKHVIWHPSEALLASSSYD-DTVRIWKDYDD 185 (330)
T ss_dssp -SCEEEEEECSSSSEEEEEETT-SCEEEEEEETT
T ss_pred -CceEEEEECCCCCEEEEEcCC-CeEEEEECCCC
Confidence 134445554 45555555445 66666666553
No 276
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.44 E-value=0.0013 Score=57.99 Aligned_cols=152 Identities=13% Similarity=0.066 Sum_probs=88.3
Q ss_pred ceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC-ceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEEE
Q 023864 107 TQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 107 TQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~-~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i~ 184 (276)
...+.|+|||+ |+.+...-|...|..+|+++++......-+.. .++.-...++++|+.+.. .+.++++|.++.+...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN-ELNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET-TTEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc-CCcEEEEECCCCCcEE
Confidence 45778999985 43333323667899999999986543222211 111123334567765554 4589999999887655
Q ss_pred EEecCCCCeeEE-----------------------eeCCCEEEEE-----CCCceEEEEcCCCCcEEEEEEeeeCCEeee
Q 023864 185 EFTHQMKDGWGL-----------------------ATDGKVLFGS-----DGSSMLYQIDPQTLKVIRKDIVRYKGREVR 236 (276)
Q Consensus 185 ~~~~~~~EGWGL-----------------------T~Dg~~L~vS-----DGS~~L~viDp~t~~vi~~I~V~~~g~pv~ 236 (276)
.+..+ .+|.- ++||+.+.+. ++...|+++|+++.+...... . . .
T Consensus 117 ~~~~~--~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~--~---~ 188 (396)
T 3c5m_A 117 IYTVD--EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-D--T---A 188 (396)
T ss_dssp EEECC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-E--S---S
T ss_pred EEecc--cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-C--C---c
Confidence 55433 44431 3445544332 456799999999987654332 1 1 1
Q ss_pred eeeeeEEEC--CE-E-EEEeCCCC----CeEEEEeCCCCc
Q 023864 237 NLNELEFIK--GE-V-WANVWQVW----PCIPYAYLQAFG 268 (276)
Q Consensus 237 ~lNELE~id--G~-l-yANvw~s~----d~I~vIDp~T~~ 268 (276)
.+..+.+.. |. | |+.. ..+ ..|.++|.++++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp CEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCC
T ss_pred ccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCc
Confidence 334455653 43 3 4443 221 268899987754
No 277
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.44 E-value=0.00026 Score=69.06 Aligned_cols=158 Identities=12% Similarity=0.078 Sum_probs=92.0
Q ss_pred ceEEEEecCCEEEEEcCCC-------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCC
Q 023864 107 TQGLLYAENDTLFESTGLY-------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNN 179 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~y-------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~t 179 (276)
...+.|+|||+.+..+... +...|+.+|+++|+.+....+......-.+..+|++|... .++.++++|.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~--~~~~i~~~~~~~ 139 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV--YQNNIYLKQRPG 139 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEE--ETTEEEEESSTT
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEE--ECCeEEEEeCCC
Confidence 3589999998743323211 1478999999999874323454444433444456666655 488999999988
Q ss_pred CcEEEEEecCCC---------------------CeeEEeeCCCEEEE-E-CCC---------------------------
Q 023864 180 LNKLEEFTHQMK---------------------DGWGLATDGKVLFG-S-DGS--------------------------- 209 (276)
Q Consensus 180 lk~i~~~~~~~~---------------------EGWGLT~Dg~~L~v-S-DGS--------------------------- 209 (276)
.+... +..... .+...+|||+.|+. + |.+
T Consensus 140 g~~~~-l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 140 DPPFQ-ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp SCCEE-CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCcEE-EecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 77643 221100 25668899998865 3 322
Q ss_pred -----ceEEEEcCCCCcEEEEEEeee----CCEeeeeeeeeEEE-CCEEEEEeCCC---CCeEEEEe----CCCCc
Q 023864 210 -----SMLYQIDPQTLKVIRKDIVRY----KGREVRNLNELEFI-KGEVWANVWQV---WPCIPYAY----LQAFG 268 (276)
Q Consensus 210 -----~~L~viDp~t~~vi~~I~V~~----~g~pv~~lNELE~i-dG~lyANvw~s---~d~I~vID----p~T~~ 268 (276)
.+|+++|.++.+.+..+.+.. .++ -..+..+.|. ||++++..... ...|.++| +++++
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~ 293 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS-DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD 293 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS-CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCC-cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc
Confidence 278888988876532223321 011 1123444554 67755442111 02488899 87754
No 278
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.43 E-value=0.0091 Score=54.34 Aligned_cols=143 Identities=9% Similarity=-0.013 Sum_probs=93.5
Q ss_pred EEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC-------------CEEEEE
Q 023864 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ-------------KTGFIY 175 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~-------------~~v~V~ 175 (276)
|++...++.+|.+.. ++.+.|.+++.+.... .++.-+ -+.-|.+.|+.||-+.... ..++++
T Consensus 19 g~~~~~g~~iy~~n~-~d~~~ly~~~~dg~~~-~~l~~~---~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 19 GLFCESDGEVFFSNT-NDNGRLYAMNIDGSNI-HKLSND---TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp TCEEEETTEEEEEEG-GGTTEEEEEETTSCSC-EEEEEE---EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred eEEEEeCCEEEEEeC-CCCceEEEEcCCCCCC-EEccCC---ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 454444688998866 4789999999876543 222211 2456789999999998864 578999
Q ss_pred eCCCCcEEEEEecCCCCeeEEeeCCCEEEEEC----CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEE
Q 023864 176 DQNNLNKLEEFTHQMKDGWGLATDGKVLFGSD----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWAN 251 (276)
Q Consensus 176 D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSD----GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyAN 251 (276)
|.+..+. ..+.- ..|..++++|++||.+| +...|+.+|...-. .++|.-.. ..+ .-++++.||-.
T Consensus 94 ~~dg~~~-~~l~~--~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~-~~~------~~~~g~~iy~t 162 (302)
T 3s25_A 94 KRNGHGS-TVLDP--DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHY-LFT------CNTSDRYFYYN 162 (302)
T ss_dssp ETTSCCC-EEEEC--SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSC-CCC------SEEETTEEEEE
T ss_pred eCCCCcc-eEeec--CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCC-ceE------eeEECCEEEEE
Confidence 9887763 33332 25667889999999875 78899999987433 33333221 111 23666676644
Q ss_pred eCCCCCeEEEEeCCCCc
Q 023864 252 VWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 252 vw~s~d~I~vIDp~T~~ 268 (276)
--.. +.|.+++...+.
T Consensus 163 ~~g~-~~Iy~~~l~g~~ 178 (302)
T 3s25_A 163 NPKN-GQLYRYDTASQS 178 (302)
T ss_dssp CTTT-CCEEEEETTTTE
T ss_pred eCCC-ceEEEEECCCCC
Confidence 3345 677777766644
No 279
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.43 E-value=0.00077 Score=66.98 Aligned_cols=157 Identities=8% Similarity=0.050 Sum_probs=90.0
Q ss_pred eEEEEecCCE-EEEEcCC------CCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCC
Q 023864 108 QGLLYAENDT-LFESTGL------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 108 QGL~~~~dg~-LyeStG~------yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tl 180 (276)
..+.|+|||+ |..+++. .....+..||+++|++..-...+.....-....+|++|.-. .++.++++|.++.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCC
Confidence 4588999986 4433331 01256789999999865432323344444445556666554 5789999999887
Q ss_pred cEEEEEecCCC---------------------CeeEEeeCCCEEEE-E-CCC----------------------------
Q 023864 181 NKLEEFTHQMK---------------------DGWGLATDGKVLFG-S-DGS---------------------------- 209 (276)
Q Consensus 181 k~i~~~~~~~~---------------------EGWGLT~Dg~~L~v-S-DGS---------------------------- 209 (276)
+.. ++..... .+...+|||+.|.. + |.+
T Consensus 143 ~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 143 PSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp CCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred ceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence 643 3322211 13557899997744 3 211
Q ss_pred ------ceEEEEcCCC---Cc--EEEEEEeeeC--CEeeeeeeeeEEE-CCEEEEEeCC---CCCeEEEEeCCCCc
Q 023864 210 ------SMLYQIDPQT---LK--VIRKDIVRYK--GREVRNLNELEFI-KGEVWANVWQ---VWPCIPYAYLQAFG 268 (276)
Q Consensus 210 ------~~L~viDp~t---~~--vi~~I~V~~~--g~pv~~lNELE~i-dG~lyANvw~---s~d~I~vIDp~T~~ 268 (276)
-+|+++|.++ .+ ...++..... ++ -..+.++.|. ||+++|-... .+..|.++|++||+
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIG-DHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTS-CEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCC-CeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 1688888888 63 2223332110 11 1234555665 7885433222 21269999999876
No 280
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.39 E-value=0.0024 Score=60.00 Aligned_cols=166 Identities=13% Similarity=0.137 Sum_probs=89.2
Q ss_pred eEEEEEEecCCCCCceEEEEecCCEEEEEcCCCC-----------CCeEEEEeCCCCcEE--------EEeecCCCceEE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYG-----------RSSVRRVALETGKVE--------AINQMEGSYFGE 153 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg-----------~S~I~~iDl~tgkv~--------~~~~l~~~~FgE 153 (276)
-.|+..+|....-+...|.|.+||.||.++|..+ ..+|.++|++. ++- .....+- .-..
T Consensus 128 ~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG-~ip~~nPf~~~~i~a~G~-RNp~ 205 (347)
T 3das_A 128 DTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG-EPAPGNPFPGSPVYSYGH-RNVQ 205 (347)
T ss_dssp EEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS-SBCTTCSSTTCCEEEBCC-SBCC
T ss_pred EEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC-CccCCCCCCCCeEEeeCC-CCcc
Confidence 3466778876667878899999999999998533 35777887753 210 0111121 1134
Q ss_pred EEEEe-CCEEEEEEeeCCE---EEEEeCCC----------------CcEEEEEecCCCCeeEEeeCCCEEEEEC-CCceE
Q 023864 154 GLTLL-GEKLFQVTWLQKT---GFIYDQNN----------------LNKLEEFTHQMKDGWGLATDGKVLFGSD-GSSML 212 (276)
Q Consensus 154 Git~~-g~~LyqlTwk~~~---v~V~D~~t----------------lk~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L 212 (276)
|++++ .++||+.....+. +..+-+.. ...+..+.......-|++-.+..+|+.. ...+|
T Consensus 206 Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l 285 (347)
T 3das_A 206 GLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERL 285 (347)
T ss_dssp EEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSE
T ss_pred eEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEE
Confidence 67776 4688888764432 22221110 0011111100012235655556777766 56788
Q ss_pred EEEcCCCCcEEEE--EEe-eeCCEeeeeeeeeEE-ECCEEEEEeCCC---------CCeEEEEeC
Q 023864 213 YQIDPQTLKVIRK--DIV-RYKGREVRNLNELEF-IKGEVWANVWQV---------WPCIPYAYL 264 (276)
Q Consensus 213 ~viDp~t~~vi~~--I~V-~~~g~pv~~lNELE~-idG~lyANvw~s---------~d~I~vIDp 264 (276)
..++.+..+.+.+ .-+ +..++ +-.++. -||.||+..... +|+|++|-+
T Consensus 286 ~~v~~~~~~~~~~~e~~l~~~~gR----~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 286 WRIPLKGTAAAADPQAFLEGEYGR----LRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp EEEEEETTEESSCCEEESTTTSSC----EEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred EEEEecCCceecceEEeecCCCCC----ccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 8777655432111 111 11233 334444 389999886543 257888754
No 281
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.38 E-value=0.00079 Score=61.92 Aligned_cols=121 Identities=12% Similarity=0.067 Sum_probs=82.5
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
......+.|++++.++.+++ .+..|+.||+++..+ .....-.. --..+++. ++.++...-.++.+.+||..+.+
T Consensus 209 ~~~~~~~~~~~~~~~l~~g~--~dg~i~~wd~~~~~~-~~~~~h~~-~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 209 NIWFCSLDVSASSRMVVTGD--NVGNVILLNMDGKEL-WNLRMHKK-KVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp SCCCCCEEEETTTTEEEEEC--SSSBEEEEESSSCBC-CCSBCCSS-CEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CccEEEEEECCCCCEEEEEe--CCCcEeeeccCccee-EEEecccc-eEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 34456789999988777666 677899999976543 22222111 12455664 45577777788999999998887
Q ss_pred EEEEEecC--CCC---eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEe
Q 023864 182 KLEEFTHQ--MKD---GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (276)
Q Consensus 182 ~i~~~~~~--~~E---GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V 228 (276)
....+... ... ...+++||+.|+....+..|.++|..+++....+..
T Consensus 285 ~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 285 GKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp SSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEec
Confidence 66555321 111 122568999998877788999999999887766543
No 282
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.37 E-value=0.02 Score=50.89 Aligned_cols=156 Identities=7% Similarity=0.036 Sum_probs=95.4
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeC-CEEEEEEeeCCEEEEEeCCCC
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g-~~LyqlTwk~~~v~V~D~~tl 180 (276)
.......+.|+|||.++.+++ .+..|+.||..+++......+.. .-.-..+++.. +++....-.++.+.++|..+.
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASAS--FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEE--TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cCCcEEEEEECCCCCEEEEEE--CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 355668999999998877777 67889999998886543333332 22234566653 455555567899999998776
Q ss_pred cE---EEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCC
Q 023864 181 NK---LEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (276)
Q Consensus 181 k~---i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~ 254 (276)
+. +..+.-... ....+.+||+.|.....+..|.++|.++.+.+......... ..++.|.+. +|...|..-.
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~---~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE---STVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS---SCEEEEEECTTSSEEEEEET
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC---CceEEEEECCCCCEEEEEeC
Confidence 43 333331111 23346789998888766778999998776543222222111 234455665 4555555544
Q ss_pred CCCeEEEEeC
Q 023864 255 VWPCIPYAYL 264 (276)
Q Consensus 255 s~d~I~vIDp 264 (276)
+ ..|.+-|.
T Consensus 215 D-~~v~iW~~ 223 (345)
T 3fm0_A 215 D-RTVRIWRQ 223 (345)
T ss_dssp T-SCEEEEEE
T ss_pred C-CeEEEecc
Confidence 4 56666553
No 283
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.36 E-value=0.0026 Score=62.72 Aligned_cols=154 Identities=10% Similarity=0.016 Sum_probs=90.3
Q ss_pred ceEEEEecCCEE--EEE-cCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEee------------C
Q 023864 107 TQGLLYAENDTL--FES-TGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL------------Q 169 (276)
Q Consensus 107 TQGL~~~~dg~L--yeS-tG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk------------~ 169 (276)
..++.|+|||++ |.+ .+.-+...|+++|+++|+.+....++...| .++++. |..|+-.... .
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 468899999863 322 121134789999999998641223333222 355664 4567666653 3
Q ss_pred CEEEEEeCCCCcEEEE--EecC----CCCeeEEeeCCCEEEEEC--C--CceEEEEcCCCCcEEEEEEeeeCCEeeeeee
Q 023864 170 KTGFIYDQNNLNKLEE--FTHQ----MKDGWGLATDGKVLFGSD--G--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLN 239 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~--~~~~----~~EGWGLT~Dg~~L~vSD--G--S~~L~viDp~t~~vi~~I~V~~~g~pv~~lN 239 (276)
.+++++|..+.+...+ +..+ .-.+..+++||++|+++- + .+.|+++|..+.+.. .+....++. .
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~--~--- 275 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAK--Y--- 275 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCC--E---
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCce--E---
Confidence 4599999988763211 2211 012556889999886632 3 569999998776543 343332211 1
Q ss_pred eeEEECCEEE-EEeCC--CCCeEEEEeCCCCc
Q 023864 240 ELEFIKGEVW-ANVWQ--VWPCIPYAYLQAFG 268 (276)
Q Consensus 240 ELE~idG~ly-ANvw~--s~d~I~vIDp~T~~ 268 (276)
...+.+|.+| ...|. . ..|.++|.++++
T Consensus 276 ~~~~~~g~l~~~s~~~~~~-~~l~~~d~~~~~ 306 (695)
T 2bkl_A 276 EVHAWKDRFYVLTDEGAPR-QRVFEVDPAKPA 306 (695)
T ss_dssp EEEEETTEEEEEECTTCTT-CEEEEEBTTBCS
T ss_pred EEEecCCcEEEEECCCCCC-CEEEEEeCCCCC
Confidence 1113466555 44443 3 689999998864
No 284
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.33 E-value=0.073 Score=46.91 Aligned_cols=124 Identities=9% Similarity=0.057 Sum_probs=84.1
Q ss_pred eeEEEEEEecCCCCCceEEEE-----ec-CCEEEEEcCCCCCCeEEEEeCCCCc-------EEEEeecCCCceEEEEEEe
Q 023864 92 TIQVVNEFPHDPRAFTQGLLY-----AE-NDTLFESTGLYGRSSVRRVALETGK-------VEAINQMEGSYFGEGLTLL 158 (276)
Q Consensus 92 t~~Vv~~~Phd~~aFTQGL~~-----~~-dg~LyeStG~yg~S~I~~iDl~tgk-------v~~~~~l~~~~FgEGit~~ 158 (276)
.++...++.- ....+..+.| .+ |+.++.+++ .+..|+.||+.+++ ..... -+....-..+++.
T Consensus 10 ~~~~~~~l~g-H~~~V~~~~~~~s~~~~~d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~V~~~~~~ 85 (343)
T 2xzm_R 10 QVVKRGILEG-HSDWVTSIVAGFSQKENEDSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKAL-TGHNHFVSDLALS 85 (343)
T ss_dssp EEEEEEEEEC-CSSCEEEEEECCCSSTTCCCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEE-CCCSSCEEEEEEC
T ss_pred Eeeeeeeecc-chhhhhheeeEEEeecCCCCCEEEEEc--CCCEEEEEECCcCCcccccccccchh-ccCCCceEEEEEC
Confidence 4555666652 3556789998 65 788877777 67889999997643 22211 1222223455554
Q ss_pred C-CEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCC--eeEEeeCCCEEEEECCCceEEEEcCCC
Q 023864 159 G-EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD--GWGLATDGKVLFGSDGSSMLYQIDPQT 219 (276)
Q Consensus 159 g-~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~E--GWGLT~Dg~~L~vSDGS~~L~viDp~t 219 (276)
. +.+.+..-.++++.+||..+.+.+.++.-...+ ...+.+||+.|+....+..|.++|...
T Consensus 86 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 86 QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 3 445556667899999999999999888632122 334678999998877788999999864
No 285
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.29 E-value=0.018 Score=57.03 Aligned_cols=161 Identities=14% Similarity=0.056 Sum_probs=96.3
Q ss_pred CCceEEEEecCCE-EEEEcCC-CCCCeEEEEeCCCC--cEEEEeecCCCceEEEEEEeCCEEEEEEeeC---CEEEEEeC
Q 023864 105 AFTQGLLYAENDT-LFESTGL-YGRSSVRRVALETG--KVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ---KTGFIYDQ 177 (276)
Q Consensus 105 aFTQGL~~~~dg~-LyeStG~-yg~S~I~~iDl~tg--kv~~~~~l~~~~FgEGit~~g~~LyqlTwk~---~~v~V~D~ 177 (276)
.|.-++.+++||+ |+.+... ...+.|..+|++++ +.. .+.-+....-.-+..+|++||.++.++ .+++++|.
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~ 312 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL-TVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDA 312 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE-EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE-EEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 3446889999986 5443332 23469999999877 332 222222111112667899999999875 68999999
Q ss_pred CCCcE--EEEE-ecCCCCeeEEeeCCCEEEEE---CCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEE
Q 023864 178 NNLNK--LEEF-THQMKDGWGLATDGKVLFGS---DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWAN 251 (276)
Q Consensus 178 ~tlk~--i~~~-~~~~~EGWGLT~Dg~~L~vS---DGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyAN 251 (276)
++.+. ..++ +.. .+-.+++++|++|+++ ||..+|+++|.++. ..+.+.....+. +..+. ....+++|+..
T Consensus 313 ~~~~~~~~~~l~~~~-~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~-~~~~~-~~~d~~~l~~~ 388 (693)
T 3iuj_A 313 ANPGPAHWRDLIPER-QQVLTVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGS-VSGFN-GKHDDPALYFG 388 (693)
T ss_dssp TSCCGGGCEEEECCC-SSCEEEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSE-EEECC-CCTTCSCEEEE
T ss_pred CCCCccccEEEecCC-CCEEEEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCce-EEeee-cCCCCCEEEEE
Confidence 87654 3344 322 1222788899988763 57789999998854 445555433222 11111 00113345543
Q ss_pred --eCCCCCeEEEEeCCCCcEE
Q 023864 252 --VWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 252 --vw~s~d~I~vIDp~T~~v~ 270 (276)
-+.+-..|..+|.++++..
T Consensus 389 ~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 389 FENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp EECSSSCCEEEEECTTTCCEE
T ss_pred ecCCCCCCEEEEEECCCCeEE
Confidence 2233257999999887654
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.29 E-value=0.013 Score=58.62 Aligned_cols=150 Identities=11% Similarity=0.012 Sum_probs=98.4
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec------CCCceEEEEEEe-CCEEEEEEeeCCEEEEEe
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM------EGSYFGEGLTLL-GEKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l------~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D 176 (276)
...+..+..+++|+||.+|. +-|.++|+++++...-... +. .+--.+..+ +++||+.|. +-++++|
T Consensus 451 ~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~d~~g~lWigt~--~Gl~~~~ 523 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVS-KQITTLFRDSHKRLWIGGE--EGLSVFK 523 (795)
T ss_dssp CSCEEEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCC-CCEEEEEECTTCCEEEEES--SCEEEEE
T ss_pred CCeeEEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCC-ceEEEEEECCCCCEEEEeC--CceEEEe
Confidence 34567888888899999875 3599999999977543221 11 222355555 579999997 5688999
Q ss_pred CCCCcEEEEEec-------CCCCeeEEeeCC-CEEEE-ECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC
Q 023864 177 QNNLNKLEEFTH-------QMKDGWGLATDG-KVLFG-SDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG 246 (276)
Q Consensus 177 ~~tlk~i~~~~~-------~~~EGWGLT~Dg-~~L~v-SDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG 246 (276)
+++.+. .+.. +...-.++..|. ..||+ +++ -|+.+|+++.+... .. ..+|-|-..++.+... +|
T Consensus 524 ~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~-~~-~~~gl~~~~i~~i~~d~~g 597 (795)
T 4a2l_A 524 QEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKR-YN-TTNGLPNNVVYGILEDSFG 597 (795)
T ss_dssp EETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTTEEEE-EC-GGGTCSCSCEEEEEECTTS
T ss_pred CCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCCcEEE-eC-CCCCCchhheEEEEECCCC
Confidence 887665 4431 111234566543 45776 443 79999999875542 22 2345554455555554 68
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcE
Q 023864 247 EVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 247 ~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.||+.- . +-|.++||++++.
T Consensus 598 ~lWi~t--~-~Gl~~~~~~~~~~ 617 (795)
T 4a2l_A 598 RLWLST--N-RGISCFNPETEKF 617 (795)
T ss_dssp CEEEEE--T-TEEEEEETTTTEE
T ss_pred CEEEEc--C-CceEEEcCCCCcE
Confidence 999887 4 7799999998653
No 287
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.28 E-value=0.011 Score=52.31 Aligned_cols=153 Identities=11% Similarity=0.138 Sum_probs=97.3
Q ss_pred EEEEecCCEEEEEcCCC----C-----CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC-------CEE
Q 023864 109 GLLYAENDTLFESTGLY----G-----RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ-------KTG 172 (276)
Q Consensus 109 GL~~~~dg~LyeStG~y----g-----~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~-------~~v 172 (276)
.++.. +++||.-.|.. + .+.+.+||+.+++-....++|....+-+++..+++||++-=.+ +.+
T Consensus 51 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 51 SIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp EEECS-SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE
T ss_pred EEEEE-CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceE
Confidence 34433 57898877732 1 1238899999998766666776555567788899999996543 578
Q ss_pred EEEeCCCCcEE--EEEecCCCCeeEEeeCCCEEEEECC-------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEE
Q 023864 173 FIYDQNNLNKL--EEFTHQMKDGWGLATDGKVLFGSDG-------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (276)
Q Consensus 173 ~V~D~~tlk~i--~~~~~~~~EGWGLT~Dg~~L~vSDG-------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~ 243 (276)
.+||+.+.+-. ...+.+ ..+-+.+..+..||+--| .+.++.+|+++.+-...-.. ...+.. --+..
T Consensus 130 ~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~---~~~~~ 204 (318)
T 2woz_A 130 LCYDPVAAKWSEVKNLPIK-VYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSM---FGVAI 204 (318)
T ss_dssp EEEETTTTEEEEECCCSSC-EESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBS---CEEEE
T ss_pred EEEeCCCCCEeECCCCCCc-ccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCccc---ceEEE
Confidence 99999876543 333333 345555556667777444 46799999999875432111 111111 12345
Q ss_pred ECCEEEEEeC-----CCCCeEEEEeCCCCc
Q 023864 244 IKGEVWANVW-----QVWPCIPYAYLQAFG 268 (276)
Q Consensus 244 idG~lyANvw-----~s~d~I~vIDp~T~~ 268 (276)
.+|+||+-=. .. +.+.+.|+++++
T Consensus 205 ~~~~iyv~GG~~~~~~~-~~~~~yd~~~~~ 233 (318)
T 2woz_A 205 HKGKIVIAGGVTEDGLS-ASVEAFDLKTNK 233 (318)
T ss_dssp ETTEEEEEEEEETTEEE-EEEEEEETTTCC
T ss_pred ECCEEEEEcCcCCCCcc-ceEEEEECCCCe
Confidence 6888885432 13 568899999865
No 288
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.0035 Score=63.03 Aligned_cols=156 Identities=8% Similarity=0.000 Sum_probs=102.3
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEE-----------------------------EEeecCCCceEE
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVE-----------------------------AINQMEGSYFGE 153 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~-----------------------------~~~~l~~~~FgE 153 (276)
-..++..+.|+|||+++.|++ .+..|+ |+++++.+ ....++...+-.
T Consensus 14 ~~~~v~sv~~SpDG~~iASas--~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~ 89 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTF--PDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR 89 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECS--SSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE
T ss_pred hhccEEEEEECCCCCEEEEEc--CCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE
Confidence 346677889999999999887 677775 55555421 011222344556
Q ss_pred EEEEe--CCEEEEEEeeCCEEEEEeCCCCcEEEEEecCC------CCeeEEeeCCCEEEEECCCceEEEEcCCCCcE---
Q 023864 154 GLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM------KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV--- 222 (276)
Q Consensus 154 Git~~--g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~------~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~v--- 222 (276)
++++. |..|-.++ .++.+.++|.++ .+..+...+ -....++|||+.|+....+.+|.++|.++.+.
T Consensus 90 ~vawSPdG~~LAs~s-~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 90 VCKPSPIDDWMAVLS-NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EEEECSSSSCEEEEE-TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EEEECCCCCEEEEEe-CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 66664 34455444 678899999766 555555111 12234569999999988899999999998763
Q ss_pred ----EEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 223 ----IRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 223 ----i~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
++++.....|+. ..+.-+.|..+. .|..-.. +.|-+.|.++++
T Consensus 167 ~~i~l~ti~~~~~gh~-~~V~sVawSPdg-Laass~D-~tVrlWd~~~~~ 213 (588)
T 2j04_A 167 EFYFESSIRLSDAGSK-DWVTHIVWYEDV-LVAALSN-NSVFSMTVSASS 213 (588)
T ss_dssp CCEEEEEEECSCTTCC-CCEEEEEEETTE-EEEEETT-CCEEEECCCSSS
T ss_pred cceeeeeeeccccccc-ccEEEEEEcCCc-EEEEeCC-CeEEEEECCCCc
Confidence 566665555543 344445566444 5555566 899999998866
No 289
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.28 E-value=0.018 Score=50.06 Aligned_cols=128 Identities=12% Similarity=-0.008 Sum_probs=78.8
Q ss_pred CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC--C--EEEEEeCCCCcEEEEEecCCCCeeEEeeCCCE
Q 023864 127 RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ--K--TGFIYDQNNLNKLEEFTHQMKDGWGLATDGKV 202 (276)
Q Consensus 127 ~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~--~--~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~ 202 (276)
.+.|..+|+++++...- .....-.+..+|++|+.+...+ + .++++|.++.+...-...+...+...++||+.
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~ 117 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRK 117 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSE
T ss_pred cceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCE
Confidence 67899999999975332 2322223333467888887764 3 48899998877654443321133446789998
Q ss_pred EEEE--------------------CC-------CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCC
Q 023864 203 LFGS--------------------DG-------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (276)
Q Consensus 203 L~vS--------------------DG-------S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~ 254 (276)
|+.+ || ..+|+++|+++.+.++.+.. . ....+.+. ||.+|+....
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~spdg~~~~~~~~ 190 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWHRDKIVVNVPHR 190 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEETTEEEEEEECC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCCCCeEEEEEecc
Confidence 7664 22 47899999999887555543 1 23344455 4544444332
Q ss_pred --------CCCeEEEEeCCCCc
Q 023864 255 --------VWPCIPYAYLQAFG 268 (276)
Q Consensus 255 --------s~d~I~vIDp~T~~ 268 (276)
. ..|.++| +++
T Consensus 191 ~~~~~~~~~-~~l~~~d--~~~ 209 (347)
T 2gop_A 191 EIIPQYFKF-WDIYIWE--DGK 209 (347)
T ss_dssp CSSCCSSCC-EEEEEEE--TTE
T ss_pred ccccccccc-ccEEEeC--CCc
Confidence 3 4788898 544
No 290
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.23 E-value=0.041 Score=52.09 Aligned_cols=149 Identities=11% Similarity=-0.094 Sum_probs=85.9
Q ss_pred eEEEEec---CCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCc--eEEEEEEe-CCEEEEE------------EeeC
Q 023864 108 QGLLYAE---NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY--FGEGLTLL-GEKLFQV------------TWLQ 169 (276)
Q Consensus 108 QGL~~~~---dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~--FgEGit~~-g~~Lyql------------Twk~ 169 (276)
.-|.|++ |+.++.|++ .+..|+.||++||+.+++..-+..+ ..-.+++. ++++.+. --.+
T Consensus 182 ~~l~fs~~~g~~~~LaSgS--~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTT--IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp CEEEEEEEETSTTEEEEEE--TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred eeEEeeccCCCCceEEEec--CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 3566666 567888888 8999999999999988887533211 11122333 2333322 2245
Q ss_pred CEEEEEeCCCCcEEEEEecCCCCe---eEE--eeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE
Q 023864 170 KTGFIYDQNNLNKLEEFTHQMKDG---WGL--ATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~~~~~~~EG---WGL--T~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i 244 (276)
+++-++|+++.+.+..+.+..++| .-+ ..+|..+.....+.+|.++|.++++.++++.-.. ..+ ..-+.|.
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~--~~v--vs~vafS 335 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVS--DQH--WSFVKWS 335 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC----CC--CCEEEEC
T ss_pred cEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCC--CCe--EEEEEEC
Confidence 788889999999888764321112 122 1223334443346789999999999988875211 111 1123344
Q ss_pred -CCEEEEEeCCCCCeEEEEe
Q 023864 245 -KGEVWANVWQVWPCIPYAY 263 (276)
Q Consensus 245 -dG~lyANvw~s~d~I~vID 263 (276)
||...|.--.+ +.|-+=|
T Consensus 336 PDG~~LaSGS~D-~TIklWd 354 (356)
T 2w18_A 336 GTDSHLLAGQKD-GNIFVYH 354 (356)
T ss_dssp SSSSEEEEECTT-SCEEEEE
T ss_pred CCCCEEEEEECC-CcEEEec
Confidence 56544444344 5665544
No 291
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.23 E-value=0.0062 Score=53.55 Aligned_cols=111 Identities=10% Similarity=0.080 Sum_probs=68.4
Q ss_pred ceEEEEecCCE-EEEEcCCCCCCe--EEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEe--------------
Q 023864 107 TQGLLYAENDT-LFESTGLYGRSS--VRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTW-------------- 167 (276)
Q Consensus 107 TQGL~~~~dg~-LyeStG~yg~S~--I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTw-------------- 167 (276)
...+.|+|||+ |+..+..-+... |.++|+++|+......++. .. +.+. +++++...-
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~ 315 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS--HLMSNFDGSLMVGDGCDAPVDVADADSYN 315 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE--EEEECSSSSEEEEEECCC----------C
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC--CCccCCCCceEEEecCCcceeeccccccc
Confidence 45679999985 544332224444 9999999998765544543 22 4443 344444321
Q ss_pred --eCCEEEEEeCCCCcEEEEEecC-C------------CCeeEEeeCCCEEEE-EC--CCceEEEEcCCCCcE
Q 023864 168 --LQKTGFIYDQNNLNKLEEFTHQ-M------------KDGWGLATDGKVLFG-SD--GSSMLYQIDPQTLKV 222 (276)
Q Consensus 168 --k~~~v~V~D~~tlk~i~~~~~~-~------------~EGWGLT~Dg~~L~v-SD--GS~~L~viDp~t~~v 222 (276)
....++++|.++.+. ..+... . .....+++||+.|+. ++ |...|+.+|.++.+.
T Consensus 316 ~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 316 IENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred cCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 347899999987764 333321 1 122467899998755 54 567899999877654
No 292
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.21 E-value=0.0012 Score=64.45 Aligned_cols=109 Identities=14% Similarity=0.068 Sum_probs=74.1
Q ss_pred EEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC----CceEEEEEEeCCEEEEEEee--------CCEEEEEe
Q 023864 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG----SYFGEGLTLLGEKLFQVTWL--------QKTGFIYD 176 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~----~~FgEGit~~g~~LyqlTwk--------~~~v~V~D 176 (276)
++.|++||+++.++ ++..|..||+++|+......-.. ....-.+..+|++|...... ++.++++|
T Consensus 20 ~~~~s~dg~~~~~~---~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQS---ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEEC---TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEc---CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 67889999765543 35689999999998755443211 13333444456777766653 47999999
Q ss_pred CCCCcEE--EEEecCCCCeeEEeeCCCEEEE-ECCCceEEEEcCCCCcEE
Q 023864 177 QNNLNKL--EEFTHQMKDGWGLATDGKVLFG-SDGSSMLYQIDPQTLKVI 223 (276)
Q Consensus 177 ~~tlk~i--~~~~~~~~EGWGLT~Dg~~L~v-SDGS~~L~viDp~t~~vi 223 (276)
.++.+.+ .++.-. .....++|||+.|.. +| ++|+++|.++.+.+
T Consensus 97 ~~~g~~~~~~~l~~~-~~~~~~SPDG~~la~~~~--~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 97 LSNGEFVRGNELPRP-IQYLCWSPVGSKLAYVYQ--NNIYLKQRPGDPPF 143 (719)
T ss_dssp TTTTEECCSSCCCSS-BCCEEECSSTTCEEEEET--TEEEEESSTTSCCE
T ss_pred CCCCccccceecCcc-cccceECCCCCEEEEEEC--CeEEEEeCCCCCcE
Confidence 9988763 222211 244568999987754 54 59999999998764
No 293
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.0046 Score=61.86 Aligned_cols=158 Identities=6% Similarity=0.002 Sum_probs=99.4
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCC--cEEEEeecCCCceEEEEEEe-C--CEEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETG--KVEAINQMEGSYFGEGLTLL-G--EKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tg--kv~~~~~l~~~~FgEGit~~-g--~~LyqlTwk~~~v~V~D~~ 178 (276)
..-+..+.|++||.++.+++ .+..|++||++++ +......-... ---.+++. + +.+....-.++.+.+||..
T Consensus 9 ~~~V~~l~~s~dg~~latg~--~dg~I~vwd~~~~~~~~~~~l~~h~~-~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEE--TTTEEEEEEEETTEEEEEEEECCCSS-CEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred cceeEEEEECCCCCeEEEEE--CCCcEEEEecCCCCCccceeccCCcC-ceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 44457899999988766666 6788999999854 44333321111 22356664 2 4555666678999999998
Q ss_pred CCc--EEEEEecCCC--CeeEEeeC--CCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEEC-------
Q 023864 179 NLN--KLEEFTHQMK--DGWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK------- 245 (276)
Q Consensus 179 tlk--~i~~~~~~~~--EGWGLT~D--g~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~id------- 245 (276)
+.+ .+..+..... ....++++ |+.++....+..|.++|..+.+....+....... .++-+.+..
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~---~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI---GVNSASWAPATIEEDG 162 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS---CEEEEEECCCC-----
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC---ceEEEEecCccccccc
Confidence 876 4444432211 23335677 8888888888999999998875443333332222 234444543
Q ss_pred -------CEEEEEeCCCCCeEEEEeCCCCc
Q 023864 246 -------GEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 246 -------G~lyANvw~s~d~I~vIDp~T~~ 268 (276)
|...+..-.+ ..|.+.|..++.
T Consensus 163 ~~~~~~d~~~l~sgs~d-g~I~iwd~~~~~ 191 (753)
T 3jro_A 163 EHNGTKESRKFVTGGAD-NLVKIWKYNSDA 191 (753)
T ss_dssp ----CGGGCCEEEEETT-SCEEEEEEETTT
T ss_pred ccccCCCCCEEEEEECC-CeEEEEeccCCc
Confidence 5555555556 778888877753
No 294
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.18 E-value=0.0012 Score=63.89 Aligned_cols=113 Identities=11% Similarity=0.034 Sum_probs=73.2
Q ss_pred eEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC----CceEEEEEEeCCEEEEEEee--------CCEEEEE
Q 023864 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG----SYFGEGLTLLGEKLFQVTWL--------QKTGFIY 175 (276)
Q Consensus 108 QGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~----~~FgEGit~~g~~LyqlTwk--------~~~v~V~ 175 (276)
..+.|++||+++. ++ .+..|+.||+++|+......-.. ....-.+..+|++|...... .+.++++
T Consensus 20 ~~~~~spdg~~~~-~~--~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 20 PEAKWISDTEFIY-RE--QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCBSSSSCBCC-CC--SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccEEcCCCcEEE-Ee--CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3677899988543 34 44589999999998765543322 13323333345666655442 2789999
Q ss_pred eCCCCcEEEEEecC-C----CCeeEEeeCCCEE-EEECCCceEEEEcCCCCcEEEEE
Q 023864 176 DQNNLNKLEEFTHQ-M----KDGWGLATDGKVL-FGSDGSSMLYQIDPQTLKVIRKD 226 (276)
Q Consensus 176 D~~tlk~i~~~~~~-~----~EGWGLT~Dg~~L-~vSDGS~~L~viDp~t~~vi~~I 226 (276)
|.++.+. .++... . .....++|||+.| |+++ .+|+++|.++.+.++..
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEE
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEe
Confidence 9998876 444322 1 1234588999876 5566 68999999998775443
No 295
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.019 Score=57.40 Aligned_cols=170 Identities=9% Similarity=-0.040 Sum_probs=105.2
Q ss_pred eEEEEEEecCCCCCceEEEEecC--CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEeC---CEEEEEE
Q 023864 93 IQVVNEFPHDPRAFTQGLLYAEN--DTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG---EKLFQVT 166 (276)
Q Consensus 93 ~~Vv~~~Phd~~aFTQGL~~~~d--g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~g---~~LyqlT 166 (276)
.+.+.++.. ...-+..+.|+++ +.++.+++ .+..|+.||+.+++......+. ...--..+++.. +.++...
T Consensus 43 ~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 43 HKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp EEEEEEECC-CSSCEEEEEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred CccceeccC-CcCceEEEEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEE
Confidence 355666642 2455679999877 77777766 6788999999999743333222 122234555543 4566666
Q ss_pred eeCCEEEEEeCCCCcEEEEEec--CCCCeeE--Eee-------------CCCEEEEECCCceEEEEcCCCCcEEEEEEee
Q 023864 167 WLQKTGFIYDQNNLNKLEEFTH--QMKDGWG--LAT-------------DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 167 wk~~~v~V~D~~tlk~i~~~~~--~~~EGWG--LT~-------------Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~ 229 (276)
-.++.+.+||..+.+....... ....-.. +.+ |++.|+....+..|.++|..+.+....+...
T Consensus 120 s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee
Confidence 6889999999987743322221 1111122 334 5788888777888999998877543333222
Q ss_pred eCCEeeeeeeeeEEE-C---CEEEEEeCCCCCeEEEEeCCCC
Q 023864 230 YKGREVRNLNELEFI-K---GEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 230 ~~g~pv~~lNELE~i-d---G~lyANvw~s~d~I~vIDp~T~ 267 (276)
..++. ..++-+.+. + |.+.+..... ..|.+.|..++
T Consensus 200 ~~~h~-~~V~~l~~sp~~~~~~~l~s~s~D-g~I~iwd~~~~ 239 (753)
T 3jro_A 200 LEGHS-DWVRDVAWSPTVLLRSYLASVSQD-RTCIIWTQDNE 239 (753)
T ss_dssp ECCCS-SCEEEEEECCCCSSSEEEEEEESS-SCEEEEEESSS
T ss_pred ecCCC-CcEEEEEeccCCCCCCEEEEEecC-CEEEEecCCCC
Confidence 22221 134455565 3 6777777677 88999998885
No 296
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.14 E-value=0.008 Score=53.04 Aligned_cols=115 Identities=11% Similarity=0.104 Sum_probs=80.1
Q ss_pred EEEEecCCEEEEEcCCCC----CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeC-----CEEEEEeCCC
Q 023864 109 GLLYAENDTLFESTGLYG----RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ-----KTGFIYDQNN 179 (276)
Q Consensus 109 GL~~~~dg~LyeStG~yg----~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~-----~~v~V~D~~t 179 (276)
..+.. +++||.-.|... .+.+.+||+++.+-....++|...++-+++..+++||++-=.+ +.+.+||+.+
T Consensus 143 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 143 TVLSH-MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EEEEE-TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred eEEEE-CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 44454 579998777411 3679999999998766667776666667888899999996543 4789999987
Q ss_pred CcE--EEEEecCCCCeeEEeeCCCEEEEECCC---------------ceEEEEcCCCCcEEEE
Q 023864 180 LNK--LEEFTHQMKDGWGLATDGKVLFGSDGS---------------SMLYQIDPQTLKVIRK 225 (276)
Q Consensus 180 lk~--i~~~~~~~~EGWGLT~Dg~~L~vSDGS---------------~~L~viDp~t~~vi~~ 225 (276)
.+- +...+.+ ..+-+++.-++.||+--|. +.++++|+++.+-...
T Consensus 222 ~~W~~~~~~p~~-r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 222 NKWAPFEAFPQE-RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp TEEEEECCCSSC-CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CeEEECCCCCCc-ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 643 3333443 4555666556677775432 4689999999876544
No 297
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.14 E-value=0.0051 Score=56.44 Aligned_cols=159 Identities=8% Similarity=-0.022 Sum_probs=97.2
Q ss_pred EecCCCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEe--CCEEEEEEeeCCEEEE
Q 023864 99 FPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLL--GEKLFQVTWLQKTGFI 174 (276)
Q Consensus 99 ~Phd~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~--g~~LyqlTwk~~~v~V 174 (276)
-||+ ..+..|+|+|. +.++.+++ .+..|+.||+++++......+.. .---.+|++. ++.++...-.++++.+
T Consensus 116 ~~~~--~~V~~l~~~P~~~~~lasGs--~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 116 APFD--RRATSLAWHPTHPSTVAVGS--KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EECS--SCEEEEEECSSCTTCEEEEE--TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCC--CCEEEEEEeCCCCCEEEEEe--CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3664 34679999984 56666555 66789999999887544444332 1112356664 4455555567899999
Q ss_pred EeCCCCcEEEEEecCC----CCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EE
Q 023864 175 YDQNNLNKLEEFTHQM----KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EV 248 (276)
Q Consensus 175 ~D~~tlk~i~~~~~~~----~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~l 248 (276)
||.++........... -..+.+.+||+.|+..+....|.++|..+.. +.++. ++. ..++-+.+. ++ .+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~~----~h~-~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNLR----MHK-KKVTHVALNPCCDWF 265 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCSB----CCS-SCEEEEEECTTCSSE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEEe----ccc-ceEEeeeecCCCceE
Confidence 9987654332222211 1345678899999998888899999986533 22221 111 134455565 33 35
Q ss_pred EEEeCCCCCeEEEEeCCCCc
Q 023864 249 WANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 249 yANvw~s~d~I~vIDp~T~~ 268 (276)
+|....+ ..|.+-|..+++
T Consensus 266 ~~s~s~d-~~v~iwd~~~~~ 284 (435)
T 4e54_B 266 LATASVD-QTVKIWDLRQVR 284 (435)
T ss_dssp EEEEETT-SBCCEEETTTCC
T ss_pred EEEecCc-ceeeEEeccccc
Confidence 6555455 677777776643
No 298
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.11 E-value=0.02 Score=59.15 Aligned_cols=99 Identities=17% Similarity=0.127 Sum_probs=63.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEE--eCCEEEEEEeeC---------CEE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQ---------KTG 172 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~--~g~~LyqlTwk~---------~~v 172 (276)
......+.|+|||+.+.+++ ....|+.||+++|++.....-....+ .++++ ++..|....... +.+
T Consensus 378 ~~~~~~~~~SpDG~~la~~~--~~~~v~~~d~~tg~~~~~~~~~~~~v-~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 378 LGNVFAMGVDRNGKFAVVAN--DRFEIMTVDLETGKPTVIERSREAMI-TDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp CCSEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCC-CCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred ccceeeeEECCCCCEEEEEC--CCCeEEEEECCCCceEEeccCCCCCc-cceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 34567899999987554444 45699999999999866653232221 23444 455665555443 699
Q ss_pred EEEeCCCCcEEEEEecCCCC--eeEEeeCCCEEEEE
Q 023864 173 FIYDQNNLNKLEEFTHQMKD--GWGLATDGKVLFGS 206 (276)
Q Consensus 173 ~V~D~~tlk~i~~~~~~~~E--GWGLT~Dg~~L~vS 206 (276)
+++|.++.+ +.++.-.... ...+++||+.|+..
T Consensus 455 ~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 455 HVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred EEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence 999999877 4444322112 23478899988764
No 299
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.11 E-value=0.085 Score=49.92 Aligned_cols=155 Identities=14% Similarity=0.032 Sum_probs=94.7
Q ss_pred CEEEEEcCCCCCCeEEEEeC-CCCcEEEEeecCC-CceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCCcEEEEEecCC-
Q 023864 116 DTLFESTGLYGRSSVRRVAL-ETGKVEAINQMEG-SYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM- 190 (276)
Q Consensus 116 g~LyeStG~yg~S~I~~iDl-~tgkv~~~~~l~~-~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~- 190 (276)
|+|.-+.+.--+..|+.|++ ++|+.+....+-. ..-..-++.. ++.+.+-.-.++++-++|.+|.+.++++.-..
T Consensus 145 g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~ 224 (356)
T 2w18_A 145 RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS 224 (356)
T ss_dssp TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-
T ss_pred CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc
Confidence 44443322224778888888 5587766654332 2222334442 35777777899999999999999999996320
Q ss_pred ----CCeeEEeeCCCEEEE-----------EC-CCceEEEEcCCCCcEEEEEEee-eCCEeeeeeeeeEEECCEEEEEeC
Q 023864 191 ----KDGWGLATDGKVLFG-----------SD-GSSMLYQIDPQTLKVIRKDIVR-YKGREVRNLNELEFIKGEVWANVW 253 (276)
Q Consensus 191 ----~EGWGLT~Dg~~L~v-----------SD-GS~~L~viDp~t~~vi~~I~V~-~~g~pv~~lNELE~idG~lyANvw 253 (276)
-....+++||+.+.. |- ...+|..+|+++.+.++...+. .+|+....+ +-.+ +|.+.|.--
T Consensus 225 ~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l-sg~~-sg~~lASgS 302 (356)
T 2w18_A 225 YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFL-EGDV-KDHCAAAIL 302 (356)
T ss_dssp --CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEE-EEEE-ETTEEEEEE
T ss_pred ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeE-cccc-CCCEEEEEc
Confidence 012368899988754 11 2568888999999888765543 234321111 1111 134556655
Q ss_pred CCCCeEEEEeCCCCcEEEEEE
Q 023864 254 QVWPCIPYAYLQAFGSSLVYV 274 (276)
Q Consensus 254 ~s~d~I~vIDp~T~~v~l~~~ 274 (276)
.+ ..|-+-|.++|+.+ .++
T Consensus 303 ~D-gTIkIWDl~tGk~l-~tL 321 (356)
T 2w18_A 303 TS-GTIAIWDLLLGQCT-ALL 321 (356)
T ss_dssp TT-SCEEEEETTTCSEE-EEE
T ss_pred CC-CcEEEEECCCCcEE-EEe
Confidence 56 78888999996643 443
No 300
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.06 E-value=0.038 Score=49.29 Aligned_cols=148 Identities=12% Similarity=0.111 Sum_probs=92.2
Q ss_pred CCEEEEEcCCCCCCeEEEEeCCC--CcEEEEeecC-CCceEEEEEEeCCEEEEEEee----------CCEEEEEeCCCCc
Q 023864 115 NDTLFESTGLYGRSSVRRVALET--GKVEAINQME-GSYFGEGLTLLGEKLFQVTWL----------QKTGFIYDQNNLN 181 (276)
Q Consensus 115 dg~LyeStG~yg~S~I~~iDl~t--gkv~~~~~l~-~~~FgEGit~~g~~LyqlTwk----------~~~v~V~D~~tlk 181 (276)
+++||.-.| +..+.+.+||+.+ .+-....++| ....+-+++..+++||++-=. -+.+.+||+.+.+
T Consensus 19 ~~~iyv~GG-~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLG-SAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECG-GGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeC-cCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 689999766 5667899999984 6665555677 444556778889999997433 3679999998765
Q ss_pred E--EEEEe-cCCCCeeEEeeCCCEEEEECC----------------------------------------CceEEEEcCC
Q 023864 182 K--LEEFT-HQMKDGWGLATDGKVLFGSDG----------------------------------------SSMLYQIDPQ 218 (276)
Q Consensus 182 ~--i~~~~-~~~~EGWGLT~Dg~~L~vSDG----------------------------------------S~~L~viDp~ 218 (276)
- +...+ .+ ..+-+++..+..||+--| .+.++++|++
T Consensus 98 W~~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 98 WVKLMSHAPMG-MAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEECSCCCSSC-CSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred EEECCCCCCcc-cccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 3 33333 33 355555556667777544 2689999999
Q ss_pred CCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeC------CCCCeEEEEeC--CCCc
Q 023864 219 TLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW------QVWPCIPYAYL--QAFG 268 (276)
Q Consensus 219 t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw------~s~d~I~vIDp--~T~~ 268 (276)
+.+-...-......+ .---+...+++||+-=. .+ +.+.+.|+ ++.+
T Consensus 177 ~~~W~~~~~~p~~~~---~~~~~~~~~~~iyv~GG~~~~~~~~-~~v~~~d~d~~~~~ 230 (357)
T 2uvk_A 177 TQQWSYAGESPWYGT---AGAAVVNKGDKTWLINGEAKPGLRT-DAVFELDFTGNNLK 230 (357)
T ss_dssp TTEEEEEEECSSCCC---BSCEEEEETTEEEEECCEEETTEEC-CCEEEEECC---CE
T ss_pred CCcEEECCCCCCCCc---ccccEEEECCEEEEEeeecCCCccc-CceEEEEecCCCCc
Confidence 987654322211101 10124456777775421 25 67777764 6643
No 301
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.05 E-value=0.029 Score=48.62 Aligned_cols=115 Identities=6% Similarity=0.020 Sum_probs=74.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCC--cEEEEeecCCCceEEEEEEeC---CEEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETG--KVEAINQMEGSYFGEGLTLLG---EKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tg--kv~~~~~l~~~~FgEGit~~g---~~LyqlTwk~~~v~V~D~~ 178 (276)
...+..+.|++||+++.+++ .+..|+.||++++ +.+.... +..---..+++.. +++....=.++++.++|.+
T Consensus 9 ~~~V~~~~~s~~g~~las~s--~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCS--SDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCceEEEEECCCCCEEEEEe--CCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 44567899999998887777 6788999999754 4433322 1111123555531 4555556678999999998
Q ss_pred CCc--EEEEEecCCC--CeeEEeeC--CCEEEEECCCceEEEEcCCCCc
Q 023864 179 NLN--KLEEFTHQMK--DGWGLATD--GKVLFGSDGSSMLYQIDPQTLK 221 (276)
Q Consensus 179 tlk--~i~~~~~~~~--EGWGLT~D--g~~L~vSDGS~~L~viDp~t~~ 221 (276)
+.+ .+.++..... ....+.++ |+.|.....+..|.++|..+.+
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 764 4445532111 22345566 7788877778899999987653
No 302
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.01 E-value=0.035 Score=55.37 Aligned_cols=154 Identities=12% Similarity=0.047 Sum_probs=100.0
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC----CceEEEEEEe-CCEEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG----SYFGEGLTLL-GEKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~----~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~ 178 (276)
...+..+..+++|+||.+|. .-|.++|++++++......+. ..+.-.+..+ +++||+.|..++ ++.||++
T Consensus 449 ~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~ 523 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPD 523 (781)
T ss_dssp CCCEEEEEECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTT
T ss_pred CCeEEEEEECCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCC
Confidence 45667888888899999875 469999999987654433220 2234466665 589999998555 7889987
Q ss_pred CCcEEEEEecC----CCCeeEEeeCC-CEEEEECCCceE-EEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEE
Q 023864 179 NLNKLEEFTHQ----MKDGWGLATDG-KVLFGSDGSSML-YQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWAN 251 (276)
Q Consensus 179 tlk~i~~~~~~----~~EGWGLT~Dg-~~L~vSDGS~~L-~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyAN 251 (276)
+.+ ...+... ...=..+..|. ..||++-. +-| +.+|+++.+.. .... .+|-+-..++.+... +|.||+.
T Consensus 524 ~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~-~~~~-~~gl~~~~i~~i~~d~~g~lW~~ 599 (781)
T 3v9f_A 524 MQL-VRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQ-VFQR-KEGLPNTHIRAISEDKNGNIWAS 599 (781)
T ss_dssp CCE-EEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCE-EECG-GGTCSCCCCCEEEECSSSCEEEE
T ss_pred CCe-EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEE-Eccc-cCCCCCceEEEEEECCCCCEEEE
Confidence 754 3445422 11224566543 46777543 567 99999987643 2222 345444445555444 6899988
Q ss_pred eCCCCCeEEEEeCCCCcE
Q 023864 252 VWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 252 vw~s~d~I~vIDp~T~~v 269 (276)
- . +-|.++||++++.
T Consensus 600 t--~-~Gl~~~~~~~~~~ 614 (781)
T 3v9f_A 600 T--N-TGISCYITSKKCF 614 (781)
T ss_dssp C--S-SCEEEEETTTTEE
T ss_pred c--C-CceEEEECCCCce
Confidence 6 3 6699999998543
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.01 E-value=0.055 Score=50.65 Aligned_cols=151 Identities=15% Similarity=0.187 Sum_probs=89.0
Q ss_pred CceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-----CceEEEEEEe-----CCEEEEEE--eeCCEEE
Q 023864 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-----SYFGEGLTLL-----GEKLFQVT--WLQKTGF 173 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-----~~FgEGit~~-----g~~LyqlT--wk~~~v~ 173 (276)
...||+|.+||+||++.- ....|++++.++|+......++. .--.-||+++ ++.||+.- ...+++.
T Consensus 33 ~P~~ia~~pdG~llVter--~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSR--DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SEEEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CceEEEEcCCCcEEEEEe--cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345999999999998632 56789999988887643333331 1123488986 57899863 2457788
Q ss_pred EEeCCC----------CcE-EEEEecCCCCe----eEEeeCCCEEEEECC--------------CceEEEEcCCCCcEEE
Q 023864 174 IYDQNN----------LNK-LEEFTHQMKDG----WGLATDGKVLFGSDG--------------SSMLYQIDPQTLKVIR 224 (276)
Q Consensus 174 V~D~~t----------lk~-i~~~~~~~~EG----WGLT~Dg~~L~vSDG--------------S~~L~viDp~t~~vi~ 224 (276)
.+.... .+. +..++.. ..+ ..+.+|| .||++-| ..+|.-||+..- +-.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~-~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~-ip~ 187 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKG-VIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE-PAP 187 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCC-SSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS-BCT
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCC-CCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCC-ccC
Confidence 776543 222 2334432 223 3356787 6999865 247777776531 100
Q ss_pred -----EEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCC--CCeEEEEe
Q 023864 225 -----KDIVRYKGREVRNLNELEFI-KGEVWANVWQV--WPCIPYAY 263 (276)
Q Consensus 225 -----~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s--~d~I~vID 263 (276)
...|-..| +.|++.|.+. +|.||+.--.. +|.|-+|-
T Consensus 188 ~nPf~~~~i~a~G--~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 188 GNPFPGSPVYSYG--HRNVQGLAWDDKQRLFASEFGQDTWDELNAIK 232 (347)
T ss_dssp TCSSTTCCEEEBC--CSBCCEEEECTTCCEEEEECCSSSCEEEEEEC
T ss_pred CCCCCCCeEEeeC--CCCcceEEECCCCCEEEEecCCCCCceeeEEc
Confidence 00111112 2467778877 68899766443 14565553
No 304
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.00 E-value=0.011 Score=51.81 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=73.9
Q ss_pred EEEEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCC-ceEEEEEEe---CCEEEEEEeeCC
Q 023864 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLL---GEKLFQVTWLQK 170 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~-~FgEGit~~---g~~LyqlTwk~~ 170 (276)
+++++-......+..+.|++||+++.+++ .+..|+.||+++++......+..+ ---..+++. ++.+...-=.++
T Consensus 4 ~~~~~~~~H~~~V~~v~~s~~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 4 VINTVDTSHEDMIHDAQMDYYGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp ----------CCEEEEEECGGGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred eeeeecccccCeEEEeeEcCCCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 44444333356678999999998887777 778999999998864222223211 112345553 134444455689
Q ss_pred EEEEEeCCCCc--EEEEEe-cC-CCCeeEEeeC--CCEEEEECCCceEEEEcCCCC
Q 023864 171 TGFIYDQNNLN--KLEEFT-HQ-MKDGWGLATD--GKVLFGSDGSSMLYQIDPQTL 220 (276)
Q Consensus 171 ~v~V~D~~tlk--~i~~~~-~~-~~EGWGLT~D--g~~L~vSDGS~~L~viDp~t~ 220 (276)
++.+||..+.+ .+.++. +. .-....+.+| |..|.....+..|.++|..+.
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 99999998763 445553 11 1234456677 667777666778888887765
No 305
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.00 E-value=0.039 Score=54.77 Aligned_cols=158 Identities=13% Similarity=0.044 Sum_probs=91.9
Q ss_pred CCceEEEEecCCE-EEEEcCCC--CCCeEEEEeCCCC--c-EEEEeecCCCceEEEEEEeCCEEEEEEee---CCEEEEE
Q 023864 105 AFTQGLLYAENDT-LFESTGLY--GRSSVRRVALETG--K-VEAINQMEGSYFGEGLTLLGEKLFQVTWL---QKTGFIY 175 (276)
Q Consensus 105 aFTQGL~~~~dg~-LyeStG~y--g~S~I~~iDl~tg--k-v~~~~~l~~~~FgEGit~~g~~LyqlTwk---~~~v~V~ 175 (276)
.|..++.+++||+ |+.+.... +.+.|..+|++++ + . ..+.-+....-.-+..++++||.++.. +.+++++
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~-~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV-TALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC-EEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEE
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc-EEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEE
Confidence 3567999999985 55444322 4679999999988 4 3 232222211111245678999999985 4579999
Q ss_pred eCCCCc-EEEEE-ecCCCCe-eEEeeCCCEEEEE---CCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-E
Q 023864 176 DQNNLN-KLEEF-THQMKDG-WGLATDGKVLFGS---DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-E 247 (276)
Q Consensus 176 D~~tlk-~i~~~-~~~~~EG-WGLT~Dg~~L~vS---DGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~ 247 (276)
|.++.+ ...++ +.. .+- .+++.+++.|+++ ||..+|+++|+. .+..+.+.....+. +..+.+. || +
T Consensus 347 d~~~~~~~~~~l~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~----v~~~~~s~d~~~ 420 (741)
T 1yr2_A 347 DLSGSTPRFDTVVPES-KDNLESVGIAGNRLFASYIHDAKSQVLAFDLD-GKPAGAVSLPGIGS----ASGLSGRPGDRH 420 (741)
T ss_dssp ECSSSSCEEEEEECCC-SSEEEEEEEEBTEEEEEEEETTEEEEEEEETT-SCEEEECBCSSSCE----EEEEECCBTCSC
T ss_pred eCCCCccccEEEecCC-CCeEEEEEEECCEEEEEEEECCEEEEEEEeCC-CCceeeccCCCCeE----EEEeecCCCCCE
Confidence 998852 33333 322 111 1344446666653 588899999975 44555554322222 1222221 34 4
Q ss_pred EEEE--eCCCCCeEEEEeCCCCcE
Q 023864 248 VWAN--VWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 248 lyAN--vw~s~d~I~vIDp~T~~v 269 (276)
|+.. -+.+...|.++|.++++.
T Consensus 421 l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 421 AYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEEcCCCCCCEEEEEECCCCcE
Confidence 5533 344424788999988764
No 306
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.99 E-value=0.034 Score=50.51 Aligned_cols=140 Identities=8% Similarity=0.010 Sum_probs=91.0
Q ss_pred CEEEEEcCCC-----------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEe---eCCEEEEEeCCCCc
Q 023864 116 DTLFESTGLY-----------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---LQKTGFIYDQNNLN 181 (276)
Q Consensus 116 g~LyeStG~y-----------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTw---k~~~v~V~D~~tlk 181 (276)
+.||.+.-.. .+..|++++++.++...-..- .+--+++.+++||-..+ .+..++..|.+.-.
T Consensus 65 ~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~ 140 (302)
T 3s25_A 65 NYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE 140 (302)
T ss_dssp SEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC
T ss_pred CEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC
Confidence 5777765432 256899999998863322221 23357889999999883 56788889987543
Q ss_pred EEEEEecCCCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCCCCCeEE
Q 023864 182 KLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQVWPCIP 260 (276)
Q Consensus 182 ~i~~~~~~~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~s~d~I~ 260 (276)
..++.-...+ .+.++|+.||-+| |..+|++++.+..... +| . .+.... + +-..+|+||-.-|.....|.
T Consensus 141 -~~~lt~~~~~--~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l-~-~~~~~~--~--~~P~g~~iy~t~~~~~~~I~ 210 (302)
T 3s25_A 141 -KKKIKNHYLF--TCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LF-Y-DCNCYK--P--VVLDDTNVYYMDVNRDNAIV 210 (302)
T ss_dssp -CEEEESSCCC--CSEEETTEEEEECTTTCCEEEEETTTTEEE-EE-E-CSCEEE--E--EEEETTEEEEEEGGGTTEEE
T ss_pred -eEEEeCCCce--EeeEECCEEEEEeCCCceEEEEECCCCCEE-EE-e-CCCccc--e--eeecCCEEEEEEcCCCcEEE
Confidence 3444322112 3578999998766 7999999998876543 34 2 222211 1 11368888877776525899
Q ss_pred EEeCCCCcE
Q 023864 261 YAYLQAFGS 269 (276)
Q Consensus 261 vIDp~T~~v 269 (276)
++|+.....
T Consensus 211 ~~~ldG~~~ 219 (302)
T 3s25_A 211 HVNINNPNP 219 (302)
T ss_dssp EECSSSCCC
T ss_pred EEECCCCCe
Confidence 999887653
No 307
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.99 E-value=0.028 Score=56.27 Aligned_cols=152 Identities=13% Similarity=0.060 Sum_probs=95.3
Q ss_pred CCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCCcEEEEee----cCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCC
Q 023864 105 AFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQ----MEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 105 aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tgkv~~~~~----l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~ 178 (276)
..+..+..+++|+ ||.+|- + .-|.++|.+++++..-.. ++.. .--.+..+ +++||+.|. +-+++||++
T Consensus 406 ~~v~~i~~d~~g~~lWigt~--~-~Gl~~~d~~~~~~~~~~~~~~~l~~~-~v~~i~~d~~g~lwigt~--~Gl~~~~~~ 479 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTH--A-GGLSILHRNSGQVENFNQRNSQLVNE-NVYAILPDGEGNLWLGTL--SALVRFNPE 479 (795)
T ss_dssp SCEEEEEEETTTTEEEEEET--T-TEEEEEETTTCCEEEECTTTSCCSCS-CEEEEEECSSSCEEEEES--SCEEEEETT
T ss_pred ccEEEEEEcCCCCEEEEEeC--c-CceeEEeCCCCcEEEeecCCCCcCCC-eeEEEEECCCCCEEEEec--CceeEEeCC
Confidence 4467888888898 998764 2 359999999998754322 2222 23356665 589999997 458999998
Q ss_pred CCcEEEEEecC-------CCCeeEEeeCC-CEEEEECCCceEEEEcCCCCcEEEEEEe--eeCCEeeeeeeeeEEE-CCE
Q 023864 179 NLNKLEEFTHQ-------MKDGWGLATDG-KVLFGSDGSSMLYQIDPQTLKVIRKDIV--RYKGREVRNLNELEFI-KGE 247 (276)
Q Consensus 179 tlk~i~~~~~~-------~~EGWGLT~Dg-~~L~vSDGS~~L~viDp~t~~vi~~I~V--~~~g~pv~~lNELE~i-dG~ 247 (276)
+.+.. .+... ...=..+..|. ..||++.. +-|+.+|+++.+. .+.. ..++.+-..++-+... +|.
T Consensus 480 ~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~ 555 (795)
T 4a2l_A 480 QRSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGI 555 (795)
T ss_dssp TTEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSC
T ss_pred CCeEE-EccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCC
Confidence 76542 23211 01123455543 46777554 6799999988765 2221 1122333345555443 689
Q ss_pred EEEEeCCCCCeEEEEeCCCCcE
Q 023864 248 VWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 248 lyANvw~s~d~I~vIDp~T~~v 269 (276)
||+.-. +-|.++|+++++.
T Consensus 556 lWigT~---~Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 556 IWVGTR---EGFYCFNEKDKQI 574 (795)
T ss_dssp EEEEES---SCEEEEETTTTEE
T ss_pred EEEEeC---CCceeECCCCCcE
Confidence 998764 4599999998543
No 308
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.96 E-value=0.0044 Score=61.14 Aligned_cols=127 Identities=10% Similarity=0.033 Sum_probs=81.1
Q ss_pred EEEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEe-eC-----
Q 023864 97 NEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTW-LQ----- 169 (276)
Q Consensus 97 ~~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTw-k~----- 169 (276)
...|.....|..|..+..||+||...| +..+.+.+||+.+++-....+++.....-+++.. +++||++-= .+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~g~lyv~GG-~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 235 TVTVTKHDMFCPGISMDGNGQIVVTGG-NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp EEEECSCCCSSCEEEECTTSCEEEECS-SSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCC
T ss_pred cccCCCCCCccccccCCCCCCEEEeCC-CCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCccc
Confidence 445554566777888888899999777 4566899999999987665566654444566776 899999865 22
Q ss_pred CEEEEEeCCCCcEEEE-----EecCCCCeeEEeeCCCEEEE----------ECCCceEEEEcCCCCcEEE
Q 023864 170 KTGFIYDQNNLNKLEE-----FTHQMKDGWGLATDGKVLFG----------SDGSSMLYQIDPQTLKVIR 224 (276)
Q Consensus 170 ~~v~V~D~~tlk~i~~-----~~~~~~EGWGLT~Dg~~L~v----------SDGS~~L~viDp~t~~vi~ 224 (276)
+.+.+||+.+.+-... .+......-++...+..+|+ .+..+.+..+|+++.+...
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 6799999987654321 11111000011112222222 2346789999999887654
No 309
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=96.95 E-value=0.052 Score=51.69 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=103.2
Q ss_pred EEEEEEecC-----CCCCceEEEEe-c-------CCEEEEEcCCCCCCeEEEEeCCCCcEEEEe---ecC----------
Q 023864 94 QVVNEFPHD-----PRAFTQGLLYA-E-------NDTLFESTGLYGRSSVRRVALETGKVEAIN---QME---------- 147 (276)
Q Consensus 94 ~Vv~~~Phd-----~~aFTQGL~~~-~-------dg~LyeStG~yg~S~I~~iDl~tgkv~~~~---~l~---------- 147 (276)
+++++|+.+ +..|.+.|.++ - ++..|.+.- +...|.+||+++|+.-+.. ..+
T Consensus 136 ~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~--~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G 213 (381)
T 3q6k_A 136 PEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF--LRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGG 213 (381)
T ss_dssp CEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET--TTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETT
T ss_pred eeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC--CCCcEEEEECCCCcEEEEccCCCccccCcceEECC
Confidence 889998764 45677899998 2 357898754 7789999999999754432 111
Q ss_pred ------CCceEEEEEEe----CCEEEEEEeeCCEEEEEeCC---------CCcEEEEEecCCCCeeEEeeC--CCEEEEE
Q 023864 148 ------GSYFGEGLTLL----GEKLFQVTWLQKTGFIYDQN---------NLNKLEEFTHQMKDGWGLATD--GKVLFGS 206 (276)
Q Consensus 148 ------~~~FgEGit~~----g~~LyqlTwk~~~v~V~D~~---------tlk~i~~~~~~~~EGWGLT~D--g~~L~vS 206 (276)
.+.||..|..+ +..||-..--+.+.|.+..+ ..+.+++-. +..+|-|++.| ...||.+
T Consensus 214 ~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg-~~s~~~~~~~D~~~G~ly~~ 292 (381)
T 3q6k_A 214 KEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG-KYNDAIALAYDPKTKVIFFA 292 (381)
T ss_dssp EEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC-TTCCEEEEEECTTTCEEEEE
T ss_pred EEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC-CCCCcceEEEeCCCCeEEEE
Confidence 35554444334 56899888888899988743 223333332 12588888776 4789999
Q ss_pred C-CCceEEEEcCCC--C--cEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEe
Q 023864 207 D-GSSMLYQIDPQT--L--KVIRKDIVRYKGREVRNLNELEFI-KGEVWANV 252 (276)
Q Consensus 207 D-GS~~L~viDp~t--~--~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANv 252 (276)
+ ..+.|..+|+++ + +-. .+-+.+. .+..++.|-+. +|+||+..
T Consensus 293 ~~~~~aI~~w~~~~~~~~~~n~-~~l~~d~--~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 293 EANTKQVSCWNTQKMPLRMKNT-DVVYTSS--RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ESSSSEEEEEETTSCSBCGGGE-EEEEECT--TCCSEEEEEECTTSCEEEEE
T ss_pred eccCCeEEEEeCCCCccccCce-EEEEECC--CccccCeEEECCCCeEEEEE
Confidence 9 899999999986 2 112 2333332 45577777764 78899765
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.032 Score=56.12 Aligned_cols=151 Identities=6% Similarity=-0.033 Sum_probs=100.5
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCc----eEEEEEE--eCCEEEEEEeeCCEEEEEeC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----FGEGLTL--LGEKLFQVTWLQKTGFIYDQ 177 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~----FgEGit~--~g~~LyqlTwk~~~v~V~D~ 177 (276)
..+...+.|+|||.++.+++ .+..|+.||.++ .+.... ...+ =...+++ +|+.|+..+ .++++-+||.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s--~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs-~DGtVkIWd~ 158 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLS--NNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN-EDGELQFFSI 158 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEE--TTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE-TTSEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEe--CCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc-CCCEEEEEEC
Confidence 67889999999999887777 777899999654 444434 3221 1335555 345555554 5899999999
Q ss_pred CCCc-------EEEEEecC------CCCeeEEeeCCCEEEEECCCceEEEEcCCCCcE---EEEEEeeeCCEeeeeeeee
Q 023864 178 NNLN-------KLEEFTHQ------MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV---IRKDIVRYKGREVRNLNEL 241 (276)
Q Consensus 178 ~tlk-------~i~~~~~~------~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~v---i~~I~V~~~g~pv~~lNEL 241 (276)
.+.+ .+.+++.. .-.....+||| |..+-+++.|+++|.++.+. .+++. .++. ..+..+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~---~~h~-~~V~sv 232 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ---NASR-RKITDL 232 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE---CCCS-SCCCCE
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec---cccc-CcEEEE
Confidence 9876 36777522 11233356788 66666789999999988773 23332 1111 246677
Q ss_pred EEECCEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 242 EFIKGEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 242 E~idG~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.|.++.|-+.. . +.|.+.|.++++.
T Consensus 233 aFsg~~LASa~--~-~tIkLWd~~~~~~ 257 (588)
T 2j04_A 233 KIVDYKVVLTC--P-GYVHKIDLKNYSI 257 (588)
T ss_dssp EEETTEEEEEC--S-SEEEEEETTTTEE
T ss_pred EEECCEEEEEe--C-CeEEEEECCCCeE
Confidence 78854555443 5 7899999998665
No 311
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.87 E-value=0.14 Score=45.10 Aligned_cols=124 Identities=10% Similarity=0.060 Sum_probs=74.5
Q ss_pred EEEEEEecC-CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCC-------cEEEEeecCCCceEEEEEEeC-CEEEE
Q 023864 94 QVVNEFPHD-PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETG-------KVEAINQMEGSYFGEGLTLLG-EKLFQ 164 (276)
Q Consensus 94 ~Vv~~~Phd-~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tg-------kv~~~~~l~~~~FgEGit~~g-~~Lyq 164 (276)
+.+..+... ...-+..+.|+|++.++.+++ .+..|+.||++++ +.+.... +..---..+++.. +++..
T Consensus 47 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~la 123 (330)
T 2hes_X 47 TLIDVLDETAHKKAIRSVAWRPHTSLLAAGS--FDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLA 123 (330)
T ss_dssp EEEEEECTTCCCSCEEEEEECTTSSEEEEEE--TTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEE
T ss_pred EEEEEEecCCccCCEEEEEECCCCCEEEEEe--CCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEE
Confidence 455555321 244567999999998877766 6789999998643 2222221 1111223556653 44455
Q ss_pred EEeeCCEEEEEeCCC----CcEEEEEecCCC--CeeEEeeCCCEEEEECCCceEEEEcCCCC
Q 023864 165 VTWLQKTGFIYDQNN----LNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTL 220 (276)
Q Consensus 165 lTwk~~~v~V~D~~t----lk~i~~~~~~~~--EGWGLT~Dg~~L~vSDGS~~L~viDp~t~ 220 (276)
..-.++++.+||..+ .+.+..+.-... ....+.+|++.|+....+..|.++|..+.
T Consensus 124 s~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp EEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred EEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 555789999999842 345555542211 22335688988887766778888887655
No 312
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.84 E-value=0.019 Score=57.06 Aligned_cols=154 Identities=18% Similarity=0.206 Sum_probs=86.9
Q ss_pred ceEEEEecCCE-EEEEcCCCCC--CeEEEEeCCCCcEEEEeecCCCceEEEEEEeC-CEEEEEEeeCC------------
Q 023864 107 TQGLLYAENDT-LFESTGLYGR--SSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQK------------ 170 (276)
Q Consensus 107 TQGL~~~~dg~-LyeStG~yg~--S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g-~~LyqlTwk~~------------ 170 (276)
..++.|+|||+ |..+...-|. ..|+++|+++|+.+.. .++...| .++++.. +.||.....+.
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEES-CCCEESTTSEEEEEECCCC--------CCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCcee-ccEEEECCCEEEEEEecCcccccccccCCCC
Confidence 35789999986 3222211133 5799999999987553 2221111 2455543 56777665433
Q ss_pred -EEEEEeCCCCcEEEE--EecCC----CCeeEEeeCCCEEEE-E-CC---CceEEEEcCCCCcE--EEEEEeeeCCEeee
Q 023864 171 -TGFIYDQNNLNKLEE--FTHQM----KDGWGLATDGKVLFG-S-DG---SSMLYQIDPQTLKV--IRKDIVRYKGREVR 236 (276)
Q Consensus 171 -~v~V~D~~tlk~i~~--~~~~~----~EGWGLT~Dg~~L~v-S-DG---S~~L~viDp~t~~v--i~~I~V~~~g~pv~ 236 (276)
+++++|..+.+...+ +..+. -.+..+++||++|++ + ++ .+.|+++|.++... .+.+....++..
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-- 320 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-- 320 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE--
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE--
Confidence 589999887763222 22111 124457899998766 3 33 56999999987621 344443332211
Q ss_pred eeeeeEEECCEEEEEe-CC--CCCeEEEEeCCCC
Q 023864 237 NLNELEFIKGEVWANV-WQ--VWPCIPYAYLQAF 267 (276)
Q Consensus 237 ~lNELE~idG~lyANv-w~--s~d~I~vIDp~T~ 267 (276)
.. ..-.+++||..- -. . ..|.++|.+++
T Consensus 321 ~~--~~~dg~~l~~~s~~~~~~-~~l~~~d~~~~ 351 (741)
T 1yr2_A 321 DF--VDGVGDQLWFVSGDGAPL-KKIVRVDLSGS 351 (741)
T ss_dssp EE--EEEETTEEEEEECTTCTT-CEEEEEECSSS
T ss_pred EE--EeccCCEEEEEECCCCCC-CEEEEEeCCCC
Confidence 11 122355666433 21 2 46999998875
No 313
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.82 E-value=0.032 Score=55.66 Aligned_cols=154 Identities=14% Similarity=0.050 Sum_probs=95.0
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEee--cCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCCc
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ--MEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN 181 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~--l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tlk 181 (276)
..+..|..+.+|.||.+|- + .-|.++|.+++++..-.. ++.. .--.+..+ +++||+.|. +-+++||+++.+
T Consensus 407 ~~v~~i~~d~~g~lWigt~--~-~Gl~~~~~~~~~~~~~~~~~~~~~-~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTY--L-GNISYYNTRLKKFQIIELEKNELL-DVRVFYEDKNKKIWIGTH--AGVFVIDLASKK 480 (781)
T ss_dssp SBEEEEEECTTSCEEEEET--T-EEEEEECSSSCEEEECCSTTTCCC-CEEEEEECTTSEEEEEET--TEEEEEESSSSS
T ss_pred cceEEEEECCCCCEEEEec--c-CCEEEEcCCCCcEEEeccCCCCCC-eEEEEEECCCCCEEEEEC--CceEEEeCCCCe
Confidence 4456788887899998763 2 469999999998744321 2222 22356665 589999997 569999998765
Q ss_pred EEEEEecC-----CCCeeEEeeCC-CEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCC
Q 023864 182 KLEEFTHQ-----MKDGWGLATDG-KVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (276)
Q Consensus 182 ~i~~~~~~-----~~EGWGLT~Dg-~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~ 254 (276)
...-...+ ...-..+..|. ..||++-..+-|+.+|+++.+... +.. .++.+-..++-+... +|.||+.-.
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~-~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK-FNQ-YEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEE-ECT-TTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred EEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE-ccC-CCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 43222111 11224455553 467775433459999998875443 221 234444445555443 789998764
Q ss_pred CCCeEEEEeCCCCc
Q 023864 255 VWPCIPYAYLQAFG 268 (276)
Q Consensus 255 s~d~I~vIDp~T~~ 268 (276)
. .-|.++|+++++
T Consensus 558 ~-Glv~~~d~~~~~ 570 (781)
T 3v9f_A 558 E-GLVCFPSARNFD 570 (781)
T ss_dssp T-EEEEESCTTTCC
T ss_pred C-CceEEECCCCCc
Confidence 3 333889998865
No 314
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.75 E-value=0.065 Score=46.35 Aligned_cols=168 Identities=8% Similarity=-0.045 Sum_probs=94.5
Q ss_pred EEEEEecCCCCCceEEEEecC--CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC-CCceEEEEEEeC---CEEEEEEee
Q 023864 95 VVNEFPHDPRAFTQGLLYAEN--DTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG---EKLFQVTWL 168 (276)
Q Consensus 95 Vv~~~Phd~~aFTQGL~~~~d--g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~g---~~LyqlTwk 168 (276)
.+.++.. ....+..+.|+++ |.++.|++ .+..|+.||+++++......+. ....-..+++.. +.+....-.
T Consensus 45 ~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~ 121 (297)
T 2pm7_B 45 LIDTLTG-HEGPVWRVDWAHPKFGTILASCS--YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS 121 (297)
T ss_dssp CCEEECC-CSSCEEEEEECCGGGCSEEEEEE--TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred EEEEEcc-ccCCeEEEEecCCCcCCEEEEEc--CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC
Confidence 4455542 2445679999753 77777777 7789999999988532211122 122234566643 355566667
Q ss_pred CCEEEEEeCCCCcE--EEEEecCCC--CeeEEeeC-------------CCEEEEECCCceEEEEcCCCCcEEEEEEeeeC
Q 023864 169 QKTGFIYDQNNLNK--LEEFTHQMK--DGWGLATD-------------GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK 231 (276)
Q Consensus 169 ~~~v~V~D~~tlk~--i~~~~~~~~--EGWGLT~D-------------g~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~ 231 (276)
++.+.+||..+.+. ...+.-... ....+.++ ++.|.....+..|.++|..+.+......-...
T Consensus 122 d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~ 201 (297)
T 2pm7_B 122 DGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE 201 (297)
T ss_dssp TSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC
T ss_pred CCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec
Confidence 89999999876532 122221100 11223343 45666655567899998877552211111112
Q ss_pred CEeeeeeeeeEEEC----CEEEEEeCCCCCeEEEEeCCCC
Q 023864 232 GREVRNLNELEFIK----GEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 232 g~pv~~lNELE~id----G~lyANvw~s~d~I~vIDp~T~ 267 (276)
|+. ..++.+.|.. +.+.|..-.+ ..|.+-|.+++
T Consensus 202 ~H~-~~V~~v~~sp~~~~~~~las~s~D-~~v~iWd~~~~ 239 (297)
T 2pm7_B 202 GHS-DWVRDVAWSPTVLLRSYMASVSQD-RTCIIWTQDNE 239 (297)
T ss_dssp CCS-SCEEEEEECCCCSSSEEEEEEETT-SCEEEEEESST
T ss_pred CCC-CceEEEEECCCCCCceEEEEEECC-CcEEEEEeCCC
Confidence 221 2345566653 4677777666 78888887663
No 315
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.65 E-value=0.025 Score=52.98 Aligned_cols=156 Identities=8% Similarity=-0.046 Sum_probs=92.0
Q ss_pred CCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEe--CCEEEEEEeeCCEEEEEeCCCC
Q 023864 104 RAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 104 ~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~--g~~LyqlTwk~~~v~V~D~~tl 180 (276)
.....++.|+|+ +.++.+++ .+..|+.||+++++..... .+..--.-.+++. ++.|+... .++++.+||.+ .
T Consensus 149 ~~~V~~v~~~p~~~~~las~s--~Dg~v~iwD~~~~~~~~~~-~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~-~ 223 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCL--ADGSIAVLQVTETVKVCAT-LPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPT-L 223 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEE--TTSCEEEEEESSSEEEEEE-ECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTT-C
T ss_pred CCceEEEEECCCCCCEEEEEE--CCCeEEEEEcCCCcceeec-cCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccC-C
Confidence 455689999997 67877776 6789999999998654332 2212223355554 45555554 78999999998 5
Q ss_pred cEEEEEecCC---C----CeeEEee--CCCEEEE-ECCC------ceEEEEcCCCC------cEEEEEEeee--CCEeee
Q 023864 181 NKLEEFTHQM---K----DGWGLAT--DGKVLFG-SDGS------SMLYQIDPQTL------KVIRKDIVRY--KGREVR 236 (276)
Q Consensus 181 k~i~~~~~~~---~----EGWGLT~--Dg~~L~v-SDGS------~~L~viDp~t~------~vi~~I~V~~--~g~pv~ 236 (276)
+...+++.+. . ....++. ++..+.+ +.+. ..+.++|..+. ..++.+.+.. .+...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~ 303 (434)
T 2oit_A 224 QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQH 303 (434)
T ss_dssp CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCC
T ss_pred cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCc
Confidence 6666665321 1 2234444 4444433 3232 23777775543 2334444421 122212
Q ss_pred eeeeeEEEC--CEEEEEeCCCCCeEEEEeCCC
Q 023864 237 NLNELEFIK--GEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 237 ~lNELE~id--G~lyANvw~s~d~I~vIDp~T 266 (276)
+. .+.++. +.++++.+.+ +.|.+|....
T Consensus 304 ~~-~~~~l~dw~l~~v~s~~s-~dv~vl~~~~ 333 (434)
T 2oit_A 304 HY-YLSYIEEWDLVLAASAAS-TEVSILARQS 333 (434)
T ss_dssp CE-EEEEEGGGTEEEEEETTC-SBCEEEEECT
T ss_pred ce-eeehhccCCEEEEecCCC-CceeEEEecC
Confidence 22 122332 4799999999 9999998654
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.61 E-value=0.026 Score=54.07 Aligned_cols=103 Identities=7% Similarity=0.044 Sum_probs=64.7
Q ss_pred EEEEEEe-CCEEEEEEeeCCEEEEEeCCCCcE--EEEEecC--CCC------eeEEeeC---CCEEEEECC---------
Q 023864 152 GEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNK--LEEFTHQ--MKD------GWGLATD---GKVLFGSDG--------- 208 (276)
Q Consensus 152 gEGit~~-g~~LyqlTwk~~~v~V~D~~tlk~--i~~~~~~--~~E------GWGLT~D---g~~L~vSDG--------- 208 (276)
+.+|++. +++||+.....+++++++..+.+. +..++-. .+. |.++.+| +.+||+++.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 5588886 469999887777999999765543 2333211 111 5666776 899999872
Q ss_pred ----CceEEEEcCC--CCcEE--EEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCC
Q 023864 209 ----SSMLYQIDPQ--TLKVI--RKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (276)
Q Consensus 209 ----S~~L~viDp~--t~~vi--~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~ 254 (276)
.++|+.++.. +.++. +.|-........++.+-|.+. ||+||++++.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 3578777643 23332 122212222234678888886 8899999874
No 317
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.017 Score=56.18 Aligned_cols=120 Identities=12% Similarity=0.108 Sum_probs=80.6
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcE-EEEeecCCCceEEEEE--EeC-C-EEEEEEeeCCEEEEEeCC
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKV-EAINQMEGSYFGEGLT--LLG-E-KLFQVTWLQKTGFIYDQN 178 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv-~~~~~l~~~~FgEGit--~~g-~-~LyqlTwk~~~v~V~D~~ 178 (276)
......+.|++++.|. +++ .+..|+.||+++++. ......-... -..++ ... + .++...=.++++.++|..
T Consensus 266 ~~~v~sv~~s~~~~la-sgs--~DgtV~lWD~~~~~~~~~~~~~H~~~-V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 266 DSLITTFDFLSPTTVV-CGF--KNGFVAEFDLTDPEVPSFYDQVHDSY-ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp TTCEEEEEESSSSEEE-EEE--TTSEEEEEETTBCSSCSEEEECSSSC-EEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred CCCEEEEEecCCCeEE-EEe--CCCEEEEEECCCCCCceEEeeccccc-EEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 3556789998766554 444 678999999998742 1222222221 23442 233 3 677777889999999999
Q ss_pred CCcEEEEEecCCC----CeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEE
Q 023864 179 NLNKLEEFTHQMK----DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDI 227 (276)
Q Consensus 179 tlk~i~~~~~~~~----EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~ 227 (276)
+.+.+.++.-... ....++||++.|..+++.+.|.++|..+++.+.++.
T Consensus 342 ~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 342 DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee
Confidence 8877665531111 245678899998888888899999999987655543
No 318
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.086 Score=51.15 Aligned_cols=166 Identities=7% Similarity=0.025 Sum_probs=101.2
Q ss_pred EEEecCCCCCceEEEEecC------CEEEEEcCCCCCCeEEEEeCCCCcEE----EEe-----ec-CCCceEEEEEEeCC
Q 023864 97 NEFPHDPRAFTQGLLYAEN------DTLFESTGLYGRSSVRRVALETGKVE----AIN-----QM-EGSYFGEGLTLLGE 160 (276)
Q Consensus 97 ~~~Phd~~aFTQGL~~~~d------g~LyeStG~yg~S~I~~iDl~tgkv~----~~~-----~l-~~~~FgEGit~~g~ 160 (276)
.++.|. ..-+..+.|+|+ +.++.|++ .+..|+.||+.+++.. ... .+ +..-....+++..+
T Consensus 201 ~~l~~~-~~~V~~v~wsp~~~~~~~~~~LAs~s--~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~ 277 (524)
T 2j04_B 201 QTIVHS-FGEVWDLKWHEGCHAPHLVGCLSFVS--QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP 277 (524)
T ss_dssp EEEEEC-CCSEEEEEECSSCCCSSSSCEEEEEE--TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS
T ss_pred EEEEec-CCcEEEEEECCCCCCCCCCceEEEEe--cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC
Confidence 344553 233578999986 46777777 6789999999887421 000 11 11122456676554
Q ss_pred EEEEEEeeCCEEEEEeCCCCc-EEEEEecCCCCeeEE----eeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEeeeCCEe
Q 023864 161 KLFQVTWLQKTGFIYDQNNLN-KLEEFTHQMKDGWGL----ATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGRE 234 (276)
Q Consensus 161 ~LyqlTwk~~~v~V~D~~tlk-~i~~~~~~~~EGWGL----T~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V~~~g~p 234 (276)
......-.++++.+||.++.+ +...+......=+.+ .+||..+++|- .+.+|.++|..+.+....+.-...+
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~-- 355 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG-- 355 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC--
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc--
Confidence 455566678999999998753 344454321233345 34563555544 5778999999887765544322111
Q ss_pred eeeeeeeEEEC-CEEEEEeCCCCCeEEEEeCCCCcE
Q 023864 235 VRNLNELEFIK-GEVWANVWQVWPCIPYAYLQAFGS 269 (276)
Q Consensus 235 v~~lNELE~id-G~lyANvw~s~d~I~vIDp~T~~v 269 (276)
.+++-+.|.. |..+|.--.. +.|-+.|.+++..
T Consensus 356 -~~v~~v~fsp~~~~l~s~~~d-~tv~lwd~~~~~~ 389 (524)
T 2j04_B 356 -SNLVPVVYCPQIYSYIYSDGA-SSLRAVPSRAAFA 389 (524)
T ss_dssp -CSCCCEEEETTTTEEEEECSS-SEEEEEETTCTTC
T ss_pred -CcccceEeCCCcCeEEEeCCC-CcEEEEECccccc
Confidence 1234556664 6667766566 7899999988763
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.40 E-value=0.13 Score=45.85 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=77.1
Q ss_pred EEEEecCCEEEEEcCC-C---C----CCeEEEEeCCCCcEEEEeecC-CCceEEEEEEeCCEEEEEEeeC----------
Q 023864 109 GLLYAENDTLFESTGL-Y---G----RSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQ---------- 169 (276)
Q Consensus 109 GL~~~~dg~LyeStG~-y---g----~S~I~~iDl~tgkv~~~~~l~-~~~FgEGit~~g~~LyqlTwk~---------- 169 (276)
+.+.. +++||+-.|. . + .+.+.+||+.+.+-.....++ ...++-+++..+++||++-=.+
T Consensus 60 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 138 (357)
T 2uvk_A 60 TSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFED 138 (357)
T ss_dssp EEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHH
T ss_pred eEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccc
Confidence 45555 5899987664 1 0 367999999999876655665 5556667777999999997532
Q ss_pred -----------------------------CEEEEEeCCCCc--EEEEEecCCCCeeEEeeCCCEEEEECC-------Cce
Q 023864 170 -----------------------------KTGFIYDQNNLN--KLEEFTHQMKDGWGLATDGKVLFGSDG-------SSM 211 (276)
Q Consensus 170 -----------------------------~~v~V~D~~tlk--~i~~~~~~~~EGWGLT~Dg~~L~vSDG-------S~~ 211 (276)
+.+.+||+.+.+ .+...+.+...+-+++..++.||+--| ++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 139 LNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDA 218 (357)
T ss_dssp HHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCC
T ss_pred hhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCc
Confidence 789999998765 444444432344677777778888654 567
Q ss_pred EEEEcC--CCCcEE
Q 023864 212 LYQIDP--QTLKVI 223 (276)
Q Consensus 212 L~viDp--~t~~vi 223 (276)
++.+|. ++.+-.
T Consensus 219 v~~~d~d~~~~~W~ 232 (357)
T 2uvk_A 219 VFELDFTGNNLKWN 232 (357)
T ss_dssp EEEEECC---CEEE
T ss_pred eEEEEecCCCCcEE
Confidence 877764 766543
No 320
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.38 E-value=0.32 Score=48.23 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=91.7
Q ss_pred CCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcEE
Q 023864 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (276)
Q Consensus 104 ~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~i 183 (276)
...+..+..+.+|.||.+|. +-|.+||..+++........... -..+...++.||+.|.. -++.||+.+.+.
T Consensus 62 ~~~i~~i~~d~~g~lWigT~----~Gl~~yd~~~~~f~~~~~~~~~~-i~~i~~~~g~lWigt~~--Gl~~~~~~~~~~- 133 (758)
T 3ott_A 62 NTRIYCGVIIDNTYLYMGTD----NGILVYNYRADRYEQPETDFPTD-VRTMALQGDTLWLGALN--GLYTYQLQSRKL- 133 (758)
T ss_dssp SSCEEEEEEETTTEEEEEET----TEEEEEETTTTEECCCSCCCCSC-EEEEEEETTEEEEEETT--EEEEEETTTCCE-
T ss_pred CceEEEEEEcCCCcEEEEeC----CCeEEEeCCCCEEECcccCCCce-EEEEEecCCcEEEEcCC--cceeEeCCCCeE-
Confidence 34567787888899999885 46899999998764311111111 12345568999999954 789999987553
Q ss_pred EEEe-----cCCCCeeEEeeC-CCEEEEECCCceEEEEcCCCCcEEEEEEeee-CCEeeeeeeeeEEE-C-CEEEEEeCC
Q 023864 184 EEFT-----HQMKDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFI-K-GEVWANVWQ 254 (276)
Q Consensus 184 ~~~~-----~~~~EGWGLT~D-g~~L~vSDGS~~L~viDp~t~~vi~~I~V~~-~g~pv~~lNELE~i-d-G~lyANvw~ 254 (276)
..+. .+...=+.+..| ...||+.-. +-|+.+|+++.+... +.... .+.+-..++.|... + +.||+...
T Consensus 134 ~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 134 TSFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EEECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EEeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 3441 111123456666 456777332 469999998876532 22111 11111124445444 3 46898763
Q ss_pred CCCeEEEEeCCCCc
Q 023864 255 VWPCIPYAYLQAFG 268 (276)
Q Consensus 255 s~d~I~vIDp~T~~ 268 (276)
+-+.++|+++++
T Consensus 211 --~Gl~~~~~~~~~ 222 (758)
T 3ott_A 211 --GYLFQYFPSTGQ 222 (758)
T ss_dssp --EEEEEEETTTTE
T ss_pred --CCCeEEcCCCCe
Confidence 468899998864
No 321
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.25 E-value=0.18 Score=49.44 Aligned_cols=153 Identities=11% Similarity=0.131 Sum_probs=86.6
Q ss_pred eEEEEecCCE-EEEEcCCC----------CCCeEEEEeCCCCcEE--EEeecCC---CceEEEEEEeCCEEEEEEeeC--
Q 023864 108 QGLLYAENDT-LFESTGLY----------GRSSVRRVALETGKVE--AINQMEG---SYFGEGLTLLGEKLFQVTWLQ-- 169 (276)
Q Consensus 108 QGL~~~~dg~-LyeStG~y----------g~S~I~~iDl~tgkv~--~~~~l~~---~~FgEGit~~g~~LyqlTwk~-- 169 (276)
.++.|++||+ |+.+...- +...|.++++.+++.. .....+. ..++-.++.+|..|+...+..
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 6899999985 44433211 2456999999998621 1122222 233333444566777766655
Q ss_pred -CEEEEEeCCCCcEEEEEecC-CCCeeEEeeCCCEEEE-EC---CCceEEEEcCCCCcE--EEEEEeeeCCEeeeeeeee
Q 023864 170 -KTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFG-SD---GSSMLYQIDPQTLKV--IRKDIVRYKGREVRNLNEL 241 (276)
Q Consensus 170 -~~v~V~D~~tlk~i~~~~~~-~~EGWGLT~Dg~~L~v-SD---GS~~L~viDp~t~~v--i~~I~V~~~g~pv~~lNEL 241 (276)
..++++|..+.+. .++... ...-.-+.+||+ ||+ +| +..+|+.+|.++.+. .+.+.-.... ..+..+
T Consensus 251 ~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~l~~~ 325 (695)
T 2bkl_A 251 ENDVYWKRPGEKDF-RLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS---ASLLSV 325 (695)
T ss_dssp EEEEEEECTTCSSC-EEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS---CEEEEE
T ss_pred ceEEEEEcCCCCce-EEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC---CeEEEE
Confidence 3788888765543 333322 112222457888 555 76 367999999988753 1222222112 234556
Q ss_pred EEECCEEEEEeCC--CCCeEEEEeCCC
Q 023864 242 EFIKGEVWANVWQ--VWPCIPYAYLQA 266 (276)
Q Consensus 242 E~idG~lyANvw~--s~d~I~vIDp~T 266 (276)
.+.+++|++..-. . ..|.++|+..
T Consensus 326 ~~~~~~lv~~~~~dg~-~~l~~~~~~g 351 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDAT-SEVRVATLKG 351 (695)
T ss_dssp EEETTEEEEEEEETTE-EEEEEEETTC
T ss_pred EEECCEEEEEEEECCE-EEEEEEeCCC
Confidence 6778887765432 2 4677788653
No 322
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.18 E-value=0.13 Score=46.62 Aligned_cols=152 Identities=10% Similarity=0.029 Sum_probs=87.6
Q ss_pred ecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeec---CC-CceEEEEEEe---------CCEEEEEEeeCCEEEEEeCCC
Q 023864 113 AENDTLFESTGLYGRSSVRRVALETGKVEAINQM---EG-SYFGEGLTLL---------GEKLFQVTWLQKTGFIYDQNN 179 (276)
Q Consensus 113 ~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l---~~-~~FgEGit~~---------g~~LyqlTwk~~~v~V~D~~t 179 (276)
.+++.++.+++ .+..|+.||.++++......+ .. .-+-..+++. ++++..-.=.++++.++|..+
T Consensus 98 ~~~~~~las~~--~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVC--QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEE--TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEe--CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 33455666666 788999999999977554433 21 2334455553 356666667899999999987
Q ss_pred CcEEEEE-ecCCCCeeE--EeeCCCE-EEEECCCceEEEEcCCCCcEEEEEEeeeCC--------------------Eee
Q 023864 180 LNKLEEF-THQMKDGWG--LATDGKV-LFGSDGSSMLYQIDPQTLKVIRKDIVRYKG--------------------REV 235 (276)
Q Consensus 180 lk~i~~~-~~~~~EGWG--LT~Dg~~-L~vSDGS~~L~viDp~t~~vi~~I~V~~~g--------------------~pv 235 (276)
.+.+..+ ... ..... +.|++.. |........|.++|..+.+...+..-.... ...
T Consensus 176 ~~~~~~~~~~~-~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 176 EGPILAGYPLS-SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TEEEEEEEECS-SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CceeeeecCCC-CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 7666554 433 34444 4577765 444556789999999988765443321100 001
Q ss_pred eeeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCc
Q 023864 236 RNLNELEFI--KGEVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 236 ~~lNELE~i--dG~lyANvw~s~d~I~vIDp~T~~ 268 (276)
..++-+.+. ||...+..-.. +.|.+-|.++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d-~~i~vwd~~~~~ 288 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKS-GAWLRWNLFANN 288 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTT-SEEEEEEC----
T ss_pred ccceeeeeecCCCCEEEEEeCC-CCEEEEECccCC
Confidence 122233343 56655555556 788888888754
No 323
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.95 E-value=0.083 Score=53.04 Aligned_cols=156 Identities=8% Similarity=0.007 Sum_probs=97.1
Q ss_pred EEEEecCCEEEEEcCCC--CCCeEEEEeCCCCcEEEEe-e-----cCCCceEEEEEEe--CCEEEEEEee------CCEE
Q 023864 109 GLLYAENDTLFESTGLY--GRSSVRRVALETGKVEAIN-Q-----MEGSYFGEGLTLL--GEKLFQVTWL------QKTG 172 (276)
Q Consensus 109 GL~~~~dg~LyeStG~y--g~S~I~~iDl~tgkv~~~~-~-----l~~~~FgEGit~~--g~~LyqlTwk------~~~v 172 (276)
|-...-++.||.-.|.. ..+.+.+||+.+++-.... + +|....+-+++.. +++||+.-=. -+.+
T Consensus 391 g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp CEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCC
T ss_pred eEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccE
Confidence 55543467899876632 2467999999999865544 3 5554555677888 9999998432 2578
Q ss_pred EEEeCCC--CcEEEEEecCCCCeeEEee-CCCEEEEECC---CceEEEEcCCCCcEEEEEEeeeCCEeeeeeeee-EEEC
Q 023864 173 FIYDQNN--LNKLEEFTHQMKDGWGLAT-DGKVLFGSDG---SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL-EFIK 245 (276)
Q Consensus 173 ~V~D~~t--lk~i~~~~~~~~EGWGLT~-Dg~~L~vSDG---S~~L~viDp~t~~vi~~I~V~~~g~pv~~lNEL-E~id 245 (276)
.+||+.+ .+.+...+.+ ..+-+.+. .++.||+--| ...++++|+++.+-...-..+. .|..+-.=- ...+
T Consensus 471 ~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~--~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 471 WIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE--FFQNSLVSAGLEFD 547 (695)
T ss_dssp EEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSG--GGGSCCBSCEEEEE
T ss_pred EEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCC--CCCcccceeEEEEe
Confidence 9999988 4455555554 45666666 3666777544 2289999999987543221111 111111101 1223
Q ss_pred ---CEEEEEeCC-------CCCeEEEEeCCCCc
Q 023864 246 ---GEVWANVWQ-------VWPCIPYAYLQAFG 268 (276)
Q Consensus 246 ---G~lyANvw~-------s~d~I~vIDp~T~~ 268 (276)
|+||+-=.. . +.+.+.|++++.
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~-~~v~~yd~~~~~ 579 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVS-DKAIIFKYDAEN 579 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBC-CEEEEEEECTTC
T ss_pred CCCCEEEEECCcCCCCCeee-CcEEEEEccCCc
Confidence 677754332 4 679999999876
No 324
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=95.92 E-value=0.063 Score=50.85 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=79.9
Q ss_pred CEEEEEEeeCC--EEEEEeCCCCcEEEEEecC--CCCeeE-----E-eeCCCEEEEEC-CCceEEEEcCCCCcEEEEEEe
Q 023864 160 EKLFQVTWLQK--TGFIYDQNNLNKLEEFTHQ--MKDGWG-----L-ATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIV 228 (276)
Q Consensus 160 ~~LyqlTwk~~--~v~V~D~~tlk~i~~~~~~--~~EGWG-----L-T~Dg~~L~vSD-GS~~L~viDp~t~~vi~~I~V 228 (276)
+-||-++-+.+ .+-+||.++++++++++++ +|.|.| + ..+.+.+|+++ .+..|+.+|.+ +++++++..
T Consensus 40 ~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~-G~~~~k~~~ 118 (369)
T 3s9j_A 40 EYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ-GEIIRNYNF 118 (369)
T ss_dssp EEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT-CCEEEEEEC
T ss_pred EEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCC-ceEEEEEec
Confidence 47888888888 9999999999999999975 455533 3 34667888876 88999999966 899999988
Q ss_pred eeCCEeeeee-------eeeEEECCEEEEE-----------eCCCCCeEEEEeCCCCcEE
Q 023864 229 RYKGREVRNL-------NELEFIKGEVWAN-----------VWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 229 ~~~g~pv~~l-------NELE~idG~lyAN-----------vw~s~d~I~vIDp~T~~v~ 270 (276)
...+..+... +-+-..|+.+|++ .|..+..++.||+.++++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~~~~ 178 (369)
T 3s9j_A 119 QTPEGRFTPLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTGEVK 178 (369)
T ss_dssp CCTTSCCCCCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTCCEE
T ss_pred CCCccccccccccccccCcceecCceEEEeccccccccchhhhccCceEEEEECCCCcEE
Confidence 7655322100 1122346777874 2344468999999998876
No 325
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.87 E-value=0.18 Score=50.68 Aligned_cols=157 Identities=12% Similarity=0.030 Sum_probs=97.9
Q ss_pred eEEEEec-CCEEEEEcCCCCC----CeEEEEeCCCCcEEEEeecCCCceEEEEEEe-CCEEEEEEeeCC--EEEEEeCCC
Q 023864 108 QGLLYAE-NDTLFESTGLYGR----SSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQK--TGFIYDQNN 179 (276)
Q Consensus 108 QGL~~~~-dg~LyeStG~yg~----S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~-g~~LyqlTwk~~--~v~V~D~~t 179 (276)
.+.+..+ +|+||+-.|..+. +.+.+||+.+.+-....++|...++-+.+.. +++||+.--.++ .+.+||+.+
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 3666664 6899997775432 5799999999887666677765566677775 999999954332 799999988
Q ss_pred CcEEEE-----EecCCCCeeE-EeeC--CCEEEEECC--------CceEEEEcCCCCcE-----EEEEEee-eCCEeeee
Q 023864 180 LNKLEE-----FTHQMKDGWG-LATD--GKVLFGSDG--------SSMLYQIDPQTLKV-----IRKDIVR-YKGREVRN 237 (276)
Q Consensus 180 lk~i~~-----~~~~~~EGWG-LT~D--g~~L~vSDG--------S~~L~viDp~t~~v-----i~~I~V~-~~g~pv~~ 237 (276)
.+-..- .+.+ ..+-+ +..+ .+.||+--| .+.++.+|+++.+- -..+.-. ..++.-+
T Consensus 523 ~~W~~~~~~g~~p~~-r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~- 600 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQN-SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS- 600 (695)
T ss_dssp TEEEECCCSSGGGGS-CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-
T ss_pred CceEEccCCCCCCCc-ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-
Confidence 654322 2223 23333 3323 267887654 36799999999872 1222211 1111111
Q ss_pred eeeeEEEC-CEEEEEeC--------CCCCeEEEEeCCCCcE
Q 023864 238 LNELEFIK-GEVWANVW--------QVWPCIPYAYLQAFGS 269 (276)
Q Consensus 238 lNELE~id-G~lyANvw--------~s~d~I~vIDp~T~~v 269 (276)
-+...+ |+||+-=. .. +.|.+.|+++++-
T Consensus 601 --~~~~~~~~~iyv~GG~~~~~~~~~~-~~v~~yd~~t~~W 638 (695)
T 2zwa_A 601 --QIKYITPRKLLIVGGTSPSGLFDRT-NSIISLDPLSETL 638 (695)
T ss_dssp --EEEEEETTEEEEECCBCSSCCCCTT-TSEEEEETTTTEE
T ss_pred --eEEEeCCCEEEEECCccCCCCCCCC-CeEEEEECCCCeE
Confidence 123445 88776322 25 7899999998653
No 326
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.81 E-value=0.18 Score=50.07 Aligned_cols=155 Identities=10% Similarity=-0.007 Sum_probs=90.4
Q ss_pred CCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEe-ecCCCceEEEEEEe-CCEEEEEEeeCCEEEEEeCCCC
Q 023864 103 PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNL 180 (276)
Q Consensus 103 ~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~-~l~~~~FgEGit~~-g~~LyqlTwk~~~v~V~D~~tl 180 (276)
+...+..+.-+.+|.||.+|. +-|.+||-.+-+..... .+... .-..|..+ ++.||+.|. +-++.||+.+.
T Consensus 20 ~~n~V~~I~qD~~G~lWigT~----~GL~ryDG~~~~~~~~~~~~~~~-~i~~i~~d~~g~lWigT~--~Gl~~yd~~~~ 92 (758)
T 3ott_A 20 EASVVSCFLQDSEGLIWIGSN----KGLFSYDGYSTQQHFTYGENNNT-RIYCGVIIDNTYLYMGTD--NGILVYNYRAD 92 (758)
T ss_dssp SCCCEEEEEECTTSCEEEEES----SCEEEECSSCEEECSCTTSTTSS-CEEEEEEETTTEEEEEET--TEEEEEETTTT
T ss_pred ccceEEEEEECCCCCEEEEEC----CCccccCCCceEEEEccCCCCCc-eEEEEEEcCCCcEEEEeC--CCeEEEeCCCC
Confidence 456678888888899999875 45888885432211110 12222 22344444 589999994 55899999875
Q ss_pred cEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeE
Q 023864 181 NKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQVWPCI 259 (276)
Q Consensus 181 k~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I 259 (276)
+...........=+.+..+++.||+.-.. -|+.+|+++.+... +.-...+.+-..++.|... +|.||+... +-|
T Consensus 93 ~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWigt~---~Gl 167 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS-FDTRRNGLPNNTIYSIIRTKDNQIYVGTY---NGL 167 (758)
T ss_dssp EECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE-ECHHHHCCSCSCEEEEEECTTCCEEEEET---TEE
T ss_pred EEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE-eccCCCCcCCCeEEEEEEcCCCCEEEEeC---CCH
Confidence 43220000001123344455678885433 79999998876543 2111122222344445444 789998763 569
Q ss_pred EEEeCCCCcE
Q 023864 260 PYAYLQAFGS 269 (276)
Q Consensus 260 ~vIDp~T~~v 269 (276)
.++|+++++.
T Consensus 168 ~~~~~~~~~~ 177 (758)
T 3ott_A 168 CRYIPSNGKF 177 (758)
T ss_dssp EEEETTTTEE
T ss_pred hhCccCCCce
Confidence 9999988553
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.56 E-value=0.092 Score=53.09 Aligned_cols=132 Identities=11% Similarity=0.103 Sum_probs=91.3
Q ss_pred CeEEEEeCCCCcEEEEeecCCCc----------eEE--------EEEE------eCCEEEEEEeeC-------------C
Q 023864 128 SSVRRVALETGKVEAINQMEGSY----------FGE--------GLTL------LGEKLFQVTWLQ-------------K 170 (276)
Q Consensus 128 S~I~~iDl~tgkv~~~~~l~~~~----------FgE--------Git~------~g~~LyqlTwk~-------------~ 170 (276)
+....+|.++.++.-++.++..+ ++- |.++ ..|.+.+.+|+. +
T Consensus 217 ~~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 217 TMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp EEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred eEEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 34556899999987777555221 110 1111 125777888842 2
Q ss_pred --EEEEEeCCC----C-cEEEEEecC-CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCCcE-------------EEEEEe
Q 023864 171 --TGFIYDQNN----L-NKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKV-------------IRKDIV 228 (276)
Q Consensus 171 --~v~V~D~~t----l-k~i~~~~~~-~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~~v-------------i~~I~V 228 (276)
.+-|+|... . +.+..+|.+ .|.|.-++|||+++++++ .+.+++++|-+.+.. ..++++
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 577899876 2 355667877 789999999999999999 699999999885322 556666
Q ss_pred eeCCEeeeeeeeeEEE-CCEEEEEeCCCCCeEEEEeCCC
Q 023864 229 RYKGREVRNLNELEFI-KGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 229 ~~~g~pv~~lNELE~i-dG~lyANvw~s~d~I~vIDp~T 266 (276)
+. .|.+ .+|. +|..|.+.+-+ ..|++-|.++
T Consensus 377 Gl--GPlH----t~Fd~~G~aYTtlfid-SqvvkWni~~ 408 (638)
T 3sbq_A 377 GL--GPLH----TTFDGRGNAYTTLFID-SQVVKWNMEE 408 (638)
T ss_dssp CS--CEEE----EEECSSSEEEEEETTT-TEEEEEEHHH
T ss_pred CC--cccE----EEECCCCceEeeeeec-ceEEEEeccH
Confidence 54 4444 4465 57999999999 9999965543
No 328
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=95.31 E-value=0.8 Score=43.21 Aligned_cols=148 Identities=9% Similarity=0.020 Sum_probs=91.2
Q ss_pred cCCEEEEEcCCCCCC--eEEEEeCCCCcEEEEeecCC-------CceEEEE-EEeCCEEEEEEeeCCEEEEEeCCCCcEE
Q 023864 114 ENDTLFESTGLYGRS--SVRRVALETGKVEAINQMEG-------SYFGEGL-TLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (276)
Q Consensus 114 ~dg~LyeStG~yg~S--~I~~iDl~tgkv~~~~~l~~-------~~FgEGi-t~~g~~LyqlTwk~~~v~V~D~~tlk~i 183 (276)
.+|+-|...=.+..+ .|.+||++++++++++++.. ++++ |+ ....|.+|+.++....++++|. .++++
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~-~~~i~~~DsI~i~~~~~~~i~l~n~-~G~~~ 113 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFG-SRPSPDSQYILVAQNNISRLSSINS-QGEII 113 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCC-EEESSSTTSEEEEEGGGTEEEEECT-TCCEE
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCccccee-eEEecCCCEEEEEeCCcceEEEECC-CceEE
Confidence 456533322223567 99999999999999997762 2222 23 3356999999999999999995 45788
Q ss_pred EEEecC-CCCeeEEe---e--------CCCEEEEE-CC------------CceEEEEcCCCCcEEEEEEe--ee-CCEee
Q 023864 184 EEFTHQ-MKDGWGLA---T--------DGKVLFGS-DG------------SSMLYQIDPQTLKVIRKDIV--RY-KGREV 235 (276)
Q Consensus 184 ~~~~~~-~~EGWGLT---~--------Dg~~L~vS-DG------------S~~L~viDp~t~~vi~~I~V--~~-~g~pv 235 (276)
.++.+. .+.++... . ++..|+++ +. ...+..+|+++.++. .+.+ .+ .+...
T Consensus 114 ~k~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~~~~-~l~l~yP~~~~~~~ 192 (369)
T 3s9j_A 114 RNYNFQTPEGRFTPLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTGEVK-WIPIFYPPIFKEEY 192 (369)
T ss_dssp EEEECCCTTSCCCCCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTCCEE-EEEEECCSCCCCCC
T ss_pred EEEecCCCccccccccccccccCcceecCceEEEeccccccccchhhhccCceEEEEECCCCcEE-EeeccCCccccccc
Confidence 888765 22333200 1 12335553 21 236888999988775 3333 11 11000
Q ss_pred e---eeeeeE--E--ECCEEEEEeCCCCCeEEEEeCCC
Q 023864 236 R---NLNELE--F--IKGEVWANVWQVWPCIPYAYLQA 266 (276)
Q Consensus 236 ~---~lNELE--~--idG~lyANvw~s~d~I~vIDp~T 266 (276)
. .-.+.+ + .+|+++.+-+.+ +.|.+.| .+
T Consensus 193 ~~~~~~~~~~~s~~~~~~~~Iis~~~~-dsIyv~~-~~ 228 (369)
T 3s9j_A 193 DNIAGGYGFSYDYNYKESRLVCGFFGY-DSLMVTD-DL 228 (369)
T ss_dssp SSEEECCCEEEEEETTTTEEEEEETTC-SEEEEES-SS
T ss_pred ccccCCccceeEEEEECCEEEEEeccC-CeEEEEc-Cc
Confidence 0 001222 1 278999999999 9999888 55
No 329
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.21 E-value=0.2 Score=50.45 Aligned_cols=162 Identities=12% Similarity=0.070 Sum_probs=88.8
Q ss_pred CCceEEEEecCCE-EEEEcCCCCCCeEEEEeCCCC--cE--EEEee-cCCCceEEEEE-EeCCEEEEEEeeC----CEEE
Q 023864 105 AFTQGLLYAENDT-LFESTGLYGRSSVRRVALETG--KV--EAINQ-MEGSYFGEGLT-LLGEKLFQVTWLQ----KTGF 173 (276)
Q Consensus 105 aFTQGL~~~~dg~-LyeStG~yg~S~I~~iDl~tg--kv--~~~~~-l~~~~FgEGit-~~g~~LyqlTwk~----~~v~ 173 (276)
.|.-++.+++||+ |+.+....+.+.|..+|++++ +. ..-.+ -....|. .. ..|++||.++.++ .+++
T Consensus 271 ~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s--~~~~~g~~l~~~t~~~~a~~~~L~ 348 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD--VQMHGTSHLVILTNEGGAVNHKLL 348 (751)
T ss_dssp TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE--EEEETTTEEEEEECTTTCTTCEEE
T ss_pred ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE--EeeeeCCEEEEEeCCCCCCCcEEE
Confidence 4656889999985 555444446889999999986 22 21111 1112231 22 2389999999875 4899
Q ss_pred EEeCCCCcEEEE--EecCCCCe---eEEeeCCCEEEEE---CCCceEEEEcC-------CCCcEEEEEEeeeCCEeeee-
Q 023864 174 IYDQNNLNKLEE--FTHQMKDG---WGLATDGKVLFGS---DGSSMLYQIDP-------QTLKVIRKDIVRYKGREVRN- 237 (276)
Q Consensus 174 V~D~~tlk~i~~--~~~~~~EG---WGLT~Dg~~L~vS---DGS~~L~viDp-------~t~~vi~~I~V~~~g~pv~~- 237 (276)
++|.++.....+ ++.. +. -+++.+++.|+++ ||..+|+++|+ ++.+..+.|.....+..+..
T Consensus 349 ~~d~~~~~~~~~~li~~~--~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~ 426 (751)
T 2xe4_A 349 IAPRGQPSDWSHVLVDHS--EDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLV 426 (751)
T ss_dssp EEETTSTTCCCCEEECCC--SSEEEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEEC
T ss_pred EEcCCCcccceeeEECCC--CCcEEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEec
Confidence 999875322122 3221 22 2355667777663 58889999997 44441344443332221110
Q ss_pred eeee-EEECCEEE--EEeCCCCCeEEEEeCCCCcEE
Q 023864 238 LNEL-EFIKGEVW--ANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 238 lNEL-E~idG~ly--ANvw~s~d~I~vIDp~T~~v~ 270 (276)
.|-+ ++.+++++ .+...+-..|..+|.++++..
T Consensus 427 ~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 462 (751)
T 2xe4_A 427 ESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT 462 (751)
T ss_dssp GGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred cCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 0100 12233333 233333146888888887643
No 330
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=94.98 E-value=1.2 Score=41.96 Aligned_cols=142 Identities=11% Similarity=0.081 Sum_probs=87.0
Q ss_pred ceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCc-----------EEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEE
Q 023864 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGK-----------VEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIY 175 (276)
Q Consensus 107 TQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgk-----------v~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~ 175 (276)
..-|++++++.|+.++| .+.+.+++++..+ ....++++. +..-++ +++.|++. .++.+.+|
T Consensus 40 ~nlLais~~~gll~a~~---~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~--~~~~l~v~ 111 (388)
T 1xip_A 40 LQNLDISNSKSLFVAAS---GSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS--TRNALYSL 111 (388)
T ss_dssp CBCEEEETTTTEEEEEE---TTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE--ESSEEEEE
T ss_pred ccEEEEcCCCCEEEEeC---CCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE--cCCcEEEE
Confidence 46889998766555444 3688888865433 123457887 776666 88899988 78999999
Q ss_pred eCCCCcEEEEEecCCCCee-EEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEECCEEEEEeCC
Q 023864 176 DQNNLNKLEEFTHQMKDGW-GLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQ 254 (276)
Q Consensus 176 D~~tlk~i~~~~~~~~EGW-GLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~idG~lyANvw~ 254 (276)
|..++......+.- ..+. .+-+-...+.+...+..|+++|.++.+... ... ...-..|....+.+ ...
T Consensus 112 dv~sl~~~~~~~~~-~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~---~~~------~Vs~v~WSpkG~~v-g~~ 180 (388)
T 1xip_A 112 DLEELSEFRTVTSF-EKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ---LAQ------NVTSFDVTNSQLAV-LLK 180 (388)
T ss_dssp ESSSTTCEEEEEEC-SSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE---EEE------SEEEEEECSSEEEE-EET
T ss_pred EchhhhccCcccee-ecceeeEEecCCCEEEEECCCCEEEEEccCCcccc---ccC------CceEEEEcCCceEE-EEc
Confidence 99998866555321 1221 122222236665667899999999887643 211 22223344322332 224
Q ss_pred CCCeEEEEeCCCCc
Q 023864 255 VWPCIPYAYLQAFG 268 (276)
Q Consensus 255 s~d~I~vIDp~T~~ 268 (276)
. +.|...+|.+++
T Consensus 181 d-g~i~~~~~~~~~ 193 (388)
T 1xip_A 181 D-RSFQSFAWRNGE 193 (388)
T ss_dssp T-SCEEEEEEETTE
T ss_pred C-CcEEEEcCCCcc
Confidence 4 677777777754
No 331
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.95 E-value=0.22 Score=43.46 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=59.3
Q ss_pred EEEEEcCCCCCCeEEEEeCCCCc-EEEEeecCC-CceEEEEEEeCC-----EEEEEEeeCCEEEEEeCCCC-------cE
Q 023864 117 TLFESTGLYGRSSVRRVALETGK-VEAINQMEG-SYFGEGLTLLGE-----KLFQVTWLQKTGFIYDQNNL-------NK 182 (276)
Q Consensus 117 ~LyeStG~yg~S~I~~iDl~tgk-v~~~~~l~~-~~FgEGit~~g~-----~LyqlTwk~~~v~V~D~~tl-------k~ 182 (276)
.++.+++ .+..|+.||+++++ ......+.. .-.-..+++..+ .+.+..=.++++.++|..+. +.
T Consensus 180 ~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~ 257 (316)
T 3bg1_A 180 KRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL 257 (316)
T ss_dssp CBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE
T ss_pred ceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh
Confidence 5666655 67889999997652 212222332 223345555432 55666667899999998763 22
Q ss_pred EEEEecCCCCeeE--EeeCCCEEEEECCCceEEEEcCC
Q 023864 183 LEEFTHQMKDGWG--LATDGKVLFGSDGSSMLYQIDPQ 218 (276)
Q Consensus 183 i~~~~~~~~EGWG--LT~Dg~~L~vSDGS~~L~viDp~ 218 (276)
+..+ . ..=|. +.+||+.|..+.....|.++|..
T Consensus 258 ~~~~--~-~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 258 LHKF--N-DVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEC--S-SCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred hhcC--C-CcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 3222 2 23334 56899988876667788888865
No 332
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=94.95 E-value=0.068 Score=52.97 Aligned_cols=110 Identities=14% Similarity=0.105 Sum_probs=68.9
Q ss_pred eEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceE---EEEEE--eCCEEEEEEee--------CCEEE
Q 023864 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFG---EGLTL--LGEKLFQVTWL--------QKTGF 173 (276)
Q Consensus 108 QGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~Fg---EGit~--~g~~LyqlTwk--------~~~v~ 173 (276)
..+.|++||+++.+. +..|..||+++|+......-.. ..+. ..+++ ++++|...... .+.++
T Consensus 20 ~~~~w~~dg~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ----ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCEEECSSSEEEEEE----TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccEECCCCcEEEEc----CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 488999999877664 4689999999998654432221 1111 12333 45565554432 15678
Q ss_pred EEeCCCCcEEEEEecCC-CCeeEEeeCCCEE-EEECCCceEEEEcCCCCcEE
Q 023864 174 IYDQNNLNKLEEFTHQM-KDGWGLATDGKVL-FGSDGSSMLYQIDPQTLKVI 223 (276)
Q Consensus 174 V~D~~tlk~i~~~~~~~-~EGWGLT~Dg~~L-~vSDGS~~L~viDp~t~~vi 223 (276)
++|.++.+...-...+. -..-.++|||+.| |++| +.|+++|.++.+..
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN--NDIYVKIEPNLPSY 145 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET--TEEEEESSTTSCCE
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC--CeEEEEECCCCceE
Confidence 99999887543111110 1222478999876 5565 68999999988754
No 333
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.60 E-value=0.13 Score=51.81 Aligned_cols=152 Identities=11% Similarity=-0.066 Sum_probs=82.0
Q ss_pred eEEEEe-cCCE-EEEEcCCCCC--CeEEEEeCCCC-cEEEEeecCCCceEEEEEE--eCCEEEEEEeeC----CEEEEEe
Q 023864 108 QGLLYA-ENDT-LFESTGLYGR--SSVRRVALETG-KVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQ----KTGFIYD 176 (276)
Q Consensus 108 QGL~~~-~dg~-LyeStG~yg~--S~I~~iDl~tg-kv~~~~~l~~~~FgEGit~--~g~~LyqlTwk~----~~v~V~D 176 (276)
-+..|+ |||+ |..+...-|. ..|+++|+++| +.+.. .++.. + .++++ +++.||.....+ .++++++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~-~-~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGT-N-GEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEE-C-SCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCc-e-eeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 457899 9985 3322222243 45999999999 73211 11111 1 13445 345777776542 4799999
Q ss_pred CCCCcEE--EEEecCC-C--CeeEEeeCCCEEEEEC---CCceEEEEcCCCCc-EE--EEEEeeeCCEeeeeeeeeEEE-
Q 023864 177 QNNLNKL--EEFTHQM-K--DGWGLATDGKVLFGSD---GSSMLYQIDPQTLK-VI--RKDIVRYKGREVRNLNELEFI- 244 (276)
Q Consensus 177 ~~tlk~i--~~~~~~~-~--EGWGLT~Dg~~L~vSD---GS~~L~viDp~t~~-vi--~~I~V~~~g~pv~~lNELE~i- 244 (276)
..+.+.. ..+..+. . .+..+++||++|+++- +.+.|+++|+++.+ .. +.+ +.....+... .++.
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l-~~~~~~~~~s---~~~~~ 329 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIV-RPREKGVRYD---VQMHG 329 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEES-SCCCTTCCEE---EEEET
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEe-ecCCCCceEE---Eeeee
Confidence 8876422 2222110 1 1234789999887633 47899999998752 11 222 1111112111 1222
Q ss_pred CCEEE-EEeCC--CCCeEEEEeCCC
Q 023864 245 KGEVW-ANVWQ--VWPCIPYAYLQA 266 (276)
Q Consensus 245 dG~ly-ANvw~--s~d~I~vIDp~T 266 (276)
+++|| ..+.. .+..|.++|.++
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 44544 55442 215899999875
No 334
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.59 E-value=0.45 Score=46.71 Aligned_cols=125 Identities=12% Similarity=0.089 Sum_probs=78.7
Q ss_pred EEEEEEecCCCCCceEEEEec-CCEEEEEcCCCC---------CCeEEEEeCCCCcEEEEeec--CCCceEEEEEE-eCC
Q 023864 94 QVVNEFPHDPRAFTQGLLYAE-NDTLFESTGLYG---------RSSVRRVALETGKVEAINQM--EGSYFGEGLTL-LGE 160 (276)
Q Consensus 94 ~Vv~~~Phd~~aFTQGL~~~~-dg~LyeStG~yg---------~S~I~~iDl~tgkv~~~~~l--~~~~FgEGit~-~g~ 160 (276)
+.+..+|. ..+ +..+.+ +|+||...|... .+.+.+||+.+++......+ +...|+-+.++ .++
T Consensus 179 ~~~~~~P~--~~~--~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g 254 (656)
T 1k3i_A 179 GPTIDLPI--VPA--AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG 254 (656)
T ss_dssp EEEEECSS--CCS--EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS
T ss_pred eeeccCCC--Cce--eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC
Confidence 34444554 333 667776 799998776322 23789999999875443333 34567766665 578
Q ss_pred EEEEEEe-eCCEEEEEeCCCCcEE--EEEecCCCCeeEEe-e-CCCEEEEECC-------CceEEEEcCCCCcEEE
Q 023864 161 KLFQVTW-LQKTGFIYDQNNLNKL--EEFTHQMKDGWGLA-T-DGKVLFGSDG-------SSMLYQIDPQTLKVIR 224 (276)
Q Consensus 161 ~LyqlTw-k~~~v~V~D~~tlk~i--~~~~~~~~EGWGLT-~-Dg~~L~vSDG-------S~~L~viDp~t~~vi~ 224 (276)
+||++-= .++.+.+||+.+.+-. ...+.+ ..+-+.+ . ||+ +|+-=| .+.+.++||++.+-..
T Consensus 255 ~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 255 QIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp CEEEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred CEEEeCCCCCCceEEecCcCCceeECCCCCcc-ccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCccee
Confidence 9999865 4568999998876533 333333 2333433 3 565 555444 2689999999987543
No 335
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.31 E-value=0.85 Score=43.93 Aligned_cols=45 Identities=22% Similarity=0.222 Sum_probs=32.3
Q ss_pred eEEEEEEe-cCCCCCceEEEEecCCEEEEEcCCCCC---------------CeEEEEeCCC
Q 023864 93 IQVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGR---------------SSVRRVALET 137 (276)
Q Consensus 93 ~~Vv~~~P-hd~~aFTQGL~~~~dg~LyeStG~yg~---------------S~I~~iDl~t 137 (276)
.++|-++| ....-+.-.|.|.|||.||.++|.-+. .+|.++|++.
T Consensus 126 ~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 126 ARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDT 186 (463)
T ss_dssp CEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCC
T ss_pred ceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCC
Confidence 44554565 334567888999999999999997542 3577777765
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.82 E-value=0.18 Score=47.13 Aligned_cols=111 Identities=9% Similarity=0.064 Sum_probs=75.4
Q ss_pred CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecC--CCceEE--EEEEeCCEEEEEE-eeCCEEEEEeCCCCcEEEEEecC-
Q 023864 116 DTLFESTGLYGRSSVRRVALETGKVEAINQME--GSYFGE--GLTLLGEKLFQVT-WLQKTGFIYDQNNLNKLEEFTHQ- 189 (276)
Q Consensus 116 g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~--~~~FgE--Git~~g~~LyqlT-wk~~~v~V~D~~tlk~i~~~~~~- 189 (276)
|.+|++|. +..|+.+|.++|+++=+.+.+ ..+... +....++.+|++. -.++.++.+|+++....-.+..+
T Consensus 11 ~~V~v~t~---dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADV---EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEET---TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeC---CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 57787655 578999999999988777665 122210 0001245788887 58999999999988766666543
Q ss_pred --CCCeeEEe-----------eCCCEEEEECCCceEEEEcCCCCcEEEEEEee
Q 023864 190 --MKDGWGLA-----------TDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 190 --~~EGWGLT-----------~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~ 229 (276)
..-..-.+ .++..+|+.....+|+.+|++|++++-+..++
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 00001111 15667888777889999999999999887765
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.67 E-value=0.73 Score=42.94 Aligned_cols=109 Identities=7% Similarity=-0.012 Sum_probs=67.4
Q ss_pred CCEEEEEEeeCCEEEEEeCCCCcEEEEEecC-CCCeeEEe----eCCCEEEEEC--CCceEEEEcCCCCcEEEEEEeee-
Q 023864 159 GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLA----TDGKVLFGSD--GSSMLYQIDPQTLKVIRKDIVRY- 230 (276)
Q Consensus 159 g~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~-~~EGWGLT----~Dg~~L~vSD--GS~~L~viDp~t~~vi~~I~V~~- 230 (276)
++.+|+.| .++.++.+|.+|.+++-+++.. ...-.+.. +++..+|+-+ ++.+|+.+|++++..+-.+.+..
T Consensus 10 ~~~V~v~t-~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAAD-VEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEE-TTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEe-CCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 35666666 4788899999999999999753 00111111 1233555544 68899999999986654444431
Q ss_pred -CCEeeee-----eeeeE--EECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 023864 231 -KGREVRN-----LNELE--FIKGEVWANVWQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 231 -~g~pv~~-----lNELE--~idG~lyANvw~s~d~I~vIDp~T~~v~ 270 (276)
+..|+.. ++|++ -.+|.||+.-+ . ..+..||++||++.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~-~-g~l~ald~~tG~~~ 134 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM-R-TIMYTINMLNGEII 134 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEE-E-EEEEEEETTTCCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEec-C-CEEEEEECCCCcEE
Confidence 2222221 11110 04778998875 4 68999999998865
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.92 E-value=0.23 Score=50.29 Aligned_cols=101 Identities=12% Similarity=-0.011 Sum_probs=76.0
Q ss_pred eEEEEeCCC----C-cEEEEeecCCCceEEEEEEeCCEEEEEEeeCCEEEEEeCCCCcE-------------EEEEecC-
Q 023864 129 SVRRVALET----G-KVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNK-------------LEEFTHQ- 189 (276)
Q Consensus 129 ~I~~iDl~t----g-kv~~~~~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D~~tlk~-------------i~~~~~~- 189 (276)
.|.++|... + ++++-+++|+.|-|.-++.+|..+++..-.+.++.|||.+.+.. .++.+.+
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 577788766 2 56778899999888888888999999999999999999886532 3333332
Q ss_pred CCCeeEEeeCCCEEEEEC-CCceEEEEcCCCC----------cEEEEEEeee
Q 023864 190 MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTL----------KVIRKDIVRY 230 (276)
Q Consensus 190 ~~EGWGLT~Dg~~L~vSD-GS~~L~viDp~t~----------~vi~~I~V~~ 230 (276)
.|-.-+++.+| ..|.|- =+++|..+|.++. .++.++.|..
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccccc
Confidence 22233355566 899998 4899999887664 6899999986
No 339
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=88.82 E-value=13 Score=34.78 Aligned_cols=116 Identities=10% Similarity=-0.001 Sum_probs=71.1
Q ss_pred EEecCCCCCceEEEEecCCEEEEEcCCCCCCeEEEEeCCCCcEEEEe-ecCCCceEEEEEEeCCEEEEEEeeCCEEEEEe
Q 023864 98 EFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 98 ~~Phd~~aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~tgkv~~~~-~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D 176 (276)
.+++. . ...|.| .+..|+.+ .++.|++||..+....... .+....+ .+-..+..+.++ -.++.++++|
T Consensus 84 ~~~lp-~--V~~l~f-d~~~L~v~----~~~~l~v~dv~sl~~~~~~~~~~~~v~--~i~~~~p~~av~-~~dG~L~v~d 152 (388)
T 1xip_A 84 EKEIP-D--VIFVCF-HGDQVLVS----TRNALYSLDLEELSEFRTVTSFEKPVF--QLKNVNNTLVIL-NSVNDLSALD 152 (388)
T ss_dssp EEECT-T--EEEEEE-ETTEEEEE----ESSEEEEEESSSTTCEEEEEECSSCEE--EEEECSSEEEEE-ETTSEEEEEE
T ss_pred EeeCC-C--eeEEEE-CCCEEEEE----cCCcEEEEEchhhhccCccceeeccee--eEEecCCCEEEE-ECCCCEEEEE
Confidence 44663 3 678999 44678876 3368999998765432222 2233333 444455555555 4679999999
Q ss_pred CCCCcEEEEEecCCCCeeEEeeCCCEEEEECCCceEEEEcCCCCcE--EEEEEe
Q 023864 177 QNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV--IRKDIV 228 (276)
Q Consensus 177 ~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~v--i~~I~V 228 (276)
.++.+... ..-. --....+++| +.+.-+.+++.+++|++.++ +++|..
T Consensus 153 l~~~~~~~-~~~~-Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~ 202 (388)
T 1xip_A 153 LRTKSTKQ-LAQN-VTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSL 202 (388)
T ss_dssp TTTCCEEE-EEES-EEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred ccCCcccc-ccCC-ceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecC
Confidence 98777643 2211 1223345677 55555667788889998887 666633
No 340
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=81.62 E-value=19 Score=36.07 Aligned_cols=96 Identities=21% Similarity=0.135 Sum_probs=60.9
Q ss_pred CEEEEEeCCC---CcEEEEEe---cC-CCCeeE---Ee--eCCCE-EEEECC------CceEEEEcCCCCcEEEEEEeee
Q 023864 170 KTGFIYDQNN---LNKLEEFT---HQ-MKDGWG---LA--TDGKV-LFGSDG------SSMLYQIDPQTLKVIRKDIVRY 230 (276)
Q Consensus 170 ~~v~V~D~~t---lk~i~~~~---~~-~~EGWG---LT--~Dg~~-L~vSDG------S~~L~viDp~t~~vi~~I~V~~ 230 (276)
+-+|.+|..+ -+++-+|. .+ +++-|+ ++ .+|++ +++.+| ...|+++|++|++++++|.+..
T Consensus 164 ~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~~~ 243 (570)
T 3hx6_A 164 KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTG 243 (570)
T ss_dssp SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEECC
T ss_pred cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEecCC
Confidence 3566677544 66777776 22 344444 23 36675 566776 5699999999999999998863
Q ss_pred CCEeeeeeeeeEEEC-------CEEEEEeCCCCCeEEEEeCCCC
Q 023864 231 KGREVRNLNELEFIK-------GEVWANVWQVWPCIPYAYLQAF 267 (276)
Q Consensus 231 ~g~pv~~lNELE~id-------G~lyANvw~s~d~I~vIDp~T~ 267 (276)
......-|-....+| +.+||.- .. ..|.++|..+.
T Consensus 244 ~~~~~~Gls~~~~~D~d~Dg~~D~~YaGD-l~-GnlWRfDl~~~ 285 (570)
T 3hx6_A 244 RTGVPNGLSSPRLADNNSDGVADYAYAGD-LQ-GNLWRFDLIAG 285 (570)
T ss_dssp STTSCCCEEEEEEECTTSSSBCCEEEEEE-TT-SEEEEEECSCS
T ss_pred CCccCCccccceEEecCCCCceeEEEEEe-CC-CcEEEEEcCCC
Confidence 111111223333342 3699987 45 78999998764
No 341
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.55 E-value=15 Score=37.20 Aligned_cols=151 Identities=16% Similarity=0.067 Sum_probs=80.7
Q ss_pred eEEE-EecCCE--EE-EEcCCCCCCeEEEEeCCCCcEEEEeecCCCceE-------EEEEEe-CCEEEEEEe--------
Q 023864 108 QGLL-YAENDT--LF-ESTGLYGRSSVRRVALETGKVEAINQMEGSYFG-------EGLTLL-GEKLFQVTW-------- 167 (276)
Q Consensus 108 QGL~-~~~dg~--Ly-eStG~yg~S~I~~iDl~tgkv~~~~~l~~~~Fg-------EGit~~-g~~LyqlTw-------- 167 (276)
.|+. +++|++ || .|.|.-....|+++|++|++.+...-.|..-+| -+++.. ++.+|..+.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 7887 888864 33 577744567799999999997532111111010 233443 567776542
Q ss_pred --eCCEEEEEeCCCCcEEEE--EecC-CCCe--eEEeeCCC----EEEEE---CC-CceEEEEcCCC--CcEEEEEEeee
Q 023864 168 --LQKTGFIYDQNNLNKLEE--FTHQ-MKDG--WGLATDGK----VLFGS---DG-SSMLYQIDPQT--LKVIRKDIVRY 230 (276)
Q Consensus 168 --k~~~v~V~D~~tlk~i~~--~~~~-~~EG--WGLT~Dg~----~L~vS---DG-S~~L~viDp~t--~~vi~~I~V~~ 230 (276)
...+++..-..|-..-.+ |.-+ .... -+.+.|++ .++++ |. .+.++++|+++ .+ ..++.+..
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 224555554443321111 1111 0112 23566777 35665 32 57899998764 33 23343333
Q ss_pred CCEeeeeeeeeEEECCEEEEE---eC-------CCCCeEEEEeCCC
Q 023864 231 KGREVRNLNELEFIKGEVWAN---VW-------QVWPCIPYAYLQA 266 (276)
Q Consensus 231 ~g~pv~~lNELE~idG~lyAN---vw-------~s~d~I~vIDp~T 266 (276)
+... .++.+|.+|+- .| .. ..|+++|.++
T Consensus 291 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 329 (711)
T 4hvt_A 291 DATL------QGSFKEYVFWLLRSDWKFKSHNIKA-GSLVALHFTD 329 (711)
T ss_dssp TCEE------EEEETTEEEEECSSCEEETTEEECT-TCEEEEEGGG
T ss_pred cceE------eeeECCEEEEEECcccccccccCCC-CeEEEEECCc
Confidence 2221 34668888873 22 45 6799998765
No 342
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=79.21 E-value=11 Score=37.67 Aligned_cols=59 Identities=25% Similarity=0.434 Sum_probs=40.3
Q ss_pred CCCeeEEeeCCCEEEEECCC------------ceEEEEcCCCCcEEEEEEeeeCCEeeeeeeeeEEE-CC-EEEEEe
Q 023864 190 MKDGWGLATDGKVLFGSDGS------------SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANV 252 (276)
Q Consensus 190 ~~EGWGLT~Dg~~L~vSDGS------------~~L~viDp~t~~vi~~I~V~~~g~pv~~lNELE~i-dG-~lyANv 252 (276)
.|++..++++|..++..||+ +.+.+.+|.+.++.+ +-++..|.++.-+ .+. || .||+||
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r-f~~~P~gaE~TG~---~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR-FMVGPIGCEVTGI---SFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEE-EEECCTTCEEEEE---EECTTSSEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEE-EEeCCCCccCcCe---eECCCCCEEEEEE
Confidence 35777888888866668864 578999999998754 4444445544433 243 44 699998
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=79.15 E-value=5.3 Score=38.35 Aligned_cols=95 Identities=17% Similarity=0.184 Sum_probs=53.8
Q ss_pred EEEEecCC--EEEEEcCCCCCCeEEEEeCCCCcEE-EEeecC------------CCceEEEEEEeC-----CEEEEEEee
Q 023864 109 GLLYAEND--TLFESTGLYGRSSVRRVALETGKVE-AINQME------------GSYFGEGLTLLG-----EKLFQVTWL 168 (276)
Q Consensus 109 GL~~~~dg--~LyeStG~yg~S~I~~iDl~tgkv~-~~~~l~------------~~~FgEGit~~g-----~~LyqlTwk 168 (276)
+|+|.||| +||++.= ...|++++.+..... ....++ ..++ ||+++. +.||+.--.
T Consensus 18 ~~a~~pdG~~rl~V~er---~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll--gia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 18 GALHSGDGSQRLFILEK---EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL--SLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp EEECCSSSSCCEEEEET---TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE--EEEECTTHHHHCEEEEEEEE
T ss_pred EEEECCCCCeEEEEEeC---CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce--eeEeCCCCcCCCEEEEEEeC
Confidence 99999997 4887532 347999986533110 001122 1233 688885 489987543
Q ss_pred C------------CEEEEEeCC----------CCcEEEEEecCCCCeeE----EeeCCCEEEEECCC
Q 023864 169 Q------------KTGFIYDQN----------NLNKLEEFTHQMKDGWG----LATDGKVLFGSDGS 209 (276)
Q Consensus 169 ~------------~~v~V~D~~----------tlk~i~~~~~~~~EGWG----LT~Dg~~L~vSDGS 209 (276)
. .++..+... +.++|-+++.+...++| +.+|| .||++-|+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG-~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDG-FLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTS-CEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCC-cEEEEeCC
Confidence 2 245444432 23455566543334554 56787 79997653
No 344
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.66 E-value=16 Score=36.75 Aligned_cols=65 Identities=15% Similarity=0.114 Sum_probs=46.3
Q ss_pred CCceEEEEecCCEEEEE-cCCC---------CCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--CEEEEEEeeC
Q 023864 105 AFTQGLLYAENDTLFES-TGLY---------GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQ 169 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeS-tG~y---------g~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~~LyqlTwk~ 169 (276)
...-+|.|+++|.||.+ .+.| +.+.|.++|+++|++.+-...|..--.-|+++.. ..||+.-..-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 44579999999999984 4433 4568999999999987766545433456777764 5888876543
No 345
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=69.59 E-value=25 Score=31.38 Aligned_cols=67 Identities=12% Similarity=0.042 Sum_probs=44.4
Q ss_pred CCceEEEEecCCEEEEEcCCCCCCeEEEEeCCC-------CcEEEEe-ecCCCceEEEEEEeCCEEEEEEeeCCEEEEEe
Q 023864 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALET-------GKVEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYD 176 (276)
Q Consensus 105 aFTQGL~~~~dg~LyeStG~yg~S~I~~iDl~t-------gkv~~~~-~l~~~~FgEGit~~g~~LyqlTwk~~~v~V~D 176 (276)
.| .-|+|+|||.||.. .+..|.++++.+ +. ..++ ..+-+.|+.-.---++.||.+ .+++++.+|
T Consensus 42 ~~-~~laf~P~G~LYaV----~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NF-KFLFLSPGGELYGV----LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TC-SEEEECTTSCEEEE----ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cc-eeEEECCCccEEEE----eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 55 48999999999974 334699999877 32 1221 123334644333336899999 579999999
Q ss_pred CCC
Q 023864 177 QNN 179 (276)
Q Consensus 177 ~~t 179 (276)
+-+
T Consensus 114 pP~ 116 (236)
T 1tl2_A 114 PPQ 116 (236)
T ss_dssp CCC
T ss_pred CCc
Confidence 743
No 346
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=49.80 E-value=1.9e+02 Score=29.09 Aligned_cols=110 Identities=6% Similarity=-0.035 Sum_probs=66.7
Q ss_pred EEEEecCCEEEEEcCC--------CCCCeEEEEeCCCCc--------EEEEeecCCCceEEEEEEeCCEEEEEEeeCC--
Q 023864 109 GLLYAENDTLFESTGL--------YGRSSVRRVALETGK--------VEAINQMEGSYFGEGLTLLGEKLFQVTWLQK-- 170 (276)
Q Consensus 109 GL~~~~dg~LyeStG~--------yg~S~I~~iDl~tgk--------v~~~~~l~~~~FgEGit~~g~~LyqlTwk~~-- 170 (276)
++....+++||..+.. +...+|..+|++++. ...-+.-.....-+++++.+++|+...-.++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 372 (711)
T 4hvt_A 293 TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVA 372 (711)
T ss_dssp EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEE
T ss_pred eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEE
Confidence 4433346888875532 356789999987642 1111222235567899999999988777775
Q ss_pred EEEEEeCCCCc-EEEE-EecCC-CCee--EEeeCCCEEEE--EC--CCceEEEEcCC
Q 023864 171 TGFIYDQNNLN-KLEE-FTHQM-KDGW--GLATDGKVLFG--SD--GSSMLYQIDPQ 218 (276)
Q Consensus 171 ~v~V~D~~tlk-~i~~-~~~~~-~EGW--GLT~Dg~~L~v--SD--GS~~L~viDp~ 218 (276)
.++++|+.+.+ .+.+ ++.+. +.-. +...|++.+++ ++ --..++.+|.+
T Consensus 373 ~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 373 KVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 47888876654 2344 55541 1111 23356766554 33 36689999987
No 347
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A
Probab=49.06 E-value=39 Score=32.95 Aligned_cols=14 Identities=7% Similarity=0.131 Sum_probs=10.2
Q ss_pred CeEEEEeCCCCcEE
Q 023864 128 SSVRRVALETGKVE 141 (276)
Q Consensus 128 S~I~~iDl~tgkv~ 141 (276)
+.|.++|++||+..
T Consensus 445 ~~l~K~D~~tg~~~ 458 (533)
T 3kvc_A 445 DRLCKLNVKTKETW 458 (533)
T ss_dssp EEEEEEETTTCCEE
T ss_pred ceeEEEEcCCCCEE
Confidence 45888888888753
No 348
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=48.97 E-value=2.2e+02 Score=28.57 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=66.7
Q ss_pred CCCeEEEEeCCCCcEEEEeecCCCceE----EEEEEe---C---CEEEEEEe------------------eCC-------
Q 023864 126 GRSSVRRVALETGKVEAINQMEGSYFG----EGLTLL---G---EKLFQVTW------------------LQK------- 170 (276)
Q Consensus 126 g~S~I~~iDl~tgkv~~~~~l~~~~Fg----EGit~~---g---~~LyqlTw------------------k~~------- 170 (276)
|.+.|..|+++ |+.+-++.++.+..+ ..+.+. + .++++.|- ++.
T Consensus 149 g~~~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~G 227 (591)
T 2zux_A 149 GDVLIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSG 227 (591)
T ss_dssp CCCEEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSS
T ss_pred CCcEEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecC
Confidence 35678899996 777778877643210 123332 2 48888864 333
Q ss_pred --EEEEEeCCCCcEEEEEecCCC----CeeE-------------Eee-CCC--EEEEECC---CceEEEEcCCCCcEEEE
Q 023864 171 --TGFIYDQNNLNKLEEFTHQMK----DGWG-------------LAT-DGK--VLFGSDG---SSMLYQIDPQTLKVIRK 225 (276)
Q Consensus 171 --~v~V~D~~tlk~i~~~~~~~~----EGWG-------------LT~-Dg~--~L~vSDG---S~~L~viDp~t~~vi~~ 225 (276)
-++|+|-.|.+.+.++++.-+ .+|| ++. ||+ .+++..| -..|..+|-++.++..+
T Consensus 228 pEyL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~ 307 (591)
T 2zux_A 228 PEYLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKL 307 (591)
T ss_dssp CCEEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEE
T ss_pred CcEEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEE
Confidence 489999999999999998411 2233 333 554 6777775 33577888777777666
Q ss_pred EEee
Q 023864 226 DIVR 229 (276)
Q Consensus 226 I~V~ 229 (276)
....
T Consensus 308 W~~d 311 (591)
T 2zux_A 308 WTLD 311 (591)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6554
No 349
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=48.25 E-value=40 Score=33.87 Aligned_cols=57 Identities=18% Similarity=0.078 Sum_probs=40.9
Q ss_pred eEEEEEEeC-CEEEEEEee------------CCEEEEEeCCCCcEEEEEecC---CCCeeEEeeCCCEEEEEC
Q 023864 151 FGEGLTLLG-EKLFQVTWL------------QKTGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSD 207 (276)
Q Consensus 151 FgEGit~~g-~~LyqlTwk------------~~~v~V~D~~tlk~i~~~~~~---~~EGWGLT~Dg~~L~vSD 207 (276)
.+-+|+++. +.||..|=- .+.++.+|+++.++..-+..+ .+-|..+++|++.|||+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 355788874 799997742 348999999888764444322 135777899999999964
No 350
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=43.50 E-value=2.6e+02 Score=27.79 Aligned_cols=101 Identities=10% Similarity=0.054 Sum_probs=61.2
Q ss_pred CEEEEEEeeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCCCEEEEE--------CC------CceEEEEcCCCCcEEEE
Q 023864 160 EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGS--------DG------SSMLYQIDPQTLKVIRK 225 (276)
Q Consensus 160 ~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg~~L~vS--------DG------S~~L~viDp~t~~vi~~ 225 (276)
.+++.++|..+.+..++...... .+ -.-+-.+++|..|+.. || .+.|..+| +|++++.+
T Consensus 226 ~~i~elD~~Gkvv~~~~lp~g~~--~~----HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGeVv~e 298 (571)
T 3elq_A 226 QHWYEFDMMGQVLEDHKLPRGFA--DA----THESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGRVVDV 298 (571)
T ss_dssp TEEEEECTTCCEEEEEECCTTEE--CB----CSCEEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSCEEEE
T ss_pred cEEEEECCCCcEEEEEECCCCcc--cc----ccceEEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCCEEEE
Confidence 45666666666655555422100 00 0123356677766632 33 45889999 99999998
Q ss_pred EEeee--C------------------------C--------------------EeeeeeeeeEEEC--CEEEEEeCCCCC
Q 023864 226 DIVRY--K------------------------G--------------------REVRNLNELEFIK--GEVWANVWQVWP 257 (276)
Q Consensus 226 I~V~~--~------------------------g--------------------~pv~~lNELE~id--G~lyANvw~s~d 257 (276)
+...+ + | .---++|-+++.. +.+.+..=+.
T Consensus 299 W~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~-- 376 (571)
T 3elq_A 299 WDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQ-- 376 (571)
T ss_dssp EEHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTT--
T ss_pred EEhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCcc--
Confidence 88632 0 0 1123689999884 5788887555
Q ss_pred eEEEEeCCCCcEE
Q 023864 258 CIPYAYLQAFGSS 270 (276)
Q Consensus 258 ~I~vIDp~T~~v~ 270 (276)
.|+.||. +|+++
T Consensus 377 ~I~~Id~-tG~V~ 388 (571)
T 3elq_A 377 GVVKIGR-DKQVK 388 (571)
T ss_dssp EEEEEET-TSCEE
T ss_pred EEEEEcC-CCcEE
Confidence 6999996 76654
No 351
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.25 E-value=3e+02 Score=27.02 Aligned_cols=61 Identities=11% Similarity=0.037 Sum_probs=46.5
Q ss_pred CeEEEEeCCCC--------cEEEEeecCC---CceEEEEEEeC--CEEEEEEeeCCEEEEEeCCCCcEEEEEecC
Q 023864 128 SSVRRVALETG--------KVEAINQMEG---SYFGEGLTLLG--EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ 189 (276)
Q Consensus 128 S~I~~iDl~tg--------kv~~~~~l~~---~~FgEGit~~g--~~LyqlTwk~~~v~V~D~~tlk~i~~~~~~ 189 (276)
.+++++++... |-...+.+|+ ..|+..+-+.. +-+|++| |-|-+++||..|...+-.-...
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT-K~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT-KYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp CEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE-TTSEEEEEETTTCCEEEEEECC
T ss_pred cEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe-cCceEEEEecccceeeeeeccc
Confidence 78999988543 2233445554 78999999986 7999988 6789999999999988665543
No 352
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=38.05 E-value=17 Score=21.75 Aligned_cols=12 Identities=58% Similarity=0.999 Sum_probs=7.9
Q ss_pred CCCCCCCCCCCC
Q 023864 19 DRPAPSPSPSPS 30 (276)
Q Consensus 19 ~~~~~~~~~~~~ 30 (276)
-||||-|..+++
T Consensus 11 sRPAPKPP~s~t 22 (26)
T 2rqw_B 11 SRPAPKPPSSAS 22 (26)
T ss_dssp SSCCCCCSSCSC
T ss_pred CCCCCCCCCCCc
Confidence 368988775443
No 353
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=37.75 E-value=1.1e+02 Score=30.51 Aligned_cols=91 Identities=16% Similarity=0.023 Sum_probs=51.8
Q ss_pred EEEEeCCCCcEEEEEecC------C----CC----eeEEeeCCCEEEEECCCceEEEEcCCCCcEEEEEEeeeCCEeeee
Q 023864 172 GFIYDQNNLNKLEEFTHQ------M----KD----GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (276)
Q Consensus 172 v~V~D~~tlk~i~~~~~~------~----~E----GWGLT~Dg~~L~vSDGS~~L~viDp~t~~vi~~I~V~~~g~pv~~ 237 (276)
.++||. +.++.-..+.. . ++ ||--.+||..++.+ | ..++.+|. .++++.++....+....
T Consensus 177 ~~i~D~-~G~lrW~~~~~~~~~~~~~~~~~~g~l~~~~g~~nG~l~~g~-G-~~i~elD~-~Gkvv~~~~lp~g~~~~-- 250 (571)
T 3elq_A 177 TFIVDT-EGEYRWWLDQDTFYDGRDRDINKRGYLMGIRETPRGTFTAVQ-G-QHWYEFDM-MGQVLEDHKLPRGFADA-- 250 (571)
T ss_dssp EEEECT-TSCEEEECCGGGTCCSSSCCGGGCSCCEEEEECTTSCEEEEE-B-TEEEEECT-TCCEEEEEECCTTEECB--
T ss_pred eEEEcC-CCcEEEEeCcccccccceeeccCCCeEEEEEecCCCCEEEec-C-cEEEEECC-CCcEEEEEECCCCcccc--
Confidence 688995 44555444421 0 11 34445677777764 3 46999996 58888777664211111
Q ss_pred eeeeE-EECCEEEEEe--------------CCCCCeEEEEeCCCCcEE
Q 023864 238 LNELE-FIKGEVWANV--------------WQVWPCIPYAYLQAFGSS 270 (276)
Q Consensus 238 lNELE-~idG~lyANv--------------w~s~d~I~vIDp~T~~v~ 270 (276)
--|.. ..||.+++-+ +.. |.|+.|| +||+++
T Consensus 251 HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vd-D~I~EVD-~tGeVv 296 (571)
T 3elq_A 251 THESIETPNGTVLLRVGKSNYRRDDGVHVTTIR-DHILEVD-KSGRVV 296 (571)
T ss_dssp CSCEEECTTSCEEEEEEETTEECTTSCEECCCS-CEEEEEC-TTSCEE
T ss_pred ccceEEcCCCcEEEEEecccccCCCCcccceec-cEEEEEC-CCCCEE
Confidence 11222 2266544322 235 8999999 998776
No 354
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=36.06 E-value=77 Score=30.97 Aligned_cols=22 Identities=14% Similarity=0.250 Sum_probs=15.9
Q ss_pred CCceEEEEcCCCCcEEEEEEee
Q 023864 208 GSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 208 GS~~L~viDp~t~~vi~~I~V~ 229 (276)
+.+.|.++|+++++.+.++.+.
T Consensus 486 ~~S~LlILDA~~l~~vArv~LP 507 (529)
T 3npe_A 486 GTSELLVVNAADMRLEATVQLP 507 (529)
T ss_dssp CCEEEEEEETTTTEEEEEEEES
T ss_pred CcEEEEEEeCCCCccceEEECC
Confidence 6667777777777777777663
No 355
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=35.49 E-value=2.9e+02 Score=26.06 Aligned_cols=73 Identities=14% Similarity=0.185 Sum_probs=51.8
Q ss_pred EEEEecCCE--EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--CEEEEEEeeCCEEEEEeCCCCcEEE
Q 023864 109 GLLYAENDT--LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 109 GL~~~~dg~--LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~~LyqlTwk~~~v~V~D~~tlk~i~ 184 (276)
-+.+..|.. +-|..| +.++|.++|++++.-..+.++... . ++.+ .++..|-- +..+-+||.++.++++
T Consensus 30 ~lTmESDkyicVrE~~~--~~~~VvIiDl~n~~~~~Rrpi~Ad----s-AIMnP~~~ViALra-g~~LQiFnletK~klk 101 (365)
T 2xzh_A 30 TLTMESDKFICIREKVG--EQAQVVIIDMNDPSNPIRRPISAD----S-AIMNPASKVIALKA-GKTLQIFNIEMKSKMK 101 (365)
T ss_dssp TEEEEETTEEEEEEEET--TEEEEEEEETTSTTSCEEEECCCS----E-EEECSSSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred eeeeecCceEEEEecCC--CCCEEEEEECCCCCCccccccccc----e-eeeCCCccEEEEec-CCeEEEechHHhhhhc
Confidence 456766665 457666 778999999999765555566643 2 3322 45555553 8899999999999999
Q ss_pred EEecC
Q 023864 185 EFTHQ 189 (276)
Q Consensus 185 ~~~~~ 189 (276)
.+.++
T Consensus 102 s~~~~ 106 (365)
T 2xzh_A 102 AHTMT 106 (365)
T ss_dssp EEECS
T ss_pred ceecC
Confidence 99864
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=34.05 E-value=1.4e+02 Score=29.61 Aligned_cols=59 Identities=17% Similarity=0.161 Sum_probs=40.6
Q ss_pred CceEEEEecCCEEEEEcCC----------CCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--CEEEE
Q 023864 106 FTQGLLYAENDTLFESTGL----------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQ 164 (276)
Q Consensus 106 FTQGL~~~~dg~LyeStG~----------yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~~Lyq 164 (276)
-.-+|.|+++|.||.++-. .+.+.+..+++.+|++.+-...|..-=--|+++.. ..||+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 3578999999999987642 25678999999999987665555331124666654 35554
No 357
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=33.74 E-value=4.6e+02 Score=27.90 Aligned_cols=93 Identities=14% Similarity=0.015 Sum_probs=59.6
Q ss_pred CCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC------CEEEEEEe---------eCCEEEEEeCC--CCcEEEEEecC
Q 023864 127 RSSVRRVALETGKVEAINQMEGSYFGEGLTLLG------EKLFQVTW---------LQKTGFIYDQN--NLNKLEEFTHQ 189 (276)
Q Consensus 127 ~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g------~~LyqlTw---------k~~~v~V~D~~--tlk~i~~~~~~ 189 (276)
.+.|+.+|+.+.+++..++|++.-.+..++... ..+.+=|- ..|++++|+.. .++.+.+-+..
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 578999999999998888888766665555431 23333331 34677777753 45555555554
Q ss_pred CCCeeEEeeCCCEEEEECCCceEEEEcCCCCc
Q 023864 190 MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLK 221 (276)
Q Consensus 190 ~~EGWGLT~Dg~~L~vSDGS~~L~viDp~t~~ 221 (276)
+--.+|+.-+.+|.++=| .+|.++|...-+
T Consensus 886 -g~v~al~~~~g~Lla~ig-~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 886 -GAVYSMVEFNGKLLASIN-STVRLYEWTTEK 915 (1158)
T ss_dssp -SCEEEEEEETTEEEEEET-TEEEEEEECTTS
T ss_pred -CcCEEEeeeCCEEEEEcC-CEEEEEECCCCc
Confidence 456678876667777665 567777765433
No 358
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=32.72 E-value=3.7e+02 Score=26.40 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=61.3
Q ss_pred EEEEecCCE--EEEEcCCCCCCeEEEEeCCCCcEEEEeecCCCceEEEEEEeC--CEEEEEEeeCCEEEEEeCCCCcEEE
Q 023864 109 GLLYAENDT--LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQKTGFIYDQNNLNKLE 184 (276)
Q Consensus 109 GL~~~~dg~--LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~~~FgEGit~~g--~~LyqlTwk~~~v~V~D~~tlk~i~ 184 (276)
-+++..|.. +-|..| +.++|.++|+.++.-..+.++... . ++.+ .++..|-- +..+-|||.++.++++
T Consensus 29 ~~TmESDkyicVrE~~~--~~~~vvIiDl~~~~~~~rrpi~Ad----s-AIMnP~~~iiALra-g~~lQiFnle~K~klk 100 (494)
T 1bpo_A 29 TLTMESDKFICIREKVG--EQAQVVIIDMNDPSNPIRRPISAD----S-AIMNPASKVIALKA-GKTLQIFNIEMKSKMK 100 (494)
T ss_dssp TEEEEETTEEEEEECCT--TCCEEEEEETTSTTSCEEEECCCS----E-EEECSSSSCEEEEE-TTEEEEEETTTTEEEE
T ss_pred eeeeecCceEEEEecCC--CCCeEEEEECCCCCcceecccccc----e-eeeCCCCcEEEEec-CCeEEEEchHHhhhhc
Confidence 356766665 446666 888999999999765455556543 2 3322 45555553 8999999999999999
Q ss_pred EEecC-CCCeeEEeeCCCEEEEECCCceEEEEcC
Q 023864 185 EFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDP 217 (276)
Q Consensus 185 ~~~~~-~~EGWGLT~Dg~~L~vSDGS~~L~viDp 217 (276)
.+.++ .-.=|---.+...-+|++ ..||.++.
T Consensus 101 s~~~~e~VvfWkWis~~~l~lVT~--taVyHWsi 132 (494)
T 1bpo_A 101 AHTMTDDVTFWKWISLNTVALVTD--NAVYHWSM 132 (494)
T ss_dssp EEECSSCCCEEEEEETTEEEEECS--SEEEEEES
T ss_pred ceecCCCceEEEecCCCeEEEEcC--CeeEEecc
Confidence 99864 112233333333334443 45555554
No 359
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=28.70 E-value=4.1e+02 Score=26.60 Aligned_cols=21 Identities=19% Similarity=0.088 Sum_probs=17.8
Q ss_pred CCeEEEEeCCCCcEEEEeecC
Q 023864 127 RSSVRRVALETGKVEAINQME 147 (276)
Q Consensus 127 ~S~I~~iDl~tgkv~~~~~l~ 147 (276)
...|.++|-.||+.+.+++..
T Consensus 228 pEyL~vfdG~TG~~l~~~~~~ 248 (591)
T 2zux_A 228 PEYLTVFQGSTGKELVTANFE 248 (591)
T ss_dssp CCEEEEEETTTCCEEEEEECS
T ss_pred CcEEEEEeCCCCCEEecccCC
Confidence 446999999999999998764
No 360
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=27.96 E-value=2.3e+02 Score=22.62 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=46.6
Q ss_pred EEecCCCCCceEEEEecCCEEEE-------EcCCCCCCeEE--EEeCCCCcEEEEe-ecCCCceEEEEEEeCCEEEEEEe
Q 023864 98 EFPHDPRAFTQGLLYAENDTLFE-------STGLYGRSSVR--RVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTW 167 (276)
Q Consensus 98 ~~Phd~~aFTQGL~~~~dg~Lye-------StG~yg~S~I~--~iDl~tgkv~~~~-~l~~~~FgEGit~~g~~LyqlTw 167 (276)
++|.....+-.|+.+-=||.+|. -.|.-|...++ ..|+.||+..... +-+.. + | .+....+=+|..+
T Consensus 4 t~~i~a~~lkkG~~i~~~g~p~~Vve~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~-v-e-~~~ve~~~~qylY 80 (138)
T 1iz6_A 4 KTKVQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAE-V-D-VPIIDKKTAQVIA 80 (138)
T ss_dssp EEEEEGGGCCTTSEEEETTEEEEEEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSE-E-E-EECCEEEEEEEEE
T ss_pred eEEEEHHHccCCCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEECCCCCEEEEEecCCCE-E-e-eceEEEEEEEEEE
Confidence 56666677777887766676654 23433555544 4788888775543 32222 1 1 1223345566666
Q ss_pred eCCEEEE-EeCCCCcEE
Q 023864 168 LQKTGFI-YDQNNLNKL 183 (276)
Q Consensus 168 k~~~v~V-~D~~tlk~i 183 (276)
.++..++ .|.+|.+++
T Consensus 81 ~dg~~~~fMD~etyeq~ 97 (138)
T 1iz6_A 81 ITPDTVQIMDMETYETF 97 (138)
T ss_dssp ECSSEEEEECTTTCCEE
T ss_pred eCCCEEEEEeCCCCceE
Confidence 5554443 577777754
No 361
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=26.29 E-value=1e+02 Score=29.58 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=15.1
Q ss_pred CCeEEEEeCCCCcEEEEeecCCC
Q 023864 127 RSSVRRVALETGKVEAINQMEGS 149 (276)
Q Consensus 127 ~S~I~~iDl~tgkv~~~~~l~~~ 149 (276)
-+.|.++|++||+.. ....+++
T Consensus 400 ~~~l~K~D~~tg~~~-~~~~g~g 421 (490)
T 2biw_A 400 LQAILKVDLESGTET-LRSFAPH 421 (490)
T ss_dssp CCEEEEEETTTTEEE-EEECTTT
T ss_pred CCeEEEEECCCCCEE-EEECCCC
Confidence 367999999999763 3444443
No 362
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=23.24 E-value=2.6e+02 Score=23.00 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=34.4
Q ss_pred EEEeeCCEEEEEeCCCCcEEEEEecCCCCeeEEeeCC----CEEEE-ECCCc
Q 023864 164 QVTWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDG----KVLFG-SDGSS 210 (276)
Q Consensus 164 qlTwk~~~v~V~D~~tlk~i~~~~~~~~EGWGLT~Dg----~~L~v-SDGS~ 210 (276)
+|...++.+-++|+.|..++..+|...--=||...|. ...|+ .|++.
T Consensus 58 ~L~v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t 109 (148)
T 3d8d_A 58 LLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLT 109 (148)
T ss_dssp EEEEETTEEEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEECTTT
T ss_pred EEEEcCCeEEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEecCCC
Confidence 4556699999999999999999997733567776555 24454 56543
No 363
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=21.79 E-value=2.6e+02 Score=22.12 Aligned_cols=83 Identities=11% Similarity=0.149 Sum_probs=46.2
Q ss_pred EEecCCCCCceEEEEecCCEEEEE-------cCCCCCCe--EEEEeCCCCcEEEEe-ecCCCceEEEEEEeCCEEEEEEe
Q 023864 98 EFPHDPRAFTQGLLYAENDTLFES-------TGLYGRSS--VRRVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTW 167 (276)
Q Consensus 98 ~~Phd~~aFTQGL~~~~dg~LyeS-------tG~yg~S~--I~~iDl~tgkv~~~~-~l~~~~FgEGit~~g~~LyqlTw 167 (276)
++|...+.+-.|+.+-=||.+|.- +|.-|... +...|+.||+..... +-+.. + |- +....+=||..+
T Consensus 6 t~~i~~~~lrkG~~i~~~g~p~~Vve~~~~KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~k-v-e~-~~ve~~~~qylY 82 (136)
T 1bkb_A 6 TKYVEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQ-V-EV-PIIEKFTAQILS 82 (136)
T ss_dssp CEEEEGGGCCTTCEEEETTEEEEEEEEEEECCSTTSCCEEEEEEEETTTCCEEEEEEETTSE-E-EE-CCCEEEEEEEEE
T ss_pred EEEEEHHHccCCCEEEECCEEEEEEEEEEecCCCCCceEEEEEEEECCCCCeEEEEEcCCCE-e-ee-ceEEEEEEEEEE
Confidence 566666777788877667776642 24323554 445788999876543 22211 1 11 222345555555
Q ss_pred eCCEEE-EEeCCCCcEE
Q 023864 168 LQKTGF-IYDQNNLNKL 183 (276)
Q Consensus 168 k~~~v~-V~D~~tlk~i 183 (276)
.++..+ ..|.+|.+++
T Consensus 83 ~dg~~~~fMD~etyeq~ 99 (136)
T 1bkb_A 83 VSGDVIQLMDMRDYKTI 99 (136)
T ss_dssp ECSSEEEEEETTTCCEE
T ss_pred ecCCEEEEEeCCCCeEE
Confidence 554443 3577777653
No 364
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=21.45 E-value=2.9e+02 Score=23.04 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=45.9
Q ss_pred EEEecCCCCCceEEEEecCCEEEE-------EcCCCCCCeEE--EEeCCCCcEEEEe-ecCCCceEEEEEEeCCEEEEEE
Q 023864 97 NEFPHDPRAFTQGLLYAENDTLFE-------STGLYGRSSVR--RVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVT 166 (276)
Q Consensus 97 ~~~Phd~~aFTQGL~~~~dg~Lye-------StG~yg~S~I~--~iDl~tgkv~~~~-~l~~~~FgEGit~~g~~LyqlT 166 (276)
.+||...+.+-.|+.+-=||.+|. -+|.-|...++ ..|+-||++.... +-+.. + | ......+=||..
T Consensus 25 ~t~pi~~~dlrkG~~I~idG~P~~Vve~~~~KpGKhG~A~vr~k~knl~TGk~~E~tf~s~~k-v-e-~~~ver~~~QyL 101 (167)
T 3hks_A 25 KTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHN-C-D-VPHVNRVDYQLI 101 (167)
T ss_dssp CEEEEEGGGCCTTSEEEETTEEEEEEEEEEECSSTTCCCEEEEEEEETTTCCEEEEEEETTSE-E-E-EECCEEEEEEEE
T ss_pred ccEEEEHHHccCCCEEEECCEEEEEEEEEEeCCCCCCceEEEEEEEEcCCCCEEEEEEcCCCE-E-E-eeeEEEEEEEEE
Confidence 477887888888887765676654 34544556444 5688888775543 22211 1 1 122234555555
Q ss_pred ee-C-CEEEEEeCCCCcE
Q 023864 167 WL-Q-KTGFIYDQNNLNK 182 (276)
Q Consensus 167 wk-~-~~v~V~D~~tlk~ 182 (276)
+. + +.....|.+|.++
T Consensus 102 Y~d~d~~~~fMD~etyeQ 119 (167)
T 3hks_A 102 DITEDGFVSLLTDSGGTK 119 (167)
T ss_dssp EECTTSBEEEECTTSCEE
T ss_pred EECCCCEEEEEcCCCceE
Confidence 55 2 2445555555554
No 365
>2kxc_B ESPF-like protein; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Escherichia coli}
Probab=21.30 E-value=58 Score=22.15 Aligned_cols=19 Identities=11% Similarity=0.160 Sum_probs=12.5
Q ss_pred cccCCCCCCCCCCCCCCCC
Q 023864 16 SQSDRPAPSPSPSPSSSSS 34 (276)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (276)
--..||++.|.+++.++-+
T Consensus 27 ~~p~rPa~P~Pt~~~~~~~ 45 (48)
T 2kxc_B 27 HIPPAPNWPAPTPPVQNEQ 45 (48)
T ss_pred cCCCCCCCCCCCCcccccc
Confidence 3456788777777766644
No 366
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=21.25 E-value=76 Score=26.31 Aligned_cols=34 Identities=29% Similarity=0.573 Sum_probs=25.9
Q ss_pred CCeeEEeeCCCE--EEEECCCceEEEEcCCCCcEEEEEEee
Q 023864 191 KDGWGLATDGKV--LFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (276)
Q Consensus 191 ~EGWGLT~Dg~~--L~vSDGS~~L~viDp~t~~vi~~I~V~ 229 (276)
+..|| +|+. |+++| +.|.++||+|..++...++.
T Consensus 48 ~~~wg---~gq~~~L~v~~--~tlrLvD~~tk~~L~~~pI~ 83 (148)
T 3d8d_A 48 SGGWG---EGKDLLLQLED--ETLKLVEPQSQALLHAQPII 83 (148)
T ss_dssp STTCS---TTCEEEEEEET--TEEEEECTTTCCEEEEEEGG
T ss_pred ccccc---cCceEEEEEcC--CeEEEecCCCCceEEEeeEE
Confidence 46777 4665 55565 78999999999988887775
No 367
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=21.06 E-value=1.4e+02 Score=29.03 Aligned_cols=57 Identities=14% Similarity=0.113 Sum_probs=35.6
Q ss_pred EEEcCCCCcEEEEEEee---eCCEeeeeeeeeEEEC---CEEEEEeCC---CCCeEEEEeCCCCcEE
Q 023864 213 YQIDPQTLKVIRKDIVR---YKGREVRNLNELEFIK---GEVWANVWQ---VWPCIPYAYLQAFGSS 270 (276)
Q Consensus 213 ~viDp~t~~vi~~I~V~---~~g~pv~~lNELE~id---G~lyANvw~---s~d~I~vIDp~T~~v~ 270 (276)
+.+|+.+.++.++.... +.+..+..+|+ .+.. .++|+++.. --|.|+++|.+||++.
T Consensus 378 ~rl~l~~g~~~~~~l~~~~~~~~~EfP~In~-~~~Gr~~Ry~Y~~~~~~~~~~~~l~K~D~~tg~~~ 443 (529)
T 3npe_A 378 IRLDARTGRSTRRAVLPPSQQVNLEVGMVNR-NLLGRETRYAYLAVAEPWPKVSGFAKVDLSTGELT 443 (529)
T ss_dssp EEECTTTCCEEEEESSCSSSCCCEEEEEECG-GGTTSCCSEEEEEECCSTTSCCEEEEEETTTCCEE
T ss_pred EEEcCCCCCEEeEEecccccCccccCceECh-hHcCCccceEEEeccCCCCCcceEEEEecCCCceE
Confidence 35688888776554332 23445566665 2332 369988742 1278999999998854
No 368
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=20.71 E-value=5.3e+02 Score=24.24 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=54.0
Q ss_pred eeeeEEEEEE-ecC-CCCCceEEEEecC-CEEEEEcCCCCCCeEEEEeCCCCcEEEEeecCC-CceEEEEEEeCCEEEEE
Q 023864 90 IYTIQVVNEF-PHD-PRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQV 165 (276)
Q Consensus 90 ~~t~~Vv~~~-Phd-~~aFTQGL~~~~d-g~LyeStG~yg~S~I~~iDl~tgkv~~~~~l~~-~~FgEGit~~g~~Lyql 165 (276)
..+-+.++-+ |.+ ...|.=.+.+++. |.+|.-|= -..|+.||++||..+...++-. ..|...-.-..+-++.+
T Consensus 243 ~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK---~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~V 319 (365)
T 2xzh_A 243 PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK---YGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGV 319 (365)
T ss_dssp CCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEET---TSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEE
T ss_pred CcccccceeeCCccccCCceEEEEecccCCEEEEEeC---CcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEE
Confidence 3444555533 432 5789999999865 78887654 3689999999999988887765 45633211123566666
Q ss_pred EeeCCEEEEEeC
Q 023864 166 TWLQKTGFIYDQ 177 (276)
Q Consensus 166 Twk~~~v~V~D~ 177 (276)
| +.|.|+-+..
T Consensus 320 n-r~GqVl~v~v 330 (365)
T 2xzh_A 320 N-RKGQVLSVCV 330 (365)
T ss_dssp E-TTCEEEEEEE
T ss_pred c-CCCEEEEEEE
Confidence 6 5555554433
No 369
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum}
Probab=20.55 E-value=4.2e+02 Score=22.92 Aligned_cols=131 Identities=10% Similarity=0.101 Sum_probs=65.4
Q ss_pred CCCe--EEEEeCCCCcEEEEe-ecCCCceEEEEEEeCCEEEEEEeeCCEEEE-EeCCCCcEEEEEecC-CCCeeEEeeCC
Q 023864 126 GRSS--VRRVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQKTGFI-YDQNNLNKLEEFTHQ-MKDGWGLATDG 200 (276)
Q Consensus 126 g~S~--I~~iDl~tgkv~~~~-~l~~~~FgEGit~~g~~LyqlTwk~~~v~V-~D~~tlk~i~~~~~~-~~EGWGLT~Dg 200 (276)
|... +...|+.||+..... +-+.. + | .+....+=+|..+.++..++ .|.+|++++ +++.+ .++...+=.+|
T Consensus 63 G~A~vr~klknl~TG~~~e~tf~s~ek-v-e-~a~verr~~QylY~Dgd~y~FMD~ETyEQi-~l~~~~lgd~~~fLkEg 138 (215)
T 1yby_A 63 GAAFVRTKLKNIVTGATIEKTFNPTDK-M-P-KAHIERKDMQYLYNDGDLYYFMDTETFEQL-PLGKDKIGDALKFVKEN 138 (215)
T ss_dssp -CCEEEEEEEETTTCCEEEEEECTTCE-E-C-BCCCEEEEEEEEEEETTEEEEECTTTCCEE-EEEHHHHTTTTTTCCTT
T ss_pred CceEEEEEEEECCCCCEEEEEECCCCE-E-e-cceEEEEEEEEEEeCCCEEEEccCCCCeeE-EecHHHhhhHHhhCCCC
Confidence 5444 445799999876544 22221 1 1 12234567888887666655 699999876 33321 11111111223
Q ss_pred CEEEE--ECCCceEEEEcCCCCcEEEEEEeee---------CCEeeeeeeeeEEECC-EEEEEeCCCCCeEEEEeCCCCc
Q 023864 201 KVLFG--SDGSSMLYQIDPQTLKVIRKDIVRY---------KGREVRNLNELEFIKG-EVWANVWQVWPCIPYAYLQAFG 268 (276)
Q Consensus 201 ~~L~v--SDGS~~L~viDp~t~~vi~~I~V~~---------~g~pv~~lNELE~idG-~lyANvw~s~d~I~vIDp~T~~ 268 (276)
..+-+ -|| ++.-+++-++-+..-+.+.. ..+|.. ...| .|-|-.+-.....++||++||+
T Consensus 139 ~~v~v~~~~g--~~i~velP~~V~l~V~eteP~vkGdTa~~~~KpA~------leTG~~v~VP~FI~~Gd~I~VdT~~g~ 210 (215)
T 1yby_A 139 EIVKVLSHKG--NVFGIEPPNFVELEVTDTEPGFKGDTATGATKPAI------VETGASIKVPLFVNKGDIIRIDTRTGE 210 (215)
T ss_dssp CEEEEEEETT--EEEEEECCSEEEEEEEEC-------CCSCCEEEEE------ETTSCEEEEETTCCTTCEEEEETTTTE
T ss_pred CEEEEEEECC--EEEEEECCCEEEEEEEEcCCCccccccCCCCccEE------EeCCcEEEeCCcEeCCCEEEEECCCCe
Confidence 22212 222 44455555543333233311 113433 2356 3555555444789999999975
Done!