BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023869
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0IGM7|BBX20_ARATH B-box zinc finger protein 20 OS=Arabidopsis thaliana GN=BBX20 PE=1
SV=1
Length = 242
Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 146/210 (69%), Gaps = 25/210 (11%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
MKIWC VCDKEEASVFC ADEAALC CDR VH ANKLA KH RF+L SP++K++PLCDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 61 CQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVTFNTTYNPS 120
C ERRALLFCQEDRAILCRECDIPIH+A+E+TKKHNRFLLTGVK++AS S + + S
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISASPSAYPRASNSNS 120
Query: 121 PSSSTCCDTTKTTTTTSIDDQKKISPSSHSNSIFSSNSTPRD-----------NHI---- 165
++ T + ++ + PSS SN +F+S+S+ +H+
Sbjct: 121 AAAFGRAKTRPKSVSSEV-------PSSASNEVFTSSSSTTTSNCYYGIEENYHHVSDSG 173
Query: 166 ---SDTSSISEYLMETLPGWRVDDFLDPPS 192
T SISEYLMETLPGWRV+D L+ PS
Sbjct: 174 SGSGCTGSISEYLMETLPGWRVEDLLEHPS 203
>sp|Q9LQZ7|STHX_ARATH Probable salt tolerance-like protein At1g75540 OS=Arabidopsis
thaliana GN=At1g75540 PE=1 SV=1
Length = 331
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 148/210 (70%), Gaps = 19/210 (9%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKE--SPLC 58
MKI CDVCDKEEASVFC+ADEA+LC CD +VHHANKLASKH RF+L+ PS SPLC
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 59 DICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVTFNTTYN 118
DICQ+++ALLFCQ+DRAILC++CD IH A+E+TKKH+RFLLTGVKL+A++SV Y
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSV-----YK 115
Query: 119 PSPSSSTCCDTTK--TTTTTSIDD----QKKISPSSHSNSI--FS--SNSTPRDNHISDT 168
P+ SS+ + + + +SI + +K +S SN I FS + N T
Sbjct: 116 PTSKSSSSSSSNQDFSVPGSSISNPPPLKKPLSAPPQSNKIQPFSKINGGDASVNQWGST 175
Query: 169 SSISEYLMETLPGWRVDDFLDP--PSYATS 196
S+ISEYLM+TLPGW V+DFLD P+Y S
Sbjct: 176 STISEYLMDTLPGWHVEDFLDSSLPTYGFS 205
>sp|Q9SYM2|STHY_ARATH Probable salt tolerance-like protein At1g78600 OS=Arabidopsis
thaliana GN=At1g78600 PE=1 SV=2
Length = 299
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
MKI C+VC+ EA+V C ADEAALC ACD ++H ANKLA KH R L S S P CDI
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL-SASASSIPKCDI 59
Query: 61 CQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKL 105
CQE FC +DRA+LCR+CD+ IH + + H RFLLTG+K+
Sbjct: 60 CQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKV 104
>sp|Q96288|STO_ARATH Salt tolerance protein OS=Arabidopsis thaliana GN=STO PE=1 SV=1
Length = 248
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
MKI CDVC+K A+V C ADEAALC CD +H ANKLASKH R +L S S K P CDI
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTK-FPRCDI 59
Query: 61 CQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASV 111
CQE+ A +FC EDRA+LCR+CD IH A+ + H RFL TG+K+ ++++
Sbjct: 60 CQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTI 110
>sp|Q9SID1|STH_ARATH Salt tolerance-like protein OS=Arabidopsis thaliana GN=STH PE=1
SV=2
Length = 238
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
MKI CDVC+K A++ C ADEAALC CD VH ANKLASKH R L S S K P CDI
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPP-CDI 59
Query: 61 CQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASAS 110
C E+ A +FC EDRA+LCR+CD H + + H RFL TG+++ S++
Sbjct: 60 CLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSST 109
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C A++FC AD A LC CD ++H ANKLAS+H R LC++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERV----------WLCEVCEQA 57
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLT------GVKLTASASVTF 113
A + C+ D A LC CD IH A+ +++H R +T G +AS+SV F
Sbjct: 58 PAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNF 112
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 2 KIW-CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKH------PRFNLVSPSYKE 54
++W C+VC++ A V C AD AALCV CDR +H AN L+ +H P ++ V P+
Sbjct: 47 RVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSA 106
Query: 55 SPLCDICQE 63
S + E
Sbjct: 107 SSSVNFVDE 115
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%)
Query: 55 SPLCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVT 112
S LCD C+ A LFC+ D A LC +CD IH A++ +H R L V A A VT
Sbjct: 5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVT 62
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 12/98 (12%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD CD A V+C AD A LC+ACD++VH AN+L +KH R S LCD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR----------SLLCDSCNES 62
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTG 102
+ LFC+ +R++LC+ CD H AS + H+R G
Sbjct: 63 PSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEG 98
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 51 SYKESPLCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASAS 110
++ LCD C AL++C+ D A LC CD +H A++ KH R LL
Sbjct: 6 GHQRDRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLC--------- 56
Query: 111 VTFNTTYNPSPSSSTCCDTTKTTTTTSIDDQKKISPSS-HSNSIFSS 156
+ N SP SS C+T ++ + D Q + SS HS F
Sbjct: 57 ----DSCNESP-SSLFCETERSVLCQNCDWQHHTASSSLHSRRPFEG 98
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C A+++C D A LC++CD +VH ANKLAS+H R +C++C++
Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVW----------MCEVCEQA 55
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLT 101
A + C+ D A LC CD IH A+ ++H R +T
Sbjct: 56 PAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 2 KIW-CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSY 52
++W C+VC++ A V C AD AALCV CDR +H AN LA +H R V+P Y
Sbjct: 45 RVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV-PVTPFY 95
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 55 SPLCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVT 112
S LCD C+ A L+C+ D A LC CD +H A++ +H R + V A A VT
Sbjct: 3 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C +V+C AD A LC +CD +VH AN+LAS+H R +C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVR----------VCQSCERA 61
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVTFN 114
A FC+ D A LC CD IH A+ ++H R + + + +S N
Sbjct: 62 PAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATN 111
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C +V+C AD A LC++CD +VH AN++AS+H R +C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVR----------VCESCERA 69
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVTFNTTYNPSPSSS 124
A C+ D A LC CD +H A+ ++H R + + + +S+T TT++ S +
Sbjct: 70 PAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMT--TTHHQSEKTM 127
Query: 125 T 125
T
Sbjct: 128 T 128
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana
GN=COL2 PE=1 SV=1
Length = 347
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C +V+C AD A LC CD RVH AN++AS+H R +C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVR----------VCQSCESA 65
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNR 97
A C+ D A LC CD IH A+ ++H R
Sbjct: 66 PAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 2 KIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDIC 61
++ CD C + A +FC AD A LC+ CD++VH AN L+ KH R S +CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR----------SQICDNC 55
Query: 62 QERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASA 109
+ C D ILC+ECD +H + + H R + G SA
Sbjct: 56 GNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSA 103
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 3 IWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQ 62
+ C+ C + A +FC AD A LC+ CD+ VH AN L+ KH R S +CD C
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR----------SQICDNCS 59
Query: 63 ERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTG 102
+ + C D +LC+ECD +H + + H R + G
Sbjct: 60 KEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEG 99
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
M CD C ++ + V+C +D A LC++CDR VH AN L+ +H R + +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERRALLFCQEDRAILCRECDIPIH--KASEYTKKHNR 97
C + A + C ++R LC+ CD H K S T H R
Sbjct: 51 CNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKR 89
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 57 LCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
+CD C E+R++++C+ D A LC CD +H A+ +K+H+R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 17/124 (13%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C A+VFC D A LC+ACD R+H ++H R +C++C++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERV----------WVCEVCEQA 67
Query: 65 RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGV---KLTASASVTFNTTYNPSP 121
A + C+ D A LC CD IH A+ +H R + TA A ++ ++T+
Sbjct: 68 PAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILG 127
Query: 122 SSST 125
SS+T
Sbjct: 128 SSTT 131
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 2 KIW-CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPR 44
++W C+VC++ A+V C AD AALCV+CD +H AN LAS+H R
Sbjct: 57 RVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHER 100
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana
GN=COL9 PE=2 SV=1
Length = 372
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
M CD C ++ + V+C +D A LC++CDR VH AN L+ +H R + +C+
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSR----------TLVCER 50
Query: 61 CQERRALLFCQEDRAILCRECDIPIH 86
C + A + C E+R LC+ CD H
Sbjct: 51 CNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 57 LCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
+CD C E+R++++C+ D A LC CD +H A+ +K+H+R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>sp|Q9C9F4|COLX_ARATH Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana
GN=At1g68190 PE=2 SV=1
Length = 356
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
M+ C+ C A V+C AD A LC+ CD +VH AN L+ +H R + LCD
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLR----------TVLCDS 59
Query: 61 CQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNR 97
C+ + ++ C + + LC C+ H + +H R
Sbjct: 60 CKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94
Score = 38.9 bits (89), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 57 LCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
+C+ C+ RA+++C D A LC CD +H A+ + +H R +L
Sbjct: 13 VCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
M+ CD C E+A ++C +D A LC+ CD VH AN L+ +H R S LC+
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR----------SLLCEK 50
Query: 61 CQERRALLFCQEDRAILCREC 81
C + + C + LC+ C
Sbjct: 51 CSLQPTAVHCMNENVSLCQGC 71
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 58 CDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
CD C +AL++C+ D A LC CD+ +H A+ +++H R LL
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDICQER 64
CD C + V+C AD A LC +CD RVH AN++AS+H R +C+ C+
Sbjct: 35 CDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVR----------VCEACERA 84
Query: 65 RALLFCQEDRAILCRECDIPIHKAS 89
A L C+ D A LC CD+ +H A+
Sbjct: 85 PAALACRADAAALCVACDVQVHSAN 109
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana
GN=COL6 PE=2 SV=2
Length = 406
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPS 51
CD C K A +C+AD+A LC ACD VH AN LA +H R L S S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 53 KESPLCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
K + CD C +RRA +C D A LC CD +H A+ ++H R L
Sbjct: 12 KTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 1 MKIWCDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKESPLCDI 60
M+ CD C +A ++C +D A LC+ CD VH AN L+ +H R S +C+
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR----------SLICEK 50
Query: 61 CQERRALLFCQEDRAILCREC 81
C + A + C +++ C+ C
Sbjct: 51 CFSQPAAIRCLDEKVSYCQGC 71
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 56 PLCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
P CD C +AL++C+ D A LC CD+ +H A+ + +H R L+
Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI 47
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPS 51
CD C K A +C+AD+A LC +CD VH AN LA +H R L + S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTAS 63
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 58 CDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVTFNTTY 117
CD C +RRA +C D A LC+ CD +H A+ ++H R L TAS +V ++ +
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLK----TASPAVVKHSNH 72
Query: 118 N 118
+
Sbjct: 73 S 73
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana
GN=COL7 PE=2 SV=1
Length = 392
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 5 CDVCDKE-EASVFCSADEAALCVACDRRVHHANKLASKHPRFNLVSPSYKES 55
CD C K AS +C AD+A LC +CD +H AN LA +H R L S S E+
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTET 73
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 58 CDICQER-RALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGVKLTASASVTFNTT 116
CD C +R RA +C D A LC+ CD IH A+ K+H R L T +A T +
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTTSVW 81
Query: 117 YNP------SPSSSTC 126
Y +P S +C
Sbjct: 82 YEGFRRKARTPRSKSC 97
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana
GN=COL8 PE=2 SV=2
Length = 319
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 5 CDVCDKEEASVFCSADEAALCVACDRRVHHANKLASKHPR 44
C++C + A +C++D+A LC CD VH AN +A+KH R
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER 60
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 53 KESPLCDICQERRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLL 100
K+ C++C + A+ +C D A LC CD +H A+ KH R L
Sbjct: 16 KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCL 63
>sp|Q8IYM9|TRI22_HUMAN E3 ubiquitin-protein ligase TRIM22 OS=Homo sapiens GN=TRIM22 PE=1
SV=1
Length = 498
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 4 WCDVC--DKEEASVFCSADEAALCVACDRRVHHANKLASKH-----PRFNLVSPSYKESP 56
+C C K + SV S E++ C C R N ++H R V S +E
Sbjct: 34 FCQACITAKIKESVIISRGESS-CPVCQTRFQPGNLRPNRHLANIVERVKEVKMSPQEGQ 92
Query: 57 LCDICQE--RRALLFCQEDRAILCRECDIPIHKASEYTKKHNRFLLTGV 103
D+C+ ++ +FC+ED ++C C++ S+ + H F + V
Sbjct: 93 KRDVCEHHGKKLQIFCKEDGKVICWVCEL-----SQEHQGHQTFRINEV 136
>sp|Q1ACD6|TRIM5_HYLSY Tripartite motif-containing protein 5 OS=Hylobates syndactylus
GN=TRIM5 PE=3 SV=1
Length = 494
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 25 CVACDRRVHHANKLASKH-----PRFNLVSPSYKESPLCDIC--QERRALLFCQEDRAIL 77
C C H N ++H + V S +E D C + LLFCQEDR ++
Sbjct: 55 CPVCRISYQHKNIQPNRHVANIVEKLREVKLSPEEGQKVDHCARHGEKLLLFCQEDRKVI 114
Query: 78 CRECDIPIHKASEYTKKHNRFL 99
C C+ S+ + H+ FL
Sbjct: 115 CWLCE-----RSQEHRGHHTFL 131
>sp|Q3ZEE5|TRIM5_HYLLA Tripartite motif-containing protein 5 OS=Hylobates lar GN=TRIM5
PE=3 SV=1
Length = 493
Score = 31.6 bits (70), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 25 CVACDRRVHHANKLASKH-----PRFNLVSPSYKESPLCDIC--QERRALLFCQEDRAIL 77
C C H N ++H + V S +E D C + LLFC+EDR ++
Sbjct: 54 CPVCRISYQHKNIRPNRHVANIVEKLREVKLSPEEGQKVDHCARHGEKLLLFCREDRKVI 113
Query: 78 CRECDIPIHKASEYTKKHNRFLLTGV 103
C C+ S+ + H+ FL+ V
Sbjct: 114 CWLCE-----RSQEHRGHHTFLMEEV 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,801,075
Number of Sequences: 539616
Number of extensions: 3865996
Number of successful extensions: 18751
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 16217
Number of HSP's gapped (non-prelim): 2222
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)