Query 023870
Match_columns 276
No_of_seqs 311 out of 2114
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:10:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ld4_A Anamorsin; methyltransf 99.8 4.9E-18 1.7E-22 141.4 11.4 146 4-154 10-176 (176)
2 4gek_A TRNA (CMO5U34)-methyltr 99.4 5.7E-12 2E-16 112.4 13.9 94 3-98 67-181 (261)
3 1vl5_A Unknown conserved prote 99.2 5.1E-11 1.7E-15 104.5 12.1 94 4-97 35-142 (260)
4 3dh0_A SAM dependent methyltra 99.2 7.2E-11 2.5E-15 100.5 12.1 138 4-147 35-194 (219)
5 3dtn_A Putative methyltransfer 99.2 2.6E-10 8.8E-15 98.2 14.0 93 4-98 42-151 (234)
6 1nkv_A Hypothetical protein YJ 99.2 1.1E-10 3.8E-15 101.7 11.4 121 4-125 34-184 (256)
7 4hg2_A Methyltransferase type 99.2 5.6E-11 1.9E-15 105.8 9.1 90 5-99 38-139 (257)
8 3dlc_A Putative S-adenosyl-L-m 99.2 3.6E-10 1.2E-14 95.4 13.2 121 5-126 43-201 (219)
9 3f4k_A Putative methyltransfer 99.2 4.5E-10 1.5E-14 97.9 13.9 123 3-125 43-193 (257)
10 3ujc_A Phosphoethanolamine N-m 99.2 1.7E-10 5.9E-15 100.6 10.9 121 4-125 53-203 (266)
11 3kkz_A Uncharacterized protein 99.1 4.1E-10 1.4E-14 99.2 13.1 122 4-125 44-193 (267)
12 1xxl_A YCGJ protein; structura 99.1 3.3E-10 1.1E-14 98.4 12.2 96 3-98 18-127 (239)
13 2o57_A Putative sarcosine dime 99.1 2E-10 6.7E-15 102.7 10.3 123 3-125 79-231 (297)
14 3bus_A REBM, methyltransferase 99.1 5.1E-10 1.8E-14 98.5 12.5 95 4-98 59-169 (273)
15 3sm3_A SAM-dependent methyltra 99.1 8.1E-10 2.8E-14 94.4 12.6 95 4-98 28-144 (235)
16 2yqz_A Hypothetical protein TT 99.1 9.3E-10 3.2E-14 95.9 13.1 92 3-94 36-140 (263)
17 3l8d_A Methyltransferase; stru 99.1 4E-10 1.4E-14 97.2 10.4 121 4-126 51-198 (242)
18 3ocj_A Putative exported prote 99.1 1.9E-10 6.4E-15 103.8 8.4 138 4-147 116-305 (305)
19 3hnr_A Probable methyltransfer 99.1 1.4E-09 4.9E-14 92.5 13.1 90 5-98 44-148 (220)
20 3i9f_A Putative type 11 methyl 99.1 6.5E-10 2.2E-14 91.0 10.5 116 4-128 15-148 (170)
21 4fsd_A Arsenic methyltransfera 99.1 6.2E-10 2.1E-14 104.0 11.7 123 4-126 81-249 (383)
22 2p7i_A Hypothetical protein; p 99.1 8.3E-10 2.8E-14 94.9 11.4 90 5-98 41-144 (250)
23 3g5l_A Putative S-adenosylmeth 99.1 4.3E-10 1.5E-14 98.0 9.7 89 6-96 44-146 (253)
24 3vc1_A Geranyl diphosphate 2-C 99.1 1.2E-09 4E-14 98.9 12.4 122 4-125 115-266 (312)
25 3e23_A Uncharacterized protein 99.1 7.4E-10 2.5E-14 93.9 10.2 141 3-149 40-205 (211)
26 3mgg_A Methyltransferase; NYSG 99.0 8.5E-10 2.9E-14 97.4 10.8 94 4-97 35-144 (276)
27 3h2b_A SAM-dependent methyltra 99.0 9.5E-10 3.2E-14 92.6 10.2 117 7-127 42-181 (203)
28 1y8c_A S-adenosylmethionine-de 99.0 2E-09 6.9E-14 92.5 12.2 91 5-96 36-143 (246)
29 3dli_A Methyltransferase; PSI- 99.0 7.7E-10 2.6E-14 95.9 9.0 117 3-126 38-182 (240)
30 3ccf_A Cyclopropane-fatty-acyl 99.0 1.7E-09 5.9E-14 95.9 11.4 92 4-100 55-159 (279)
31 3orh_A Guanidinoacetate N-meth 99.0 7.1E-10 2.4E-14 96.8 8.2 120 5-124 59-206 (236)
32 1pjz_A Thiopurine S-methyltran 99.0 6.6E-10 2.2E-14 94.7 7.7 91 4-94 20-139 (203)
33 3gu3_A Methyltransferase; alph 99.0 2.7E-09 9.1E-14 95.2 11.7 93 4-97 20-128 (284)
34 1xtp_A LMAJ004091AAA; SGPP, st 99.0 6.9E-10 2.4E-14 96.4 7.5 121 5-126 92-236 (254)
35 2p8j_A S-adenosylmethionine-de 99.0 2.7E-09 9.3E-14 89.9 9.7 95 4-98 21-131 (209)
36 3ou2_A SAM-dependent methyltra 98.9 1.3E-08 4.3E-13 86.0 13.6 91 4-98 44-149 (218)
37 4htf_A S-adenosylmethionine-de 98.9 3E-09 1E-13 94.5 10.1 92 6-97 68-175 (285)
38 2ex4_A Adrenal gland protein A 98.9 2.7E-09 9.2E-14 92.5 9.5 121 6-126 79-223 (241)
39 3bkw_A MLL3908 protein, S-aden 98.9 2.1E-09 7.3E-14 92.5 7.7 90 5-96 42-145 (243)
40 3g2m_A PCZA361.24; SAM-depende 98.9 1.8E-08 6.1E-13 90.3 13.9 92 6-98 82-193 (299)
41 1vlm_A SAM-dependent methyltra 98.9 1.1E-08 3.6E-13 87.6 11.8 114 6-125 47-185 (219)
42 1kpg_A CFA synthase;, cyclopro 98.9 9E-09 3.1E-13 91.4 11.4 92 4-98 62-171 (287)
43 3d2l_A SAM-dependent methyltra 98.9 3.5E-09 1.2E-13 91.2 8.3 91 4-95 31-137 (243)
44 3ege_A Putative methyltransfer 98.9 2.3E-09 7.9E-14 94.4 7.3 114 5-125 33-175 (261)
45 2a14_A Indolethylamine N-methy 98.9 2.1E-09 7.2E-14 95.1 6.6 122 5-126 54-236 (263)
46 2gb4_A Thiopurine S-methyltran 98.9 7.1E-09 2.4E-13 91.8 10.1 91 5-95 67-191 (252)
47 3e8s_A Putative SAM dependent 98.9 7.7E-09 2.6E-13 87.6 9.9 116 5-126 51-207 (227)
48 1zx0_A Guanidinoacetate N-meth 98.9 4.1E-09 1.4E-13 91.3 8.1 118 5-122 59-204 (236)
49 1ri5_A MRNA capping enzyme; me 98.9 1.8E-08 6E-13 89.3 12.3 94 4-97 62-176 (298)
50 3cgg_A SAM-dependent methyltra 98.9 3.1E-08 1.1E-12 81.7 12.9 113 4-125 44-172 (195)
51 3pfg_A N-methyltransferase; N, 98.9 1.3E-08 4.6E-13 89.1 10.8 87 4-95 48-151 (263)
52 3hem_A Cyclopropane-fatty-acyl 98.9 2.5E-08 8.6E-13 89.4 12.9 93 4-99 70-187 (302)
53 3g5t_A Trans-aconitate 3-methy 98.8 9.2E-09 3.2E-13 92.2 9.9 92 5-96 35-150 (299)
54 2fk8_A Methoxy mycolic acid sy 98.8 2.2E-08 7.5E-13 90.4 12.3 93 4-99 88-198 (318)
55 3dp7_A SAM-dependent methyltra 98.8 2.6E-08 8.7E-13 92.3 13.0 121 5-126 178-340 (363)
56 2aot_A HMT, histamine N-methyl 98.8 8.5E-10 2.9E-14 98.9 2.6 94 5-98 51-175 (292)
57 3lcc_A Putative methyl chlorid 98.8 6.7E-09 2.3E-13 89.5 7.9 117 8-125 68-204 (235)
58 3jwg_A HEN1, methyltransferase 98.8 2.9E-08 9.9E-13 84.5 11.6 92 5-96 28-142 (219)
59 2p35_A Trans-aconitate 2-methy 98.8 1.7E-08 5.8E-13 87.8 10.1 90 4-98 31-135 (259)
60 2gs9_A Hypothetical protein TT 98.8 5.3E-09 1.8E-13 88.5 6.3 92 4-99 34-136 (211)
61 2xvm_A Tellurite resistance pr 98.8 2.3E-08 7.8E-13 83.2 9.9 91 5-96 31-137 (199)
62 3jwh_A HEN1; methyltransferase 98.8 3.7E-08 1.3E-12 83.8 11.3 92 5-96 28-142 (217)
63 1ve3_A Hypothetical protein PH 98.8 2.3E-08 8E-13 85.0 9.9 94 4-97 36-144 (227)
64 2vdw_A Vaccinia virus capping 98.8 1.3E-08 4.3E-13 92.5 8.5 93 5-97 47-171 (302)
65 2i62_A Nicotinamide N-methyltr 98.8 1.7E-08 5.7E-13 88.0 9.0 122 5-126 55-237 (265)
66 3grz_A L11 mtase, ribosomal pr 98.8 1.9E-08 6.3E-13 84.9 8.6 132 4-152 58-203 (205)
67 3ofk_A Nodulation protein S; N 98.8 2.5E-08 8.5E-13 84.6 9.4 91 5-97 50-156 (216)
68 2kw5_A SLR1183 protein; struct 98.8 2.9E-08 1E-12 83.3 9.6 93 4-98 28-134 (202)
69 2pxx_A Uncharacterized protein 98.7 4.8E-08 1.7E-12 82.1 10.0 94 4-98 40-162 (215)
70 3cc8_A Putative methyltransfer 98.7 7.9E-08 2.7E-12 81.5 11.2 87 5-97 31-132 (230)
71 3e05_A Precorrin-6Y C5,15-meth 98.7 1.3E-07 4.3E-12 79.8 12.3 111 4-124 38-163 (204)
72 2r3s_A Uncharacterized protein 98.7 5.1E-08 1.7E-12 88.4 10.6 121 5-126 164-321 (335)
73 3fpf_A Mtnas, putative unchara 98.7 2.1E-08 7.3E-13 91.1 7.9 90 3-97 119-224 (298)
74 3i53_A O-methyltransferase; CO 98.7 4.8E-08 1.6E-12 89.0 10.2 120 5-126 168-319 (332)
75 3bkx_A SAM-dependent methyltra 98.7 1.2E-07 4E-12 83.3 12.3 95 4-98 41-162 (275)
76 3evz_A Methyltransferase; NYSG 98.7 1.9E-07 6.5E-12 79.9 13.2 114 3-122 52-200 (230)
77 1xdz_A Methyltransferase GIDB; 98.7 1.3E-07 4.5E-12 82.1 12.2 112 5-125 69-199 (240)
78 4df3_A Fibrillarin-like rRNA/T 98.7 1E-07 3.5E-12 83.7 11.4 124 4-130 75-219 (233)
79 2g72_A Phenylethanolamine N-me 98.7 1.9E-08 6.6E-13 89.6 6.7 121 6-126 71-254 (289)
80 3mcz_A O-methyltransferase; ad 98.7 6.2E-08 2.1E-12 88.7 10.2 133 7-147 180-350 (352)
81 3m70_A Tellurite resistance pr 98.7 7.4E-08 2.5E-12 85.5 10.2 90 6-96 120-224 (286)
82 3gwz_A MMCR; methyltransferase 98.7 1.4E-07 4.9E-12 87.4 11.7 121 4-126 200-354 (369)
83 3bxo_A N,N-dimethyltransferase 98.7 1.3E-07 4.4E-12 81.0 10.6 87 5-96 39-142 (239)
84 4a6d_A Hydroxyindole O-methylt 98.6 2.5E-07 8.7E-12 85.4 13.0 136 5-148 178-348 (353)
85 1yzh_A TRNA (guanine-N(7)-)-me 98.6 3.5E-07 1.2E-11 77.8 12.5 112 6-124 41-178 (214)
86 4e2x_A TCAB9; kijanose, tetron 98.6 1.7E-08 5.8E-13 94.8 4.0 117 4-126 105-251 (416)
87 1qzz_A RDMB, aclacinomycin-10- 98.6 2.7E-07 9.2E-12 85.0 11.9 122 4-127 180-338 (374)
88 3mti_A RRNA methylase; SAM-dep 98.6 1.5E-07 5.2E-12 77.8 9.2 96 3-98 19-138 (185)
89 3bgv_A MRNA CAP guanine-N7 met 98.6 1.8E-07 6.3E-12 84.3 10.4 93 5-97 33-157 (313)
90 3ggd_A SAM-dependent methyltra 98.6 1.1E-07 3.7E-12 82.3 8.4 93 4-98 54-166 (245)
91 1x19_A CRTF-related protein; m 98.6 4.2E-07 1.4E-11 83.6 12.6 92 4-97 188-297 (359)
92 3g07_A 7SK snRNA methylphospha 98.6 9.6E-08 3.3E-12 85.7 8.0 55 42-96 155-221 (292)
93 1tw3_A COMT, carminomycin 4-O- 98.6 3.3E-07 1.1E-11 84.1 11.6 122 4-127 181-338 (360)
94 3lst_A CALO1 methyltransferase 98.6 1.2E-07 4E-12 87.2 8.4 118 4-126 182-334 (348)
95 1dus_A MJ0882; hypothetical pr 98.6 6.3E-07 2.2E-11 73.7 11.7 94 4-98 50-160 (194)
96 1fbn_A MJ fibrillarin homologu 98.6 1.2E-06 4E-11 75.5 13.8 116 4-127 72-212 (230)
97 3thr_A Glycine N-methyltransfe 98.5 1.8E-07 6.1E-12 83.1 8.3 93 5-97 56-177 (293)
98 2fca_A TRNA (guanine-N(7)-)-me 98.5 7E-07 2.4E-11 76.4 11.4 110 6-122 38-173 (213)
99 3g89_A Ribosomal RNA small sub 98.5 6.5E-07 2.2E-11 78.8 11.0 114 5-126 79-210 (249)
100 3lpm_A Putative methyltransfer 98.5 6.5E-07 2.2E-11 78.6 11.0 114 4-125 46-198 (259)
101 2avn_A Ubiquinone/menaquinone 98.5 2.7E-07 9.4E-12 80.8 8.6 88 5-97 53-154 (260)
102 1wzn_A SAM-dependent methyltra 98.5 5.7E-07 1.9E-11 77.9 10.1 91 5-96 40-146 (252)
103 3reo_A (ISO)eugenol O-methyltr 98.5 3.2E-07 1.1E-11 85.2 8.5 115 4-126 201-353 (368)
104 3p9c_A Caffeic acid O-methyltr 98.5 7.7E-07 2.6E-11 82.5 11.1 86 4-97 199-300 (364)
105 3m33_A Uncharacterized protein 98.5 4E-07 1.4E-11 78.2 8.5 105 4-125 46-164 (226)
106 3bwc_A Spermidine synthase; SA 98.5 8.6E-07 2.9E-11 80.3 10.9 119 5-126 94-238 (304)
107 3hm2_A Precorrin-6Y C5,15-meth 98.5 1.4E-06 4.8E-11 71.1 11.3 107 4-121 23-146 (178)
108 2qe6_A Uncharacterized protein 98.5 9.8E-07 3.4E-11 78.8 11.0 91 7-98 78-199 (274)
109 2zfu_A Nucleomethylin, cerebra 98.4 2.3E-07 7.9E-12 78.6 6.4 107 5-125 66-176 (215)
110 3eey_A Putative rRNA methylase 98.4 1.2E-06 4E-11 73.1 10.7 95 4-98 20-142 (197)
111 2ip2_A Probable phenazine-spec 98.4 5.8E-07 2E-11 81.6 9.4 88 8-97 169-274 (334)
112 3dmg_A Probable ribosomal RNA 98.4 1.1E-06 3.7E-11 82.4 11.3 92 6-97 233-342 (381)
113 2pwy_A TRNA (adenine-N(1)-)-me 98.4 7.4E-07 2.5E-11 77.3 9.5 112 4-127 94-223 (258)
114 1l3i_A Precorrin-6Y methyltran 98.4 1.8E-06 6E-11 70.8 10.4 111 4-125 31-156 (192)
115 3njr_A Precorrin-6Y methylase; 98.4 5E-06 1.7E-10 70.6 13.2 108 4-122 53-174 (204)
116 3mq2_A 16S rRNA methyltransfer 98.4 1.5E-06 5.2E-11 73.7 10.0 120 4-124 25-180 (218)
117 3p9n_A Possible methyltransfer 98.4 7.6E-07 2.6E-11 74.1 7.9 94 5-98 43-156 (189)
118 1yb2_A Hypothetical protein TA 98.4 1.4E-06 4.6E-11 77.3 9.8 110 4-126 108-235 (275)
119 3lbf_A Protein-L-isoaspartate 98.4 1.7E-06 5.7E-11 72.9 9.6 89 4-97 75-176 (210)
120 2ipx_A RRNA 2'-O-methyltransfe 98.4 3.6E-06 1.2E-10 72.4 11.7 120 4-126 75-215 (233)
121 1p91_A Ribosomal RNA large sub 98.3 2.7E-06 9.3E-11 74.5 10.8 86 5-100 84-183 (269)
122 3mb5_A SAM-dependent methyltra 98.3 2.4E-06 8.2E-11 74.3 10.4 111 4-127 91-221 (255)
123 1fp2_A Isoflavone O-methyltran 98.3 7.5E-07 2.6E-11 81.8 7.3 86 4-97 186-290 (352)
124 3dxy_A TRNA (guanine-N(7)-)-me 98.3 9.9E-07 3.4E-11 76.1 7.5 92 6-97 34-152 (218)
125 1nt2_A Fibrillarin-like PRE-rR 98.3 7.2E-06 2.5E-10 70.1 12.7 120 4-128 55-195 (210)
126 2nxc_A L11 mtase, ribosomal pr 98.3 8.4E-07 2.9E-11 78.1 6.8 113 4-126 118-242 (254)
127 1i9g_A Hypothetical protein RV 98.3 3.4E-06 1.2E-10 74.3 10.6 112 4-126 97-228 (280)
128 3ckk_A TRNA (guanine-N(7)-)-me 98.3 2.6E-06 9E-11 74.3 9.7 93 5-97 45-170 (235)
129 3q7e_A Protein arginine N-meth 98.3 2.3E-06 8E-11 78.8 9.5 91 4-94 64-172 (349)
130 1fp1_D Isoliquiritigenin 2'-O- 98.3 1.1E-06 3.8E-11 81.3 7.2 86 4-97 207-308 (372)
131 3uwp_A Histone-lysine N-methyl 98.3 6.7E-07 2.3E-11 84.8 5.4 95 3-98 170-291 (438)
132 1vbf_A 231AA long hypothetical 98.3 3.9E-06 1.3E-10 71.7 9.6 89 4-98 68-168 (231)
133 3iv6_A Putative Zn-dependent a 98.2 3.3E-06 1.1E-10 75.2 9.3 89 3-97 42-150 (261)
134 2fyt_A Protein arginine N-meth 98.2 3.3E-06 1.1E-10 77.6 9.6 89 4-92 62-168 (340)
135 2ozv_A Hypothetical protein AT 98.2 9.5E-06 3.3E-10 71.5 12.1 95 3-97 33-172 (260)
136 1o54_A SAM-dependent O-methylt 98.2 5.4E-06 1.9E-10 73.3 10.5 110 4-126 110-237 (277)
137 2b3t_A Protein methyltransfera 98.2 5.4E-06 1.8E-10 73.4 10.5 112 5-125 108-260 (276)
138 2qm3_A Predicted methyltransfe 98.2 7.5E-06 2.6E-10 76.0 11.6 112 6-122 172-303 (373)
139 4dzr_A Protein-(glutamine-N5) 98.2 2.2E-07 7.4E-12 77.9 0.9 114 5-126 29-190 (215)
140 2frn_A Hypothetical protein PH 98.2 5.5E-06 1.9E-10 73.8 9.8 114 4-122 123-251 (278)
141 3htx_A HEN1; HEN1, small RNA m 98.2 6.2E-06 2.1E-10 84.0 10.9 92 5-97 720-836 (950)
142 2yxd_A Probable cobalt-precorr 98.2 1.5E-05 5E-10 64.8 11.3 104 4-121 33-150 (183)
143 3p2e_A 16S rRNA methylase; met 98.2 2.9E-06 1E-10 73.4 7.4 121 4-124 22-181 (225)
144 1zg3_A Isoflavanone 4'-O-methy 98.2 3.3E-06 1.1E-10 77.7 7.6 85 5-97 192-295 (358)
145 3giw_A Protein of unknown func 98.2 1.1E-05 3.7E-10 72.5 10.5 92 8-99 80-204 (277)
146 1af7_A Chemotaxis receptor met 98.1 2.3E-06 8E-11 76.7 6.0 53 42-94 195-251 (274)
147 1ixk_A Methyltransferase; open 98.1 1.3E-05 4.4E-10 72.9 10.7 116 4-123 116-270 (315)
148 2ift_A Putative methylase HI07 98.1 4.2E-06 1.4E-10 70.8 7.0 91 6-97 53-165 (201)
149 3q87_B N6 adenine specific DNA 98.1 1.5E-05 5.2E-10 65.5 10.0 105 5-126 22-147 (170)
150 2esr_A Methyltransferase; stru 98.1 3.6E-06 1.2E-10 68.9 6.0 95 4-98 29-141 (177)
151 1g8a_A Fibrillarin-like PRE-rR 98.1 4.2E-05 1.4E-09 65.2 12.7 87 4-94 71-177 (227)
152 1jsx_A Glucose-inhibited divis 98.1 1.7E-05 6E-10 66.3 10.1 87 6-97 65-167 (207)
153 1dl5_A Protein-L-isoaspartate 98.1 1.1E-05 3.7E-10 73.1 9.3 89 4-97 73-177 (317)
154 3r0q_C Probable protein argini 98.1 5.1E-06 1.7E-10 77.4 7.0 92 4-96 61-170 (376)
155 2fpo_A Methylase YHHF; structu 98.1 8.4E-06 2.9E-10 68.9 7.8 92 6-97 54-162 (202)
156 1ej0_A FTSJ; methyltransferase 98.1 9.7E-06 3.3E-10 65.1 7.7 91 4-98 20-139 (180)
157 2fhp_A Methylase, putative; al 98.1 5.3E-06 1.8E-10 68.1 6.2 94 5-98 43-157 (187)
158 2yvl_A TRMI protein, hypotheti 98.1 2.5E-05 8.5E-10 67.1 10.7 89 4-97 89-192 (248)
159 1i1n_A Protein-L-isoaspartate 98.1 1.2E-05 4.1E-10 68.5 8.6 89 4-97 75-184 (226)
160 3gdh_A Trimethylguanosine synt 98.0 3.4E-07 1.1E-11 79.1 -1.5 89 6-95 78-181 (241)
161 2pjd_A Ribosomal RNA small sub 98.0 7.5E-06 2.6E-10 75.1 7.2 91 5-97 195-305 (343)
162 3adn_A Spermidine synthase; am 98.0 3.3E-05 1.1E-09 69.7 11.2 93 5-97 82-200 (294)
163 2yxe_A Protein-L-isoaspartate 98.0 2.1E-05 7.1E-10 66.3 9.3 89 4-97 75-179 (215)
164 3id6_C Fibrillarin-like rRNA/T 98.0 9E-05 3.1E-09 64.7 13.6 119 4-131 74-219 (232)
165 1g6q_1 HnRNP arginine N-methyl 98.0 1.7E-05 5.7E-10 72.4 8.9 89 5-93 37-143 (328)
166 3sso_A Methyltransferase; macr 98.0 2.5E-06 8.5E-11 80.6 3.2 57 40-97 263-326 (419)
167 2vdv_E TRNA (guanine-N(7)-)-me 98.0 5.5E-05 1.9E-09 65.7 11.6 93 4-96 47-174 (246)
168 3b5i_A S-adenosyl-L-methionine 98.0 4.7E-05 1.6E-09 71.2 11.7 94 7-100 53-230 (374)
169 1ws6_A Methyltransferase; stru 98.0 4.2E-06 1.4E-10 67.6 4.0 92 6-98 41-150 (171)
170 2b25_A Hypothetical protein; s 97.9 2E-05 6.8E-10 71.7 8.3 90 4-97 103-221 (336)
171 2y1w_A Histone-arginine methyl 97.9 1.6E-05 5.5E-10 73.1 7.7 90 5-95 49-155 (348)
172 1jg1_A PIMT;, protein-L-isoasp 97.9 3.6E-05 1.2E-09 66.2 9.4 89 4-98 89-192 (235)
173 3tma_A Methyltransferase; thum 97.9 4.5E-05 1.5E-09 70.0 10.3 94 4-97 201-319 (354)
174 4dcm_A Ribosomal RNA large sub 97.9 3.3E-05 1.1E-09 72.0 9.5 92 5-97 221-336 (375)
175 3u81_A Catechol O-methyltransf 97.9 2.4E-05 8.3E-10 66.7 7.7 92 5-97 57-172 (221)
176 2plw_A Ribosomal RNA methyltra 97.9 1.7E-05 5.8E-10 66.1 5.9 92 3-98 19-157 (201)
177 2i7c_A Spermidine synthase; tr 97.9 8.4E-05 2.9E-09 66.4 10.8 93 5-97 77-194 (283)
178 2b2c_A Spermidine synthase; be 97.9 6.8E-05 2.3E-09 68.3 10.1 92 5-96 107-223 (314)
179 3gjy_A Spermidine synthase; AP 97.8 4.5E-05 1.5E-09 69.7 8.8 90 9-98 92-203 (317)
180 3ntv_A MW1564 protein; rossman 97.8 4.1E-05 1.4E-09 66.0 8.1 90 5-97 70-178 (232)
181 1iy9_A Spermidine synthase; ro 97.8 6.3E-05 2.2E-09 67.0 9.5 93 5-97 74-191 (275)
182 2efj_A 3,7-dimethylxanthine me 97.8 4E-05 1.4E-09 71.9 8.4 95 7-101 53-231 (384)
183 1r18_A Protein-L-isoaspartate( 97.8 5.7E-05 2E-09 64.5 8.6 89 3-97 81-196 (227)
184 2pbf_A Protein-L-isoaspartate 97.8 4.9E-05 1.7E-09 64.7 7.8 90 3-97 77-195 (227)
185 3fzg_A 16S rRNA methylase; met 97.8 1.1E-05 3.9E-10 68.8 3.8 91 4-95 47-152 (200)
186 1u2z_A Histone-lysine N-methyl 97.8 5.6E-05 1.9E-09 71.9 9.0 92 4-96 240-360 (433)
187 1xj5_A Spermidine synthase 1; 97.8 7E-05 2.4E-09 68.8 9.3 92 4-95 118-235 (334)
188 3dr5_A Putative O-methyltransf 97.8 2.2E-05 7.5E-10 67.7 5.5 89 6-97 56-165 (221)
189 3tfw_A Putative O-methyltransf 97.8 4.4E-05 1.5E-09 66.6 7.4 90 5-97 62-172 (248)
190 2yxl_A PH0851 protein, 450AA l 97.8 0.00022 7.7E-09 67.8 12.6 95 4-98 257-392 (450)
191 2gpy_A O-methyltransferase; st 97.8 6.2E-05 2.1E-09 64.4 7.8 91 5-97 53-162 (233)
192 1uir_A Polyamine aminopropyltr 97.8 3.5E-05 1.2E-09 70.0 6.4 93 5-97 76-197 (314)
193 2o07_A Spermidine synthase; st 97.7 7.6E-05 2.6E-09 67.6 8.5 93 5-97 94-211 (304)
194 3b3j_A Histone-arginine methyl 97.7 4.5E-05 1.5E-09 73.5 7.1 89 5-94 157-262 (480)
195 3ajd_A Putative methyltransfer 97.7 0.00011 3.9E-09 65.0 9.0 95 4-98 81-214 (274)
196 1inl_A Spermidine synthase; be 97.7 0.00014 4.8E-09 65.4 9.4 93 5-97 89-207 (296)
197 2pt6_A Spermidine synthase; tr 97.7 0.00025 8.5E-09 64.6 11.1 93 5-97 115-232 (321)
198 3a27_A TYW2, uncharacterized p 97.7 0.00015 5E-09 64.4 9.3 92 3-98 116-222 (272)
199 2nyu_A Putative ribosomal RNA 97.7 4.3E-05 1.5E-09 63.2 5.1 92 3-98 19-148 (196)
200 3c3p_A Methyltransferase; NP_9 97.6 5.8E-05 2E-09 63.6 5.8 87 6-96 56-161 (210)
201 1sqg_A SUN protein, FMU protei 97.6 0.00034 1.1E-08 66.1 11.4 95 4-98 244-377 (429)
202 3tm4_A TRNA (guanine N2-)-meth 97.6 0.00045 1.5E-08 64.0 11.5 110 4-125 215-349 (373)
203 3tr6_A O-methyltransferase; ce 97.6 7.6E-05 2.6E-09 63.3 5.7 90 5-97 63-176 (225)
204 2xyq_A Putative 2'-O-methyl tr 97.6 5.9E-05 2E-09 68.1 5.1 113 3-126 60-195 (290)
205 3duw_A OMT, O-methyltransferas 97.6 9.1E-05 3.1E-09 62.8 5.8 91 5-97 57-169 (223)
206 2igt_A SAM dependent methyltra 97.5 0.00013 4.5E-09 66.8 7.1 116 5-121 152-297 (332)
207 3lec_A NADB-rossmann superfami 97.5 0.00052 1.8E-08 59.9 9.9 114 2-126 17-147 (230)
208 2h00_A Methyltransferase 10 do 97.5 0.0015 5.3E-08 56.3 13.0 89 6-94 65-191 (254)
209 4azs_A Methyltransferase WBDD; 97.5 5.9E-05 2E-09 73.9 4.0 92 5-96 65-174 (569)
210 1zq9_A Probable dimethyladenos 97.5 0.00028 9.7E-09 63.0 7.9 87 4-92 26-144 (285)
211 3bzb_A Uncharacterized protein 97.5 0.00066 2.2E-08 60.3 10.2 118 5-124 78-233 (281)
212 4hc4_A Protein arginine N-meth 97.4 0.00028 9.5E-09 65.9 8.0 86 6-93 83-187 (376)
213 1wy7_A Hypothetical protein PH 97.4 0.0025 8.7E-08 52.9 13.3 106 5-122 48-169 (207)
214 3hp7_A Hemolysin, putative; st 97.4 0.0003 1E-08 63.5 7.9 113 6-124 85-228 (291)
215 3r3h_A O-methyltransferase, SA 97.4 0.00012 4.1E-09 63.8 5.0 90 5-97 59-172 (242)
216 2frx_A Hypothetical protein YE 97.4 0.00068 2.3E-08 65.2 10.7 94 5-98 116-249 (479)
217 1mjf_A Spermidine synthase; sp 97.4 0.0002 7E-09 63.7 6.6 92 5-97 74-195 (281)
218 2wa2_A Non-structural protein 97.4 0.00014 4.8E-09 65.0 5.1 93 3-98 79-196 (276)
219 3cbg_A O-methyltransferase; cy 97.4 0.00031 1.1E-08 60.4 7.0 90 5-97 71-184 (232)
220 3opn_A Putative hemolysin; str 97.4 0.00011 3.7E-09 63.9 4.0 112 6-124 37-180 (232)
221 2hnk_A SAM-dependent O-methylt 97.4 0.00028 9.7E-09 60.7 6.6 89 5-96 59-182 (239)
222 1sui_A Caffeoyl-COA O-methyltr 97.4 0.00019 6.6E-09 62.6 5.5 89 5-96 78-191 (247)
223 2avd_A Catechol-O-methyltransf 97.3 0.00021 7.3E-09 60.6 5.1 90 5-97 68-181 (229)
224 1m6e_X S-adenosyl-L-methionnin 97.3 0.0004 1.4E-08 64.5 7.1 52 49-100 129-214 (359)
225 1ne2_A Hypothetical protein TA 97.3 0.0011 3.9E-08 55.0 9.2 81 5-94 50-146 (200)
226 3gnl_A Uncharacterized protein 97.3 0.0011 3.8E-08 58.3 9.3 114 2-126 17-147 (244)
227 3dou_A Ribosomal RNA large sub 97.3 0.00031 1.1E-08 59.0 5.4 91 3-98 22-142 (191)
228 3o4f_A Spermidine synthase; am 97.2 0.0049 1.7E-07 55.6 13.5 93 6-98 83-201 (294)
229 1o9g_A RRNA methyltransferase; 97.2 0.0003 1E-08 60.9 5.2 53 45-97 149-216 (250)
230 3c3y_A Pfomt, O-methyltransfer 97.2 0.00051 1.7E-08 59.4 6.4 89 5-96 69-182 (237)
231 3m6w_A RRNA methylase; rRNA me 97.2 0.00067 2.3E-08 65.0 7.7 95 4-98 99-232 (464)
232 3kr9_A SAM-dependent methyltra 97.2 0.0021 7.1E-08 55.8 10.0 114 2-126 11-141 (225)
233 2cmg_A Spermidine synthase; tr 97.2 0.00057 2E-08 60.5 6.6 86 5-97 71-173 (262)
234 2p41_A Type II methyltransfera 97.2 0.00022 7.6E-09 64.5 3.8 94 3-98 79-194 (305)
235 2bm8_A Cephalosporin hydroxyla 97.1 0.00058 2E-08 59.1 6.0 85 6-96 81-188 (236)
236 3c0k_A UPF0064 protein YCCW; P 97.1 0.0022 7.5E-08 59.7 9.9 114 5-120 219-362 (396)
237 1nv8_A HEMK protein; class I a 97.1 0.0024 8.3E-08 56.9 9.7 88 6-95 123-249 (284)
238 2as0_A Hypothetical protein PH 97.0 0.0015 5.1E-08 60.8 8.4 94 5-98 216-338 (396)
239 2yx1_A Hypothetical protein MJ 97.0 0.0021 7.3E-08 58.6 9.1 90 4-99 193-295 (336)
240 3m4x_A NOL1/NOP2/SUN family pr 97.0 0.0008 2.7E-08 64.4 6.4 95 4-98 103-237 (456)
241 4dmg_A Putative uncharacterize 97.0 0.002 6.9E-08 60.3 8.8 95 4-98 212-329 (393)
242 2b78_A Hypothetical protein SM 97.0 0.001 3.5E-08 61.9 6.8 115 5-121 211-355 (385)
243 3frh_A 16S rRNA methylase; met 97.0 0.004 1.4E-07 54.9 9.8 89 5-95 104-206 (253)
244 1wxx_A TT1595, hypothetical pr 96.9 0.0025 8.6E-08 59.1 8.6 93 6-98 209-328 (382)
245 3v97_A Ribosomal RNA large sub 96.9 0.0012 4.1E-08 66.4 6.6 109 5-121 538-675 (703)
246 2oxt_A Nucleoside-2'-O-methylt 96.9 0.0023 8E-08 56.6 7.6 93 3-98 71-188 (265)
247 3k6r_A Putative transferase PH 96.8 0.0052 1.8E-07 55.0 9.5 114 3-121 122-250 (278)
248 2km1_A Protein DRE2; yeast, an 96.8 0.00087 3E-08 53.7 3.6 60 52-124 52-114 (136)
249 2f8l_A Hypothetical protein LM 96.7 0.0031 1.1E-07 57.4 7.5 112 6-122 130-280 (344)
250 1uwv_A 23S rRNA (uracil-5-)-me 96.5 0.027 9.2E-07 53.1 12.6 109 5-124 285-410 (433)
251 2h1r_A Dimethyladenosine trans 96.4 0.0083 2.8E-07 53.8 8.1 67 4-72 40-119 (299)
252 2jjq_A Uncharacterized RNA met 96.3 0.017 5.7E-07 54.6 10.0 88 4-95 288-387 (425)
253 3lcv_B Sisomicin-gentamicin re 96.3 0.012 4.1E-07 52.5 8.4 115 5-121 131-265 (281)
254 2qfm_A Spermine synthase; sper 96.0 0.0088 3E-07 55.5 5.9 93 6-98 188-317 (364)
255 1yub_A Ermam, rRNA methyltrans 95.9 0.00068 2.3E-08 58.8 -1.9 90 4-95 27-145 (245)
256 2okc_A Type I restriction enzy 95.8 0.029 1E-06 52.9 8.8 92 5-97 170-309 (445)
257 2qy6_A UPF0209 protein YFCK; s 95.7 0.006 2E-07 53.8 3.4 72 41-123 150-230 (257)
258 1qam_A ERMC' methyltransferase 94.9 0.056 1.9E-06 46.7 7.0 77 4-84 28-117 (244)
259 2ih2_A Modification methylase 94.7 0.065 2.2E-06 49.4 7.3 111 6-122 39-188 (421)
260 3gru_A Dimethyladenosine trans 94.7 0.11 3.8E-06 46.6 8.5 67 4-71 48-126 (295)
261 2b9e_A NOL1/NOP2/SUN domain fa 94.7 0.18 6.1E-06 45.4 9.9 93 4-97 100-236 (309)
262 2zig_A TTHA0409, putative modi 94.5 0.034 1.2E-06 49.6 4.6 79 43-124 22-132 (297)
263 3ldg_A Putative uncharacterize 94.3 0.16 5.4E-06 47.2 8.9 72 25-97 265-345 (384)
264 3k0b_A Predicted N6-adenine-sp 94.2 0.12 4E-06 48.2 8.0 72 25-97 272-352 (393)
265 3evf_A RNA-directed RNA polyme 93.8 0.17 5.7E-06 45.1 7.7 57 42-98 123-187 (277)
266 3ldu_A Putative methylase; str 93.8 0.14 4.8E-06 47.5 7.6 71 26-97 267-346 (385)
267 4gqb_A Protein arginine N-meth 93.7 0.19 6.6E-06 49.8 8.7 82 9-92 360-464 (637)
268 3c6k_A Spermine synthase; sper 93.2 0.15 5.3E-06 47.4 6.7 92 6-97 205-333 (381)
269 3vyw_A MNMC2; tRNA wobble urid 92.7 0.077 2.6E-06 48.0 3.8 70 43-123 168-243 (308)
270 2dul_A N(2),N(2)-dimethylguano 92.5 0.13 4.5E-06 47.6 5.2 87 6-95 47-164 (378)
271 3bt7_A TRNA (uracil-5-)-methyl 91.3 0.38 1.3E-05 44.0 6.8 86 7-97 214-328 (369)
272 2ar0_A M.ecoki, type I restric 91.2 0.25 8.5E-06 48.0 5.7 72 26-97 221-314 (541)
273 3ua3_A Protein arginine N-meth 91.1 0.31 1.1E-05 48.9 6.4 54 39-92 470-531 (745)
274 3cvo_A Methyltransferase-like 90.7 0.87 3E-05 38.5 8.1 66 26-95 61-154 (202)
275 3v97_A Ribosomal RNA large sub 90.4 0.74 2.5E-05 46.0 8.5 71 26-96 266-348 (703)
276 3axs_A Probable N(2),N(2)-dime 90.4 0.44 1.5E-05 44.4 6.4 88 5-95 51-158 (392)
277 3fut_A Dimethyladenosine trans 89.9 0.65 2.2E-05 40.9 6.8 65 4-71 45-122 (271)
278 1boo_A Protein (N-4 cytosine-s 89.5 0.33 1.1E-05 43.8 4.7 56 42-97 14-86 (323)
279 3tqs_A Ribosomal RNA small sub 89.2 0.91 3.1E-05 39.5 7.1 64 4-69 27-106 (255)
280 3ll7_A Putative methyltransfer 86.8 0.34 1.2E-05 45.5 3.0 91 4-94 91-208 (410)
281 3r24_A NSP16, 2'-O-methyl tran 86.8 0.85 2.9E-05 41.2 5.4 92 3-98 106-220 (344)
282 1m6y_A S-adenosyl-methyltransf 85.8 0.65 2.2E-05 41.6 4.2 64 4-67 24-106 (301)
283 4auk_A Ribosomal RNA large sub 85.1 3.7 0.00013 38.0 9.0 114 3-121 208-333 (375)
284 2r6z_A UPF0341 protein in RSP 84.2 0.19 6.6E-06 43.9 -0.1 83 5-87 82-189 (258)
285 3khk_A Type I restriction-modi 83.4 1.7 5.8E-05 42.1 6.2 76 46-122 315-421 (544)
286 4fzv_A Putative methyltransfer 82.6 1.5 5E-05 40.4 5.1 57 41-97 204-286 (359)
287 3lkd_A Type I restriction-modi 82.5 9 0.00031 37.0 11.0 115 6-122 221-383 (542)
288 2vz8_A Fatty acid synthase; tr 81.0 0.66 2.3E-05 52.8 2.6 42 55-96 1307-1349(2512)
289 2oyr_A UPF0341 protein YHIQ; a 80.8 0.91 3.1E-05 39.7 2.9 86 4-89 84-194 (258)
290 2wk1_A NOVP; transferase, O-me 80.6 1.7 5.8E-05 38.6 4.7 87 28-121 173-265 (282)
291 1g60_A Adenine-specific methyl 78.2 1.8 6.1E-05 37.4 4.0 41 75-123 54-94 (260)
292 1qyr_A KSGA, high level kasuga 76.6 3.8 0.00013 35.4 5.7 64 4-69 19-100 (252)
293 3gcz_A Polyprotein; flavivirus 75.4 4.2 0.00015 36.1 5.6 96 3-98 87-204 (282)
294 1eg2_A Modification methylase 73.4 2.7 9.3E-05 37.7 4.0 55 43-97 39-108 (319)
295 3ftd_A Dimethyladenosine trans 70.7 13 0.00045 31.8 7.6 76 4-84 29-118 (249)
296 3eld_A Methyltransferase; flav 68.2 17 0.0006 32.4 7.9 55 44-98 132-194 (300)
297 2px2_A Genome polyprotein [con 65.5 27 0.00092 30.7 8.5 92 3-98 70-186 (269)
298 2hwk_A Helicase NSP2; rossman 57.3 15 0.00051 32.9 5.3 41 58-98 205-257 (320)
299 3ps9_A TRNA 5-methylaminomethy 56.8 8.2 0.00028 37.8 4.0 69 43-122 158-235 (676)
300 4e5v_A Putative THUA-like prot 53.6 96 0.0033 27.0 10.1 86 8-97 5-95 (281)
301 3s1s_A Restriction endonucleas 51.7 49 0.0017 33.8 8.7 54 44-97 383-467 (878)
302 3uzu_A Ribosomal RNA small sub 50.2 28 0.00097 30.3 6.1 62 4-68 40-123 (279)
303 3b6i_A Flavoprotein WRBA; flav 50.1 92 0.0031 24.5 9.2 110 8-124 2-140 (198)
304 2k4x_A 30S ribosomal protein S 49.3 7.1 0.00024 25.8 1.5 19 243-264 34-52 (55)
305 3f6r_A Flavodoxin; FMN binding 48.6 84 0.0029 23.6 10.4 110 9-124 3-121 (148)
306 3pvc_A TRNA 5-methylaminomethy 47.7 16 0.00054 35.9 4.4 70 42-122 149-227 (689)
307 3tos_A CALS11; methyltransfera 47.6 14 0.00049 32.1 3.7 56 41-97 158-219 (257)
308 5nul_A Flavodoxin; electron tr 46.6 87 0.003 23.2 7.9 103 11-123 2-111 (138)
309 1e2b_A Enzyme IIB-cellobiose; 46.1 31 0.0011 25.5 4.9 54 9-67 5-58 (106)
310 3nbm_A PTS system, lactose-spe 44.8 93 0.0032 23.0 8.2 77 7-93 6-82 (108)
311 3rht_A (gatase1)-like protein; 44.3 45 0.0016 28.8 6.4 54 40-96 30-87 (259)
312 1f4p_A Flavodoxin; electron tr 43.5 1E+02 0.0034 23.1 10.8 109 8-124 1-120 (147)
313 3ny7_A YCHM protein, sulfate t 42.7 49 0.0017 24.4 5.7 51 62-123 49-101 (118)
314 2ark_A Flavodoxin; FMN, struct 41.2 1.3E+02 0.0044 23.7 8.7 110 9-124 6-124 (188)
315 3trk_A Nonstructural polyprote 41.1 15 0.00052 32.6 2.7 44 54-97 206-261 (324)
316 2l2q_A PTS system, cellobiose- 40.1 51 0.0018 24.2 5.3 57 8-69 5-61 (109)
317 1tvm_A PTS system, galactitol- 38.5 1.2E+02 0.004 22.4 8.0 57 9-69 23-79 (113)
318 3tka_A Ribosomal RNA small sub 38.1 24 0.00081 32.2 3.6 23 75-97 254-276 (347)
319 1wg8_A Predicted S-adenosylmet 37.7 17 0.00057 32.3 2.5 23 75-97 213-235 (285)
320 2a5l_A Trp repressor binding p 36.9 1.5E+02 0.0052 23.2 11.5 109 9-124 7-144 (200)
321 2l55_A SILB,silver efflux prot 35.1 22 0.00074 25.4 2.3 13 256-268 45-57 (82)
322 1ydg_A Trp repressor binding p 34.7 1.5E+02 0.0051 23.6 7.9 30 5-34 4-33 (211)
323 3u28_C H/ACA ribonucleoprotein 34.3 16 0.00056 27.9 1.6 21 252-272 84-106 (114)
324 2zki_A 199AA long hypothetical 34.2 85 0.0029 24.8 6.2 26 8-34 5-30 (199)
325 4gua_A Non-structural polyprot 32.8 33 0.0011 33.6 3.8 41 57-97 219-271 (670)
326 3hly_A Flavodoxin-like domain; 32.1 1.7E+02 0.0059 22.5 9.9 107 8-124 1-114 (161)
327 1m6y_A S-adenosyl-methyltransf 31.2 30 0.001 30.5 3.1 23 75-97 225-247 (301)
328 3two_A Mannitol dehydrogenase; 29.9 1.9E+02 0.0064 25.2 8.3 33 59-96 234-266 (348)
329 1gl0_I Protease inhibitor LCMI 29.6 13 0.00044 22.3 0.3 18 195-212 2-20 (35)
330 3fni_A Putative diflavin flavo 29.5 1.9E+02 0.0067 22.2 10.7 109 5-124 2-119 (159)
331 1rjd_A PPM1P, carboxy methyl t 29.4 1.7E+02 0.0057 26.0 7.8 56 41-97 167-234 (334)
332 4fib_A Uncharacterized protein 27.6 32 0.0011 26.7 2.2 17 255-271 61-77 (129)
333 1ykg_A SIR-FP, sulfite reducta 27.0 2.2E+02 0.0074 22.0 8.4 110 8-123 10-128 (167)
334 1wc2_A Endoglucanase; hydrolas 26.3 22 0.00075 29.3 1.2 31 235-271 67-101 (181)
335 2uyo_A Hypothetical protein ML 25.6 3E+02 0.01 24.0 8.8 72 26-98 134-221 (310)
336 1obo_A Flavodoxin; electron tr 25.3 2.3E+02 0.0077 21.6 10.4 110 8-125 2-119 (169)
337 1e5d_A Rubredoxin\:oxygen oxid 24.2 2.3E+02 0.0079 24.9 7.9 107 7-124 252-368 (402)
338 2xtt_A Protease inhibitor SGPI 23.7 16 0.00054 22.1 -0.1 17 196-212 3-20 (36)
339 3gj3_B Nuclear pore complex pr 23.3 39 0.0013 19.8 1.6 18 234-251 7-27 (33)
340 1pqw_A Polyketide synthase; ro 23.2 55 0.0019 26.0 3.1 32 58-95 106-137 (198)
341 1ag9_A Flavodoxin; electron tr 22.3 1.5E+02 0.005 23.2 5.5 111 8-126 1-119 (175)
342 2k02_A Ferrous iron transport 22.3 37 0.0013 24.4 1.7 11 234-244 58-68 (87)
343 1wg8_A Predicted S-adenosylmet 22.0 1.2E+02 0.0041 26.7 5.2 60 4-66 20-96 (285)
344 1twf_L ABC10-alpha, DNA-direct 21.4 1.1E+02 0.0037 21.1 3.9 34 233-266 27-66 (70)
345 2jw6_A Deformed epidermal auto 21.4 44 0.0015 21.0 1.7 20 233-252 8-27 (52)
346 1sqs_A Conserved hypothetical 21.3 3.4E+02 0.012 22.2 8.2 61 59-124 79-150 (242)
347 1ic9_A TH10AOX; three stranded 21.0 47 0.0016 18.4 1.5 13 245-258 11-23 (29)
348 3ufb_A Type I restriction-modi 21.0 2.8E+02 0.0096 26.2 8.1 75 45-121 284-386 (530)
349 3dmg_A Probable ribosomal RNA 20.8 71 0.0024 29.0 3.7 41 56-96 98-140 (381)
350 3g2e_A OORC subunit of 2-oxogl 20.5 1.4E+02 0.0049 24.2 5.2 32 58-96 69-100 (194)
351 2eqe_A Tumor necrosis factor, 20.5 38 0.0013 21.5 1.2 12 247-258 19-30 (48)
352 2e6z_A Transcription elongatio 20.3 65 0.0022 21.1 2.5 17 256-272 5-21 (59)
353 4dgh_A Sulfate permease family 20.2 1.4E+02 0.0048 22.0 4.8 50 62-122 52-104 (130)
No 1
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.75 E-value=4.9e-18 Score=141.43 Aligned_cols=146 Identities=22% Similarity=0.314 Sum_probs=109.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCC---CCCceeEEEeccccccC-Ch-HHHH
Q 023870 4 GKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV---ESFSIDTVLSISSSHEL-PG-DQLL 78 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~---~~~sfD~V~s~~~l~~~-~~-~~~l 78 (276)
++.|++||+++.+.+. -++.+.|++.|+++... .+.+.+++++++++ ++++||+|++.+++||+ ++ ..++
T Consensus 10 ~~~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l 84 (176)
T 2ld4_A 10 ISAGQFVAVVWDKSSP--VEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEIL 84 (176)
T ss_dssp CCTTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHH
T ss_pred CCCCCEEEEecCCcee--eeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHH
Confidence 7889999999999864 67999999999887532 37899999999988 89999999999999999 66 9999
Q ss_pred HHHHHhccCCcEEEEEecCCCCch--hHHHHHHHHHHHHHHCCCcchhhhhcccccC--------------CceeEEEEe
Q 023870 79 EEISRVLKPGGTILIYKKLTSDKG--DVDKAISALEGKLLLAGFLDAQRIQLKSVVP--------------AEVVSFGVK 142 (276)
Q Consensus 79 ~ei~rvLKPgG~l~i~~~~~~~~~--~~~~~~~~l~~~l~laGF~~v~~~~~~~~~~--------------~~~~~~~i~ 142 (276)
++++|+|||||+|++..+...... ......+.+...|..+||+.+......+..+ +.+..+.+.
T Consensus 85 ~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGfi~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 164 (176)
T 2ld4_A 85 AEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 164 (176)
T ss_dssp HHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTCEEEEEEEEECCCHHHHHHHHHHTCCCCSSEEEEEEE
T ss_pred HHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCCcEeecCcccCCCHHHHHHHHHHhcccCCceEEEEEe
Confidence 999999999999999765321100 0001124677789999994433221111111 123467889
Q ss_pred eccCCCCcCCcc
Q 023870 143 GKKPTWKIGSSF 154 (276)
Q Consensus 143 akKP~~~~g~~~ 154 (276)
++||+|++|||+
T Consensus 165 a~Kp~~~~gs~~ 176 (176)
T 2ld4_A 165 GKKPNFEVGSSR 176 (176)
T ss_dssp EECCCSSCCSCC
T ss_pred ccCCcccccCCC
Confidence 999999999984
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.37 E-value=5.7e-12 Score=112.41 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=77.8
Q ss_pred CCCCCCcEEEEccCCCCcHH----------------HHHHHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEE
Q 023870 3 TGKMQSAVLALSEDKILPVS----------------AVLNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVL 64 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~----------------~v~~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~ 64 (276)
.+++|.+||.++.|.+.-.. ++.+.|+++|++++...+ .++.++++|+.++|++ .||+|+
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~ 144 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVV 144 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccce
Confidence 36899999999999874321 233899999999876654 3589999999999875 599999
Q ss_pred eccccccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 023870 65 SISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 65 s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+++++|++++ ..+|++++|+|||||+|++.+...
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 9999999985 468999999999999999998654
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.24 E-value=5.1e-11 Score=104.55 Aligned_cols=94 Identities=21% Similarity=0.255 Sum_probs=78.6
Q ss_pred CCCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||+|+.|.+.-...+ .+.|++.|+++....+. ++.++++|++++|+++++||+|++..++|
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 467899999999986543333 27888988887765553 58999999999999999999999999999
Q ss_pred cCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|+++ ..+|++++|+|||||+|++.++.
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 9998 89999999999999999998754
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.23 E-value=7.2e-11 Score=100.54 Aligned_cols=138 Identities=18% Similarity=0.145 Sum_probs=102.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
++.+.+||.++.|.+.-+..+. +.|++.++++....+. ++.+..+++..+++++++||+|++..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 4678899999998875533222 7778888877665554 58999999999999999999999999
Q ss_pred ccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc---hhH--HHHHHHHHHHHHHCCCcchhhhhcccccCCceeEEEE
Q 023870 68 SSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDK---GDV--DKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGV 141 (276)
Q Consensus 68 ~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~---~~~--~~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i 141 (276)
+++++++ ..++++++|+|||||++++.++..... ... .-..+.+...+..+||..++.....+ ..+.+
T Consensus 115 ~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~------~~~~~ 188 (219)
T 3dh0_A 115 TFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK------YCFGV 188 (219)
T ss_dssp CGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT------TEEEE
T ss_pred hhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC------ceEEE
Confidence 9999987 899999999999999999998764311 000 00124677789999999776544322 23455
Q ss_pred eeccCC
Q 023870 142 KGKKPT 147 (276)
Q Consensus 142 ~akKP~ 147 (276)
.++||.
T Consensus 189 ~~~k~~ 194 (219)
T 3dh0_A 189 YAMIVK 194 (219)
T ss_dssp EEECC-
T ss_pred EEEecc
Confidence 666654
No 5
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.20 E-value=2.6e-10 Score=98.22 Aligned_cols=93 Identities=16% Similarity=0.195 Sum_probs=77.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
...+.+||.++.|.+.-...+. +.|++.|+++....+ ++.++++|+..++++ ++||+|++..++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDFE-EKYDMVVSALSI 119 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCCC-SCEEEEEEESCG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCCC-CCceEEEEeCcc
Confidence 4578999999999875433222 778888888765544 799999999999987 899999999999
Q ss_pred ccCChH---HHHHHHHHhccCCcEEEEEecCC
Q 023870 70 HELPGD---QLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 70 ~~~~~~---~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
|++++. .++++++|+|||||+|++.++..
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 999872 59999999999999999998654
No 6
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.19 E-value=1.1e-10 Score=101.72 Aligned_cols=121 Identities=14% Similarity=0.133 Sum_probs=91.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||+|+.|.+..+..+. +.|++.|++++...+. ++.++++|+.++++ +++||+|++..+
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 5788999999999875433222 7888888887766554 59999999999988 889999999999
Q ss_pred cccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc---hhHHH-----------HHHHHHHHHHHCCCcchhh
Q 023870 69 SHELPG-DQLLEEISRVLKPGGTILIYKKLTSDK---GDVDK-----------AISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 69 l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~---~~~~~-----------~~~~l~~~l~laGF~~v~~ 125 (276)
+|++++ ..+|++++|+|||||+|++.++..... ..+.. ....+...+..+||..++.
T Consensus 113 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 113 TWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp GGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred hHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEE
Confidence 999987 899999999999999999987532110 11110 1235667788899987543
No 7
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.18 E-value=5.6e-11 Score=105.82 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=76.0
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
..+.+||+|+.|.+.-...+. +.|++.|++ ..++.+++++++++|+++++||+|++..++||+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~-----~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALR-----HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF 112 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCC-----CTTEEEEECCTTCCCCCSSCEEEEEECSCCTTC
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhh-----cCCceeehhhhhhhcccCCcccEEEEeeehhHh
Confidence 456789999999886554443 777776644 257999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhccCCcEEEEEecCCC
Q 023870 73 PGDQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 73 ~~~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
+.+.++++++|+|||||+|++..+...
T Consensus 113 ~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 113 DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 888999999999999999999887643
No 8
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.16 E-value=3.6e-10 Score=95.44 Aligned_cols=121 Identities=15% Similarity=0.216 Sum_probs=91.9
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+.+ +||.++.|.+..+..+. +.|++.|+++....+. ++.++++++.++++++++||+|++..++
T Consensus 43 ~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 43 TAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSV 121 (219)
T ss_dssp CEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCG
T ss_pred CCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchH
Confidence 345 89999998875433222 7788888887766553 5899999999999999999999999999
Q ss_pred ccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc--hhH--------------------HHHHHHHHHHHHHCCCcchhhh
Q 023870 70 HELPG-DQLLEEISRVLKPGGTILIYKKLTSDK--GDV--------------------DKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 70 ~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~--~~~--------------------~~~~~~l~~~l~laGF~~v~~~ 126 (276)
||+++ ..++++++|+|||||++++.+...... ..+ ....+.+...+..+||..++..
T Consensus 122 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 122 FFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 99987 899999999999999999987543210 000 0012466778999999877654
No 9
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.16 E-value=4.5e-10 Score=97.88 Aligned_cols=123 Identities=15% Similarity=0.147 Sum_probs=93.9
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCC--eEEEeccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQ--IITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~--v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.++.|.+||.++.|.+..+..+. +.|++.|+++....+.. +.++++|+..+|+++++||+|++..
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 35788999999999875533332 77888888877665543 8999999999999999999999999
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecC--CC-CchhHHHHH----------HHHHHHHHHCCCcchhh
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKL--TS-DKGDVDKAI----------SALEGKLLLAGFLDAQR 125 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~--~~-~~~~~~~~~----------~~l~~~l~laGF~~v~~ 125 (276)
++|++....++++++|+|||||+|++.++. .. ........| ..+...+..+||..+..
T Consensus 123 ~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 123 AIYNIGFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 999995589999999999999999999853 11 111122222 35567788889887653
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.15 E-value=1.7e-10 Score=100.62 Aligned_cols=121 Identities=19% Similarity=0.226 Sum_probs=92.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.|.+||.++.|.+..+..+. +.|++.|+++.... .++.++++|+..+|+++++||+|++..++|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEEEEeHHHHHH
Confidence 5678899999999875433222 67788887765444 578999999999999999999999999999
Q ss_pred cC--Ch-HHHHHHHHHhccCCcEEEEEecCCCCchh----HHH----------HHHHHHHHHHHCCCcchhh
Q 023870 71 EL--PG-DQLLEEISRVLKPGGTILIYKKLTSDKGD----VDK----------AISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 71 ~~--~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~----~~~----------~~~~l~~~l~laGF~~v~~ 125 (276)
|+ .+ ..++++++|+|||||++++.++....... +.. ..+.+...+..+||..++.
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 99 55 88999999999999999999865432111 111 1245667788899976543
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.14 E-value=4.1e-10 Score=99.20 Aligned_cols=122 Identities=15% Similarity=0.155 Sum_probs=94.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||.|+.|.+..+..+. +.|++.|+++....+. ++.++++|+.++|+++++||+|++..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 5789999999999875433332 7888888887766654 499999999999999999999999999
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEEecCC--C-CchhHHHHH----------HHHHHHHHHCCCcchhh
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIYKKLT--S-DKGDVDKAI----------SALEGKLLLAGFLDAQR 125 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~--~-~~~~~~~~~----------~~l~~~l~laGF~~v~~ 125 (276)
++++....++++++|+|||||++++.+... . ........| ..+...+..+||..++.
T Consensus 124 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 124 IYNIGFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp GGGTCHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred ceecCHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 999955899999999999999999988541 1 111222222 35667788899987644
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.14 E-value=3.3e-10 Score=98.44 Aligned_cols=96 Identities=17% Similarity=0.261 Sum_probs=79.6
Q ss_pred CCCCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCC-CCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCD-PQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~-~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
.++.+.+||.++.|.+.-...+ .+.|++.++++....+ .++.+++++++.+|+++++||+|++..++
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAA 97 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCG
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCch
Confidence 3578899999999986543322 2778888877765544 35899999999999999999999999999
Q ss_pred ccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 70 HELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 70 ~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
||+++ ..++++++|+|||||+|++.++..
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99988 899999999999999999987653
No 13
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.13 E-value=2e-10 Score=102.69 Aligned_cols=123 Identities=19% Similarity=0.220 Sum_probs=93.4
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.++.+.+||.|+.|.+..+..+. +.|++.|+++....+ .++.++.+++..+|+++++||+|++..
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 45788999999999875433332 678888887765544 358999999999999999999999999
Q ss_pred ccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc---hhHHH-----------HHHHHHHHHHHCCCcchhh
Q 023870 68 SSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDK---GDVDK-----------AISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 68 ~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~---~~~~~-----------~~~~l~~~l~laGF~~v~~ 125 (276)
+++|+++ ..++++++|+|||||+|++.++..... ..+.. ....+...+..+||..++.
T Consensus 159 ~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 159 AFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 9999988 899999999999999999998653211 11111 1234566788889986543
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.12 E-value=5.1e-10 Score=98.52 Aligned_cols=95 Identities=23% Similarity=0.338 Sum_probs=80.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||.|+.|.+..+..+. +.|++.++++....+. ++.++.+|+..+|+++++||+|++..+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 4688999999999875533332 6788888887766553 489999999999999999999999999
Q ss_pred cccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 SHELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++|+++ ..++++++|+|||||++++.++..
T Consensus 139 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 139 LHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp TTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred hhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 999987 899999999999999999998653
No 15
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.10 E-value=8.1e-10 Score=94.39 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=79.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC------CeEEEeccCCCCCCCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP------QIITQASSLSQLPVESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~------~v~~~~~d~~~lp~~~~sfD~V~s 65 (276)
++.+.+||.++.|.+.-+..+. +.|++.++++....+. ++.+..+++..+++++++||+|++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 5788999999999875433332 7788888887665554 578999999999999999999999
Q ss_pred ccccccCCh-H---HHHHHHHHhccCCcEEEEEecCC
Q 023870 66 ISSSHELPG-D---QLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 66 ~~~l~~~~~-~---~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
..+++++++ . .++++++|+|||||+|++.++..
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 999999976 4 89999999999999999998754
No 16
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.10 E-value=9.3e-10 Score=95.90 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=78.3
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
.++.+.+||.++.|.+.-...+. +.|++.++++......++.+++++++.+++++++||+|++..++|
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWH 115 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchh
Confidence 35778999999999876544333 788888888763334569999999999999999999999999999
Q ss_pred cCCh-HHHHHHHHHhccCCcEEEEE
Q 023870 71 ELPG-DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 71 ~~~~-~~~l~ei~rvLKPgG~l~i~ 94 (276)
|+++ ..++++++|+|||||+|++.
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9987 88999999999999999987
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.09 E-value=4e-10 Score=97.23 Aligned_cols=121 Identities=22% Similarity=0.175 Sum_probs=92.9
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.+.+||.++.|.+.-+..+. +.|++.++++. ...++.++++++.++++++++||+|++..++||
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 5688999999999875433332 77888877664 335689999999999999999999999999999
Q ss_pred CCh-HHHHHHHHHhccCCcEEEEEecCCCCchh---HH-----------HHHHHHHHHHHHCCCcchhhh
Q 023870 72 LPG-DQLLEEISRVLKPGGTILIYKKLTSDKGD---VD-----------KAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 72 ~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~---~~-----------~~~~~l~~~l~laGF~~v~~~ 126 (276)
+++ ..++++++|+|||||+|++.++....... .. -....+...+..+||..++..
T Consensus 129 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 987 89999999999999999999865431100 00 012366778899999876543
No 18
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.09 E-value=1.9e-10 Score=103.83 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=99.2
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCCC--eEEEeccCCCCCCCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDPQ--IITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~~--v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
++.+.+||.|+.|.+..+..+ .+.|++.|+++....+.. +.++++|+.+++++ ++||+|+++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 577889999998876433222 288899998887766554 89999999999988 999999999
Q ss_pred cccccCCh-H---HHHHHHHHhccCCcEEEEEecCCCCc----h-----hHH----------------------HHHHHH
Q 023870 67 SSSHELPG-D---QLLEEISRVLKPGGTILIYKKLTSDK----G-----DVD----------------------KAISAL 111 (276)
Q Consensus 67 ~~l~~~~~-~---~~l~ei~rvLKPgG~l~i~~~~~~~~----~-----~~~----------------------~~~~~l 111 (276)
.++||+++ . .++++++|+|||||+|++.++..... . ... ...+.+
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 99999876 3 37999999999999999998653210 0 000 013467
Q ss_pred HHHHHHCCCcchhhhhcccccCCceeEEEEeeccCC
Q 023870 112 EGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPT 147 (276)
Q Consensus 112 ~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~akKP~ 147 (276)
...+..+||..++...... . ....+.++||+
T Consensus 275 ~~~l~~aGF~~v~~~~~~~----~-~~~~v~a~Kpa 305 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDDRA----R-LFPTVIARKPA 305 (305)
T ss_dssp HHHHHHTTCEEEEEECCTT----S-SSCEEEEECCC
T ss_pred HHHHHHCCCEEEEEEcccC----c-eeeEEEEecCC
Confidence 7889999999766543111 1 12345677773
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.08 E-value=1.4e-09 Score=92.45 Aligned_cols=90 Identities=21% Similarity=0.304 Sum_probs=74.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
+.+.+||.++.|.+.-+..+. +.|++.++++.. .++.++.+++..++++ ++||+|++..++|++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCSEEEEESCGGGS
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeEEEEECcchhcC
Confidence 468899999999875443332 778888877653 4578999999999988 999999999999999
Q ss_pred Ch-HH--HHHHHHHhccCCcEEEEEecCC
Q 023870 73 PG-DQ--LLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 73 ~~-~~--~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++ .. ++++++|+|||||++++.++..
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 87 44 9999999999999999998653
No 20
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.08 E-value=6.5e-10 Score=90.99 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=86.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.+.+||.++.|.+.-+..+. +.|++.++++ ..++.+..++ +++++++||+|++..++++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK----FDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH----CTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 4677899999999876544333 7777877766 3468888888 7888999999999999999
Q ss_pred CCh-HHHHHHHHHhccCCcEEEEEecCCCCc--h---hHHHHHHHHHHHHHHCCCcchhhhhc
Q 023870 72 LPG-DQLLEEISRVLKPGGTILIYKKLTSDK--G---DVDKAISALEGKLLLAGFLDAQRIQL 128 (276)
Q Consensus 72 ~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~--~---~~~~~~~~l~~~l~laGF~~v~~~~~ 128 (276)
+++ ..++++++|+|||||++++.++..... . ...-..+.+...+. ||..++....
T Consensus 88 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 88 MDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred ccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 987 899999999999999999998764311 0 00001235555555 9998766543
No 21
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.08 E-value=6.2e-10 Score=104.01 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=93.5
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhC-----C----CCeEEEeccCCCC------
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQC-----D----PQIITQASSLSQL------ 53 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~-----~----~~v~~~~~d~~~l------ 53 (276)
+..|.+||.++.|.+..+..+ .+.|++.|++++... + .++.+++++++.+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 568899999999987532222 267888887765432 2 5799999999988
Q ss_pred CCCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc--hhH---HH----------HHHHHHHHHHH
Q 023870 54 PVESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDK--GDV---DK----------AISALEGKLLL 117 (276)
Q Consensus 54 p~~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~--~~~---~~----------~~~~l~~~l~l 117 (276)
++++++||+|+++.+++++++ ..+|++++|+|||||+|++.++..... ... .. .++.+...|..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 999999999999999999988 899999999999999999987653211 011 00 12567788999
Q ss_pred CCCcchhhh
Q 023870 118 AGFLDAQRI 126 (276)
Q Consensus 118 aGF~~v~~~ 126 (276)
+||..++..
T Consensus 241 aGF~~v~~~ 249 (383)
T 4fsd_A 241 AGFRDVRLV 249 (383)
T ss_dssp TTCCCEEEE
T ss_pred CCCceEEEE
Confidence 999876543
No 22
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.07 E-value=8.3e-10 Score=94.91 Aligned_cols=90 Identities=14% Similarity=0.074 Sum_probs=74.9
Q ss_pred CCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 5 KMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
..+.+||.|+.|.+.-+..+ .+.|++.|+++... ++.+++++++++ +++++||+|++..++||+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-QLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-CCSSCEEEEEEESCGGGC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-CcCCcccEEEEhhHHHhh
Confidence 46789999999886543333 27888888877533 689999999888 578899999999999999
Q ss_pred Ch-HHHHHHHH-HhccCCcEEEEEecCC
Q 023870 73 PG-DQLLEEIS-RVLKPGGTILIYKKLT 98 (276)
Q Consensus 73 ~~-~~~l~ei~-rvLKPgG~l~i~~~~~ 98 (276)
++ ..+|++++ |+|||||+|++.++..
T Consensus 117 ~~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 117 DDPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp SSHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 87 89999999 9999999999998764
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.07 E-value=4.3e-10 Score=98.04 Aligned_cols=89 Identities=16% Similarity=0.194 Sum_probs=75.2
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
.+.+||.++.|.+.-+..+. +.|++.|+++.. ..++.++++++..+++++++||+|++..+++++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 68899999999874433222 778888877654 456899999999999999999999999999999
Q ss_pred Ch-HHHHHHHHHhccCCcEEEEEec
Q 023870 73 PG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 73 ~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
++ ..++++++|+|||||+|++..+
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 87 8999999999999999999854
No 24
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.06 E-value=1.2e-09 Score=98.89 Aligned_cols=122 Identities=11% Similarity=0.100 Sum_probs=93.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||+++.|.+.-...+. +.|++.|++++...+. ++.++.+|+.++|+++++||+|++..+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 5788999999999875432222 7788888887776654 499999999999999999999999999
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEEecCCCCch----h----HHH-------HHHHHHHHHHHCCCcchhh
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKG----D----VDK-------AISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~----~----~~~-------~~~~l~~~l~laGF~~v~~ 125 (276)
+++++...++++++|+|||||+|++.++...... . +.. ..+.+...+..+||..++.
T Consensus 195 l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 195 TMYVDLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp GGGSCHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred hhhCCHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 9999658999999999999999999986543211 1 111 1245667788888876543
No 25
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.05 E-value=7.4e-10 Score=93.94 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=97.7
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
.++.+.+||.++.|.+.-+..+. +.|++.++++. .+.+..+++..++ ++++||+|++..+++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 113 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDAYDAVWAHACLL 113 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSCEEEEEECSCGG
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCcEEEEEecCchh
Confidence 46778999999999875433332 77888887764 4567789999988 789999999999999
Q ss_pred cCC--h-HHHHHHHHHhccCCcEEEEEecCCCCch--hH-----HHHHHHHHHHHHHCC-CcchhhhhcccccCCc--ee
Q 023870 71 ELP--G-DQLLEEISRVLKPGGTILIYKKLTSDKG--DV-----DKAISALEGKLLLAG-FLDAQRIQLKSVVPAE--VV 137 (276)
Q Consensus 71 ~~~--~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~--~~-----~~~~~~l~~~l~laG-F~~v~~~~~~~~~~~~--~~ 137 (276)
+++ + ..++++++|+|||||+|++..+...... .. .-..+.+...+..+| |..++........+.. ..
T Consensus 114 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~~~~~ 193 (211)
T 3e23_A 114 HVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQELAQ 193 (211)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTSCEEE
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCCCCce
Confidence 998 4 7899999999999999999876532110 00 001246777899999 9977654322211111 13
Q ss_pred EEEEeeccCCCC
Q 023870 138 SFGVKGKKPTWK 149 (276)
Q Consensus 138 ~~~i~akKP~~~ 149 (276)
.+.+..++|+++
T Consensus 194 wl~~~~~~~~~~ 205 (211)
T 3e23_A 194 FLHVSVRKPELE 205 (211)
T ss_dssp EEEEEEECCCC-
T ss_pred EEEEEEecCccc
Confidence 445566666554
No 26
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.05 E-value=8.5e-10 Score=97.39 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=79.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||.|+.|.+.-...+. +.|++.++++....+. ++.+..+|+..+++++++||+|++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 5788999999998875433222 6778888877766554 589999999999999999999999999
Q ss_pred cccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 69 SHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 69 l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++++++ ..++++++|+|||||+|++.++.
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 999987 89999999999999999998854
No 27
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.04 E-value=9.5e-10 Score=92.59 Aligned_cols=117 Identities=13% Similarity=0.123 Sum_probs=90.3
Q ss_pred CCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC-
Q 023870 7 QSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP- 73 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~- 73 (276)
+.+||.++.|.+.-+..+. +.|++.++++. .++.++++++.++++++++||+|++..+++|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 117 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTH----PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGP 117 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHC----TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCT
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----CCCeEEeCcccccccCCCCeEEEEehhhHhcCCH
Confidence 7899999999875433332 77888877762 468899999999999999999999999999986
Q ss_pred -h-HHHHHHHHHhccCCcEEEEEecCCCCchhH--------HHHHHHHHHHHHHCCCcchhhhh
Q 023870 74 -G-DQLLEEISRVLKPGGTILIYKKLTSDKGDV--------DKAISALEGKLLLAGFLDAQRIQ 127 (276)
Q Consensus 74 -~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~--------~~~~~~l~~~l~laGF~~v~~~~ 127 (276)
+ ..++++++|+|||||+|++..+.......+ ....+.+...+..+||..++...
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 118 GELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp TTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 4 889999999999999999998764321100 00124677789999999776543
No 28
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.03 E-value=2e-09 Score=92.54 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=75.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecc-cccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~-~l~~ 71 (276)
..+.+||.++.|.+.-+..+. +.|++.++++....+.++.++++++..++++ ++||+|++.. ++||
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNY 114 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccc
Confidence 367899999998876544332 7888888887766666789999999999887 8999999998 9999
Q ss_pred C---Ch-HHHHHHHHHhccCCcEEEEEec
Q 023870 72 L---PG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 72 ~---~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+ .+ ..++++++|+|||||+|++..+
T Consensus 115 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8 34 7899999999999999998644
No 29
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.02 E-value=7.7e-10 Score=95.92 Aligned_cols=117 Identities=15% Similarity=-0.002 Sum_probs=87.4
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCC--CCCCCceeEEEeccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLSISS 68 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~l--p~~~~sfD~V~s~~~ 68 (276)
.++.+.+||.|+.|.+.-+..+. +.|++.++++ +.++.+++.++ ++++++||+|++..+
T Consensus 38 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~ 110 (240)
T 3dli_A 38 YFKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHF 110 (240)
T ss_dssp GTTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESC
T ss_pred hhcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCc
Confidence 35788999999999875433332 5566665543 67888888775 889999999999999
Q ss_pred cccCCh---HHHHHHHHHhccCCcEEEEEecCCCCchhHHH-----------HHHHHHHHHHHCCCcchhhh
Q 023870 69 SHELPG---DQLLEEISRVLKPGGTILIYKKLTSDKGDVDK-----------AISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 69 l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~-----------~~~~l~~~l~laGF~~v~~~ 126 (276)
++|+++ ..++++++|+|||||+|++..+.......+.. ..+.+...+..+||..+...
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 999983 78999999999999999999887543221111 12466777888999866544
No 30
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.01 E-value=1.7e-09 Score=95.90 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=76.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.+.+||.|+.|.+.-...+. +.|++.++++. .++.+.++|++.+|+ +++||+|++..++||
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLDAVFSNAMLHW 129 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEEEEEEESCGGG
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcCEEEEcchhhh
Confidence 4578899999999875433332 67888887764 457889999999998 579999999999999
Q ss_pred CCh-HHHHHHHHHhccCCcEEEEEecCCCC
Q 023870 72 LPG-DQLLEEISRVLKPGGTILIYKKLTSD 100 (276)
Q Consensus 72 ~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~ 100 (276)
+++ ..++++++|+|||||+|++..+....
T Consensus 130 ~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~ 159 (279)
T 3ccf_A 130 VKEPEAAIASIHQALKSGGRFVAEFGGKGN 159 (279)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECTTT
T ss_pred CcCHHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 988 88999999999999999998876543
No 31
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.00 E-value=7.1e-10 Score=96.83 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=86.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCC--CCCCCceeEEEe----
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLS---- 65 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~l--p~~~~sfD~V~s---- 65 (276)
..|.+||.|+.|.+..+..+. +.|+++|+++....+..+.++.++++.+ ++++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 678999999999986544333 8899999998887777888888888654 688999999974
Q ss_pred -ccccccCCh-HHHHHHHHHhccCCcEEEEEecCC------CCchhHHH-HHHHHHHHHHHCCCcchh
Q 023870 66 -ISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT------SDKGDVDK-AISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 66 -~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~------~~~~~~~~-~~~~l~~~l~laGF~~v~ 124 (276)
...++++++ ..++++++|+|||||+|++.+... ........ ..+.....|..+||....
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 334556666 889999999999999998875321 00011111 122445668889998654
No 32
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.00 E-value=6.6e-10 Score=94.72 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=72.9
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhh-------------CCCCeEEEeccCCCCCCCC-
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQ-------------CDPQIITQASSLSQLPVES- 57 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~-------------~~~~v~~~~~d~~~lp~~~- 57 (276)
++.|.+||+++.|.+..+..+. +.|++.|+++... ...++.++++|+.++++++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4678999999999876544332 8899998877542 1356899999999999876
Q ss_pred CceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEE
Q 023870 58 FSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~ 94 (276)
++||+|++..++|+++. ..++++++|+|||||++++.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 89999999888998875 56899999999999994443
No 33
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.99 E-value=2.7e-09 Score=95.23 Aligned_cols=93 Identities=8% Similarity=0.036 Sum_probs=78.7
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||.|+.|.+.-+..+ .+.|++.|+++....+.++.+.++|+.+++++ ++||+|++..+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 98 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAF 98 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESC
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECCh
Confidence 567899999999886443222 27788888887766666899999999999984 69999999999
Q ss_pred cccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 69 SHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 69 l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++++++ ..++++++|+|||||+|++.++.
T Consensus 99 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999988 89999999999999999999876
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.98 E-value=6.9e-10 Score=96.38 Aligned_cols=121 Identities=9% Similarity=0.074 Sum_probs=90.2
Q ss_pred CCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 5 KMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
+.+.+||.|+.|.+.-+..+ .+.|++.|+++.... .++.++++++..+++++++||+|++..++||
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 46889999999886543222 267888888776443 4688999999999999999999999999999
Q ss_pred CCh---HHHHHHHHHhccCCcEEEEEecCCCCc--------hhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 72 LPG---DQLLEEISRVLKPGGTILIYKKLTSDK--------GDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 72 ~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~--------~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+++ ..++++++|+|||||+|++.++..... .......+.+...+..+||..++..
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 953 789999999999999999998632100 0000112467777899999876543
No 35
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.95 E-value=2.7e-09 Score=89.89 Aligned_cols=95 Identities=22% Similarity=0.300 Sum_probs=78.1
Q ss_pred CCCCCcEEEEccCCCCc-HHHH------------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILP-VSAV------------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~-~~~v------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
...+.+||.++.|.+.. ...+ .+.|++.|+++....+.++.++++|+.++++++++||+|++..+++
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 45688999999987754 2222 1788888888776556678899999999999999999999998889
Q ss_pred cCC--h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 71 ELP--G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 71 ~~~--~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
|++ + ..++++++|+|||||++++.++..
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 884 4 889999999999999999988653
No 36
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.94 E-value=1.3e-08 Score=86.03 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=74.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.+.+||.++.|.+.-+..+. +.|++.+++. ...++.++++|+.++ +++++||+|++..++||
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~---~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRH---GLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGG---CCTTEEEEECCTTSC-CCSSCEEEEEEESCGGG
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhc---CCCCeEEEecccccC-CCCCceeEEEEechhhc
Confidence 5678899999999875433332 6777777661 225689999999988 88999999999999999
Q ss_pred CCh---HHHHHHHHHhccCCcEEEEEecCC
Q 023870 72 LPG---DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 72 ~~~---~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+++ ..++++++|+|||||+|++.++..
T Consensus 120 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 987 789999999999999999998754
No 37
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.94 E-value=3e-09 Score=94.48 Aligned_cols=92 Identities=14% Similarity=0.124 Sum_probs=77.3
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCC-CCCCceeEEEeccccc
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLP-VESFSIDTVLSISSSH 70 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp-~~~~sfD~V~s~~~l~ 70 (276)
.+.+||.|+.|.+.-+..+. +.|++.|+++....+. ++.++++++..++ +.+++||+|++..+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 46799999999875443332 7888888887766554 4899999999988 8899999999999999
Q ss_pred cCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|+++ ..++++++|+|||||+|++..+.
T Consensus 148 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 148 WVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 9988 89999999999999999998864
No 38
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.94 E-value=2.7e-09 Score=92.53 Aligned_cols=121 Identities=13% Similarity=0.084 Sum_probs=90.6
Q ss_pred CCCcEEEEccCCCCcHHH-------------HHHHHHHHHHHhhhhC-CCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 6 MQSAVLALSEDKILPVSA-------------VLNAIRDLGDEAVEQC-DPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~-------------v~~~m~~~A~~~~~~~-~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
.+.+||.|+.|.+.-+.. +.+.|++.|+++.... ..++.++.+++..+++++++||+|++..++++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 588999999888643322 1278888888876554 34588999999999998889999999999999
Q ss_pred CCh---HHHHHHHHHhccCCcEEEEEecCCCC-------chhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 72 LPG---DQLLEEISRVLKPGGTILIYKKLTSD-------KGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 72 ~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~-------~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+++ ..++++++|+|||||+|++.++.... ........+.+...+..+||..++..
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 986 37999999999999999998753211 00000023467778899999876644
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.91 E-value=2.1e-09 Score=92.49 Aligned_cols=90 Identities=16% Similarity=0.132 Sum_probs=73.9
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
..+.+||.++.|.+.-+..+. +.|++.++++... .++.++++++..+++++++||+|++..++|+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCCceEEEEeccccc
Confidence 368899999998864332222 6778878776533 3588999999999998999999999999999
Q ss_pred CCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 72 LPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 72 ~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+++ ..++++++++|||||+|++.++
T Consensus 120 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 120 VEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 987 8999999999999999999874
No 40
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.91 E-value=1.8e-08 Score=90.28 Aligned_cols=92 Identities=17% Similarity=0.219 Sum_probs=75.1
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC----CCeEEEeccCCCCCCCCCceeEEEe-ccc
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD----PQIITQASSLSQLPVESFSIDTVLS-ISS 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~----~~v~~~~~d~~~lp~~~~sfD~V~s-~~~ 68 (276)
.+.+||.|+.|.+.-+..+. +.|++.|+++....+ .++.++++|+.++++ +++||+|++ ...
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 34599999999876544333 889999988877665 569999999999998 789998885 466
Q ss_pred cccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 SHELPG---DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+|+++. ..+|++++|+|||||+|++..+..
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 777773 789999999999999999988764
No 41
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.90 E-value=1.1e-08 Score=87.59 Aligned_cols=114 Identities=14% Similarity=0.142 Sum_probs=87.0
Q ss_pred CCCcEEEEccCCCCcHHHH--------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HH
Q 023870 6 MQSAVLALSEDKILPVSAV--------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQ 76 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v--------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~~-~~ 76 (276)
++.+||.++.|.+..+..+ .+.|++.++++ ++.++.+++..+++++++||+|++..+++++++ ..
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPER 120 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHH
Confidence 3889999999987654433 27788877665 468889999999999999999999999999987 88
Q ss_pred HHHHHHHhccCCcEEEEEecCCCCchh-HH---------------HHHHHHHHHHHHCCCcchhh
Q 023870 77 LLEEISRVLKPGGTILIYKKLTSDKGD-VD---------------KAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 77 ~l~ei~rvLKPgG~l~i~~~~~~~~~~-~~---------------~~~~~l~~~l~laGF~~v~~ 125 (276)
++++++++|||||+|++.++....... .. -..+.+...+..+||..++.
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 999999999999999999875432100 00 01246667788888876543
No 42
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.89 E-value=9e-09 Score=91.36 Aligned_cols=92 Identities=12% Similarity=0.107 Sum_probs=75.3
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||.|+.|.+..+..+. +.|++.|+++....+. ++.+..+|+..+| ++||+|++..+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~ 138 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGA 138 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCc
Confidence 5678999999999875433333 6788888887765543 5889999998776 79999999999
Q ss_pred cccCC--h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 SHELP--G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~~~--~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++|++ + ..++++++|+|||||+|++.++..
T Consensus 139 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 139 FEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred hhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99984 4 889999999999999999988653
No 43
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.89 E-value=3.5e-09 Score=91.18 Aligned_cols=91 Identities=12% Similarity=0.179 Sum_probs=73.6
Q ss_pred CCCCCcEEEEccCCCCcHHHH-----------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecc-cccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV-----------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v-----------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~-~l~~ 71 (276)
++.+.+||.++.|.+.-+..+ .+.|++.|+++....+.++.++++++.+++++ ++||+|++.. +++|
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNY 109 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGG
T ss_pred cCCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhh
Confidence 567889999999886543322 27888888887766666789999999998876 8999999976 7888
Q ss_pred CC---h-HHHHHHHHHhccCCcEEEEEe
Q 023870 72 LP---G-DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 72 ~~---~-~~~l~ei~rvLKPgG~l~i~~ 95 (276)
+. + ..++++++++|||||+|++..
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 73 3 679999999999999999853
No 44
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=2.3e-09 Score=94.37 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=85.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
+.+.+||.|+.|.+.-...+. +.|++.++++ .++.++++|++++|+++++||+|++..++||+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 107 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVH-----PQVEWFTGYAENLALPDKSVDGVISILAIHHF 107 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCC-----TTEEEECCCTTSCCSCTTCBSEEEEESCGGGC
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhc-----cCCEEEECchhhCCCCCCCEeEEEEcchHhhc
Confidence 678999999999875433332 5566655443 27899999999999999999999999999999
Q ss_pred Ch-HHHHHHHHHhccCCcEEEEEecCCCCc-----hh-HHH----------HHHHHHHHHHHCCCcchhh
Q 023870 73 PG-DQLLEEISRVLKPGGTILIYKKLTSDK-----GD-VDK----------AISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 73 ~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~-----~~-~~~----------~~~~l~~~l~laGF~~v~~ 125 (276)
++ ..++++++|+|| ||++++.++..... .. +.. ....+. .|..+||..++.
T Consensus 108 ~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~ 175 (261)
T 3ege_A 108 SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEA 175 (261)
T ss_dssp SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEE
T ss_pred cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeE
Confidence 88 899999999999 99998888764211 01 010 123456 788899986654
No 45
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.88 E-value=2.1e-09 Score=95.07 Aligned_cols=122 Identities=16% Similarity=0.159 Sum_probs=82.8
Q ss_pred CCCCcEEEEccCCCCcH-------------HHHHHHHHHHHHHhhhhCC------------------------------C
Q 023870 5 KMQSAVLALSEDKILPV-------------SAVLNAIRDLGDEAVEQCD------------------------------P 41 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~-------------~~v~~~m~~~A~~~~~~~~------------------------------~ 41 (276)
..|.+||+|+.|.+.-. -++.+.|++.|++++.... .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 46788999998885321 1233788888776543211 1
Q ss_pred CeE-EEeccCCC-CCCC---CCceeEEEeccccccC----Ch-HHHHHHHHHhccCCcEEEEEecCCCCch---h-----
Q 023870 42 QII-TQASSLSQ-LPVE---SFSIDTVLSISSSHEL----PG-DQLLEEISRVLKPGGTILIYKKLTSDKG---D----- 103 (276)
Q Consensus 42 ~v~-~~~~d~~~-lp~~---~~sfD~V~s~~~l~~~----~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~---~----- 103 (276)
.+. ++++|+.. .|++ .++||+|++++++|++ ++ ..++++++|+|||||+|++......... .
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 233 78899887 3543 6799999999999885 23 6899999999999999999975432110 0
Q ss_pred HHHHHHHHHHHHHHCCCcchhhh
Q 023870 104 VDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 104 ~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
..-..+.+...|..+||..++..
T Consensus 214 ~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 214 VALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEe
Confidence 00012367778999999866543
No 46
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.88 E-value=7.1e-09 Score=91.77 Aligned_cols=91 Identities=12% Similarity=-0.018 Sum_probs=73.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhh------------------CCCCeEEEeccCCCCC
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQ------------------CDPQIITQASSLSQLP 54 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~------------------~~~~v~~~~~d~~~lp 54 (276)
+.+.+||+++.|.+..+..+. +.|++.|+++... .+.++.++++|+.+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 578899999999987644333 8889988765431 2356999999999999
Q ss_pred CCC-CceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEe
Q 023870 55 VES-FSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 55 ~~~-~sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~ 95 (276)
+++ ++||+|++..++++++. ..++++++|+|||||+|++.+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 875 89999999888888874 579999999999999997554
No 47
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.88 E-value=7.7e-09 Score=87.62 Aligned_cols=116 Identities=19% Similarity=0.149 Sum_probs=83.5
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCC---CCCCC-ceeEEEeccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQL---PVESF-SIDTVLSISS 68 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~l---p~~~~-sfD~V~s~~~ 68 (276)
..+.+||.++.|.+.-+..+. +.|++.++++ ..+.+..+++..+ ++..+ +||+|++..+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECch
Confidence 356899999999875443332 7788888766 4456777777766 65554 5999999999
Q ss_pred cccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchh-----------H-------------HHHHHHHHHHHHHCCCcch
Q 023870 69 SHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGD-----------V-------------DKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 69 l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~-----------~-------------~~~~~~l~~~l~laGF~~v 123 (276)
+| ..+ ..++++++|+|||||+|++.++....... + ....+.+...|..+||..+
T Consensus 126 l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 204 (227)
T 3e8s_A 126 LL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLV 204 (227)
T ss_dssp CC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEE
T ss_pred hh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEE
Confidence 88 555 89999999999999999999874321100 0 0023577788999999976
Q ss_pred hhh
Q 023870 124 QRI 126 (276)
Q Consensus 124 ~~~ 126 (276)
+..
T Consensus 205 ~~~ 207 (227)
T 3e8s_A 205 SLQ 207 (227)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 48
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.87 E-value=4.1e-09 Score=91.32 Aligned_cols=118 Identities=16% Similarity=0.158 Sum_probs=84.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCC--CCCCCceeEEEe-ccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQL--PVESFSIDTVLS-ISS 68 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~l--p~~~~sfD~V~s-~~~ 68 (276)
+.+.+||.|+.|.+.....+. +.|++.|+++....+.++.+++++++++ ++++++||+|++ .+.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 578899999999875543332 7899999888776667799999999988 899999999999 544
Q ss_pred c--ccCC--h-HHHHHHHHHhccCCcEEEEEecCCC------CchhHHHHH-HHHHHHHHHCCCcc
Q 023870 69 S--HELP--G-DQLLEEISRVLKPGGTILIYKKLTS------DKGDVDKAI-SALEGKLLLAGFLD 122 (276)
Q Consensus 69 l--~~~~--~-~~~l~ei~rvLKPgG~l~i~~~~~~------~~~~~~~~~-~~l~~~l~laGF~~ 122 (276)
+ +.++ . ..++++++|+|||||+|++.+.... ........+ +.....|..+||..
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 3 2222 2 4679999999999999998765310 001111111 23345688899985
No 49
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.87 E-value=1.8e-08 Score=89.33 Aligned_cols=94 Identities=18% Similarity=0.098 Sum_probs=76.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCC-CCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPV-ESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~-~~~sfD~V~s~~ 67 (276)
++.+.+||.++.|.+..+..+. +.|++.|+++....+. ++.++++|+..+++ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 4688999999999875433222 7788888887765543 48899999999998 688999999999
Q ss_pred cccc--CC--h-HHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHE--LP--G-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~--~~--~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++|+ .+ + ..++++++|+|||||+|++..+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 8887 22 3 78999999999999999998754
No 50
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=3.1e-08 Score=81.72 Aligned_cols=113 Identities=13% Similarity=0.036 Sum_probs=85.4
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEec-cccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSI-SSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~-~~l~ 70 (276)
++.+.+||.++.|.+.....+. +.|++.++++. .++.++.+++..+++++++||+|++. ..++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 119 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVMG 119 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCGG
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHHh
Confidence 5678999999998865433332 66777777654 34788999999999988999999998 6777
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhh
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
+++. ..++++++++|||||++++........ . ...+...+..+||..++.
T Consensus 120 ~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~-~----~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 120 FLAEDGREPALANIHRALGADGRAVIGFGAGRGW-V----FGDFLEVAERVGLELENA 172 (195)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSC-C----HHHHHHHHHHHTEEEEEE
T ss_pred hcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc-C----HHHHHHHHHHcCCEEeee
Confidence 7753 789999999999999999987653211 1 125667788899986544
No 51
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.85 E-value=1.3e-08 Score=89.13 Aligned_cols=87 Identities=11% Similarity=0.212 Sum_probs=71.3
Q ss_pred CCCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecc-ccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~-~l~ 70 (276)
++.+.+||.|+.|.+.-...+ .+.|++.|+++.. ++.++++|+.++++ +++||+|++.. +++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~ 122 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSL-GRRFSAVTCMFSSIG 122 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCC-SCCEEEEEECTTGGG
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCc-cCCcCEEEEcCchhh
Confidence 356789999999987543332 2788888877642 68899999999988 78999999997 999
Q ss_pred cCCh----HHHHHHHHHhccCCcEEEEEe
Q 023870 71 ELPG----DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 71 ~~~~----~~~l~ei~rvLKPgG~l~i~~ 95 (276)
|+++ ..++++++++|||||+|++..
T Consensus 123 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 123 HLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp GSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9863 678999999999999999964
No 52
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.85 E-value=2.5e-08 Score=89.43 Aligned_cols=93 Identities=8% Similarity=0.119 Sum_probs=76.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
+++|.+||.|+.|.+..+..+. +.|++.|+++....+. ++.++.+|+.++ +++||+|++..+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~ 146 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGA 146 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESC
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcch
Confidence 5789999999999875533332 7788888888776654 488999999876 789999999999
Q ss_pred cccCCh----------HHHHHHHHHhccCCcEEEEEecCCC
Q 023870 69 SHELPG----------DQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 69 l~~~~~----------~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
+||+++ ..++++++|+|||||+|++.++...
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 999943 6899999999999999999987643
No 53
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.85 E-value=9.2e-09 Score=92.17 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=76.9
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhC---CCCeEEEeccCCCCCCCC------Cce
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQC---DPQIITQASSLSQLPVES------FSI 60 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~---~~~v~~~~~d~~~lp~~~------~sf 60 (276)
+.+.+||.|+.|.+..+..+. +.|++.|+++.... ..++.+++++++++++++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 578899999999875543333 77888888877655 567999999999999888 899
Q ss_pred eEEEeccccccCChHHHHHHHHHhccCCcEEEEEec
Q 023870 61 DTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 61 D~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
|+|++..++||+....++++++|+|||||.|++..+
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999999339999999999999999998544
No 54
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.84 E-value=2.2e-08 Score=90.37 Aligned_cols=93 Identities=9% Similarity=0.125 Sum_probs=75.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||+|+.|.+..+..+. +.|++.|+++....+. .+.+..+|+.++| ++||+|++..+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~ 164 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEA 164 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeCh
Confidence 4678999999999875433222 6788888887766553 4889999998875 78999999999
Q ss_pred cccCC--h-HHHHHHHHHhccCCcEEEEEecCCC
Q 023870 69 SHELP--G-DQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 69 l~~~~--~-~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
+++++ + ..++++++|+|||||+|++.++...
T Consensus 165 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 165 FEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 99994 4 8899999999999999999987653
No 55
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.84 E-value=2.6e-08 Score=92.29 Aligned_cols=121 Identities=10% Similarity=0.037 Sum_probs=90.0
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC--CCCCCceeEEEecc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQL--PVESFSIDTVLSIS 67 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l--p~~~~sfD~V~s~~ 67 (276)
..+.+||+|+.|.+..+..+. +.|++.|+++....+. ++.++.+|+.+. |++ ++||+|++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 356789999999876544333 6788888887766553 599999999875 576 7899999999
Q ss_pred ccccCCh---HHHHHHHHHhccCCcEEEEEecCCCCchhHH----------------------HHHHHHHHHHHHCCCcc
Q 023870 68 SSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDKGDVD----------------------KAISALEGKLLLAGFLD 122 (276)
Q Consensus 68 ~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~----------------------~~~~~l~~~l~laGF~~ 122 (276)
.+|++++ ..+|++++|+|||||+|++.+.......... .+.+++...+..+||..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 9999986 4789999999999999999886532111000 01345667788889987
Q ss_pred hhhh
Q 023870 123 AQRI 126 (276)
Q Consensus 123 v~~~ 126 (276)
++..
T Consensus 337 v~~~ 340 (363)
T 3dp7_A 337 EEIQ 340 (363)
T ss_dssp SCCC
T ss_pred EEEE
Confidence 7654
No 56
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.84 E-value=8.5e-10 Score=98.87 Aligned_cols=94 Identities=13% Similarity=-0.014 Sum_probs=70.7
Q ss_pred CCCCcEEEEccCCCCcH--------------------HHHHHHHHHHHHHhhhhC-CC-C--eEEEeccCCCCC------
Q 023870 5 KMQSAVLALSEDKILPV--------------------SAVLNAIRDLGDEAVEQC-DP-Q--IITQASSLSQLP------ 54 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~--------------------~~v~~~m~~~A~~~~~~~-~~-~--v~~~~~d~~~lp------ 54 (276)
..+.+||.|+.|.+.-. -+..+.|++.|++++... +. + +.+..++++.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 46789999999887210 011267888888776542 22 2 445566666554
Q ss_pred CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 55 VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 55 ~~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+++++||+|++.+++||+++ ..+|++++|+|||||+|++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 67899999999999999998 889999999999999999987553
No 57
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.83 E-value=6.7e-09 Score=89.53 Aligned_cols=117 Identities=14% Similarity=0.103 Sum_probs=86.8
Q ss_pred CcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEeccccccCC
Q 023870 8 SAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~ 73 (276)
.+||.++.|.+..+..+ .+.|++.|+++....+ .++.++++|+.+++ ++.+||+|++..++++++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 146 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIE 146 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSC
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCC
Confidence 48999999887543322 2888888888765432 45899999999987 456999999999999998
Q ss_pred --h-HHHHHHHHHhccCCcEEEEEecCCCCc--h-hHHHHHHHHHHHHHHCCCcchhh
Q 023870 74 --G-DQLLEEISRVLKPGGTILIYKKLTSDK--G-DVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 74 --~-~~~l~ei~rvLKPgG~l~i~~~~~~~~--~-~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
+ ..++++++|+|||||+|++.++..... . ......+.+...+..+||..+..
T Consensus 147 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 147 PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 5 889999999999999999988754211 0 01011236677788999987654
No 58
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.82 E-value=2.9e-08 Score=84.48 Aligned_cols=92 Identities=14% Similarity=0.055 Sum_probs=74.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC------CeEEEeccCCCCCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP------QIITQASSLSQLPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~------~v~~~~~d~~~lp~~~~sfD~V~ 64 (276)
..+.+||.++.|.+.-+..+. +.|++.|+++....+. ++.++++|+..+++++++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 457899999998875433332 7888888877654332 68999999999998899999999
Q ss_pred eccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 023870 65 SISSSHELPG---DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 65 s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+..+++++++ ..++++++|+|||||.+++...
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 9999999985 4899999999999997776654
No 59
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.81 E-value=1.7e-08 Score=87.78 Aligned_cols=90 Identities=10% Similarity=0.049 Sum_probs=74.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
++.+.+||.++.|.+.-...+. +.|++.++++ ..++.++.+|++.++ ++++||+|++..++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l 105 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-PAQKADLLYANAVF 105 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC-CSSCEEEEEEESCG
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC-ccCCcCEEEEeCch
Confidence 4578899999998865433222 5677777665 246889999999998 78899999999999
Q ss_pred ccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 70 HELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 70 ~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
||+++ ..++++++|+|||||+|++.++..
T Consensus 106 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 106 QWVPDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp GGSTTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred hhCCCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 99987 899999999999999999998753
No 60
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.80 E-value=5.3e-09 Score=88.49 Aligned_cols=92 Identities=20% Similarity=0.214 Sum_probs=76.1
Q ss_pred CCCCCcEEEEccCCCCcHH----------HHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC
Q 023870 4 GKMQSAVLALSEDKILPVS----------AVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~----------~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~ 73 (276)
+..+.+||.++.|.+.... ++.+.|++.++++. .++.++++++.++|+++++||+|++..++||++
T Consensus 34 ~~~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 34 LPPGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCCCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred cCCCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 3478899999888753221 23377888887764 457889999999999999999999999999998
Q ss_pred h-HHHHHHHHHhccCCcEEEEEecCCC
Q 023870 74 G-DQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 74 ~-~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
+ ..++++++|+|||||++++.++...
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 7 8999999999999999999987653
No 61
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.79 E-value=2.3e-08 Score=83.23 Aligned_cols=91 Identities=19% Similarity=0.104 Sum_probs=74.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
..+.+||.++.|.+..+..+. +.|++.++++....+. ++.+..+|+.++++ +++||+|++..++|+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 467799999998865433332 7788888777655444 58999999999988 889999999999999
Q ss_pred CC--h-HHHHHHHHHhccCCcEEEEEec
Q 023870 72 LP--G-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 72 ~~--~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
++ + ..++++++|+|||||++++.++
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 87 4 7899999999999999888764
No 62
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.79 E-value=3.7e-08 Score=83.83 Aligned_cols=92 Identities=11% Similarity=0.054 Sum_probs=74.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC------CeEEEeccCCCCCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP------QIITQASSLSQLPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~------~v~~~~~d~~~lp~~~~sfD~V~ 64 (276)
..+.+||.++.|.+.-+..+. +.|++.|+++....+. ++.++++|+..++++.++||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 467899999998875433222 7888888887654443 68999999998888889999999
Q ss_pred eccccccCCh---HHHHHHHHHhccCCcEEEEEec
Q 023870 65 SISSSHELPG---DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 65 s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+..+++|+++ ..++++++|+|||||.|++...
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 9999999985 6899999999999998877654
No 63
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.79 E-value=2.3e-08 Score=85.04 Aligned_cols=94 Identities=22% Similarity=0.212 Sum_probs=75.8
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc--
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS-- 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l-- 69 (276)
++.+.+||.++.|.+.-...+. +.|++.|+++....+.++.++.+|+.++++++++||+|++..++
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 4568899999999875433222 77888888877666667899999999999988999999998884
Q ss_pred ccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 70 HELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 70 ~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++..+ ..++++++++|||||+|++.++.
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 44434 78999999999999999998764
No 64
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.78 E-value=1.3e-08 Score=92.52 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=71.8
Q ss_pred CCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC-------CeEEEeccC------CCC--CCC
Q 023870 5 KMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP-------QIITQASSL------SQL--PVE 56 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~-------~v~~~~~d~------~~l--p~~ 56 (276)
+.|.+||+|+.|.+..+..+ .+.|++.|+++....+. .+.|.++++ +++ +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 45889999999987543322 28899999888765443 256777877 333 367
Q ss_pred CCceeEEEeccccccC-C--h-HHHHHHHHHhccCCcEEEEEecC
Q 023870 57 SFSIDTVLSISSSHEL-P--G-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 57 ~~sfD~V~s~~~l~~~-~--~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+++||+|++.+++|++ + . ..++++++|+|||||+|++.++.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999998874 2 2 78999999999999999998865
No 65
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.78 E-value=1.7e-08 Score=87.96 Aligned_cols=122 Identities=15% Similarity=0.138 Sum_probs=84.5
Q ss_pred CCCCcEEEEccCCCCcHH-------------HHHHHHHHHHHHhhhhCCC------------------------------
Q 023870 5 KMQSAVLALSEDKILPVS-------------AVLNAIRDLGDEAVEQCDP------------------------------ 41 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~-------------~v~~~m~~~A~~~~~~~~~------------------------------ 41 (276)
..|.+||.++.|.+.... ++.+.|++.++++....+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 456789999888764321 2237888888776644321
Q ss_pred Ce-EEEeccCCCCC-CCC---CceeEEEeccccc----cCCh-HHHHHHHHHhccCCcEEEEEecCCCCc--------hh
Q 023870 42 QI-ITQASSLSQLP-VES---FSIDTVLSISSSH----ELPG-DQLLEEISRVLKPGGTILIYKKLTSDK--------GD 103 (276)
Q Consensus 42 ~v-~~~~~d~~~lp-~~~---~sfD~V~s~~~l~----~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~--------~~ 103 (276)
.+ .+.++++.+++ +++ ++||+|++..++| ++++ ..++++++|+|||||+|++.++..... ..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 16 88999998764 466 8999999999988 5445 789999999999999999987543210 00
Q ss_pred HHHHHHHHHHHHHHCCCcchhhh
Q 023870 104 VDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 104 ~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
..-..+.+...+..+||..++..
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEE
Confidence 00012366777899999876543
No 66
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.77 E-value=1.9e-08 Score=84.94 Aligned_cols=132 Identities=12% Similarity=0.004 Sum_probs=90.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCC-eEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQ-IITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~-v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
++.+.+||.++.|.+..+..+. +.|++.|+++....+.. +.+.++|+... .+++||+|++...+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcH
Confidence 5678999999999875433222 78888888877666554 88999998764 46899999998766
Q ss_pred ccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhhhcccccCCceeEEEEeeccCCCC
Q 023870 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQLKSVVPAEVVSFGVKGKKPTWK 149 (276)
Q Consensus 70 ~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~~~~~~~~~~~~~~~i~akKP~~~ 149 (276)
+++ ..++++++++|||||++++.++... . ...+...+..+||..+..... +.. ...+..++|..+
T Consensus 136 ~~~--~~~l~~~~~~L~~gG~l~~~~~~~~---~----~~~~~~~~~~~Gf~~~~~~~~-----~~w-~~~~~~~~~~~~ 200 (205)
T 3grz_A 136 EIL--LDLIPQLDSHLNEDGQVIFSGIDYL---Q----LPKIEQALAENSFQIDLKMRA-----GRW-IGLAISRKHEGH 200 (205)
T ss_dssp HHH--HHHGGGSGGGEEEEEEEEEEEEEGG---G----HHHHHHHHHHTTEEEEEEEEE-----TTE-EEEEEEECC---
T ss_pred HHH--HHHHHHHHHhcCCCCEEEEEecCcc---c----HHHHHHHHHHcCCceEEeecc-----CCE-EEEEEecccccc
Confidence 653 6789999999999999999876532 1 125667788999987654432 122 223566677666
Q ss_pred cCC
Q 023870 150 IGS 152 (276)
Q Consensus 150 ~g~ 152 (276)
.++
T Consensus 201 ~~~ 203 (205)
T 3grz_A 201 HHH 203 (205)
T ss_dssp ---
T ss_pred ccc
Confidence 554
No 67
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.77 E-value=2.5e-08 Score=84.61 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=74.7
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
..+.+||.++.|.+.-...+. +.|++.++++.... .++.++++|+.+++ ++++||+|++..++||+
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 127 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQFS-TAELFDLIVVAEVLYYL 127 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTCC-CSCCEEEEEEESCGGGS
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccC-CCeEEEEcchhhCC-CCCCccEEEEccHHHhC
Confidence 456789999999875433332 78888888876543 37899999999988 68899999999999999
Q ss_pred Ch----HHHHHHHHHhccCCcEEEEEecC
Q 023870 73 PG----DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 73 ~~----~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++ ..++++++|+|||||+|++.++.
T Consensus 128 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 128 EDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 85 46799999999999999998764
No 68
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.76 E-value=2.9e-08 Score=83.28 Aligned_cols=93 Identities=18% Similarity=0.173 Sum_probs=73.4
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.+ +||.++.|.+..+..+. +.|++.|+++....+.++.+.++|+..+++++++||+|++... |+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 105 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC-HL 105 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC-CC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh-cC
Confidence 5667 99999988865433322 7788888887766666889999999999999999999998542 33
Q ss_pred C-Ch-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 72 L-PG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 72 ~-~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
. .+ ..++++++++|||||+|++.++..
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2 23 789999999999999999998754
No 69
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.73 E-value=4.8e-08 Score=82.09 Aligned_cols=94 Identities=23% Similarity=0.291 Sum_probs=74.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||.++.|.+.-...+. +.|++.++++... ..++.+.++|+..+++++++||+|++..+++
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH-VPQLRWETMDVRKLDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT-CTTCEEEECCTTSCCSCSSCEEEEEEESHHH
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc-CCCcEEEEcchhcCCCCCCcccEEEECcchh
Confidence 4778999999998865433222 6778888776543 3468899999999999999999999977765
Q ss_pred cCC---------------h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 71 ELP---------------G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 71 ~~~---------------~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++. + ..++++++|+|||||++++.++..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 543 3 789999999999999999999863
No 70
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.73 E-value=7.9e-08 Score=81.47 Aligned_cols=87 Identities=17% Similarity=0.114 Sum_probs=69.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCC--CCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQ--LPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~--lp~~~~sfD~V~s~~~l~ 70 (276)
+.+.+||.++.|.+.....+. +.|++.++++. ..+..+++.. +++++++||+|++..+++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 478899999998865433332 56666666542 2678888876 678889999999999999
Q ss_pred cCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|+++ ..++++++++|||||++++..+.
T Consensus 105 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 105 HLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp GSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9987 88999999999999999998765
No 71
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.72 E-value=1.3e-07 Score=79.82 Aligned_cols=111 Identities=9% Similarity=0.024 Sum_probs=82.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||+++.|.+..+..+. +.|++.|++++...+. ++.++.+++........+||+|++...
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC
Confidence 5678999999999864422222 7788888887665553 588999999665444478999999876
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
.+ ....++++++++|||||+|++..... .....+...+..+|| +++
T Consensus 118 ~~--~~~~~l~~~~~~LkpgG~l~~~~~~~-------~~~~~~~~~l~~~g~-~~~ 163 (204)
T 3e05_A 118 GG--MLEEIIDAVDRRLKSEGVIVLNAVTL-------DTLTKAVEFLEDHGY-MVE 163 (204)
T ss_dssp TT--CHHHHHHHHHHHCCTTCEEEEEECBH-------HHHHHHHHHHHHTTC-EEE
T ss_pred Cc--CHHHHHHHHHHhcCCCeEEEEEeccc-------ccHHHHHHHHHHCCC-cee
Confidence 65 23789999999999999999987642 123356677889999 544
No 72
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.72 E-value=5.1e-08 Score=88.38 Aligned_cols=121 Identities=21% Similarity=0.179 Sum_probs=88.3
Q ss_pred CCCCcEEEEccCCCCcHHHHHH-------------HHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 5 KMQSAVLALSEDKILPVSAVLN-------------AIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~~-------------~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+.+.+||.++.|.+.-+..+.. .|++.|+++....+. ++.++.+|+.+.+++.+ ||+|++.+.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 5678999999988754333332 577778777655443 48999999988887765 9999999999
Q ss_pred ccCCh---HHHHHHHHHhccCCcEEEEEecCCCCc--hh-HHH----------------HHHHHHHHHHHCCCcchhhh
Q 023870 70 HELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GD-VDK----------------AISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 70 ~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~--~~-~~~----------------~~~~l~~~l~laGF~~v~~~ 126 (276)
|++++ ..++++++++|||||++++.++..... .. ... ..+.+...+..+||..++..
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 99964 689999999999999999998764311 00 000 12456667888899876543
No 73
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.72 E-value=2.1e-08 Score=91.07 Aligned_cols=90 Identities=8% Similarity=0.096 Sum_probs=71.4
Q ss_pred CCCCCCcEEEEccCCCC-cHH-------------HHHHHHHHHHHHhhhhCC-CCeEEEeccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKIL-PVS-------------AVLNAIRDLGDEAVEQCD-PQIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~-~~~-------------~v~~~m~~~A~~~~~~~~-~~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.+++|++||+|+.|.+. .+. ++.+.|+++|++++...+ .++.++++|+.++| +++||+|++..
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECC
Confidence 57899999999999742 111 122889999998876655 46999999998876 78999999754
Q ss_pred ccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
. .++ ..++++++|+|||||+|++.+..
T Consensus 197 ~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 197 L---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp T---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred C---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 3 355 78999999999999999998854
No 74
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.72 E-value=4.8e-08 Score=88.96 Aligned_cols=120 Identities=13% Similarity=0.141 Sum_probs=88.3
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+.+.+||+|+.|.+.-+..+. +.|++.|+++....+ .++.++.+|+. .+++. .||+|++.+++
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 245 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVL 245 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCG
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhh
Confidence 456789999999875543333 668888887766554 45999999997 46665 89999999999
Q ss_pred ccCCh---HHHHHHHHHhccCCcEEEEEecCCCCc-----hhHH---------HHHHHHHHHHHHCCCcchhhh
Q 023870 70 HELPG---DQLLEEISRVLKPGGTILIYKKLTSDK-----GDVD---------KAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 70 ~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~-----~~~~---------~~~~~l~~~l~laGF~~v~~~ 126 (276)
|++++ ..+|++++++|||||+|++.+...... .++. .+.+++...+..+||..++..
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 99987 689999999999999999998753211 0110 012456677888898876654
No 75
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.71 E-value=1.2e-07 Score=83.34 Aligned_cols=95 Identities=7% Similarity=-0.052 Sum_probs=73.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHHHH---------------------HHHHHHHhhhhCCC--CeEEEecc---CCCCCCCC
Q 023870 4 GKMQSAVLALSEDKILPVSAVLNA---------------------IRDLGDEAVEQCDP--QIITQASS---LSQLPVES 57 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~~~---------------------m~~~A~~~~~~~~~--~v~~~~~d---~~~lp~~~ 57 (276)
++.|.+||.|+.|.+.-+..+... |++.|+++....+. ++.++.+| ...+|+++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCC
Confidence 578999999999987554433322 67778777765543 58999998 56778889
Q ss_pred CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 58 FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++||+|++..++||+++ ..+++.+.++++|||++++.++..
T Consensus 121 ~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 99999999999999987 556666666666799999998764
No 76
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.71 E-value=1.9e-07 Score=79.93 Aligned_cols=114 Identities=16% Similarity=0.185 Sum_probs=82.7
Q ss_pred CCCCCCcEEEEccC-CCCcHHHH-------------HHHHHHHHHHhhhhCCCCeEEEeccCCCC-CCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSED-KILPVSAV-------------LNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~-~~~~~~~v-------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~l-p~~~~sfD~V~s~~ 67 (276)
.++.|.+||.++.| .+.....+ .+.|++.|++++...+.++.++++|+..+ ++++++||+|+++.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 45789999999999 65432211 17788888888777777889999997543 56678999999986
Q ss_pred ccccCCh--------------------HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 68 SSHELPG--------------------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 68 ~l~~~~~--------------------~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
.+++... ..++++++++|||||+|++..+.. . .....+...+..+||..
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~---~~~~~~~~~l~~~g~~~ 200 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK---E---KLLNVIKERGIKLGYSV 200 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC---H---HHHHHHHHHHHHTTCEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc---H---hHHHHHHHHHHHcCCce
Confidence 6554332 678999999999999999976542 1 11236667788899953
No 77
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.70 E-value=1.3e-07 Score=82.11 Aligned_cols=112 Identities=12% Similarity=0.042 Sum_probs=83.3
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCC---CCceeEEEec
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVE---SFSIDTVLSI 66 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~---~~sfD~V~s~ 66 (276)
+.+.+||+++.|.+.....+. +.|++.|++++...+. ++.++++++++++++ +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 578899999999986533222 7888888887766554 599999999888764 6799999986
Q ss_pred cccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhh
Q 023870 67 SSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
. +.+ ..++++++++|||||+|++..... . ......+...+..+||..++.
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~-~----~~~~~~~~~~l~~~g~~~~~~ 199 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVALKAAS-A----EEELNAGKKAITTLGGELENI 199 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEEECC--C----HHHHHHHHHHHHHTTEEEEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEEeCCC-c----hHHHHHHHHHHHHcCCeEeEE
Confidence 5 234 789999999999999999875331 1 112235666788899976543
No 78
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.70 E-value=1e-07 Score=83.72 Aligned_cols=124 Identities=13% Similarity=0.055 Sum_probs=85.3
Q ss_pred CCCCCcEEEEccCCCCc---HHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCC---CCCCCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILP---VSAVL------------NAIRDLGDEAVEQCDPQIITQASSLS---QLPVESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~---~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~---~lp~~~~sfD~V~s 65 (276)
+++|++||.++.|.+.- +..++ +.|++.+++++... .++..+.++.. ..++..+++|+|++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-RNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-TTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-cCeeEEEEeccCccccccccceEEEEEE
Confidence 78999999999999754 22232 78888887765443 45777777764 45677889999987
Q ss_pred ccccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc--hhHHHHHHHHHHHHHHCCCcchhhhhccc
Q 023870 66 ISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDK--GDVDKAISALEGKLLLAGFLDAQRIQLKS 130 (276)
Q Consensus 66 ~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~--~~~~~~~~~l~~~l~laGF~~v~~~~~~~ 130 (276)
.... ..+ ..++.+++|+|||||++++........ .+.....+.....|..+||..++.....|
T Consensus 154 d~~~--~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 154 DVAQ--PEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp CCCC--TTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred eccC--ChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 5432 234 789999999999999999876443110 11112233455678899998776654433
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.69 E-value=1.9e-08 Score=89.63 Aligned_cols=121 Identities=15% Similarity=0.185 Sum_probs=81.6
Q ss_pred CCCcEEEEccCCCCcHH-------------HHHHHHHHHHHHhhhhC-----------------C--------------C
Q 023870 6 MQSAVLALSEDKILPVS-------------AVLNAIRDLGDEAVEQC-----------------D--------------P 41 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~-------------~v~~~m~~~A~~~~~~~-----------------~--------------~ 41 (276)
.|.+||.|+.|.+.... ++.+.|++.|++++... + .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 57889999888764210 22378888877754321 1 0
Q ss_pred CeEEEeccCCC-CCC-----CCCceeEEEecccccc----CCh-HHHHHHHHHhccCCcEEEEEecCCCCch--------
Q 023870 42 QIITQASSLSQ-LPV-----ESFSIDTVLSISSSHE----LPG-DQLLEEISRVLKPGGTILIYKKLTSDKG-------- 102 (276)
Q Consensus 42 ~v~~~~~d~~~-lp~-----~~~sfD~V~s~~~l~~----~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~-------- 102 (276)
.+.++.+|+.+ +|+ ++++||+|++++++|| +++ ..+|++++|+|||||+|++.........
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 14567778887 664 4467999999999998 555 8899999999999999999753321100
Q ss_pred hHHHHHHHHHHHHHHCCCcchhhh
Q 023870 103 DVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 103 ~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
...-..+.+...|..+||..+...
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEEEee
Confidence 000012367778899999876543
No 80
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.69 E-value=6.2e-08 Score=88.74 Aligned_cols=133 Identities=18% Similarity=0.244 Sum_probs=93.2
Q ss_pred CCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCC-CCCCceeEEEeccccc
Q 023870 7 QSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLP-VESFSIDTVLSISSSH 70 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp-~~~~sfD~V~s~~~l~ 70 (276)
+.+||.|+.|.+.-+..+. +.|++.++++....+. ++.++.+|+...+ +....||+|++...+|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh 259 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLH 259 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccc
Confidence 7899999998875443333 4467777776655443 4999999998876 2456699999999999
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEecCCCCc--hhH-H----------------HHHHHHHHHHHHCCCcchhhhhc
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--GDV-D----------------KAISALEGKLLLAGFLDAQRIQL 128 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~--~~~-~----------------~~~~~l~~~l~laGF~~v~~~~~ 128 (276)
++++ ..+|++++++|||||+|++.+...... ... . ...+.+...+..+||..++.. .
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~-~ 338 (352)
T 3mcz_A 260 YFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS-I 338 (352)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE-E
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec-c
Confidence 9986 689999999999999999988643210 000 0 012456677899999877632 1
Q ss_pred ccccCCceeEEEEeeccCC
Q 023870 129 KSVVPAEVVSFGVKGKKPT 147 (276)
Q Consensus 129 ~~~~~~~~~~~~i~akKP~ 147 (276)
. ....+.++||+
T Consensus 339 -----g--~~~l~~a~kp~ 350 (352)
T 3mcz_A 339 -----G--RYTLLIGQRSS 350 (352)
T ss_dssp -----T--TEEEEEEECCC
T ss_pred -----C--ceEEEEEecCC
Confidence 1 12346778874
No 81
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.68 E-value=7.4e-08 Score=85.48 Aligned_cols=90 Identities=16% Similarity=0.079 Sum_probs=75.9
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~ 73 (276)
.+.+||.++.|.+..+..+. +.|++.|+++....+.++.++++|+.++++ +++||+|++..++||++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCC
Confidence 67899999999875433332 788888888877777789999999999887 88999999999999986
Q ss_pred h---HHHHHHHHHhccCCcEEEEEec
Q 023870 74 G---DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 74 ~---~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
. ..++++++++|||||.+++...
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4 5899999999999999877654
No 82
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.66 E-value=1.4e-07 Score=87.41 Aligned_cols=121 Identities=14% Similarity=0.193 Sum_probs=88.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||+|+.|.+.-+..+. +.|++.|+++....+ .++.++.+|+. .+++. .||+|++.++
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 3567889999998875443333 567888887766554 35999999998 56766 8999999999
Q ss_pred cccCChH---HHHHHHHHhccCCcEEEEEecCCCCch-h------HH---------HHHHHHHHHHHHCCCcchhhh
Q 023870 69 SHELPGD---QLLEEISRVLKPGGTILIYKKLTSDKG-D------VD---------KAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 69 l~~~~~~---~~l~ei~rvLKPgG~l~i~~~~~~~~~-~------~~---------~~~~~l~~~l~laGF~~v~~~ 126 (276)
+|++++. .+|++++++|||||+|++.+....... . +. .+.+++...+..+||..++..
T Consensus 278 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 278 LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 9999973 699999999999999999886543211 0 00 012355666788888876654
No 83
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.66 E-value=1.3e-07 Score=80.99 Aligned_cols=87 Identities=14% Similarity=0.205 Sum_probs=69.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEe-cccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLS-ISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s-~~~l~~ 71 (276)
..+.+||.++.|.+..+..+. +.|++.|+++. .++.++.+|+.++++ +++||+|++ ..+++|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC----TTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC----CCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 568899999999875433332 67788777663 357899999999887 789999996 447888
Q ss_pred CC---h-HHHHHHHHHhccCCcEEEEEec
Q 023870 72 LP---G-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 72 ~~---~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
++ + ..++++++++|||||+|++.++
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 74 2 6899999999999999999864
No 84
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.65 E-value=2.5e-07 Score=85.41 Aligned_cols=136 Identities=20% Similarity=0.222 Sum_probs=94.9
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCC-CCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCD-PQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~-~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
+...+|++|+.|.+.-+..+. +.+++.|+++..... .+|+++.+|+...|++ .+|+|+....+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh 255 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLH 255 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecc
Confidence 456789999999875544443 678888877665433 4599999999776655 579999999999
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEecCCCC--chhH-HH---------------HHHHHHHHHHHCCCcchhhhhcc
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYKKLTSD--KGDV-DK---------------AISALEGKLLLAGFLDAQRIQLK 129 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~--~~~~-~~---------------~~~~l~~~l~laGF~~v~~~~~~ 129 (276)
.|++ ..+|++++++|+|||+|+|.+..... ..+. .. +.+++...+..+||..++.....
T Consensus 256 ~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~ 335 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTG 335 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcC
Confidence 9987 46899999999999999999864321 1111 00 13456677999999987755321
Q ss_pred cccCCceeEEEEeeccCCC
Q 023870 130 SVVPAEVVSFGVKGKKPTW 148 (276)
Q Consensus 130 ~~~~~~~~~~~i~akKP~~ 148 (276)
+... .|.|+|.+.
T Consensus 336 -----~~~~-~i~ArKgt~ 348 (353)
T 4a6d_A 336 -----AIYD-AILARKGTH 348 (353)
T ss_dssp -----SSCE-EEEEECCCC
T ss_pred -----CceE-EEEEEecCc
Confidence 1122 367887654
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.63 E-value=3.5e-07 Score=77.85 Aligned_cols=112 Identities=15% Similarity=0.029 Sum_probs=82.5
Q ss_pred CCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCC--CCCCceeEEEeccc
Q 023870 6 MQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLP--VESFSIDTVLSISS 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp--~~~~sfD~V~s~~~ 68 (276)
.+..||.++.|.+.-+..+. +.|++.|++++...+. ++.++++|+..++ +++++||+|++++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 47889999999875432222 7788888887766554 6899999999887 88889999999876
Q ss_pred cccCC---------hHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 69 SHELP---------GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 69 l~~~~---------~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
..|.. ...++.+++++|||||.|++..... .. .+.+...+..+||..+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~~---~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR----GL---FEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH----HH---HHHHHHHHHHHTCEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH----HH---HHHHHHHHHHCCCeeee
Confidence 55432 1579999999999999999986431 11 23455567778987543
No 86
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.61 E-value=1.7e-08 Score=94.77 Aligned_cols=117 Identities=9% Similarity=0.139 Sum_probs=85.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCe---EEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQI---ITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v---~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||.|+.|.+.-+..+. +.|++.|+++ +... .+...+++.+++++++||+|++..+
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v 180 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANT 180 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECCh
Confidence 4578899999999876655443 6777777665 2221 1334566677888999999999999
Q ss_pred cccCCh-HHHHHHHHHhccCCcEEEEEecCCC--------------CchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 69 SHELPG-DQLLEEISRVLKPGGTILIYKKLTS--------------DKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 69 l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~--------------~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+||+++ ..++++++|+|||||+|++..+... +..-. ..+.+...+..+||..++..
T Consensus 181 l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 181 LCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLF--SATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp GGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEEC--CHHHHHHHHHHTTEEEEEEE
T ss_pred HHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcC--CHHHHHHHHHHcCCEEEEEE
Confidence 999988 8999999999999999999876410 00000 12367778999999876544
No 87
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.61 E-value=2.7e-07 Score=85.03 Aligned_cols=122 Identities=14% Similarity=0.132 Sum_probs=86.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||.|+.|.+.-+..+. +.|++.|+++....+. ++.++.+|+.+ +++. .||+|++..+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 4567899999998875433222 6788888887765554 59999999865 4544 3999999999
Q ss_pred cccCCh---HHHHHHHHHhccCCcEEEEEec--CC-CCch-hHHH---------------HHHHHHHHHHHCCCcchhhh
Q 023870 69 SHELPG---DQLLEEISRVLKPGGTILIYKK--LT-SDKG-DVDK---------------AISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 69 l~~~~~---~~~l~ei~rvLKPgG~l~i~~~--~~-~~~~-~~~~---------------~~~~l~~~l~laGF~~v~~~ 126 (276)
+|++++ ..++++++++|||||+|++.++ .. .... .... ..+.+...+..+||..++..
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 999987 3899999999999999999887 32 1100 0000 12355667888999876654
Q ss_pred h
Q 023870 127 Q 127 (276)
Q Consensus 127 ~ 127 (276)
.
T Consensus 338 ~ 338 (374)
T 1qzz_A 338 T 338 (374)
T ss_dssp E
T ss_pred E
Confidence 3
No 88
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.60 E-value=1.5e-07 Score=77.83 Aligned_cols=96 Identities=11% Similarity=0.001 Sum_probs=70.4
Q ss_pred CCCCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCC-CCeEEEeccCCCCC-CCCCceeEEEeccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCD-PQIITQASSLSQLP-VESFSIDTVLSISS 68 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~-~~v~~~~~d~~~lp-~~~~sfD~V~s~~~ 68 (276)
.++.|.+||+++.|.+.-...+ .+.|++.|+++....+ .++.+++++++.++ +.+++||+|++...
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 4678999999999987543322 2889999988876655 45888888887764 55789999987643
Q ss_pred c-cc-------CC-h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 S-HE-------LP-G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l-~~-------~~-~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
. ++ .+ . ..++++++|+|||||+|++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 2 21 11 2 578899999999999999988753
No 89
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.60 E-value=1.8e-07 Score=84.28 Aligned_cols=93 Identities=16% Similarity=0.030 Sum_probs=72.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhC--------CCCeEEEeccCCCCC----CC--C
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQC--------DPQIITQASSLSQLP----VE--S 57 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~--------~~~v~~~~~d~~~lp----~~--~ 57 (276)
+.+.+||.++.|.+.-+..+. +.|++.|+++.... ..++.++++|++.++ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 478899999998876543332 67888887765432 235889999999886 64 4
Q ss_pred CceeEEEeccccccC-C---h-HHHHHHHHHhccCCcEEEEEecC
Q 023870 58 FSIDTVLSISSSHEL-P---G-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~-~---~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++||+|++..++||+ . + ..++++++|+|||||.|++..+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999999999997 3 2 68999999999999999999876
No 90
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.60 E-value=1.1e-07 Score=82.31 Aligned_cols=93 Identities=8% Similarity=0.034 Sum_probs=75.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC-----CceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~-----~sfD~V~s~ 66 (276)
++.+.+||.++.|.+..+..+. +.|++.|+++.. ..++.++++|+.++++.. ..||+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccccccccccCccEEEEc
Confidence 5788999999999875543332 788888887752 236899999999876543 349999999
Q ss_pred cccccCC--h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 67 SSSHELP--G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 67 ~~l~~~~--~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.++|+++ + ..++++++|+|||||+|++.++..
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 9999998 4 789999999999999999998864
No 91
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.58 E-value=4.2e-07 Score=83.61 Aligned_cols=92 Identities=14% Similarity=0.079 Sum_probs=73.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||+|+.|.+.-+..+. +.|++.|+++....+. ++.++.+|+.+.+++.. |+|++...
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~v 265 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRI 265 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEech
Confidence 4567899999998875443333 4577888777665443 49999999998887654 99999999
Q ss_pred cccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 023870 69 SHELPG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 69 l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++++ ..+|++++++|||||+|++.++.
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 999986 77899999999999999998854
No 92
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.58 E-value=9.6e-08 Score=85.72 Aligned_cols=55 Identities=20% Similarity=0.375 Sum_probs=47.3
Q ss_pred CeEEEeccCCCCC-----CCCCceeEEEeccccccCC------h-HHHHHHHHHhccCCcEEEEEec
Q 023870 42 QIITQASSLSQLP-----VESFSIDTVLSISSSHELP------G-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 42 ~v~~~~~d~~~lp-----~~~~sfD~V~s~~~l~~~~------~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
++.+.++|+...+ +..++||+|++..+++|++ . ..++++++++|||||+|++...
T Consensus 155 ~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 155 NVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp TEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred cceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 5899999987654 6788999999999988874 3 7899999999999999999754
No 93
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.58 E-value=3.3e-07 Score=84.05 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=86.9
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||.|+.|.+.-+..+. +.|++.|+++....+. ++.++.+|+.+ +++. .||+|++...
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 3567899999998875433332 5678888877665544 59999999875 4554 4999999999
Q ss_pred cccCCh---HHHHHHHHHhccCCcEEEEEecC-C-CCch-hHHH---------------HHHHHHHHHHHCCCcchhhhh
Q 023870 69 SHELPG---DQLLEEISRVLKPGGTILIYKKL-T-SDKG-DVDK---------------AISALEGKLLLAGFLDAQRIQ 127 (276)
Q Consensus 69 l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~-~-~~~~-~~~~---------------~~~~l~~~l~laGF~~v~~~~ 127 (276)
+|++++ ..++++++++|||||+|++.++. . .... .... ..+.+...+..+||..++...
T Consensus 259 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 259 LLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 999987 37999999999999999999876 2 1100 0100 124566678888998765443
No 94
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.57 E-value=1.2e-07 Score=87.18 Aligned_cols=118 Identities=13% Similarity=0.123 Sum_probs=80.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhh--hCCCCeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVE--QCDPQIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~--~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.+.+||+|+.|.+..+..+. +.+.. +++.. ....++.++.+|+. .+++ +||+|++..+
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRI 256 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESC
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehh
Confidence 4567899999999876544343 22222 22221 12345899999996 4555 8999999999
Q ss_pred cccCCh---HHHHHHHHHhccCCcEEEEEecCCCCc-hh-HH---------------HHHHHHHHHHHHCCCcchhhh
Q 023870 69 SHELPG---DQLLEEISRVLKPGGTILIYKKLTSDK-GD-VD---------------KAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 69 l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~-~~-~~---------------~~~~~l~~~l~laGF~~v~~~ 126 (276)
+|++++ ..+|++++|+|||||+|++.+...... .. .. ...+++...+..+||..++..
T Consensus 257 lh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 334 (348)
T 3lst_A 257 LHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVV 334 (348)
T ss_dssp GGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 999987 489999999999999999998643211 00 00 012456667888888876554
No 95
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.56 E-value=6.3e-07 Score=73.67 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=73.1
Q ss_pred CCCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCCCC---eEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCDPQ---IITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~~~---v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
.+.+.+||.++.|.+.....+ .+.|++.++++....+.. +.+..+++.+ +++.++||+|++...
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPP 128 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCC
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCC
Confidence 357889999999886443322 277888888777655443 8999999877 456789999999888
Q ss_pred cccC-Ch-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 SHEL-PG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~~-~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+|+. .. ..++++++++|||||++++..+..
T Consensus 129 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 129 IRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp STTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 7763 33 789999999999999999998764
No 96
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.55 E-value=1.2e-06 Score=75.52 Aligned_cols=116 Identities=20% Similarity=0.153 Sum_probs=78.3
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCC----CCCCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQ----LPVESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~----lp~~~~sfD~V~s 65 (276)
++.|.+||+++.|.+..+..+. +.|++.+++++... .++.++.+|+.. +++. ++||+|+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~ 149 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIYE 149 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEEE
Confidence 4678899999999875432222 66777777765443 568999999988 7777 79999993
Q ss_pred ccccccCC-h---HHHHHHHHHhccCCcEEEEEecCC--CCchhHHHH-HHHHHHHHHHCCCcchhhhh
Q 023870 66 ISSSHELP-G---DQLLEEISRVLKPGGTILIYKKLT--SDKGDVDKA-ISALEGKLLLAGFLDAQRIQ 127 (276)
Q Consensus 66 ~~~l~~~~-~---~~~l~ei~rvLKPgG~l~i~~~~~--~~~~~~~~~-~~~l~~~l~laGF~~v~~~~ 127 (276)
+++ . ..++++++|+|||||+|++..... ......... .+.+. .|..+||..++...
T Consensus 150 -----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 150 -----DVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp -----CCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred -----ecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 222 2 567999999999999999962111 111111121 23555 77888998665443
No 97
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.53 E-value=1.8e-07 Score=83.06 Aligned_cols=93 Identities=15% Similarity=0.205 Sum_probs=73.3
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC-----CCeEEEeccCCCCC---CCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD-----PQIITQASSLSQLP---VESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~-----~~v~~~~~d~~~lp---~~~~sfD~V~ 64 (276)
..+.+||.|+.|.+..+..+. +.|++.|+++..... .++.+..+++..++ +++++||+|+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 457889999999875544333 788888876542221 34778889999888 8899999999
Q ss_pred ec-cccccCCh--------HHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SI-SSSHELPG--------DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~-~~l~~~~~--------~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+. .+++|+++ ..++++++|+|||||+|++..+.
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 98 78887764 67999999999999999998764
No 98
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.52 E-value=7e-07 Score=76.38 Aligned_cols=110 Identities=13% Similarity=0.066 Sum_probs=79.6
Q ss_pred CCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCC--CCCCceeEEEeccc
Q 023870 6 MQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLP--VESFSIDTVLSISS 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp--~~~~sfD~V~s~~~ 68 (276)
.+..||.|+.|.+.-+..+. +.|++.|++++...+. ++.++++|+..++ +++++||.|++.+.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 47789999999875433222 7788888887766654 5899999999876 78899999998765
Q ss_pred cccCC---------hHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 69 SHELP---------GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 69 l~~~~---------~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
..|.. ...++++++|+|||||.|++.+... .. ...+...+..+||..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~----~~---~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR----GL---FEYSLKSFSEYGLLL 173 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH----HH---HHHHHHHHHHHTCEE
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH----HH---HHHHHHHHHHCCCcc
Confidence 44432 2579999999999999999987431 11 123344566678754
No 99
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.50 E-value=6.5e-07 Score=78.85 Aligned_cols=114 Identities=16% Similarity=0.056 Sum_probs=82.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCC---CCceeEEEec
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVE---SFSIDTVLSI 66 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~---~~sfD~V~s~ 66 (276)
+.+.+||+|+.|.+.++..+. +.|++.|++++...+. ++.++++++++++.. +++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 568899999999987733222 7788888887776665 499999999988753 4799999996
Q ss_pred cccccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 67 SSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 67 ~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
... +-..++.+++++|||||+|++..... ...++ ..+...+...||...+..
T Consensus 159 a~~---~~~~ll~~~~~~LkpgG~l~~~~g~~-~~~e~----~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 159 AVA---PLCVLSELLLPFLEVGGAAVAMKGPR-VEEEL----APLPPALERLGGRLGEVL 210 (249)
T ss_dssp SSC---CHHHHHHHHGGGEEEEEEEEEEECSC-CHHHH----TTHHHHHHHHTEEEEEEE
T ss_pred CcC---CHHHHHHHHHHHcCCCeEEEEEeCCC-cHHHH----HHHHHHHHHcCCeEEEEE
Confidence 432 12789999999999999999876431 11222 245556777898865543
No 100
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.50 E-value=6.5e-07 Score=78.63 Aligned_cols=114 Identities=11% Similarity=0.064 Sum_probs=81.0
Q ss_pred CC-CCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC--CeEEEeccCCCCC--CCCCceeEEEe
Q 023870 4 GK-MQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP--QIITQASSLSQLP--VESFSIDTVLS 65 (276)
Q Consensus 4 ~~-~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp--~~~~sfD~V~s 65 (276)
++ .+.+||+++.|.+..+..+ .+.|++.|++++...+. ++.++++|+.+++ ++.++||+|++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEE
Confidence 45 7889999999887542222 27888888887766554 4899999998876 56889999999
Q ss_pred ccccccC--------------------Ch-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 66 ISSSHEL--------------------PG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 66 ~~~l~~~--------------------~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
+..++.. .+ ..++++++++|||||+|++..... ... .+...+...||....
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~~~----~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE----RLL----DIIDIMRKYRLEPKR 197 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT----THH----HHHHHHHHTTEEEEE
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH----HHH----HHHHHHHHCCCceEE
Confidence 7544322 11 569999999999999999965432 122 445567778887654
Q ss_pred h
Q 023870 125 R 125 (276)
Q Consensus 125 ~ 125 (276)
.
T Consensus 198 ~ 198 (259)
T 3lpm_A 198 I 198 (259)
T ss_dssp E
T ss_pred E
Confidence 3
No 101
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.50 E-value=2.7e-07 Score=80.84 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=70.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc-cc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS-HE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l-~~ 71 (276)
+.+.+||.++.|.+.-+..+. +.|++.|+++.. . .++++++..+++++++||+|++...+ |+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~----~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGV----K-NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTC----S-CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcC----C-CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 468899999998875433332 788888877643 1 27889999999999999999997755 44
Q ss_pred CCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 72 LPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 72 ~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.++ ..++++++|+|||||+|++..+.
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 455 88999999999999999998865
No 102
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.49 E-value=5.7e-07 Score=77.89 Aligned_cols=91 Identities=14% Similarity=0.216 Sum_probs=71.7
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecc-cccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS-SSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~-~l~~ 71 (276)
+.+.+||.++.|.+.-+..+. +.|++.|+++....+.++.++++|+.+++++ ++||+|++.. .+++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 467899999999875433332 7888988888776677799999999998875 6899999864 4455
Q ss_pred CC--h-HHHHHHHHHhccCCcEEEEEec
Q 023870 72 LP--G-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 72 ~~--~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
++ + ..++++++++|||||.|++..+
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 54 2 7899999999999999987654
No 103
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.47 E-value=3.2e-07 Score=85.17 Aligned_cols=115 Identities=10% Similarity=0.067 Sum_probs=81.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||+|+.|.+..+..+. +.|++.|++ ..++.++.+|+.+ |++.. |+|++...+|
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-----~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA-----FSGVEHLGGDMFD-GVPKG--DAIFIKWICH 272 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-----CTTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhh-----cCCCEEEecCCCC-CCCCC--CEEEEechhh
Confidence 4567899999999875544333 334443332 2568999999987 77754 9999999999
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEecCCCCc--h----------hHHH----------HHHHHHHHHHHCCCcchhh
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYKKLTSDK--G----------DVDK----------AISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~--~----------~~~~----------~~~~l~~~l~laGF~~v~~ 125 (276)
++++ ..+|++++|+|||||+|++.+...... . ++.. +.+++...+..+||..++.
T Consensus 273 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~ 352 (368)
T 3reo_A 273 DWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKV 352 (368)
T ss_dssp GBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEE
Confidence 9986 478999999999999999998653210 0 0000 0234566788888887665
Q ss_pred h
Q 023870 126 I 126 (276)
Q Consensus 126 ~ 126 (276)
.
T Consensus 353 ~ 353 (368)
T 3reo_A 353 A 353 (368)
T ss_dssp E
T ss_pred E
Confidence 4
No 104
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.47 E-value=7.7e-07 Score=82.49 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=67.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||+|+.|.+.-+..+. +.|++.|++ ..++.++.+|+.+ |++.. |+|++.+.+|
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-----~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQ-----FPGVTHVGGDMFK-EVPSG--DTILMKWILH 270 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-----CTTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhh-----cCCeEEEeCCcCC-CCCCC--CEEEehHHhc
Confidence 4567899999999875544343 334433322 2569999999987 88764 9999999999
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++ ..+|++++++|||||+|++.+..
T Consensus 271 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 271 DWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9976 57899999999999999999865
No 105
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.47 E-value=4e-07 Score=78.19 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=77.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccC-CCCCCC-CCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSL-SQLPVE-SFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~-~~lp~~-~~sfD~V~s~~~l 69 (276)
++.|.+||.++.|.+.-+..+. +.|++.++++ ..++.++++|+ +.+|++ +++||+|++..
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-- 119 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSRR-- 119 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEES--
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeCC--
Confidence 4678999999999875433222 7888888776 34689999999 688998 89999999872
Q ss_pred ccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhh
Q 023870 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 70 ~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
....++++++|+|||||+|+..... .+.. .+...+..+||..+..
T Consensus 120 ---~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~-------~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 120 ---GPTSVILRLPELAAPDAHFLYVGPR-LNVP-------EVPERLAAVGWDIVAE 164 (226)
T ss_dssp ---CCSGGGGGHHHHEEEEEEEEEEESS-SCCT-------HHHHHHHHTTCEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCcEEEEeCCc-CCHH-------HHHHHHHHCCCeEEEE
Confidence 1257899999999999999933221 1111 4566788899986543
No 106
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.46 E-value=8.6e-07 Score=80.30 Aligned_cols=119 Identities=16% Similarity=0.170 Sum_probs=82.5
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh-----CCCCeEEEeccCCCCCC--CCCceeEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ-----CDPQIITQASSLSQLPV--ESFSIDTV 63 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~-----~~~~v~~~~~d~~~lp~--~~~sfD~V 63 (276)
+.+.+||+++.|.+.-+..+. +.|++.|+++... ...++.++.+|+...+. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 567899999999875544333 7788888776521 24568999999887654 47899999
Q ss_pred EeccccccCCh-----HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 64 LSISSSHELPG-----DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 64 ~s~~~l~~~~~-----~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
++....++.+. .+++++++|+|||||+|++........ ......+...+..+||..+...
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD---LELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC---HHHHHHHHHHHHHHTCSEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc---hHHHHHHHHHHHhCCCCcEEEE
Confidence 99765554332 589999999999999999986543111 1223466677888999876543
No 107
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.46 E-value=1.4e-06 Score=71.05 Aligned_cols=107 Identities=9% Similarity=-0.055 Sum_probs=74.9
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC--CeEEEeccCC-CCCCCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP--QIITQASSLS-QLPVESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~--~v~~~~~d~~-~lp~~~~sfD~V~s~ 66 (276)
++.|.+||+++.|.+.-+..+. +.|++.|+++....+. ++ ++.+++. .++...++||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 4678899999998864433222 7788888887766554 47 7778774 334333899999998
Q ss_pred cccccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 67 SSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 67 ~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
..+++ ..++++++++|||||++++...... . ...+...+...|+.
T Consensus 102 ~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~---~----~~~~~~~~~~~~~~ 146 (178)
T 3hm2_A 102 GGLTA---PGVFAAAWKRLPVGGRLVANAVTVE---S----EQMLWALRKQFGGT 146 (178)
T ss_dssp C-TTC---TTHHHHHHHTCCTTCEEEEEECSHH---H----HHHHHHHHHHHCCE
T ss_pred CcccH---HHHHHHHHHhcCCCCEEEEEeeccc---c----HHHHHHHHHHcCCe
Confidence 88776 5789999999999999999886521 1 12344456666654
No 108
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.46 E-value=9.8e-07 Score=78.76 Aligned_cols=91 Identities=13% Similarity=0.195 Sum_probs=71.4
Q ss_pred CCcEEEEccCC---CCcHHH--------------HHHHHHHHHHHhhhhCCCCeEEEeccCCCCC-----------CCCC
Q 023870 7 QSAVLALSEDK---ILPVSA--------------VLNAIRDLGDEAVEQCDPQIITQASSLSQLP-----------VESF 58 (276)
Q Consensus 7 g~~vL~v~~~~---~~~~~~--------------v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp-----------~~~~ 58 (276)
...||+|+.|. +.-... +.+.|++.|+++... ..++.++++|+.+.+ ++.+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 36899999988 422111 118899999887643 346899999997531 3345
Q ss_pred ceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecCC
Q 023870 59 SIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 59 sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+||+|++..++||+++ ..+|++++|+|||||+|++.+...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 8999999999999985 789999999999999999999875
No 109
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.45 E-value=2.3e-07 Score=78.60 Aligned_cols=107 Identities=20% Similarity=0.231 Sum_probs=77.9
Q ss_pred CCCCcEEEEccCCCCcHHHHHHHHHHHHHHhhhh---CCCCeEEEeccCCCCCCCCCceeEEEeccccccCCh-HHHHHH
Q 023870 5 KMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQ---CDPQIITQASSLSQLPVESFSIDTVLSISSSHELPG-DQLLEE 80 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~---~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~~-~~~l~e 80 (276)
..+.+||.++.|.+..+..+ + .++.. ....+.+.++++.++|+++++||+|++..++|+ .+ ..++++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l-------~-~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~ 136 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI-------R-NPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEE 136 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC-------C-SCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHH
T ss_pred CCCCeEEEECCcCCHHHHHh-------h-ccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHH
Confidence 56789999999886432221 1 11111 111356788999999999999999999999886 44 899999
Q ss_pred HHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhh
Q 023870 81 ISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 81 i~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
++++|||||++++.++..... ..+.+...+..+||..+..
T Consensus 137 ~~~~L~~gG~l~i~~~~~~~~-----~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 137 ANRVLKPGGLLKVAEVSSRFE-----DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp HHHHEEEEEEEEEEECGGGCS-----CHHHHHHHHHHTTEEEEEE
T ss_pred HHHhCCCCeEEEEEEcCCCCC-----CHHHHHHHHHHCCCEEEEE
Confidence 999999999999998753211 1236677789999987653
No 110
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.45 E-value=1.2e-06 Score=73.14 Aligned_cols=95 Identities=9% Similarity=0.023 Sum_probs=72.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCC-CCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQLP-VESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp-~~~~sfD~V~s 65 (276)
++.|.+||+++.|.+.-...+. +.|++.|+++....+. ++.++++|+..++ +.+++||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 5788999999999874322221 6788888888776654 5899999998886 66789999998
Q ss_pred ccccc-----cC-C---h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 66 ISSSH-----EL-P---G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 66 ~~~l~-----~~-~---~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
...+. ++ . + ..++++++++|||||++++..+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 76441 11 1 2 579999999999999999988653
No 111
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.44 E-value=5.8e-07 Score=81.62 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=69.0
Q ss_pred CcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhC--CCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 8 SAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQC--DPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~--~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
.+||.|+.|.+..+..+. +.|++.|+++.... ..++.++.+|+.+ +++ .+||+|++...+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDL 246 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCC
Confidence 789999988875444343 23666676665433 2458999999977 666 689999999999988
Q ss_pred Ch---HHHHHHHHHhccCCcEEEEEecC
Q 023870 73 PG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 73 ~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++ ..++++++++|||||+|++.+..
T Consensus 247 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 247 DEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 86 38999999999999999999865
No 112
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.44 E-value=1.1e-06 Score=82.39 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=77.2
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc--
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE-- 71 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~-- 71 (276)
.|.+||+++.|.+.-+..+. +.|++.|++++...+..+.++.+|+.+.+.++++||+|+++..+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 67899999999986544333 7889999888877777789999999998887789999999988887
Q ss_pred ---CCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 72 ---LPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 72 ---~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
... ..++++++++|||||+|++....
T Consensus 313 ~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred cccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 333 78999999999999999998755
No 113
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.44 E-value=7.4e-07 Score=77.34 Aligned_cols=112 Identities=14% Similarity=0.027 Sum_probs=81.9
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhC-C-CCeEEEeccCCCCCCCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQC-D-PQIITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~-~-~~v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
++.|.+||.++.|.+..+..+ .+.|++.|+++.... + .++.+..+|+.+.++++++||+|++.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~ 173 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD 173 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC
Confidence 568899999999886432211 166777777766544 3 45899999999888888999999983
Q ss_pred cccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhhh
Q 023870 67 SSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRIQ 127 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~~ 127 (276)
+++ ..++++++++|||||++++..+.. .....+...+..+||..++...
T Consensus 174 -----~~~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 174 -----LMEPWKVLEKAALALKPDRFLVAYLPNI-------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp -----SSCGGGGHHHHHHHEEEEEEEEEEESCH-------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred -----CcCHHHHHHHHHHhCCCCCEEEEEeCCH-------HHHHHHHHHHHHCCCceEEEEE
Confidence 233 578999999999999999998652 1122445566679998766543
No 114
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.40 E-value=1.8e-06 Score=70.82 Aligned_cols=111 Identities=16% Similarity=0.131 Sum_probs=80.8
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCC-CceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVES-FSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~-~sfD~V~s~~~ 68 (276)
+..+.+||.++.|.+.....+. +.|++.++++....+. ++.+..+++.. +++. .+||+|++...
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGS 109 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCc
Confidence 4678899999998865433332 6778888777665554 68888888876 4444 58999999876
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhh
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
++++ ..++++++++|+|||++++..+.. .....+...+...|| .++.
T Consensus 110 ~~~~--~~~l~~~~~~l~~gG~l~~~~~~~-------~~~~~~~~~l~~~g~-~~~~ 156 (192)
T 1l3i_A 110 GGEL--QEILRIIKDKLKPGGRIIVTAILL-------ETKFEAMECLRDLGF-DVNI 156 (192)
T ss_dssp TTCH--HHHHHHHHHTEEEEEEEEEEECBH-------HHHHHHHHHHHHTTC-CCEE
T ss_pred hHHH--HHHHHHHHHhcCCCcEEEEEecCc-------chHHHHHHHHHHCCC-ceEE
Confidence 5533 689999999999999999988652 112355667888999 4443
No 115
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.39 E-value=5e-06 Score=70.61 Aligned_cols=108 Identities=7% Similarity=-0.047 Sum_probs=78.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
++.|.+||+++.|.+.-...+. +.|++.|++++...+. ++.++.+|+.+.......||+|++...+
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 4678999999999864432222 7888888887766654 4899999998743334689999987633
Q ss_pred ccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 70 HELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 70 ~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
... ++++++++|||||+|++..... .....+...+...||..
T Consensus 133 ---~~~-~l~~~~~~LkpgG~lv~~~~~~-------~~~~~~~~~l~~~g~~i 174 (204)
T 3njr_A 133 ---SQA-LYDRLWEWLAPGTRIVANAVTL-------ESETLLTQLHARHGGQL 174 (204)
T ss_dssp ---CHH-HHHHHHHHSCTTCEEEEEECSH-------HHHHHHHHHHHHHCSEE
T ss_pred ---cHH-HHHHHHHhcCCCcEEEEEecCc-------ccHHHHHHHHHhCCCcE
Confidence 235 9999999999999999988652 11224555677777653
No 116
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.38 E-value=1.5e-06 Score=73.71 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=78.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHH----HHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDL----GDEAVEQCDP-QIITQASSLSQLPVESFSIDTVL 64 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~----A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~ 64 (276)
++.|.+||.++.|.+..+..+. +.|++. |+++....+. ++.++++|++++|+++++ |.|+
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 4678899999999875543333 444443 3333323333 689999999999998877 8777
Q ss_pred eccc---c--ccCCh-HHHHHHHHHhccCCcEEEEEecCCCC---------c--hhHHHHHHHHHHHHHHCCCcchh
Q 023870 65 SISS---S--HELPG-DQLLEEISRVLKPGGTILIYKKLTSD---------K--GDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 65 s~~~---l--~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~---------~--~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
.... . ||+++ ..++++++|+|||||+|++....... . .......+.+...+..+||...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 4432 2 25555 88999999999999999996532110 0 00111223477788999997543
No 117
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.38 E-value=7.6e-07 Score=74.12 Aligned_cols=94 Identities=14% Similarity=0.073 Sum_probs=74.3
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCC--CCCCceeEEEeccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP-QIITQASSLSQLP--VESFSIDTVLSISS 68 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp--~~~~sfD~V~s~~~ 68 (276)
..|.+||+++.|.+.-...+. +.|++.|++++...+. ++.++++|+.+++ +++++||+|++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 468899999999875432122 7888988887766554 6899999998764 45789999999888
Q ss_pred cccC-Ch-HHHHHHHHH--hccCCcEEEEEecCC
Q 023870 69 SHEL-PG-DQLLEEISR--VLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~~-~~-~~~l~ei~r--vLKPgG~l~i~~~~~ 98 (276)
+++. .. ..++.++.+ +|||||+|++.....
T Consensus 123 ~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 7775 34 889999999 999999999987653
No 118
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.38 E-value=1.4e-06 Score=77.34 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=80.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhC-C-CCeEEEeccCCCCCCCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQC-D-PQIITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~-~-~~v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
++.|.+||+++.|.+.....+. +.|++.|+++.... + .++.+..+|+.. ++++++||+|++.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD 186 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc
Confidence 5678999999998764322221 67778887776554 4 358999999987 7778899999982
Q ss_pred cccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 67 SSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+++ ..++++++++|||||++++..+.. . ....+...+..+||..++..
T Consensus 187 -----~~~~~~~l~~~~~~LkpgG~l~i~~~~~----~---~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 187 -----IPDPWNHVQKIASMMKPGSVATFYLPNF----D---QSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp -----CSCGGGSHHHHHHTEEEEEEEEEEESSH----H---HHHHHHHHSGGGTEEEEEEE
T ss_pred -----CcCHHHHHHHHHHHcCCCCEEEEEeCCH----H---HHHHHHHHHHHCCCeEEEEE
Confidence 333 689999999999999999998652 1 12345566777899866543
No 119
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.36 E-value=1.7e-06 Score=72.95 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=71.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||.++.|.+.....+. +.|++.|+++....+. ++.+..+|+...+.+.++||+|++...++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 154 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPP 154 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchh
Confidence 4678999999999865433222 7788888887766553 48999999988777788999999999888
Q ss_pred cCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++++ +++++|||||+|++....
T Consensus 155 ~~~~-----~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 155 EIPT-----ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SCCT-----HHHHTEEEEEEEEEEECS
T ss_pred hhhH-----HHHHhcccCcEEEEEEcC
Confidence 8874 689999999999998765
No 120
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.35 E-value=3.6e-06 Score=72.41 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=74.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCCCeEEEeccCCC---CCCCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDPQIITQASSLSQ---LPVESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~~v~~~~~d~~~---lp~~~~sfD~V~s 65 (276)
++.|.+||+++.|.+.-+..+. +.|++.+.+.+.. ..++.++.+|+.+ +++.+++||+|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-RTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-CTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-cCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 5678999999999874432222 2222322222222 1568999999987 5666789999998
Q ss_pred ccccccCCh-HHHHHHHHHhccCCcEEEEEecCC--CCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 66 ISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT--SDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 66 ~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~--~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
... .... ..++.+++++|||||+|++..... .........+......|..+||..++..
T Consensus 154 ~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 154 DVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 215 (233)
T ss_dssp CCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEE
T ss_pred cCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 654 2222 556889999999999999965431 0001111112122466788899876644
No 121
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.34 E-value=2.7e-06 Score=74.48 Aligned_cols=86 Identities=23% Similarity=0.297 Sum_probs=67.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
+.+.+||+++.|.+.-...+. +.|++.|+++. .++.+..++++.+|+++++||+|+++.+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC-
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh-
Confidence 578899999998865543332 56777776653 45788999999999999999999986553
Q ss_pred cCChHHHHHHHHHhccCCcEEEEEecCCCC
Q 023870 71 ELPGDQLLEEISRVLKPGGTILIYKKLTSD 100 (276)
Q Consensus 71 ~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~ 100 (276)
.++++++|+|||||+|++.++....
T Consensus 159 -----~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 159 -----CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp -----CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred -----hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 3589999999999999999887543
No 122
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.34 E-value=2.4e-06 Score=74.25 Aligned_cols=111 Identities=16% Similarity=0.221 Sum_probs=81.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
++.|.+||+++.|.+.-...+. +.|++.|+++....+. .+.+..+|+.+. +++++||+|++.
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~ 169 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILD 169 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEEC
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEEC
Confidence 5688999999999864422221 6777888777665443 389999999864 778899999984
Q ss_pred cccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCC--Ccchhhhh
Q 023870 67 SSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAG--FLDAQRIQ 127 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laG--F~~v~~~~ 127 (276)
. ++ ..++++++++|||||++++..+.. ...+.+...+..+| |..++...
T Consensus 170 ~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~-------~~~~~~~~~l~~~g~~f~~~~~~e 221 (255)
T 3mb5_A 170 L-----PQPERVVEHAAKALKPGGFFVAYTPCS-------NQVMRLHEKLREFKDYFMKPRTIN 221 (255)
T ss_dssp S-----SCGGGGHHHHHHHEEEEEEEEEEESSH-------HHHHHHHHHHHHTGGGBSCCEEEC
T ss_pred C-----CCHHHHHHHHHHHcCCCCEEEEEECCH-------HHHHHHHHHHHHcCCCccccEEEE
Confidence 3 23 578999999999999999987652 11235566788899 98776543
No 123
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.33 E-value=7.5e-07 Score=81.81 Aligned_cols=86 Identities=9% Similarity=0.114 Sum_probs=66.3
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||.|+.|.+.-+..+. +.|++.|++. .++.++.+|+.. +++. ||+|++..++|
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~-----~~v~~~~~d~~~-~~p~--~D~v~~~~~lh 257 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGS-----NNLTYVGGDMFT-SIPN--ADAVLLKYILH 257 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCB-----TTEEEEECCTTT-CCCC--CSEEEEESCGG
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccC-----CCcEEEeccccC-CCCC--ccEEEeehhhc
Confidence 4567899999999875444333 2344444331 348999999966 6663 99999999999
Q ss_pred cCCh-H--HHHHHHHHhccC---CcEEEEEecC
Q 023870 71 ELPG-D--QLLEEISRVLKP---GGTILIYKKL 97 (276)
Q Consensus 71 ~~~~-~--~~l~ei~rvLKP---gG~l~i~~~~ 97 (276)
++++ . .+|++++|+||| ||+|++.++.
T Consensus 258 ~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 258 NWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp GSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred cCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 9987 4 899999999999 9999999864
No 124
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.33 E-value=9.9e-07 Score=76.08 Aligned_cols=92 Identities=9% Similarity=-0.010 Sum_probs=71.0
Q ss_pred CCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCC-C--CCCCceeEEEecc
Q 023870 6 MQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQL-P--VESFSIDTVLSIS 67 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~l-p--~~~~sfD~V~s~~ 67 (276)
.+..||.|+.|.+.-+..+. +.|++.|++++...+. ++.++++|+..+ + +++++||.|++++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 57789999999875433222 7788888887766654 599999999874 4 7899999999986
Q ss_pred ccccCCh---------HHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHELPG---------DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~~~~---------~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
...|... ..++++++|+|||||+|++.+..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 6555432 25999999999999999998743
No 125
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.32 E-value=7.2e-06 Score=70.12 Aligned_cols=120 Identities=16% Similarity=0.083 Sum_probs=70.9
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCC----CCCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQL----PVESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~l----p~~~~sfD~V~s 65 (276)
++.|++||+++.|.+.-...+. +.|++.+.+++.. ..++.++++|+... ++. ++||+|++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 4789999999999874322111 4433322222221 14578888888763 555 79999998
Q ss_pred ccccccCCh-HHHHHHHHHhccCCcEEEEEecCC--CCchhHHHHHHHHHHHHHHCCCcchhhhhc
Q 023870 66 ISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT--SDKGDVDKAISALEGKLLLAGFLDAQRIQL 128 (276)
Q Consensus 66 ~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~--~~~~~~~~~~~~l~~~l~laGF~~v~~~~~ 128 (276)
... +. .. ..++++++|+|||||+|++..... ................+..+ |..++....
T Consensus 133 ~~~-~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 133 DIA-QK-NQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp CCC-ST-THHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred ecc-Ch-hHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 742 22 22 456999999999999999985321 01111222221112236777 887665543
No 126
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.31 E-value=8.4e-07 Score=78.07 Aligned_cols=113 Identities=15% Similarity=0.093 Sum_probs=81.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.|.+||+++.|.+.-+..+. +.|++.|++++...+..+.+..+++.. ++++++||+|+++...++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL 196 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH
Confidence 4678999999999865432222 566777777766555557888888866 356779999998754443
Q ss_pred CChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 72 LPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 72 ~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+ ..++.+++++|||||+++++..... . ...+...+..+||..++..
T Consensus 197 ~--~~~l~~~~~~LkpgG~lils~~~~~---~----~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 197 H--AALAPRYREALVPGGRALLTGILKD---R----APLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp H--HHHHHHHHHHEEEEEEEEEEEEEGG---G----HHHHHHHHHHTTCEEEEEE
T ss_pred H--HHHHHHHHHHcCCCCEEEEEeeccC---C----HHHHHHHHHHCCCEEEEEe
Confidence 2 6789999999999999999875431 1 1256667888999876543
No 127
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.30 E-value=3.4e-06 Score=74.32 Aligned_cols=112 Identities=15% Similarity=0.155 Sum_probs=79.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhC-C---CCeEEEeccCCCCCCCCCceeEEE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQC-D---PQIITQASSLSQLPVESFSIDTVL 64 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~-~---~~v~~~~~d~~~lp~~~~sfD~V~ 64 (276)
++.|.+||.++.|.+.-+..+. +.|++.|+++.... + .++.+..+|+...++++++||+|+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEE
Confidence 5688999999998764322221 66777777766544 3 468999999999888888999999
Q ss_pred eccccccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHH-CCCcchhhh
Q 023870 65 SISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLL-AGFLDAQRI 126 (276)
Q Consensus 65 s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~l-aGF~~v~~~ 126 (276)
+... ....++.+++++|||||+|++..+.. ..+. .+...+.. .||..++.+
T Consensus 177 ~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~---~~~~----~~~~~l~~~~~f~~~~~~ 228 (280)
T 1i9g_A 177 LDML----APWEVLDAVSRLLVAGGVLMVYVATV---TQLS----RIVEALRAKQCWTEPRAW 228 (280)
T ss_dssp EESS----CGGGGHHHHHHHEEEEEEEEEEESSH---HHHH----HHHHHHHHHSSBCCCEEE
T ss_pred ECCc----CHHHHHHHHHHhCCCCCEEEEEeCCH---HHHH----HHHHHHHhcCCcCCcEEE
Confidence 8432 12578999999999999999998652 1121 33333444 789876544
No 128
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.30 E-value=2.6e-06 Score=74.26 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=66.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh------CC-CCeEEEeccCCC-CC--CCCCce
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ------CD-PQIITQASSLSQ-LP--VESFSI 60 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~------~~-~~v~~~~~d~~~-lp--~~~~sf 60 (276)
..+..||.|+.|.+.-+..+. +.|++.|++++.. .+ .++.++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 446678999988875433222 7788887765432 22 458999999986 77 889999
Q ss_pred eEEEeccccccCC---------hHHHHHHHHHhccCCcEEEEEecC
Q 023870 61 DTVLSISSSHELP---------GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 61 D~V~s~~~l~~~~---------~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|.|++.+...|.. ...++++++|+|||||.|++....
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9999876544432 147999999999999999998643
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.28 E-value=2.3e-06 Score=78.82 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=69.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCC--eEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQ--IITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~--v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+..|.+||+|+.|.+.-+..+. ..|++.|++++...+.. +.+++++++++++++++||+|++....
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3567899999999874432222 13777888777665543 899999999999999999999996543
Q ss_pred ccC---Ch-HHHHHHHHHhccCCcEEEEE
Q 023870 70 HEL---PG-DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 70 ~~~---~~-~~~l~ei~rvLKPgG~l~i~ 94 (276)
+++ .. ..++.++.|+|||||+|+..
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 333 34 78999999999999999743
No 130
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.28 E-value=1.1e-06 Score=81.28 Aligned_cols=86 Identities=12% Similarity=0.167 Sum_probs=66.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.+.+||.|+.|.+.-+..+. +.|++.|++ ..++.++.+|+.+ +++. ||+|++..++|
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~-----~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPP-----LSGIEHVGGDMFA-SVPQ--GDAMILKAVCH 278 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-----CTTEEEEECCTTT-CCCC--EEEEEEESSGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhh-----cCCCEEEeCCccc-CCCC--CCEEEEecccc
Confidence 4567899999999875443332 334443332 1458999999987 7765 99999999999
Q ss_pred cCCh-H--HHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPG-D--QLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~-~--~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++++ . .+|++++|+|||||+|++.+..
T Consensus 279 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 279 NWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9987 4 8999999999999999998754
No 131
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.26 E-value=6.7e-07 Score=84.77 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=70.8
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhh-------hhCC---CCeEEEeccCCCCCCCC-
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAV-------EQCD---PQIITQASSLSQLPVES- 57 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~-------~~~~---~~v~~~~~d~~~lp~~~- 57 (276)
.++.|+.||+|+.|.+..+..+. +.|+++|++.+ ...+ .+|.++++|+.++|+.+
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 36789999999999975432221 56677766532 2222 46999999999999865
Q ss_pred -CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 58 -FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 58 -~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
..||+|++++.++ .++ ...|.+++|+|||||+|++.+...
T Consensus 250 ~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 250 IANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred cCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 5799999877654 345 888999999999999999887653
No 132
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.25 E-value=3.9e-06 Score=71.67 Aligned_cols=89 Identities=12% Similarity=0.053 Sum_probs=69.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.+.+||.++.|.+.....+. +.|++.++++....+ ++.++.+|+......+++||+|++...+++
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHH
Confidence 4678899999999865433222 778888888766555 789999999873335679999999998888
Q ss_pred CChHHHHHHHHHhccCCcEEEEEecCC
Q 023870 72 LPGDQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 72 ~~~~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+. .+++++|||||++++.....
T Consensus 147 ~~-----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 147 LL-----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CC-----HHHHHTEEEEEEEEEEECSS
T ss_pred HH-----HHHHHHcCCCcEEEEEEcCC
Confidence 76 46899999999999997653
No 133
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.25 E-value=3.3e-06 Score=75.21 Aligned_cols=89 Identities=16% Similarity=0.066 Sum_probs=65.6
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCC-----CCCceeEEEe
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPV-----ESFSIDTVLS 65 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~-----~~~sfD~V~s 65 (276)
.++.|.+||+++.|.+.-+..+. +.|++.|++++.... +..++..++. .+++||+|++
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~~-----v~~~~~~~~~~~~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADRC-----VTIDLLDITAEIPKELAGHFDFVLN 116 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSSC-----CEEEECCTTSCCCGGGTTCCSEEEE
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcc-----ceeeeeecccccccccCCCccEEEE
Confidence 35678999999999875432222 889999988765442 2233333332 2578999999
Q ss_pred ccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 023870 66 ISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 66 ~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
..++||+.. ..++++++++| |||+|+++...
T Consensus 117 ~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 117 DRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 999988764 67999999999 99999998754
No 134
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.25 E-value=3.3e-06 Score=77.59 Aligned_cols=89 Identities=12% Similarity=0.043 Sum_probs=68.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEecc--
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSIS-- 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~-- 67 (276)
+..|.+||+|+.|.+.-+..+. ..|++.|++++...+ .++.+++++++++++++++||+|++..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 4578899999999864322221 127777877766555 358999999999999989999999865
Q ss_pred -ccccCCh-HHHHHHHHHhccCCcEEE
Q 023870 68 -SSHELPG-DQLLEEISRVLKPGGTIL 92 (276)
Q Consensus 68 -~l~~~~~-~~~l~ei~rvLKPgG~l~ 92 (276)
.+++... ..++.++.|+|||||+++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3344444 779999999999999997
No 135
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.24 E-value=9.5e-06 Score=71.50 Aligned_cols=95 Identities=9% Similarity=0.119 Sum_probs=69.6
Q ss_pred CCCCCCcEEEEccCCCCcHHHH--------------HHHHHHHHHHhhhh---CCC--CeEEEeccCCCC-------CCC
Q 023870 3 TGKMQSAVLALSEDKILPVSAV--------------LNAIRDLGDEAVEQ---CDP--QIITQASSLSQL-------PVE 56 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v--------------~~~m~~~A~~~~~~---~~~--~v~~~~~d~~~l-------p~~ 56 (276)
.++.+.+||+++.|.+.....+ .+.|++.|++++.. .+. ++.++++|+.++ +++
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 3567889999999887542211 17788888887765 444 389999999887 367
Q ss_pred CCceeEEEeccccccC-----------------C-h-HHHHHHHHHhccCCcEEEEEecC
Q 023870 57 SFSIDTVLSISSSHEL-----------------P-G-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 57 ~~sfD~V~s~~~l~~~-----------------~-~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+++||+|+++..++.. . . ..+++++.++|||||+|++....
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 8899999997433322 1 2 68899999999999999987643
No 136
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.24 E-value=5.4e-06 Score=73.30 Aligned_cols=110 Identities=12% Similarity=0.126 Sum_probs=79.6
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
++.|.+||.++.|.+.-+..+ .+.|++.|+++....+. ++.+..+|+.+. +++++||+|++.
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC
Confidence 467889999998886432211 16677778777665554 588999999876 777899999984
Q ss_pred cccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 67 SSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
. ++ ..++.+++++|||||+|++..+.. .. ...+...+..+||..++..
T Consensus 189 ~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~---~~----~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 189 V-----PDPWNYIDKCWEALKGGGRFATVCPTT---NQ----VQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp C-----SCGGGTHHHHHHHEEEEEEEEEEESSH---HH----HHHHHHHHHHSSEEEEEEE
T ss_pred C-----cCHHHHHHHHHHHcCCCCEEEEEeCCH---HH----HHHHHHHHHHCCCceeEEE
Confidence 3 33 578999999999999999998642 11 2244556777999876544
No 137
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.24 E-value=5.4e-06 Score=73.38 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=79.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
..+.+||+++.|.+..+..+. +.|++.|++++...+. ++.++++|+.. ++++++||+|+++..+
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPY 186 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCC
Confidence 467799999888865432222 6788888887765554 58999999876 3557799999997443
Q ss_pred ccC-------------C------------h-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcch
Q 023870 70 HEL-------------P------------G-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 70 ~~~-------------~------------~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v 123 (276)
+.. + . ..++.+++++|||||++++..... . . +.+...+..+||..+
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~----~-~---~~~~~~l~~~Gf~~v 258 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ----Q-G---EAVRQAFILAGYHDV 258 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS----C-H---HHHHHHHHHTTCTTC
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch----H-H---HHHHHHHHHCCCcEE
Confidence 221 1 2 678899999999999999875432 1 1 145566788999866
Q ss_pred hh
Q 023870 124 QR 125 (276)
Q Consensus 124 ~~ 125 (276)
+.
T Consensus 259 ~~ 260 (276)
T 2b3t_A 259 ET 260 (276)
T ss_dssp CE
T ss_pred EE
Confidence 53
No 138
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.22 E-value=7.5e-06 Score=76.03 Aligned_cols=112 Identities=14% Similarity=0.054 Sum_probs=77.3
Q ss_pred CCCcEEEEccCCCCcHHHH--------------HHHHHHHHHHhhhhCCC-CeEEEeccCCC-CCC-CCCceeEEEeccc
Q 023870 6 MQSAVLALSEDKILPVSAV--------------LNAIRDLGDEAVEQCDP-QIITQASSLSQ-LPV-ESFSIDTVLSISS 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v--------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~-lp~-~~~sfD~V~s~~~ 68 (276)
.|.+||+++ |.+.-+..+ .+.|++.|++++...+. ++.++++|+.. +|. .+++||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 578999999 876432211 27888989888776555 69999999988 764 4578999999876
Q ss_pred cccCChHHHHHHHHHhccCCcEE-EEEecC-CCCchhHHHHHHHHHHHHH-HCCCcc
Q 023870 69 SHELPGDQLLEEISRVLKPGGTI-LIYKKL-TSDKGDVDKAISALEGKLL-LAGFLD 122 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l-~i~~~~-~~~~~~~~~~~~~l~~~l~-laGF~~ 122 (276)
++......++++++++|||||++ ++.... ..+. ..+..+...+. ..||..
T Consensus 251 ~~~~~~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~----~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 251 ETLEAIRAFVGRGIATLKGPRCAGYFGITRRESSL----DKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp SSHHHHHHHHHHHHHTBCSTTCEEEEEECTTTCCH----HHHHHHHHHHHHTSCCEE
T ss_pred CchHHHHHHHHHHHHHcccCCeEEEEEEecCcCCH----HHHHHHHHHHHHhcCcch
Confidence 55443478999999999999954 444433 1221 11234555555 678754
No 139
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.22 E-value=2.2e-07 Score=77.90 Aligned_cols=114 Identities=6% Similarity=-0.040 Sum_probs=64.2
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC-----CceeEEEe
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLS 65 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~-----~sfD~V~s 65 (276)
+.+.+||.++.|.+.-+..+. +.|++.|+++....+.++.++++|+.+ ++++ ++||+|++
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEE
Confidence 678899999999875433222 667777777665554467888888877 6666 89999999
Q ss_pred ccccccCCh---------------------------HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHH--
Q 023870 66 ISSSHELPG---------------------------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLL-- 116 (276)
Q Consensus 66 ~~~l~~~~~---------------------------~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~-- 116 (276)
+..+++... ..++++++++|||||++++.+...... +.+...+.
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~l~~~ 180 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQA-------DEVARLFAPW 180 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCH-------HHHHHHTGGG
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccH-------HHHHHHHHHh
Confidence 654432211 567888999999999955554432111 14455566
Q ss_pred HCCCcchhhh
Q 023870 117 LAGFLDAQRI 126 (276)
Q Consensus 117 laGF~~v~~~ 126 (276)
.+||..+...
T Consensus 181 ~~gf~~~~~~ 190 (215)
T 4dzr_A 181 RERGFRVRKV 190 (215)
T ss_dssp GGGTEECCEE
T ss_pred hcCCceEEEE
Confidence 7889776543
No 140
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.20 E-value=5.5e-06 Score=73.83 Aligned_cols=114 Identities=9% Similarity=-0.025 Sum_probs=82.0
Q ss_pred CCCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
++.|.+||+++.|.+.-+..+ .+.|++.|++++...+. .+.++++|+.+++. .++||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 567899999999987542222 17888888887765554 38899999998876 789999998643
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
. ....++.+++++|||||+|++.+..+.... .....+.+...+..+||..
T Consensus 202 ~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~i~~~~~~~G~~~ 251 (278)
T 2frn_A 202 V---RTHEFIPKALSIAKDGAIIHYHNTVPEKLM-PREPFETFKRITKEYGYDV 251 (278)
T ss_dssp S---SGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-TTTTHHHHHHHHHHTTCEE
T ss_pred h---hHHHHHHHHHHHCCCCeEEEEEEeeccccc-cccHHHHHHHHHHHcCCee
Confidence 2 126789999999999999999887642110 0111235667788889864
No 141
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.19 E-value=6.2e-06 Score=83.99 Aligned_cols=92 Identities=7% Similarity=0.081 Sum_probs=73.8
Q ss_pred CCCCcEEEEccCCCCcHH---------------HHHHHHHHHHHHhhhh------CC-CCeEEEeccCCCCCCCCCceeE
Q 023870 5 KMQSAVLALSEDKILPVS---------------AVLNAIRDLGDEAVEQ------CD-PQIITQASSLSQLPVESFSIDT 62 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~---------------~v~~~m~~~A~~~~~~------~~-~~v~~~~~d~~~lp~~~~sfD~ 62 (276)
..+.+||+|+.|.+..+. ++.+.|++.|++++.. .+ .++.++++|+..+++++++||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 368899999988864322 2338888888775432 12 3589999999999999999999
Q ss_pred EEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 023870 63 VLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 63 V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|++..+++|+++ ..++++++|+|||| .+++.++.
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 999999999997 35899999999999 88888754
No 142
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.19 E-value=1.5e-05 Score=64.83 Aligned_cols=104 Identities=4% Similarity=0.053 Sum_probs=79.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
+..+.+||.++.|.+.-...+. +.|++.++++....+. ++.++.+|+.+ ++++++||+|++...
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~-- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT-- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc--
Confidence 4578899999999875433332 7888888887766554 58899999987 788889999999876
Q ss_pred cCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 71 ELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 71 ~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
.. ..++++++++ |||.+++..+.. . ....+...+..+||.
T Consensus 110 --~~~~~~l~~~~~~--~gG~l~~~~~~~---~----~~~~~~~~l~~~g~~ 150 (183)
T 2yxd_A 110 --KNIEKIIEILDKK--KINHIVANTIVL---E----NAAKIINEFESRGYN 150 (183)
T ss_dssp --SCHHHHHHHHHHT--TCCEEEEEESCH---H----HHHHHHHHHHHTTCE
T ss_pred --ccHHHHHHHHhhC--CCCEEEEEeccc---c----cHHHHHHHHHHcCCe
Confidence 33 7899999999 999999998652 1 123566678888974
No 143
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.19 E-value=2.9e-06 Score=73.42 Aligned_cols=121 Identities=10% Similarity=0.138 Sum_probs=75.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHH---HHhhhhCCC-CeEEEeccCCCCCCC-CCceeEE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLG---DEAVEQCDP-QIITQASSLSQLPVE-SFSIDTV 63 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A---~~~~~~~~~-~v~~~~~d~~~lp~~-~~sfD~V 63 (276)
.++|.+||+|+.|.+..+..+. +.|+++| ++++...+. ++.+.+++++.+|.. ...||.|
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEE
Confidence 4678899999999875543332 6677666 666655554 589999999998642 2455555
Q ss_pred Eecccccc-----CCh-HHHHHHHHHhccCCcEEEEEecCCCCch-------h----HHHH-H-HHHHHHHHHCCCcchh
Q 023870 64 LSISSSHE-----LPG-DQLLEEISRVLKPGGTILIYKKLTSDKG-------D----VDKA-I-SALEGKLLLAGFLDAQ 124 (276)
Q Consensus 64 ~s~~~l~~-----~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~-------~----~~~~-~-~~l~~~l~laGF~~v~ 124 (276)
++++...+ ..+ ..++++++|+|||||+|++......... . .... . .++...+..+||....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeee
Confidence 55443211 112 5789999999999999998332211100 0 0011 1 1366778889997543
No 144
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.16 E-value=3.3e-06 Score=77.66 Aligned_cols=85 Identities=9% Similarity=0.093 Sum_probs=64.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
+.+.+||+|+.|.+.-+..+. +.|++.|++ ..++.++.+|+.. +++ .||+|++...+|+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-----~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG-----NENLNFVGGDMFK-SIP--SADAVLLKWVLHD 263 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC-----CSSEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc-----CCCcEEEeCccCC-CCC--CceEEEEcccccC
Confidence 456789999998875433333 223332222 1348999999987 776 4999999999999
Q ss_pred CCh-H--HHHHHHHHhccC---CcEEEEEecC
Q 023870 72 LPG-D--QLLEEISRVLKP---GGTILIYKKL 97 (276)
Q Consensus 72 ~~~-~--~~l~ei~rvLKP---gG~l~i~~~~ 97 (276)
+++ . .+|++++|+||| ||+|++.++.
T Consensus 264 ~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 264 WNDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp SCHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 987 5 899999999999 9999998864
No 145
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.15 E-value=1.1e-05 Score=72.52 Aligned_cols=92 Identities=8% Similarity=0.046 Sum_probs=69.4
Q ss_pred CcEEEEccCCCC--cHHHH---------------HHHHHHHHHHhhhhCC-CCeEEEeccCCCCC------CCCCcee--
Q 023870 8 SAVLALSEDKIL--PVSAV---------------LNAIRDLGDEAVEQCD-PQIITQASSLSQLP------VESFSID-- 61 (276)
Q Consensus 8 ~~vL~v~~~~~~--~~~~v---------------~~~m~~~A~~~~~~~~-~~v~~~~~d~~~lp------~~~~sfD-- 61 (276)
..+|+|+.|..+ +...+ .+.|+++|+++..... .++.|+++|+.+++ ...++||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 468999999632 22211 1899999988775432 35899999998863 1145676
Q ss_pred ---EEEeccccccCCh----HHHHHHHHHhccCCcEEEEEecCCC
Q 023870 62 ---TVLSISSSHELPG----DQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 62 ---~V~s~~~l~~~~~----~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
.|+++.++||+++ ..+++++++.|+|||+|++++....
T Consensus 160 ~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 160 RPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp SCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 5888999999987 3699999999999999999987753
No 146
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.14 E-value=2.3e-06 Score=76.69 Aligned_cols=53 Identities=13% Similarity=0.188 Sum_probs=47.1
Q ss_pred CeEEEeccCCCCCCC-CCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEE
Q 023870 42 QIITQASSLSQLPVE-SFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 42 ~v~~~~~d~~~lp~~-~~sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~ 94 (276)
.|.|.++|+.+.|++ .+.||+|+|.++++|+++ ..++++++++|||||+|++.
T Consensus 195 ~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 195 YVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp TEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred cCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 488999999887776 678999999999999876 68999999999999999974
No 147
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.13 E-value=1.3e-05 Score=72.88 Aligned_cols=116 Identities=17% Similarity=0.067 Sum_probs=77.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
++.|.+||++..|.+.-...+. +.|++.+++++...+. ++.++++|+..++...++||+|++..
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 5678999999888764322222 6677888777766555 58999999988876567899999842
Q ss_pred c------cccCCh-----------------HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcch
Q 023870 68 S------SHELPG-----------------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 68 ~------l~~~~~-----------------~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v 123 (276)
. ++..++ ..+|.+++++|||||+|++++..-..... .. .+...+...||..+
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~En-e~---~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEEN-EF---VIQWALDNFDVELL 270 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGT-HH---HHHHHHHHSSEEEE
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHh-HH---HHHHHHhcCCCEEe
Confidence 1 221111 47899999999999999998765322111 11 33344555676543
No 148
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.13 E-value=4.2e-06 Score=70.77 Aligned_cols=91 Identities=15% Similarity=0.055 Sum_probs=69.3
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC---CeEEEeccCCCCC--CCCCc-eeEEEec
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP---QIITQASSLSQLP--VESFS-IDTVLSI 66 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~---~v~~~~~d~~~lp--~~~~s-fD~V~s~ 66 (276)
.|.+||+++.|.+.-+..+. +.|++.|++++...+. ++.++++|+.++. +++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 57889999888875422211 7889999888776664 6899999987653 24678 9999998
Q ss_pred cccccCCh-HHHHHHH--HHhccCCcEEEEEecC
Q 023870 67 SSSHELPG-DQLLEEI--SRVLKPGGTILIYKKL 97 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei--~rvLKPgG~l~i~~~~ 97 (276)
..++ ... ..+++++ .|+|||||.|++....
T Consensus 133 ~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 133 PPFH-FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCCC-CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 7755 344 7889999 7789999999988765
No 149
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.11 E-value=1.5e-05 Score=65.47 Aligned_cols=105 Identities=10% Similarity=-0.001 Sum_probs=75.3
Q ss_pred CCCCcEEEEccCCCCcHHHHH-----------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccCC
Q 023870 5 KMQSAVLALSEDKILPVSAVL-----------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELP 73 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-----------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~ 73 (276)
..+.+||.++.|.+.-+..+. +.|++. ..++.++++|+.+ ++++++||+|+++..+++.+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~ 92 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES--------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDT 92 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT--------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTC
T ss_pred CCCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc--------ccCCeEEECChhh-hcccCCCCEEEECCCCccCC
Confidence 457799999999875432221 334433 3457889999987 77779999999988877543
Q ss_pred h----------HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 74 G----------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 74 ~----------~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+ ..++.++.+.| |||++++..+.... . +.+...+..+||..+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~---~----~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 93 DDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR---P----KEVLARLEERGYGTRILK 147 (170)
T ss_dssp CCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC---H----HHHHHHHHHTTCEEEEEE
T ss_pred ccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC---H----HHHHHHHHHCCCcEEEEE
Confidence 2 47889999999 99999998865321 1 256667889999865543
No 150
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.10 E-value=3.6e-06 Score=68.91 Aligned_cols=95 Identities=8% Similarity=-0.045 Sum_probs=70.9
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCC-CCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQ-LPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~-lp~~~~sfD~V~s~~ 67 (276)
...+.+||.++.|.+..+..+. +.|++.|++++...+. ++.++.+|+.+ ++...+.||+|++..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 3578899999999875433222 7888888887766654 48899999876 455557899999986
Q ss_pred ccccCChHHHHHHHH--HhccCCcEEEEEecCC
Q 023870 68 SSHELPGDQLLEEIS--RVLKPGGTILIYKKLT 98 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~--rvLKPgG~l~i~~~~~ 98 (276)
.++......++..+. ++|||||.|++.....
T Consensus 109 ~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 109 PYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 654322267778887 9999999999988664
No 151
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.09 E-value=4.2e-05 Score=65.16 Aligned_cols=87 Identities=20% Similarity=0.110 Sum_probs=62.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCCCeEEEeccCCCCC---CCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDPQIITQASSLSQLP---VESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp---~~~~sfD~V~s 65 (276)
++.|.+||+++.|.+..+..+. +.|++.+++++... .++.++++|+.... ...++||+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 5678999999999875432222 55666665555433 56899999998732 12458999997
Q ss_pred ccccccCCh--HHHHHHHHHhccCCcEEEEE
Q 023870 66 ISSSHELPG--DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 66 ~~~l~~~~~--~~~l~ei~rvLKPgG~l~i~ 94 (276)
... .++ ..++.+++++|||||+|++.
T Consensus 150 ~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 150 DVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 654 222 35599999999999999987
No 152
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.09 E-value=1.7e-05 Score=66.32 Aligned_cols=87 Identities=11% Similarity=0.119 Sum_probs=68.0
Q ss_pred CCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCC-eEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 6 MQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQ-IITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~-v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
.+.+||.++.|.+..+..+. +.|++.+++++...+.. +.+..+++.+++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec---
Confidence 47899999999987644333 66888888877665543 899999998876 567999999753
Q ss_pred cCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 71 ELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+.+ ..++.+++++|||||++++....
T Consensus 141 -~~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 141 -FASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp -SSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred -cCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 233 78999999999999999988643
No 153
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.08 E-value=1.1e-05 Score=73.12 Aligned_cols=89 Identities=18% Similarity=0.162 Sum_probs=69.6
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
+++|++||.++.|.+.-+..+ .+.|++.|+++....+. ++.+..+|+...+.+.++||+|++..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcC
Confidence 578999999999986432222 15777888877765553 48999999988665678999999999
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+++++. .+++++|||||++++....
T Consensus 153 ~~~~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 153 GVDEVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BBSCCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred CHHHHH-----HHHHHhcCCCcEEEEEECC
Confidence 988876 5789999999999998643
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.07 E-value=5.1e-06 Score=77.38 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=69.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+..|.+||+|+.|.+.-+..+. ..|++.|++++...+. ++.++.+++++++++ ++||+|++....
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 4678899999999864432222 2567777777766554 389999999999887 899999996655
Q ss_pred ccCC---h-HHHHHHHHHhccCCcEEEEEec
Q 023870 70 HELP---G-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 70 ~~~~---~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+++. . ..++.+++|+|||||.|++...
T Consensus 140 ~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 5543 2 6799999999999999976543
No 155
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.07 E-value=8.4e-06 Score=68.94 Aligned_cols=92 Identities=9% Similarity=-0.026 Sum_probs=69.4
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC-CeEEEeccCCC-CCCCCCceeEEEeccccc
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP-QIITQASSLSQ-LPVESFSIDTVLSISSSH 70 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~-lp~~~~sfD~V~s~~~l~ 70 (276)
.|.+||+++.|.+.-...+. +.|++.|++++...+. ++.++++|+.+ ++...++||+|++...++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 57889999888865422211 7889999888776664 68999999876 566778999999977655
Q ss_pred cCChHHHHHHHHH--hccCCcEEEEEecC
Q 023870 71 ELPGDQLLEEISR--VLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~~~~~~l~ei~r--vLKPgG~l~i~~~~ 97 (276)
.-....+++++.+ +|||||+|++....
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 3223778888865 59999999988754
No 156
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.07 E-value=9.7e-06 Score=65.10 Aligned_cols=91 Identities=14% Similarity=-0.010 Sum_probs=65.3
Q ss_pred CCCCCcEEEEccCCCCcHHHHHHHHHHHH--HHhhhh-------CCCCeEEEeccCCCCC--------CCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVLNAIRDLG--DEAVEQ-------CDPQIITQASSLSQLP--------VESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~~~m~~~A--~~~~~~-------~~~~v~~~~~d~~~lp--------~~~~sfD~V~s~ 66 (276)
++.+.+||.++.|.+.-+. .+.+.. ..++.. .-.++.+.++|+.+.+ +++++||+|++.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~----~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQ----YVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHH----HHHHHHCTTCEEEEEESSCCCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHH----HHHHHhCCCCeEEEEECccccccCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 5788999999998854222 222221 011100 0134788899998887 788899999998
Q ss_pred cccccCCh------------HHHHHHHHHhccCCcEEEEEecCC
Q 023870 67 SSSHELPG------------DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 67 ~~l~~~~~------------~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
..+++... ..++++++++|||||.+++..+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 88776643 378999999999999999988764
No 157
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.06 E-value=5.3e-06 Score=68.08 Aligned_cols=94 Identities=14% Similarity=0.009 Sum_probs=70.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC----CCCCCceeEEEe
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQL----PVESFSIDTVLS 65 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l----p~~~~sfD~V~s 65 (276)
..+.+||.++.|.+.....+. +.|++.|++++...+. ++.++++|+.+. ++..++||+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 468899999998875433222 7788888887766553 589999998763 233789999999
Q ss_pred ccccccCChHHHHHHH--HHhccCCcEEEEEecCC
Q 023870 66 ISSSHELPGDQLLEEI--SRVLKPGGTILIYKKLT 98 (276)
Q Consensus 66 ~~~l~~~~~~~~l~ei--~rvLKPgG~l~i~~~~~ 98 (276)
...++.......+..+ +|+|||||.+++.....
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 123 DPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp CCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 8775533346778888 99999999999987664
No 158
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.06 E-value=2.5e-05 Score=67.13 Aligned_cols=89 Identities=8% Similarity=0.063 Sum_probs=67.7
Q ss_pred CCCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
++.|.+||+++.|.+.-...+ .+.|++.|+++....+ .++.+..+++.+..+++.+||+|++..
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 467899999999875432222 2677888877765555 358899999987554677999999843
Q ss_pred ccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 70 HELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 70 ~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++ ..++++++++|||||++++..+.
T Consensus 167 ---~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 167 ---REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp ---SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ---cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 23 57899999999999999999865
No 159
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.06 E-value=1.2e-05 Score=68.46 Aligned_cols=89 Identities=12% Similarity=0.082 Sum_probs=67.8
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCC------CCeEEEeccCCCCCCCCCceeE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCD------PQIITQASSLSQLPVESFSIDT 62 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~------~~v~~~~~d~~~lp~~~~sfD~ 62 (276)
++.|.+||.++.|.+.-...+. +.|++.++++....+ .++.++.+|+...+...++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 6789999999998864322222 567777777665433 3688999999877666789999
Q ss_pred EEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 63 VLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 63 V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|++...++++ +.+++++|||||+|++....
T Consensus 155 i~~~~~~~~~-----~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 155 IHVGAAAPVV-----PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEECSBBSSC-----CHHHHHTEEEEEEEEEEESC
T ss_pred EEECCchHHH-----HHHHHHhcCCCcEEEEEEec
Confidence 9998877665 46899999999999998764
No 160
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.05 E-value=3.4e-07 Score=79.06 Aligned_cols=89 Identities=11% Similarity=-0.048 Sum_probs=72.2
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
.|.+||+++.|.+..+..+. +.|++.|++++...+. ++.++++|+.+++ ++++||+|++...+++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 68899999999875533332 7889999888777765 6999999998877 6789999999988888
Q ss_pred CCh-HHHHHHHHHhccCCcEEEEEe
Q 023870 72 LPG-DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 72 ~~~-~~~l~ei~rvLKPgG~l~i~~ 95 (276)
... ...+.+++++|+|||.+++..
T Consensus 157 ~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 157 PDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp GGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred cchhhhHHHHHHhhcCCcceeHHHH
Confidence 776 557888999999999976553
No 161
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.03 E-value=7.5e-06 Score=75.07 Aligned_cols=91 Identities=15% Similarity=0.103 Sum_probs=70.0
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
..+.+||+++.|.+.-+..+. +.|++.++++....+..+.++.+|+... .+++||+|+++..+|
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~~~ 272 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE--VKGRFDMIISNPPFH 272 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT--CCSCEEEEEECCCCC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc--ccCCeeEEEECCCcc
Confidence 346788999888875433222 6788888888777666677788888654 377999999998887
Q ss_pred cC-----Ch-HHHHHHHHHhccCCcEEEEEecC
Q 023870 71 EL-----PG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 71 ~~-----~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+. .. ..++++++|+|||||.|++....
T Consensus 273 ~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 273 DGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 52 22 78999999999999999998765
No 162
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.02 E-value=3.3e-05 Score=69.70 Aligned_cols=93 Identities=17% Similarity=0.228 Sum_probs=65.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhC------CCCeEEEeccCCC-CCCCCCceeEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQC------DPQIITQASSLSQ-LPVESFSIDTV 63 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~------~~~v~~~~~d~~~-lp~~~~sfD~V 63 (276)
+...+||+|+.|.+.-+..+. +.|++.|+++.... +.++.++.+|+.. +....++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 456789999988875444333 77888888765432 4568899999865 34557899999
Q ss_pred EeccccccCCh-----HHHHHHHHHhccCCcEEEEEecC
Q 023870 64 LSISSSHELPG-----DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 64 ~s~~~l~~~~~-----~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++....++.+. .+++++++|+|||||+|++....
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 99654433222 67999999999999999998644
No 163
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.02 E-value=2.1e-05 Score=66.35 Aligned_cols=89 Identities=15% Similarity=0.163 Sum_probs=66.0
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
++.+.+||.++.|.+.....+ .+.|++.++++....+. ++.+..+++.......++||+|++..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC
Confidence 467899999999876432222 15677777776654443 48888898854322367899999999
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.+++++ .+++++|||||++++....
T Consensus 155 ~~~~~~-----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP-----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC-----HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH-----HHHHHHcCCCcEEEEEECC
Confidence 988876 4889999999999998865
No 164
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.02 E-value=9e-05 Score=64.75 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=72.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHH----HHHHHhhhhCCCCeEEEeccCCCCCC---CCCcee
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIR----DLGDEAVEQCDPQIITQASSLSQLPV---ESFSID 61 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~----~~A~~~~~~~~~~v~~~~~d~~~lp~---~~~sfD 61 (276)
+++|++||+++.+.+.-...+. +.|+ +.++++ .++.++++|+..... ..++||
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccccchhhhccccceE
Confidence 6799999999988864322111 4443 333322 468899999876431 246899
Q ss_pred EEEeccccccCCh-HH-HHHHHHHhccCCcEEEEEecCCC---CchhHHHHHHHHHHHHHHCCCcchhhhhcccc
Q 023870 62 TVLSISSSHELPG-DQ-LLEEISRVLKPGGTILIYKKLTS---DKGDVDKAISALEGKLLLAGFLDAQRIQLKSV 131 (276)
Q Consensus 62 ~V~s~~~l~~~~~-~~-~l~ei~rvLKPgG~l~i~~~~~~---~~~~~~~~~~~l~~~l~laGF~~v~~~~~~~~ 131 (276)
+|++..+. ++ .. ++..+.++|||||+|++...... +.. .....+.....|..+||...+.....|.
T Consensus 149 ~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~-~~e~~~~~~~~L~~~gf~~~~~~~l~p~ 219 (232)
T 3id6_C 149 VLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKD-PKEIYKTEVEKLENSNFETIQIINLDPY 219 (232)
T ss_dssp EEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CC-SSSSTTHHHHHHHHTTEEEEEEEECTTT
T ss_pred EEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCC-HHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 99987653 33 33 44556669999999998853211 100 0001123445677889987776655443
No 165
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.00 E-value=1.7e-05 Score=72.38 Aligned_cols=89 Identities=18% Similarity=0.099 Sum_probs=66.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
..+.+||+|+.|.+.-+..+. ..|++.|++++...+. ++.++.++++++++++++||+|++....+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 467899999999864322111 2367777777665543 48999999999999889999999875433
Q ss_pred c---CCh-HHHHHHHHHhccCCcEEEE
Q 023870 71 E---LPG-DQLLEEISRVLKPGGTILI 93 (276)
Q Consensus 71 ~---~~~-~~~l~ei~rvLKPgG~l~i 93 (276)
. ... ..++.++.|+|||||+++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 3 233 6889999999999999973
No 166
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.99 E-value=2.5e-06 Score=80.57 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=49.3
Q ss_pred CCCeEEEeccCCCCCCC------CCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 40 DPQIITQASSLSQLPVE------SFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 40 ~~~v~~~~~d~~~lp~~------~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
..++.++++|+.++|+. +++||+|++.. .|++.+ ..+|++++|+|||||+|++.++.
T Consensus 263 ~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 263 ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 35699999999999987 78999999865 466666 88999999999999999998865
No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.99 E-value=5.5e-05 Score=65.68 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=67.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhC--------C-CCeEEEeccCCC-CC--CCC
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQC--------D-PQIITQASSLSQ-LP--VES 57 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~--------~-~~v~~~~~d~~~-lp--~~~ 57 (276)
++.+..||.++.|.+.-+..+. +.|++.+++++... + .++.++.+|+.. ++ ++.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccc
Confidence 3567889999999875432222 66777776655432 3 358999999986 67 788
Q ss_pred CceeEEEeccccccCC---------hHHHHHHHHHhccCCcEEEEEec
Q 023870 58 FSIDTVLSISSSHELP---------GDQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~~---------~~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
++||.|+..+.-.|.. ...++.++.++|||||.|++.+.
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 9999998765433321 14899999999999999999753
No 168
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.98 E-value=4.7e-05 Score=71.16 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=66.4
Q ss_pred CCcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCC---CCeEEEec-----------------------------------
Q 023870 7 QSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCD---PQIITQAS----------------------------------- 48 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~---~~v~~~~~----------------------------------- 48 (276)
..+|++++.+.+.+.-.++..|++..+++....+ +.+.+...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5778999999987766666667665544432211 22333332
Q ss_pred -------cCCCCCCCCCceeEEEeccccccCCh---------------------------------------HHHHHHHH
Q 023870 49 -------SLSQLPVESFSIDTVLSISSSHELPG---------------------------------------DQLLEEIS 82 (276)
Q Consensus 49 -------d~~~lp~~~~sfD~V~s~~~l~~~~~---------------------------------------~~~l~ei~ 82 (276)
+...-.||+++||+|+|++++||+.. ..+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223578999999999999999873 23688889
Q ss_pred HhccCCcEEEEEecCCCC
Q 023870 83 RVLKPGGTILIYKKLTSD 100 (276)
Q Consensus 83 rvLKPgG~l~i~~~~~~~ 100 (276)
|.|+|||++++...+.++
T Consensus 213 ~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHEEEEEEEEEEEEECCC
T ss_pred HHhCCCCEEEEEEecCCC
Confidence 999999999999887643
No 169
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.98 E-value=4.2e-06 Score=67.58 Aligned_cols=92 Identities=11% Similarity=0.042 Sum_probs=68.4
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCC-C-CC--CCceeEEEecccc
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQL-P-VE--SFSIDTVLSISSS 69 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~l-p-~~--~~sfD~V~s~~~l 69 (276)
.+.+||.++.|.+..+..+. +.|++.|+++....+.++.++.+|+.+. + ++ .++||+|++...+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 68899999999875433222 7888888887766555788999998763 3 22 3489999998776
Q ss_pred ccCChHHHHHHHH--HhccCCcEEEEEecCC
Q 023870 70 HELPGDQLLEEIS--RVLKPGGTILIYKKLT 98 (276)
Q Consensus 70 ~~~~~~~~l~ei~--rvLKPgG~l~i~~~~~ 98 (276)
+ .....+++.+. ++|||||.+++.....
T Consensus 121 ~-~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 121 A-MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp T-SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred c-hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 5 22266777777 9999999999988654
No 170
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.95 E-value=2e-05 Score=71.72 Aligned_cols=90 Identities=16% Similarity=0.062 Sum_probs=62.8
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhC------------CCCeEEEeccCCCC--C
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQC------------DPQIITQASSLSQL--P 54 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~------------~~~v~~~~~d~~~l--p 54 (276)
++.|.+||.++.|.+.-...+. +.|++.|+++.... ..++.+..+|+.++ +
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 5689999999998864322221 66777777766532 24689999999877 5
Q ss_pred CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 55 VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 55 ~~~~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+++++||+|++..... ..++.+++++|||||+|++..+.
T Consensus 183 ~~~~~fD~V~~~~~~~----~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 183 IKSLTFDAVALDMLNP----HVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp -----EEEEEECSSST----TTTHHHHGGGEEEEEEEEEEESS
T ss_pred cCCCCeeEEEECCCCH----HHHHHHHHHhcCCCcEEEEEeCC
Confidence 7778999999864322 34789999999999999988864
No 171
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.94 E-value=1.6e-05 Score=73.08 Aligned_cols=90 Identities=12% Similarity=0.119 Sum_probs=67.3
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
..|.+||.|+.|.+.-+..+. ..|.+.|++++...+ .++.++.+++++++++ ++||+|++....+
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBT
T ss_pred CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchh
Confidence 478899999999874322221 136677777666555 3589999999998876 5899999987666
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEe
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~ 95 (276)
++.. ...+.+++|+|||||.+++..
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 5543 578889999999999998553
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.94 E-value=3.6e-05 Score=66.19 Aligned_cols=89 Identities=12% Similarity=0.170 Sum_probs=66.7
Q ss_pred CCCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCC-ceeEEEeccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLPVESF-SIDTVLSISS 68 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~-sfD~V~s~~~ 68 (276)
++.|.+||.++.|.+.-...+ .+.|++.|+++....+. ++.+..+|+ ..++++. .||+|++...
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSB
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCc
Confidence 467889999999876432222 26677888777665553 488888987 4566555 4999999988
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++++. .+++++|||||++++.....
T Consensus 168 ~~~~~-----~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 168 APKIP-----EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp BSSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred HHHHH-----HHHHHhcCCCcEEEEEEecC
Confidence 88775 37899999999999988653
No 173
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.92 E-value=4.5e-05 Score=70.03 Aligned_cols=94 Identities=16% Similarity=0.040 Sum_probs=72.8
Q ss_pred CCCCCcEEEEccCCCCcHH---HH------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVS---AV------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~---~v------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.+.+..||++..|.+.-.. .+ .+.|++.|++++...+. .+.+.++|+.+++.+..+||+|+++.
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 4678899999888875421 11 16788888888877765 58999999999998888899999976
Q ss_pred ccccCC-------h--HHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHELP-------G--DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~~~-------~--~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.+.+.. . ..+++++.++|||||++++.++.
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 543321 1 57899999999999999999865
No 174
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.92 E-value=3.3e-05 Score=72.01 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=68.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC----CeEEEeccCCCCCCCCCceeEEEec
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP----QIITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~----~v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
..+.+||+++.|.+.-+..+. +.|++.|++++...+. ++.+..+|+.+ ++++++||+|+++
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~n 299 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCN 299 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEEC
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEEC
Confidence 345789999998874422222 7788888887665442 47889999987 6778899999998
Q ss_pred cccccC---Ch---HHHHHHHHHhccCCcEEEEEecC
Q 023870 67 SSSHEL---PG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 67 ~~l~~~---~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
..+|+. .. ..++++++++|||||+|++....
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 887752 22 47899999999999999997654
No 175
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.91 E-value=2.4e-05 Score=66.68 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=66.8
Q ss_pred CCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC--CeEEEeccCCC-CCCCC-----Ccee
Q 023870 5 KMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP--QIITQASSLSQ-LPVES-----FSID 61 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~-lp~~~-----~sfD 61 (276)
..+.+||.++.|.+.....+ .+.|++.|++++...+. ++.++++|+.. ++... ++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 45778999988876432222 27888888887766554 48999999754 34322 7899
Q ss_pred EEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 62 TVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 62 ~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++....+++.. ..++..+ ++|||||+|++.+..
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9999876666554 5677777 999999999987765
No 176
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.87 E-value=1.7e-05 Score=66.07 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=63.5
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHHHHHHHH---Hhhhh-------CCCCeEEEeccCCCCC------------------
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNAIRDLGD---EAVEQ-------CDPQIITQASSLSQLP------------------ 54 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~m~~~A~---~~~~~-------~~~~v~~~~~d~~~lp------------------ 54 (276)
.++.|.+||+++.|.+.-.. .+.+... .++-. ...++.++++|+.+++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~----~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 19 FLKKNKIILDIGCYPGSWCQ----VILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp CCCTTEEEEEESCTTCHHHH----HHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCCCCCEEEEeCCCCCHHHH----HHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhh
Confidence 36789999999999864322 2222211 11110 1124788899998877
Q ss_pred -------CCCCceeEEEeccccccCC----h-H-------HHHHHHHHhccCCcEEEEEecCC
Q 023870 55 -------VESFSIDTVLSISSSHELP----G-D-------QLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 55 -------~~~~sfD~V~s~~~l~~~~----~-~-------~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+++.+||+|++...+|+.. + . .++++++++|||||.|++..+..
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 157 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG 157 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC
Confidence 6778999999987776631 2 1 37899999999999999977653
No 177
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.87 E-value=8.4e-05 Score=66.40 Aligned_cols=93 Identities=17% Similarity=0.166 Sum_probs=68.0
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhC-----CCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQC-----DPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~-----~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
+.+.+||+++.|.+..+..+. +.|++.|+++.... ..++.++.+|+.. ++...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 467899999988875444332 77888888876432 4568999999865 333467899999
Q ss_pred eccccccCCh-----HHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SISSSHELPG-----DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~~l~~~~~-----~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+....++.+. .+++++++++|||||.|++....
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 8554333222 58999999999999999988643
No 178
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.85 E-value=6.8e-05 Score=68.30 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=64.5
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhC-----CCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQC-----DPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~-----~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
+.+.+||+|+.|.+.-+..+. +.|++.|+++.... ..++.++.+|+.. ++...++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 456789999988865433332 78889888876532 4568999999865 444578999999
Q ss_pred eccccccCCh-----HHHHHHHHHhccCCcEEEEEec
Q 023870 65 SISSSHELPG-----DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 65 s~~~l~~~~~-----~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+....++.+. .+++++++++|||||.|++...
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 8654332221 5889999999999999998863
No 179
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.85 E-value=4.5e-05 Score=69.74 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=66.5
Q ss_pred cEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhC-CCCeEEEeccCCCC--CCCCCceeEEEecccccc
Q 023870 9 AVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQC-DPQIITQASSLSQL--PVESFSIDTVLSISSSHE 71 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~-~~~v~~~~~d~~~l--p~~~~sfD~V~s~~~l~~ 71 (276)
+||+|+.|.+.-...+. +.|++.|+++.... ..++.++.+|+... .+++++||+|++....++
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~ 171 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGA 171 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCcc
Confidence 89999888765433332 77889888876432 45689999998654 355789999998543332
Q ss_pred -----CChHHHHHHHHHhccCCcEEEEEecCC
Q 023870 72 -----LPGDQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 72 -----~~~~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+...+++++++|+|||||+|++.....
T Consensus 172 ~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 172 ITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 223789999999999999999887643
No 180
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.84 E-value=4.1e-05 Score=65.98 Aligned_cols=90 Identities=10% Similarity=0.097 Sum_probs=68.0
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-C-CCCCceeEEEec
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-P-VESFSIDTVLSI 66 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p-~~~~sfD~V~s~ 66 (276)
..+.+||.++.|.+.....+. +.|++.|+++....+. ++.++.+|+... + ..+++||+|++.
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 467889999988875433222 7888888888776664 599999999764 4 447899999976
Q ss_pred cccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 67 SSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 67 ~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.. ... ..++++++++|||||+|++.+..
T Consensus 150 ~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 150 AA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp TT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred Cc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 43 333 67999999999999999986543
No 181
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.84 E-value=6.3e-05 Score=66.99 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=67.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh-----CCCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~-----~~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
..+.+||+++.|.+.-+..+. +.|++.|++.... ...++.++.+|+.. ++...++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 356789999988865433332 7888888876532 24568999999865 444567999999
Q ss_pred eccccccCC-----hHHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SISSSHELP-----GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~~l~~~~-----~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+....++.+ ..+++++++|+|||||.|++....
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 965443322 268999999999999999988644
No 182
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.84 E-value=4e-05 Score=71.89 Aligned_cols=95 Identities=18% Similarity=0.028 Sum_probs=63.9
Q ss_pred CCcEEEEccCCCCcHHHHHHHHHHHHHHhhhh-----CCCCeEEEeccCC------------------------------
Q 023870 7 QSAVLALSEDKILPVSAVLNAIRDLGDEAVEQ-----CDPQIITQASSLS------------------------------ 51 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~-----~~~~v~~~~~d~~------------------------------ 51 (276)
.-++++++.+.+.+.-.++..|++..+++... ..+.+.+...|+-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 35678899888877666667777766554322 1122333333322
Q ss_pred ---------CCCCCCCceeEEEeccccccCCh-HH------------------------H---------------HHHHH
Q 023870 52 ---------QLPVESFSIDTVLSISSSHELPG-DQ------------------------L---------------LEEIS 82 (276)
Q Consensus 52 ---------~lp~~~~sfD~V~s~~~l~~~~~-~~------------------------~---------------l~ei~ 82 (276)
.-.||+++||+|+|++++||+.. +. + |+-.+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24578999999999999999764 21 1 44558
Q ss_pred HhccCCcEEEEEecCCCCc
Q 023870 83 RVLKPGGTILIYKKLTSDK 101 (276)
Q Consensus 83 rvLKPgG~l~i~~~~~~~~ 101 (276)
|.|+|||++++...+.++.
T Consensus 213 ~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHEEEEEEEEEEEECCCTT
T ss_pred HHhccCCeEEEEEecCCCc
Confidence 9999999999999887654
No 183
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.82 E-value=5.7e-05 Score=64.51 Aligned_cols=89 Identities=10% Similarity=0.109 Sum_probs=66.4
Q ss_pred CCCCCCcEEEEccCCCCcHHHH--------------------HHHHHHHHHHhhhhCC------CCeEEEeccCCCCCCC
Q 023870 3 TGKMQSAVLALSEDKILPVSAV--------------------LNAIRDLGDEAVEQCD------PQIITQASSLSQLPVE 56 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v--------------------~~~m~~~A~~~~~~~~------~~v~~~~~d~~~lp~~ 56 (276)
.++.|.+||.++.|.+.-...+ .+.|++.|+++....+ .++.+..+|+.. +++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC
Confidence 3678999999998876432211 1456677776654432 458899999877 555
Q ss_pred C-CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 57 S-FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 57 ~-~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
. ++||+|++...++++. .++++.|||||+|++....
T Consensus 160 ~~~~fD~I~~~~~~~~~~-----~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDTP-----TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCSEEEEEECSCBSSCC-----HHHHHTEEEEEEEEEEESC
T ss_pred cCCCccEEEECCchHHHH-----HHHHHHhcCCCEEEEEEec
Confidence 5 7899999998888764 7899999999999998764
No 184
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.80 E-value=4.9e-05 Score=64.68 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=68.1
Q ss_pred CCCCCCcEEEEccCCCCcHHHH-------------------HHHHHHHHHHhhhhCC------CCeEEEeccCCCCC---
Q 023870 3 TGKMQSAVLALSEDKILPVSAV-------------------LNAIRDLGDEAVEQCD------PQIITQASSLSQLP--- 54 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v-------------------~~~m~~~A~~~~~~~~------~~v~~~~~d~~~lp--- 54 (276)
.++.|.+||.++.|.+.....+ .+.|++.|+++....+ .++.++.+|+....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 3678999999998876432211 1566777777665544 35899999998765
Q ss_pred -CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 55 -VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 55 -~~~~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+..++||+|++...++++ +.+++++|||||+|++..+.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~-----~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL-----PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC-----CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH-----HHHHHHhcCCCcEEEEEEcc
Confidence 667899999998887765 47889999999999988764
No 185
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.80 E-value=1.1e-05 Score=68.78 Aligned_cols=91 Identities=11% Similarity=-0.010 Sum_probs=69.8
Q ss_pred CCCCCcEEEEccCCCCcHHH--------------HHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSA--------------VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~--------------v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+.+.++||+++.|.+.-+-. +.+.|++++++++...+....+..++.... .+..+||+|++...+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKML 125 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCH
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHH
Confidence 46688999999998633222 238999999999887776533333555443 567899999999999
Q ss_pred ccCCh-HHHHHHHHHhccCCcEEEEEe
Q 023870 70 HELPG-DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 70 ~~~~~-~~~l~ei~rvLKPgG~l~i~~ 95 (276)
|++.+ +..+..+++.|||||.|+-..
T Consensus 126 HlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred HhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 99954 667779999999999998776
No 186
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.80 E-value=5.6e-05 Score=71.94 Aligned_cols=92 Identities=15% Similarity=0.013 Sum_probs=63.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHH-------HHhhhhCC---CCeEEEeccCCCC--CC--
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLG-------DEAVEQCD---PQIITQASSLSQL--PV-- 55 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A-------~~~~~~~~---~~v~~~~~d~~~l--p~-- 55 (276)
++.|++||+++.|.+.-+..+. +.|++.| ++++...+ .++.+++++.... ++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 5678999999999875422221 2244444 77766655 4588887754322 23
Q ss_pred CCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 56 ESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 56 ~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
..++||+|++++.+ +.++ ..+|++++|+|||||+|++.+.
T Consensus 320 ~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 320 LIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred ccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 25789999987655 3344 7789999999999999998864
No 187
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.80 E-value=7e-05 Score=68.80 Aligned_cols=92 Identities=17% Similarity=0.177 Sum_probs=66.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh-----CCCCeEEEeccCCCC--CCCCCceeE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ-----CDPQIITQASSLSQL--PVESFSIDT 62 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~-----~~~~v~~~~~d~~~l--p~~~~sfD~ 62 (276)
.+.+.+||+|+.|.+.-+..+. +.|++.|+++... ...++.++.+|+... .+++++||+
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3566789999988875433322 7888888887643 245689999998653 245679999
Q ss_pred EEeccccccC--C---hHHHHHHHHHhccCCcEEEEEe
Q 023870 63 VLSISSSHEL--P---GDQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 63 V~s~~~l~~~--~---~~~~l~ei~rvLKPgG~l~i~~ 95 (276)
|++....++. . ...++++++|+|||||.|++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9986542211 1 2689999999999999999874
No 188
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.79 E-value=2.2e-05 Score=67.66 Aligned_cols=89 Identities=12% Similarity=0.115 Sum_probs=65.2
Q ss_pred CCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC---CeEEEeccCCCC-C-CCCCceeEEEe
Q 023870 6 MQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP---QIITQASSLSQL-P-VESFSIDTVLS 65 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~---~v~~~~~d~~~l-p-~~~~sfD~V~s 65 (276)
.+.+||.++.|.+.....+ .+.|++.|+++....+. ++.++.+|+.++ + +++++||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 3458999988876432222 27788888888776554 499999988654 3 44789999998
Q ss_pred ccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 66 ISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 66 ~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.... .. ..++++++|+|||||+|++.+..
T Consensus 136 d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 136 QVSP---MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp CCCT---TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred cCcH---HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6532 23 67899999999999999986543
No 189
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.78 E-value=4.4e-05 Score=66.56 Aligned_cols=90 Identities=12% Similarity=0.093 Sum_probs=66.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCC-CCCC--CCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQ-LPVE--SFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~-lp~~--~~sfD~V~ 64 (276)
..+.+||.|+.|.+.....+. +.|++.|++++...+. ++.++.+|+.. ++.. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 467899999988865432222 7788888887766554 48999999865 4433 34899999
Q ss_pred eccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+... ... ..++++++++|||||+|++.+..
T Consensus 142 ~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDAD---KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECSC---GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 8643 333 67999999999999999988754
No 190
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.77 E-value=0.00022 Score=67.79 Aligned_cols=95 Identities=19% Similarity=0.175 Sum_probs=68.4
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCC--CCCCceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP-QIITQASSLSQLP--VESFSIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp--~~~~sfD~V~s 65 (276)
++.|.+||++..|.+.-...+. +.+++.+++++...+. ++.++.+|+..++ +++++||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 4678899999888764322222 5567777777666665 5889999998876 66688999996
Q ss_pred c------cccccCCh-----------------HHHHHHHHHhccCCcEEEEEecCC
Q 023870 66 I------SSSHELPG-----------------DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 66 ~------~~l~~~~~-----------------~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
. ..++..++ ..+|.+++++|||||+|++++...
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 2 12222221 468999999999999999988654
No 191
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.76 E-value=6.2e-05 Score=64.45 Aligned_cols=91 Identities=14% Similarity=0.102 Sum_probs=67.5
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-CCC--CCceeEEEe
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-PVE--SFSIDTVLS 65 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p~~--~~sfD~V~s 65 (276)
..+.+||.++.|.+.....+. +.|++.|+++....+. ++.++.+++... +.. +++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 467899999988764422222 6777888877765554 489999998764 443 578999998
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 66 ISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 66 ~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
....+ ....+++++.++|||||+|++.+..
T Consensus 133 ~~~~~--~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 133 DAAKG--QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp EGGGS--CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred CCCHH--HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 76543 1278999999999999999998654
No 192
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.75 E-value=3.5e-05 Score=70.01 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=69.2
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh------CCCCeEEEeccCCC-CCCCCCceeEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ------CDPQIITQASSLSQ-LPVESFSIDTV 63 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~------~~~~v~~~~~d~~~-lp~~~~sfD~V 63 (276)
+.+.+||+|+.|.+.-+..+. +.|++.|+++... ...++.++.+|+.. ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 456789999988875433332 7788888876543 14568999999876 45557899999
Q ss_pred Eecccccc---CC-----hHHHHHHHHHhccCCcEEEEEecC
Q 023870 64 LSISSSHE---LP-----GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 64 ~s~~~l~~---~~-----~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
++....++ -+ ..+++++++|+|||||.|++....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99766554 21 268999999999999999987543
No 193
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.74 E-value=7.6e-05 Score=67.56 Aligned_cols=93 Identities=11% Similarity=0.119 Sum_probs=66.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh-----CCCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~-----~~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
+.+.+||+|+.|.+.-+..+. +.|++.|+++... ...++.++.+|+.. ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 567899999988865433332 7888888876543 24568999999865 455578999999
Q ss_pred eccccccCC-----hHHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SISSSHELP-----GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~~l~~~~-----~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+....++.+ ..+++++++|+|||||.|++....
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 865443322 257899999999999999988744
No 194
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.73 E-value=4.5e-05 Score=73.46 Aligned_cols=89 Identities=12% Similarity=0.118 Sum_probs=66.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
..+.+||+|+.|.+..+..+. ..|++.|++++...+. ++.++.+++.+++++ ++||+|++....+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 235 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchH
Confidence 457899999999875422221 2278888887766554 599999999998775 5899999977655
Q ss_pred cCC-h--HHHHHHHHHhccCCcEEEEE
Q 023870 71 ELP-G--DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 71 ~~~-~--~~~l~ei~rvLKPgG~l~i~ 94 (276)
++. . ...+.+++++|||||++++.
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 543 2 56777889999999999853
No 195
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.71 E-value=0.00011 Score=65.02 Aligned_cols=95 Identities=8% Similarity=0.054 Sum_probs=68.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCC----CCCceeEE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPV----ESFSIDTV 63 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~----~~~sfD~V 63 (276)
++.|.+||++..|.+.-...+. +.|++.+++++...+. ++.++.+|+..++. ..++||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 4678899999888764322222 5677777777766665 58899999987765 36789999
Q ss_pred Eecccccc------------------CCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 64 LSISSSHE------------------LPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 64 ~s~~~l~~------------------~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
++...... ... ..++.+++++|||||+|++++...
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 98532211 122 679999999999999999987653
No 196
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.69 E-value=0.00014 Score=65.44 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=64.5
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh-----CCCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~-----~~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
+.+.+||+++.|.+.-+..+. +.|++.|+++... ...++.++.+|+.. ++...++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 356789999988764333222 7788888776532 14568999999765 455567899999
Q ss_pred eccccccCC------hHHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SISSSHELP------GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~~l~~~~------~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+....+++. ..+++++++++|||||.|++....
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 854333221 268999999999999999998544
No 197
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.69 E-value=0.00025 Score=64.63 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=66.8
Q ss_pred CCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhh-----CCCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQ-----CDPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~-----~~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
+.+.+||+++.|.+.-+..+. +.|++.|+++... ...++.++.+|+.. ++..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 456789999988865433222 7888888887643 13568999999865 344467899999
Q ss_pred eccccccCC-----hHHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SISSSHELP-----GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~~l~~~~-----~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+....++-+ ..+++++++++|||||.|++....
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 865322211 168999999999999999997644
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.68 E-value=0.00015 Score=64.36 Aligned_cols=92 Identities=11% Similarity=0.040 Sum_probs=70.9
Q ss_pred CCCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.++.|.+||++..|.+.-+..+. +.|++.|++++...+. ++.++.+|+..++. .++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECC
Confidence 36788999999998875422221 7788888887766554 58899999988754 67899999876
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecCC
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.. ....++.++.+.|||||.++++.+..
T Consensus 195 p~---~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH---KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc---cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 53 22678999999999999999998764
No 199
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.65 E-value=4.3e-05 Score=63.20 Aligned_cols=92 Identities=15% Similarity=0.002 Sum_probs=59.7
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHHHHHHHH----------Hhhh------hC-CCCeEEE-eccCCCCC--------CC
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNAIRDLGD----------EAVE------QC-DPQIITQ-ASSLSQLP--------VE 56 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~m~~~A~----------~~~~------~~-~~~v~~~-~~d~~~lp--------~~ 56 (276)
.++.|.+||+++.|.+.-+. .+.+... .++- .. -..+.++ .+|+...+ ++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~----~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQ----VAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHH----HHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCCCCEEEEeCCCCCHHHH----HHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 46789999999999864222 2222211 1110 01 1236777 88876653 34
Q ss_pred CCceeEEEecccccc----CCh--------HHHHHHHHHhccCCcEEEEEecCC
Q 023870 57 SFSIDTVLSISSSHE----LPG--------DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 57 ~~sfD~V~s~~~l~~----~~~--------~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+++||+|++...+++ ..+ ..++++++|+|||||+|++..+..
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 568999998654433 222 278999999999999999998764
No 200
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.65 E-value=5.8e-05 Score=63.60 Aligned_cols=87 Identities=9% Similarity=0.036 Sum_probs=63.2
Q ss_pred CCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-CCCCCceeEEEecc
Q 023870 6 MQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-PVESFSIDTVLSIS 67 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p~~~~sfD~V~s~~ 67 (276)
.+.+||.++.|.+.....+. +.|++.|+++....+. ++.++.+++... +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 56788999888764432222 6778888777655443 488999988653 54456 99999864
Q ss_pred ccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 68 SSHELPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 68 ~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
. ... ..++++++++|||||+|++.+.
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 2 233 7899999999999999998664
No 201
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.63 E-value=0.00034 Score=66.07 Aligned_cols=95 Identities=14% Similarity=0.101 Sum_probs=68.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCC--CCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLP--VESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp--~~~~sfD~V~s~~ 67 (276)
.++|.+||++..+.+.-...+. +.+++.+++++...+..+.++.+|+..++ ++.++||+|++..
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 4678999999888864433333 34466677776666667888999998886 6678999999622
Q ss_pred ------ccccCCh-----------------HHHHHHHHHhccCCcEEEEEecCC
Q 023870 68 ------SSHELPG-----------------DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 68 ------~l~~~~~-----------------~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.++..++ ..++.+++++|||||+|++++-+-
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 2222222 378999999999999999988543
No 202
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.59 E-value=0.00045 Score=64.03 Aligned_cols=110 Identities=15% Similarity=0.026 Sum_probs=79.0
Q ss_pred CCCCCcEEEEccCCCCcHHH--------------HHHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSA--------------VLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~--------------v~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.+.|..||++..|.+.-+.. +.+.|++.|++++...+. .+.+.++|+.++++++++||+|+++.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 35788899998887643221 228889999988877776 68999999999999889999999976
Q ss_pred cccc-------CCh--HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhh
Q 023870 68 SSHE-------LPG--DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 68 ~l~~-------~~~--~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
.+.. +.. ..+++++.|+| +|.+++..... ..+.+.+...||.....
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~----------~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEK----------KAIEEAIAENGFEIIHH 349 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCH----------HHHHHHHHHTTEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCH----------HHHHHHHHHcCCEEEEE
Confidence 5432 112 56888899999 56665555431 14455677889986543
No 203
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.59 E-value=7.6e-05 Score=63.29 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=65.7
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-C-CCC----Ccee
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-P-VES----FSID 61 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p-~~~----~sfD 61 (276)
..+.+||.++.|.+.....+. +.|++.|+++....+. ++.++++++... + +.. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 467789999988865432222 7788888887766554 389999998543 3 221 7999
Q ss_pred EEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 62 TVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 62 ~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++... ... ..++.+++++|||||+|++.+..
T Consensus 143 ~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 143 LIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 9996542 233 77999999999999999998764
No 204
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.57 E-value=5.9e-05 Score=68.11 Aligned_cols=113 Identities=13% Similarity=-0.026 Sum_probs=70.7
Q ss_pred CCCCCCcEEEEccCCCCc---HHHHHHHHHHHHH--Hhhhh-----CCCCeEE-EeccCCCCCCCCCceeEEEecccccc
Q 023870 3 TGKMQSAVLALSEDKILP---VSAVLNAIRDLGD--EAVEQ-----CDPQIIT-QASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~---~~~v~~~m~~~A~--~~~~~-----~~~~v~~-~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
.++.|++||+++.|.+.. ...+ +.++.. .++-. .-.++.+ +++|+.+++++ ++||+|++....++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs~~---~a~~~~~~~~V~gvDis~~v~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~ 135 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGTAV---LRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTA-NKWDLIISDMYDPR 135 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHHH---HHHHSCTTCEEEEEESSCCBCSSSEEEESCGGGCCCS-SCEEEEEECCCCCC
T ss_pred CCCCCCEEEEeCCCCCCCCCcHHHH---HHHHcCCCCEEEEEECCCCCCCCEEEEECccccCCcc-CcccEEEEcCCccc
Confidence 468899999999965211 1111 111111 11100 0013668 99999988765 68999999654322
Q ss_pred -----------CCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 72 -----------LPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 72 -----------~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
... ..++++++|+|||||+|++..+...... .+...+...||..++..
T Consensus 136 ~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~-------~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 136 TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNA-------DLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp ---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCH-------HHHHHHTTEEEEEEEEE
T ss_pred cccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHH-------HHHHHHHHcCCcEEEEE
Confidence 111 4799999999999999999886643222 44456777888765543
No 205
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.55 E-value=9.1e-05 Score=62.78 Aligned_cols=91 Identities=10% Similarity=0.107 Sum_probs=65.2
Q ss_pred CCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC--CeEEEeccCCCC-C-CC---CCceeE
Q 023870 5 KMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP--QIITQASSLSQL-P-VE---SFSIDT 62 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p-~~---~~sfD~ 62 (276)
..+.+||.++.|.+.....+ .+.|++.|+++....+. ++.++.+|+... + ++ ..+||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 46788999988876442222 27788888887766554 489999998643 2 22 267999
Q ss_pred EEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 63 VLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 63 V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|++.....+ ...++++++++|||||.|++.+..
T Consensus 137 v~~d~~~~~--~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDADKQN--NPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSCGGG--HHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCCcHH--HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998654221 168999999999999999987654
No 206
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.55 E-value=0.00013 Score=66.83 Aligned_cols=116 Identities=11% Similarity=0.016 Sum_probs=75.4
Q ss_pred CCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhhCCC---CeEEEeccCCCCCC----CCCceeEEEe
Q 023870 5 KMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQCDP---QIITQASSLSQLPV----ESFSIDTVLS 65 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~~~~---~v~~~~~d~~~lp~----~~~sfD~V~s 65 (276)
..|.+||++..|.+.-+..+ .+.|++.|++++...+. ++.++++|+.++.. ...+||+|++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 35779999998887542222 27888888887765543 38999999876532 1568999998
Q ss_pred cccc----------ccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 66 ISSS----------HELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 66 ~~~l----------~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
.... ++..+ ..++.++.++|||||.|++........ ......+.+...+..+|+.
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~-~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA-SFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS-CHHHHHHHHHHHTTTSCSE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC-CHHHHHHHHHHHHHHcCCe
Confidence 4321 12233 689999999999999988776553221 1111122444455667775
No 207
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.50 E-value=0.00052 Score=59.88 Aligned_cols=114 Identities=15% Similarity=0.046 Sum_probs=83.4
Q ss_pred CCCCCCCcEEEEccCCCC-cHH-------------HHHHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEe
Q 023870 2 DTGKMQSAVLALSEDKIL-PVS-------------AVLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLS 65 (276)
Q Consensus 2 ~~~~~g~~vL~v~~~~~~-~~~-------------~v~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s 65 (276)
..++.|.+|++|+.|.+. ++. ++.+.+++.|++++...+. ++.+.++|+.+...+.+.||+|+.
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 17 NYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred HhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEE
Confidence 357889999999888863 322 1127888999988877765 499999999876655558999875
Q ss_pred ccccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 66 ISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 66 ~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
....- .. ..++.+..+.|+++|+|+++.... ...+++.|..+||.-++..
T Consensus 97 aGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~~---------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 97 CGMGG--RLIADILNNDIDKLQHVKTLVLQPNNR---------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp EEECH--HHHHHHHHHTGGGGTTCCEEEEEESSC---------HHHHHHHHHHTTEEEEEEE
T ss_pred eCCch--HHHHHHHHHHHHHhCcCCEEEEECCCC---------hHHHHHHHHHCCCEEEEEE
Confidence 43211 11 568888999999999999887541 1267788999999876544
No 208
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.50 E-value=0.0015 Score=56.34 Aligned_cols=89 Identities=10% Similarity=0.051 Sum_probs=57.8
Q ss_pred CCCcEEEEccCCCCcHHHH--------------HHHHHHHHHHhhhhCCC--CeEEEeccCCCC---CCC---CCceeEE
Q 023870 6 MQSAVLALSEDKILPVSAV--------------LNAIRDLGDEAVEQCDP--QIITQASSLSQL---PVE---SFSIDTV 63 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v--------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~l---p~~---~~sfD~V 63 (276)
.+.+||+++.|.+.-...+ .+.|++.|++++...+. ++.++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5779999999987432211 17888999888766554 389999998762 455 3689999
Q ss_pred EeccccccCC---------------h-HHHHHHHHHhccCCcEEEEE
Q 023870 64 LSISSSHELP---------------G-DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 64 ~s~~~l~~~~---------------~-~~~l~ei~rvLKPgG~l~i~ 94 (276)
+++..+++.. + ..++.+++|+|||||.+.+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9985554332 1 24567778888888776544
No 209
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.47 E-value=5.9e-05 Score=73.89 Aligned_cols=92 Identities=11% Similarity=0.033 Sum_probs=73.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC-CCeEEEeccCCCC--CCCCCceeEEEecccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD-PQIITQASSLSQL--PVESFSIDTVLSISSS 69 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~-~~v~~~~~d~~~l--p~~~~sfD~V~s~~~l 69 (276)
..+.+||+|+.|.+.-+..|. +.|++.|+.++...+ .++.|.+++++++ ++.+++||+|++..++
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 456799999999986544443 888999988776655 5799999999988 5778899999999999
Q ss_pred ccCChH---HHHHHHHHhccCCcEEEEEec
Q 023870 70 HELPGD---QLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 70 ~~~~~~---~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+|+++. ..+..+++.|+++|+.++...
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEe
Confidence 999872 334567788889888777654
No 210
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.45 E-value=0.00028 Score=62.98 Aligned_cols=87 Identities=15% Similarity=0.102 Sum_probs=63.4
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC--CCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD--PQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~--~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
++.+++||.++.|.+.-...+. +.|++.++++....+ .++.++++|+..++++ +||+|+++..+
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy 103 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPY 103 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCG
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCc
Confidence 4678899999999886544333 778888887765443 3589999999988876 79999998776
Q ss_pred ccCCh--HHHH--------------HHH--HHhccCCcEEE
Q 023870 70 HELPG--DQLL--------------EEI--SRVLKPGGTIL 92 (276)
Q Consensus 70 ~~~~~--~~~l--------------~ei--~rvLKPgG~l~ 92 (276)
++..+ ..++ +|+ +++|||||.++
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 104 QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 66443 2333 233 36899999875
No 211
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.45 E-value=0.00066 Score=60.26 Aligned_cols=118 Identities=12% Similarity=0.034 Sum_probs=72.4
Q ss_pred CCCCcEEEEccCCCCcHH-------------HH-HHHHHHHHHHhh-----hhCCC------CeEEEeccCCCC--CC--
Q 023870 5 KMQSAVLALSEDKILPVS-------------AV-LNAIRDLGDEAV-----EQCDP------QIITQASSLSQL--PV-- 55 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~-------------~v-~~~m~~~A~~~~-----~~~~~------~v~~~~~d~~~l--p~-- 55 (276)
..|.+||.++.|.+..+. ++ .+.|++.|++++ ...+. ++.+...+..+. .+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 467889999888764321 22 367788887766 33222 466664443331 12
Q ss_pred --CCCceeEEEeccccccCCh-HHHHHHHHHhcc---C--CcEEEEEecCCCCchhHHHHHHHHHHHHHHCC-Ccchh
Q 023870 56 --ESFSIDTVLSISSSHELPG-DQLLEEISRVLK---P--GGTILIYKKLTSDKGDVDKAISALEGKLLLAG-FLDAQ 124 (276)
Q Consensus 56 --~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLK---P--gG~l~i~~~~~~~~~~~~~~~~~l~~~l~laG-F~~v~ 124 (276)
+..+||+|++...+++.+. ..+++++.++|| | ||++++....... .+......+...+..+| |....
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~--~~~~~~~~~~~~l~~~G~f~v~~ 233 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRP--HLAERDLAFFRLVNADGALIAEP 233 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC----------CTHHHHHHHHSTTEEEEE
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec--ccchhHHHHHHHHHhcCCEEEEE
Confidence 4678999999888888776 889999999999 9 9988765432110 00011123445677889 87543
No 212
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.45 E-value=0.00028 Score=65.94 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=61.6
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccc--
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISS-- 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~-- 68 (276)
.|..||+|+.|.++-+ -+. ..|.+.|++.+...+. .|.++.++++.+.++ +.||+|++...
T Consensus 83 ~~k~VLDvG~GtGiLs-~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILS-IFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHH-HHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHH-HHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 5788999999986431 111 2256667766655543 499999999999887 68999998433
Q ss_pred -cccCCh-HHHHHHHHHhccCCcEEEE
Q 023870 69 -SHELPG-DQLLEEISRVLKPGGTILI 93 (276)
Q Consensus 69 -l~~~~~-~~~l~ei~rvLKPgG~l~i 93 (276)
+.+-.. ..++....|.|||||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 222222 7888889999999999863
No 213
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.44 E-value=0.0025 Score=52.95 Aligned_cols=106 Identities=12% Similarity=0.003 Sum_probs=74.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
..|.+||.++.|.+.-...+. +.|++.++++....+.++.++++|+.+++ .+||+|++...+++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 468899999998875432222 77888888877666667899999998875 48999999888777
Q ss_pred CCh---HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 72 LPG---DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 72 ~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
... ..+++++.++| ||.+++. ... . ...+.+...+...||..
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~-~~~---~---~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIH-LAK---P---EVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEE-ECC---H---HHHHHHHHHHHHTTEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEE-eCC---c---CCHHHHHHHHHHCCCeE
Confidence 652 68899999999 5544433 211 1 11224555677788853
No 214
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.44 E-value=0.0003 Score=63.47 Aligned_cols=113 Identities=10% Similarity=0.020 Sum_probs=68.4
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEE-EeccCCCCC---CCCCceeEEEeccc
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIIT-QASSLSQLP---VESFSIDTVLSISS 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~-~~~d~~~lp---~~~~sfD~V~s~~~ 68 (276)
.|..||+++.|.+.-...+. ..|++.+.++ ..++.. ...++..++ ++..+||+|++..+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CcccceecccCceecchhhCCCCCCCEEEEEee
Confidence 57789999999874322221 3344332211 123322 223443333 34557999998777
Q ss_pred cccCChHHHHHHHHHhccCCcEEEEE---ecCCC--------Cch-h--HHHHHHHHHHHHHHCCCcchh
Q 023870 69 SHELPGDQLLEEISRVLKPGGTILIY---KKLTS--------DKG-D--VDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 69 l~~~~~~~~l~ei~rvLKPgG~l~i~---~~~~~--------~~~-~--~~~~~~~l~~~l~laGF~~v~ 124 (276)
++++ ..+|.+++|+|||||+|++. .+..+ ... . -+...+.+...+..+||....
T Consensus 161 f~sl--~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 161 FISL--NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKG 228 (291)
T ss_dssp SSCG--GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred HhhH--HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 6654 67999999999999999987 22211 100 0 123455677788999998544
No 215
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.43 E-value=0.00012 Score=63.83 Aligned_cols=90 Identities=12% Similarity=0.050 Sum_probs=63.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-CCC-----CCcee
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-PVE-----SFSID 61 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p~~-----~~sfD 61 (276)
..+.+||.++.|.+.....+. +.|++.|+++....+. ++.++++|+... +.. .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 356789999988875433232 3444555665555443 589999998654 321 57999
Q ss_pred EEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 62 TVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 62 ~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++... ... ..++++++++|||||+|++.+..
T Consensus 139 ~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 139 FIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 9998653 233 67899999999999999997654
No 216
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.43 E-value=0.00068 Score=65.21 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=66.5
Q ss_pred CCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCCC-CCCceeEEEecc
Q 023870 5 KMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLPV-ESFSIDTVLSIS 67 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~-~~~sfD~V~s~~ 67 (276)
+.|.+||++..+.+.-...+ .+.|++.+++++...+. ++.++++|+..++. ..++||+|++..
T Consensus 116 ~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 116 NAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 38899999988775321111 26777888777766555 58899999988764 567899999721
Q ss_pred ------cccc-------CC--------h--HHHHHHHHHhccCCcEEEEEecCC
Q 023870 68 ------SSHE-------LP--------G--DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 68 ------~l~~-------~~--------~--~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.++. +. . ..+|.+++++|||||+|++++-+-
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 1111 11 1 368999999999999999987653
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.43 E-value=0.0002 Score=63.74 Aligned_cols=92 Identities=11% Similarity=0.090 Sum_probs=64.9
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhh----h-------CCCCeEEEeccCCC-CCCCCCc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVE----Q-------CDPQIITQASSLSQ-LPVESFS 59 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~----~-------~~~~v~~~~~d~~~-lp~~~~s 59 (276)
+.+.+||+++.|.+.-+..+. +.|++.|+++.. - ...++.++.+|+.. ++. +++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 456789999988764333222 778888887661 1 23568899998754 333 678
Q ss_pred eeEEEeccccccCC-----hHHHHHHHHHhccCCcEEEEEecC
Q 023870 60 IDTVLSISSSHELP-----GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 60 fD~V~s~~~l~~~~-----~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
||+|++....++.+ ..+++++++++|+|||.|++....
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99999865543221 267899999999999999987543
No 218
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.40 E-value=0.00014 Score=65.03 Aligned_cols=93 Identities=18% Similarity=0.130 Sum_probs=59.9
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHH----------HHHHHHHhh-h--hCCCCeEEE--eccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNA----------IRDLGDEAV-E--QCDPQIITQ--ASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~----------m~~~A~~~~-~--~~~~~v~~~--~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.+++|.+||+++.|.+.-...+... |...++++. . ..+.++.++ ++|+..+| +++||+|++..
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 3578999999998886432211111 111111110 0 011157888 88998876 78999999976
Q ss_pred ccccCC----h-H---HHHHHHHHhccCCc--EEEEEecCC
Q 023870 68 SSHELP----G-D---QLLEEISRVLKPGG--TILIYKKLT 98 (276)
Q Consensus 68 ~l~~~~----~-~---~~l~ei~rvLKPgG--~l~i~~~~~ 98 (276)
+ ++.. + . .+|.+++|+||||| .|++..+.+
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 6 3322 1 1 37899999999999 999988764
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.38 E-value=0.00031 Score=60.40 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=63.9
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCC----CCCCC--Ccee
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQ----LPVES--FSID 61 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~----lp~~~--~sfD 61 (276)
..+.+||.++.|.+.....+. +.+++.|+++....+. ++.++.+++.+ ++..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 356789999888764322222 6777888776655444 48899898643 33334 7899
Q ss_pred EEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 62 TVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 62 ~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++... ..+ ..++.++.++|||||+|++.+..
T Consensus 151 ~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 151 LIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 9997653 233 78999999999999999997654
No 220
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.37 E-value=0.00011 Score=63.92 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=61.6
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhh----CCCCeEEEe-ccCCCCCCCCCceeEEEecc
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQ----CDPQIITQA-SSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~----~~~~v~~~~-~d~~~lp~~~~sfD~V~s~~ 67 (276)
.|.+||+|+.|.+.-...+. +.|++.|+++... ...++.+.. .++....+...+||++++..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l 116 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL 116 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH
Confidence 46789999999875432222 3344444332211 011122222 22222123445666665543
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEec---CCCC--------c-hh--HHHHHHHHHHHHHHCCCcchh
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKK---LTSD--------K-GD--VDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~---~~~~--------~-~~--~~~~~~~l~~~l~laGF~~v~ 124 (276)
..++++++|+|||||+|++... .... . .. -....+.+...+..+||....
T Consensus 117 -------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 117 -------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp -------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred -------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 5789999999999999998731 1110 0 00 112345677889999998644
No 221
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.37 E-value=0.00028 Score=60.66 Aligned_cols=89 Identities=13% Similarity=0.130 Sum_probs=64.0
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCC-CC------------
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQ-LP------------ 54 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~-lp------------ 54 (276)
..+.+||.++.|.+.....+. +.|++.|+++....+. ++.+..+++.. ++
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 467899999988764322222 6677778777665544 38888888754 22
Q ss_pred --CCC--CceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 55 --VES--FSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 55 --~~~--~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
|++ ++||+|++.... .. ..++.+++++|||||+|++.+.
T Consensus 139 ~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 232 789999987432 23 6889999999999999999874
No 222
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.36 E-value=0.00019 Score=62.65 Aligned_cols=89 Identities=11% Similarity=0.060 Sum_probs=65.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-C-C-----CCCce
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-P-V-----ESFSI 60 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p-~-----~~~sf 60 (276)
..+.+||.|+.+.+.....+. +.|++.|+++....+. ++.++.+++... + + +.++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 356789999888765432222 5677888887766654 589999988653 4 2 26799
Q ss_pred eEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 61 DTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 61 D~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
|+|++... ... ..++.+++++|||||+|++.+.
T Consensus 158 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 158 DFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp SEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 99998643 233 7899999999999999998764
No 223
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.31 E-value=0.00021 Score=60.63 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC--CCCC----Ccee
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQL--PVES----FSID 61 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l--p~~~----~sfD 61 (276)
..+.+||.++.|.+.....+. +.|++.|+++....+. ++.++.+++... .+.. ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 467789999888764432222 6677888777665553 589999987543 2222 7899
Q ss_pred EEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 62 TVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 62 ~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+|++... ... ..++.++.++|||||.+++.+..
T Consensus 148 ~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 148 VAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp EEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred EEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 9998653 223 68999999999999999997643
No 224
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.29 E-value=0.0004 Score=64.49 Aligned_cols=52 Identities=15% Similarity=0.066 Sum_probs=42.7
Q ss_pred cCCCCCCCCCceeEEEeccccccCCh-H---------------------------------HHHHHHHHhccCCcEEEEE
Q 023870 49 SLSQLPVESFSIDTVLSISSSHELPG-D---------------------------------QLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 49 d~~~lp~~~~sfD~V~s~~~l~~~~~-~---------------------------------~~l~ei~rvLKPgG~l~i~ 94 (276)
+...-.||+++||+|+|++++||+.. + .+|+..++.|+|||++++.
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 34446799999999999999999764 2 2388889999999999999
Q ss_pred ecCCCC
Q 023870 95 KKLTSD 100 (276)
Q Consensus 95 ~~~~~~ 100 (276)
..+.++
T Consensus 209 ~~gr~~ 214 (359)
T 1m6e_X 209 ILGRRS 214 (359)
T ss_dssp EEECSS
T ss_pred EecCCC
Confidence 887654
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.29 E-value=0.0011 Score=55.00 Aligned_cols=81 Identities=6% Similarity=-0.059 Sum_probs=57.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 5 KMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
..+.+||.++.|.+.-+..+. +.|++.|+++.. ++.++++|+..++ ++||+|++...+|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEIS---GKYDTWIMNPPFGS 122 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCC---CCEEEEEECCCC--
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCC---CCeeEEEECCCchh
Confidence 467899999999875422221 678888877653 6789999998875 68999999998888
Q ss_pred CCh---HHHHHHHHHhccCCcEEEEE
Q 023870 72 LPG---DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 72 ~~~---~~~l~ei~rvLKPgG~l~i~ 94 (276)
+.. ..+++++.++| |+.+++.
T Consensus 123 ~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 123 VVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp -----CHHHHHHHHHHE--EEEEEEE
T ss_pred ccCchhHHHHHHHHHhc--CcEEEEE
Confidence 864 67999999999 5544443
No 226
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.27 E-value=0.0011 Score=58.32 Aligned_cols=114 Identities=13% Similarity=0.073 Sum_probs=82.1
Q ss_pred CCCCCCCcEEEEccCCCC-cHH-------------HHHHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEe
Q 023870 2 DTGKMQSAVLALSEDKIL-PVS-------------AVLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLS 65 (276)
Q Consensus 2 ~~~~~g~~vL~v~~~~~~-~~~-------------~v~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s 65 (276)
+.++.|.+||+|+.|.+. ++. ++.+.+++.|++++...+. ++.+.++|+.+...+.+.||+|++
T Consensus 17 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 17 SYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp TTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred HhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEE
Confidence 357889999999888863 221 1127888999888877765 489999998776554456999886
Q ss_pred ccccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 66 ISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 66 ~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
....- .. ..++.+..+.|+++|+|+++-... . ..+++.|..+||.-++..
T Consensus 97 agmGg--~lI~~IL~~~~~~L~~~~~lIlq~~~~-----~----~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 97 AGMGG--TLIRTILEEGAAKLAGVTKLILQPNIA-----A----WQLREWSEQNNWLITSEA 147 (244)
T ss_dssp EEECH--HHHHHHHHHTGGGGTTCCEEEEEESSC-----H----HHHHHHHHHHTEEEEEEE
T ss_pred eCCch--HHHHHHHHHHHHHhCCCCEEEEEcCCC-----h----HHHHHHHHHCCCEEEEEE
Confidence 43211 11 567888999999999999987531 1 267778999999865543
No 227
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.25 E-value=0.00031 Score=58.99 Aligned_cols=91 Identities=13% Similarity=0.098 Sum_probs=58.8
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHHHHHHHHHhhhh-------CCCCeEEEeccCCCCCCC-----------CCceeEEE
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQ-------CDPQIITQASSLSQLPVE-----------SFSIDTVL 64 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~-------~~~~v~~~~~d~~~lp~~-----------~~sfD~V~ 64 (276)
.++.|++||+++.|.+.-. ..+.+. ..++-. ...++.++++|+.+.+.. .++||+|+
T Consensus 22 ~~~~g~~VLDlG~G~G~~s----~~la~~-~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 22 VVRKGDAVIEIGSSPGGWT----QVLNSL-ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp CSCTTCEEEEESCTTCHHH----HHHTTT-CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCCCCCEEEEEeecCCHHH----HHHHHc-CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 4688999999999886422 112111 111110 112478899999886521 14999999
Q ss_pred eccccccC----Ch--------HHHHHHHHHhccCCcEEEEEecCC
Q 023870 65 SISSSHEL----PG--------DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 65 s~~~l~~~----~~--------~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+....... .+ ..++..+.++|||||.|++..+..
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 96532211 11 467888999999999999988753
No 228
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.25 E-value=0.0049 Score=55.63 Aligned_cols=93 Identities=16% Similarity=0.192 Sum_probs=67.4
Q ss_pred CCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhh------hCCCCeEEEeccCCC-CCCCCCceeEEE
Q 023870 6 MQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVE------QCDPQIITQASSLSQ-LPVESFSIDTVL 64 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~------~~~~~v~~~~~d~~~-lp~~~~sfD~V~ 64 (276)
.-.+||+|+.|.+.-++.+. +.+++.+++... ..++++..+.+|+-. +.-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 34689999998876666555 777888876542 235678988898864 445678999999
Q ss_pred eccc-----cccCChHHHHHHHHHhccCCcEEEEEecCC
Q 023870 65 SISS-----SHELPGDQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 65 s~~~-----l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.=.. ...+-..++++.++|+|+|||.++.+..++
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 7332 112234789999999999999999876544
No 229
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.23 E-value=0.0003 Score=60.91 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=39.7
Q ss_pred EEeccCCCCCC-----CCCceeEEEeccccccCCh----------HHHHHHHHHhccCCcEEEEEecC
Q 023870 45 TQASSLSQLPV-----ESFSIDTVLSISSSHELPG----------DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 45 ~~~~d~~~lp~-----~~~sfD~V~s~~~l~~~~~----------~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+.++|+.+... ...+||+|+++..++.... ..++++++++|||||+|++....
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 88899876321 4458999999765543321 58999999999999999985443
No 230
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.21 E-value=0.00051 Score=59.38 Aligned_cols=89 Identities=11% Similarity=0.050 Sum_probs=65.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC--CeEEEeccCCCC-C-C-----CCCce
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP--QIITQASSLSQL-P-V-----ESFSI 60 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~l-p-~-----~~~sf 60 (276)
..+.+||.++.+.+.....+. +.|++.|+++....+. ++.++.+|+... + + +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 356789999888875433232 6678888887766655 488999988653 3 2 25789
Q ss_pred eEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 61 DTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 61 D~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
|+|++... ... ..++++++++|||||.|++.+.
T Consensus 149 D~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99997632 223 7899999999999999998764
No 231
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.20 E-value=0.00067 Score=65.05 Aligned_cols=95 Identities=20% Similarity=0.083 Sum_probs=67.1
Q ss_pred CCCCCcEEEEccCCCCcHHH---------------HHHHHHHHHHHhhhhCCCCeEEEeccCCCCC-CCCCceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSA---------------VLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~---------------v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp-~~~~sfD~V~s~~ 67 (276)
++.|.+||++..+.+.-... +.+.|++.+++++...+..+.++.+|+..++ +..++||+|++..
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~ 178 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDA 178 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEEC
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECC
Confidence 46789999998887532111 1267788888877766666888899988776 3567999999621
Q ss_pred c------cccCC----------------h-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 68 S------SHELP----------------G-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 68 ~------l~~~~----------------~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
. ++..+ . ..+|.+++++|||||+|++++-+-
T Consensus 179 PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 179 PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 1 11111 1 568999999999999999887543
No 232
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.19 E-value=0.0021 Score=55.84 Aligned_cols=114 Identities=14% Similarity=0.070 Sum_probs=79.7
Q ss_pred CCCCCCCcEEEEccCCCC-cHH-------------HHHHHHHHHHHHhhhhCCC--CeEEEeccCC-CCCCCCCceeEEE
Q 023870 2 DTGKMQSAVLALSEDKIL-PVS-------------AVLNAIRDLGDEAVEQCDP--QIITQASSLS-QLPVESFSIDTVL 64 (276)
Q Consensus 2 ~~~~~g~~vL~v~~~~~~-~~~-------------~v~~~m~~~A~~~~~~~~~--~v~~~~~d~~-~lp~~~~sfD~V~ 64 (276)
..++.|.+||+|+.|.+. ++. ++.+.+++.|++++...+. ++.+.++|+. .++. ...||+|+
T Consensus 11 ~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~-~~~~D~Iv 89 (225)
T 3kr9_A 11 SFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE-TDQVSVIT 89 (225)
T ss_dssp TTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-GGCCCEEE
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc-CcCCCEEE
Confidence 357889999999888863 221 1117888889888877765 4899999984 4432 22699988
Q ss_pred eccccccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 65 SISSSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 65 s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
....--.+ -..++.+..+.|+|+|+|+++... .. ..+...|..+||.-++..
T Consensus 90 iaG~Gg~~-i~~Il~~~~~~L~~~~~lVlq~~~-----~~----~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 90 IAGMGGRL-IARILEEGLGKLANVERLILQPNN-----RE----DDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp EEEECHHH-HHHHHHHTGGGCTTCCEEEEEESS-----CH----HHHHHHHHHTTEEEEEEE
T ss_pred EcCCChHH-HHHHHHHHHHHhCCCCEEEEECCC-----CH----HHHHHHHHHCCCEEEEEE
Confidence 64321100 157889999999999999987653 11 266778999999876553
No 233
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.18 E-value=0.00057 Score=60.46 Aligned_cols=86 Identities=15% Similarity=0.110 Sum_probs=62.7
Q ss_pred CCCCcEEEEccCCCCcHHHH------------HHHHHHHHHHhhhh-----CCCCeEEEeccCCCCCCCCCceeEEEecc
Q 023870 5 KMQSAVLALSEDKILPVSAV------------LNAIRDLGDEAVEQ-----CDPQIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v------------~~~m~~~A~~~~~~-----~~~~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
+.+.+||+++.|.+.-++.+ .+.|++.|+++... .+.++.++.+|+.... ++||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 45678999999876443322 26788888765432 2456889999987754 7899999863
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
. ....++++++|+|||||.|++....
T Consensus 148 ~----dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 148 E----PDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp C----CCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred C----ChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2 1245899999999999999987544
No 234
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.16 E-value=0.00022 Score=64.55 Aligned_cols=94 Identities=12% Similarity=0.017 Sum_probs=58.9
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHH--HHH--H----HHH---hh--hhCC-CCeEEEec-cCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNA--IRD--L----GDE---AV--EQCD-PQIITQAS-SLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~--m~~--~----A~~---~~--~~~~-~~v~~~~~-d~~~lp~~~~sfD~V~s~~ 67 (276)
.+++|.+||+++.|.+.-...+... +.. . ... .. ...+ ..+.++++ |+..++ .++||+|++..
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~ 156 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDI 156 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEECC
Confidence 4678999999999886432222211 000 0 000 00 0111 24788888 777665 56999999976
Q ss_pred ccc---cCCh-H---HHHHHHHHhccCCcEEEEEecCC
Q 023870 68 SSH---ELPG-D---QLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 68 ~l~---~~~~-~---~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+.+ +..+ . .+|.+++|+|||||.|++..+..
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 543 3323 2 47899999999999999987754
No 235
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.13 E-value=0.00058 Score=59.14 Aligned_cols=85 Identities=9% Similarity=0.025 Sum_probs=58.1
Q ss_pred CCCcEEEEccCCCCcHHHHHHHH------------------HHHHHHhhhhCCCCeEEEeccCCCC---CCCC-CceeEE
Q 023870 6 MQSAVLALSEDKILPVSAVLNAI------------------RDLGDEAVEQCDPQIITQASSLSQL---PVES-FSIDTV 63 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~~~m------------------~~~A~~~~~~~~~~v~~~~~d~~~l---p~~~-~sfD~V 63 (276)
.+.+||.|+.|.+.....+...+ ++.|+ ....++.++++|+.++ ++.. .+||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 46789999999875433332221 11111 1134689999999884 6544 479999
Q ss_pred EeccccccCChHHHHHHHHH-hccCCcEEEEEec
Q 023870 64 LSISSSHELPGDQLLEEISR-VLKPGGTILIYKK 96 (276)
Q Consensus 64 ~s~~~l~~~~~~~~l~ei~r-vLKPgG~l~i~~~ 96 (276)
++... | .....++.+++| +|||||+|++.+.
T Consensus 157 ~~d~~-~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 157 FIDNA-H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEESS-C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EECCc-h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 97654 3 233789999998 9999999999764
No 236
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.09 E-value=0.0022 Score=59.67 Aligned_cols=114 Identities=13% Similarity=0.033 Sum_probs=76.0
Q ss_pred CCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC---CeEEEeccCCCCCC----CCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP---QIITQASSLSQLPV----ESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~---~v~~~~~d~~~lp~----~~~sfD~V~ 64 (276)
..|.+||.+..|.+.-+-.+ .+.+++.|++++...+. ++.++++|+..+.. ...+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46788999988887542222 17788888887776665 68999999876521 146899999
Q ss_pred ecccc---------ccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCC
Q 023870 65 SISSS---------HELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGF 120 (276)
Q Consensus 65 s~~~l---------~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF 120 (276)
+.-.. +.... ..++.++.++|+|||.|+++........ ......+...+..+|+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~i~~~~~~~g~ 362 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTS--DLFQKIIADAAIDAGR 362 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH--HHHHHHHHHHHHHHTC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH--HHHHHHHHHHHHHcCC
Confidence 86432 11234 6789999999999999999886543211 1112234445666664
No 237
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.07 E-value=0.0024 Score=56.86 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=63.7
Q ss_pred CCCcEEEEccCCCCcHHH-------------HHHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCce---eEEEecc
Q 023870 6 MQSAVLALSEDKILPVSA-------------VLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSI---DTVLSIS 67 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~-------------v~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sf---D~V~s~~ 67 (276)
.+.+||+++.|.+..+.. +.+.|++.|++++...+. ++.++++|+.+ +++ ++| |+|+++-
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 567899999888754221 227888888888776665 38999999976 333 479 9999973
Q ss_pred ccc-----------cCCh---------HHHHHHHH-HhccCCcEEEEEe
Q 023870 68 SSH-----------ELPG---------DQLLEEIS-RVLKPGGTILIYK 95 (276)
Q Consensus 68 ~l~-----------~~~~---------~~~l~ei~-rvLKPgG~l~i~~ 95 (276)
.+. |.+. ..+++++. +.|+|||.|++..
T Consensus 201 Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 201 PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 221 2211 27899999 9999999999854
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.05 E-value=0.0015 Score=60.76 Aligned_cols=94 Identities=11% Similarity=-0.067 Sum_probs=67.5
Q ss_pred CCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC--CeEEEeccCCCCCC----CCCceeEEEe
Q 023870 5 KMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP--QIITQASSLSQLPV----ESFSIDTVLS 65 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~----~~~sfD~V~s 65 (276)
+.|.+||.+..|.+.-+..+ .+.|++.|++++...+. ++.++++|+..+.. ...+||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 47889999988876432211 17788888887766665 68999999876532 2578999998
Q ss_pred cccccc---------CCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 66 ISSSHE---------LPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 66 ~~~l~~---------~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.-.... ... ..++.++.++|+|||.|++.....
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 543211 123 678899999999999999888664
No 239
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.04 E-value=0.0021 Score=58.60 Aligned_cols=90 Identities=11% Similarity=0.114 Sum_probs=67.3
Q ss_pred CCCCCcEEEEccCCCCcHH-----------HHHHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVS-----------AVLNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~-----------~v~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.|.+||++..|.+.-+. ++.+.+++.|++++...+. ++.++++|+.+.. .+||+|++.....
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred cCCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 4578899999888763311 1227788888887766554 5899999998775 7999999864322
Q ss_pred cCChHHHHHHHHHhccCCcEEEEEecCCC
Q 023870 71 ELPGDQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 71 ~~~~~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
...++.++.++|+|||.|++.+....
T Consensus 270 ---~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 270 ---AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ---GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 14789999999999999999887653
No 240
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.03 E-value=0.0008 Score=64.35 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=65.9
Q ss_pred CCCCCcEEEEccCCCCcHHHH---------------HHHHHHHHHHhhhhCCC-CeEEEeccCCCCC-CCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAV---------------LNAIRDLGDEAVEQCDP-QIITQASSLSQLP-VESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v---------------~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp-~~~~sfD~V~s~ 66 (276)
++.|++||++..+.+.-.-.+ .+.+++.+++++...+. ++.++.+|+..++ +.+++||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 467899999988776321111 16667777777766665 4888888888765 346799999974
Q ss_pred cc------cccCC---------------h--HHHHHHHHHhccCCcEEEEEecCC
Q 023870 67 SS------SHELP---------------G--DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 67 ~~------l~~~~---------------~--~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
.. +..-+ . ..+|.+++++|||||+|+.++-+-
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 32 11100 1 278999999999999999887543
No 241
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.00 E-value=0.002 Score=60.32 Aligned_cols=95 Identities=12% Similarity=-0.106 Sum_probs=65.7
Q ss_pred CCCCCcEEEEccCCCCcHHH------------HHHHHHHHHHHhhhhCCCCeEEEeccCCCC-CCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSA------------VLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~------------v~~~m~~~A~~~~~~~~~~v~~~~~d~~~l-p~~~~sfD~V~s~~~l~ 70 (276)
+++|.+||++..+.+.-+-. +.+.|++.|++++...+....+.++|+.++ +...+.||+|++.....
T Consensus 212 ~~~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 212 VRPGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp CCTTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred hcCCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 45699999999888643221 227888888888776666556668887654 22233499999864321
Q ss_pred c---------CCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 71 E---------LPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 71 ~---------~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
. ... ..++.++.++|||||.|++.+...
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1 112 578899999999999999777654
No 242
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.00 E-value=0.001 Score=61.94 Aligned_cols=115 Identities=14% Similarity=0.070 Sum_probs=74.9
Q ss_pred CCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCC---CeEEEeccCCC-CCC---CCCceeEEE
Q 023870 5 KMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDP---QIITQASSLSQ-LPV---ESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~---~v~~~~~d~~~-lp~---~~~sfD~V~ 64 (276)
..|.+||++..|.+.-+-.+ .+.|++.|++++...+. ++.++++|+.. ++. ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 56889999988886432211 16678888887766554 68999999865 331 245899999
Q ss_pred ecccc-----ccCC----h-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 65 SISSS-----HELP----G-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 65 s~~~l-----~~~~----~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
+.-.. .... . ..++.++.++|+|||.|++........ ....++.+...+..+|+.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~--~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT--VSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC--HHHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC--HHHHHHHHHHHHHHcCCc
Confidence 84332 1222 2 457788899999999999988664321 122233444556666665
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.97 E-value=0.004 Score=54.89 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=70.3
Q ss_pred CCCCcEEEEccCCCCcHHH------------HHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccC
Q 023870 5 KMQSAVLALSEDKILPVSA------------VLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHEL 72 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~------------v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~ 72 (276)
.+..+||+++.|.. |... +...|++.+++.....+....+.++|....+++. +||+|+++-++|++
T Consensus 104 ~~p~~VLDlGCG~g-pLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLN-PLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTT-HHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCcc-HHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHh
Confidence 45679999999875 3332 2388999998888777888899999998888655 99999999999998
Q ss_pred Ch--HHHHHHHHHhccCCcEEEEEe
Q 023870 73 PG--DQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 73 ~~--~~~l~ei~rvLKPgG~l~i~~ 95 (276)
.. +...-.+...|+++|.++-..
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEcC
Confidence 75 333448999999998887665
No 244
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.92 E-value=0.0025 Score=59.06 Aligned_cols=93 Identities=11% Similarity=-0.024 Sum_probs=66.7
Q ss_pred CCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCC-eEEEeccCCCCCC----CCCceeEEEeccc
Q 023870 6 MQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQ-IITQASSLSQLPV----ESFSIDTVLSISS 68 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~-v~~~~~d~~~lp~----~~~sfD~V~s~~~ 68 (276)
.|.+||.+..|.+.-+..+. +.|++.|++++...+.. +.++++|+..+.. ...+||+|++.-.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 57789999988875422222 77888888877665543 8999999876532 2578999998543
Q ss_pred ccc---------CCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 69 SHE---------LPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 69 l~~---------~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
... ... ..++.++.++|+|||.|++.....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 211 122 578899999999999999998764
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.89 E-value=0.0012 Score=66.37 Aligned_cols=109 Identities=13% Similarity=0.088 Sum_probs=75.4
Q ss_pred CCCCcEEEEccCCCCcHH-------------HHHHHHHHHHHHhhhhCCC---CeEEEeccCCC-CCCCCCceeEEEecc
Q 023870 5 KMQSAVLALSEDKILPVS-------------AVLNAIRDLGDEAVEQCDP---QIITQASSLSQ-LPVESFSIDTVLSIS 67 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~-------------~v~~~m~~~A~~~~~~~~~---~v~~~~~d~~~-lp~~~~sfD~V~s~~ 67 (276)
..|.+||.+..+.+.-+- ++.+.|++.|++++...+. ++.++++|+.+ ++...++||+|++..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 368899999888763211 1227888888888766654 48999999876 455568999999854
Q ss_pred cc-----------ccCCh-HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 68 SS-----------HELPG-DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 68 ~l-----------~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
.. +...+ ..++.++.++|||||+|++.........+ ...+...||.
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~--------~~~l~~~g~~ 675 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD--------LDGLAKLGLK 675 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC--------HHHHHHTTEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC--------HHHHHHcCCc
Confidence 21 11223 67899999999999999988865332211 1235567876
No 246
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.87 E-value=0.0023 Score=56.62 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=59.6
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHH----------HHHHHHHhh---hhCCCCeEEE--eccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNA----------IRDLGDEAV---EQCDPQIITQ--ASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~----------m~~~A~~~~---~~~~~~v~~~--~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.+++|++||+++.|.+.-...+... |...++++. ...+.++.++ ++|+..++ +++||+|++..
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~ 148 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDV 148 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeC
Confidence 4678999999998886432211111 110010000 0011157888 88998876 78999999976
Q ss_pred ccccCC----h-H---HHHHHHHHhccCCc--EEEEEecCC
Q 023870 68 SSHELP----G-D---QLLEEISRVLKPGG--TILIYKKLT 98 (276)
Q Consensus 68 ~l~~~~----~-~---~~l~ei~rvLKPgG--~l~i~~~~~ 98 (276)
+ ++.. + . .+|.+++|+||||| .|++..+.+
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~ 188 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCP 188 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCT
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCC
Confidence 6 3322 1 1 37899999999999 999988763
No 247
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=96.83 E-value=0.0052 Score=54.95 Aligned_cols=114 Identities=9% Similarity=0.015 Sum_probs=76.2
Q ss_pred CCCCCCcEEEEccCCCCc-HHHHH------------HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecc
Q 023870 3 TGKMQSAVLALSEDKILP-VSAVL------------NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~-~~~v~------------~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
.++.|..||++..|.+.- +.... +.+.+.+++++...+. .+.++.+|+..++ +.+.||.|+...
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~~ 200 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMGY 200 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEECC
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEECC
Confidence 467899999998888633 11111 6667777777766554 4889999998875 357899998764
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
... ..++|..+.++|||||.+.+.+..+.... .....+.+.+.+...||.
T Consensus 201 p~~---~~~~l~~a~~~lk~gG~ih~~~~~~e~~~-~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 201 VVR---THEFIPKALSIAKDGAIIHYHNTVPEKLM-PREPFETFKRITKEYGYD 250 (278)
T ss_dssp CSS---GGGGHHHHHHHEEEEEEEEEEEEEEGGGT-TTTTHHHHHHHHHHTTCE
T ss_pred CCc---HHHHHHHHHHHcCCCCEEEEEeeeccccc-chhHHHHHHHHHHHcCCc
Confidence 321 25678889999999999988776532110 011123455566777875
No 248
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.00087 Score=53.71 Aligned_cols=60 Identities=20% Similarity=0.336 Sum_probs=45.1
Q ss_pred CCCCCCCceeEEEeccccc-c-CC-hHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 52 QLPVESFSIDTVLSISSSH-E-LP-GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 52 ~lp~~~~sfD~V~s~~~l~-~-~~-~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
...+++++||.|+...... . .. .+.++..+++.|||||+|.. .. . ....++.++||+..+
T Consensus 52 ~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g--l~-----~------~~~~EailaGfvv~~ 114 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG--LS-----D------IYKVDALINGFEIIN 114 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC--CC-----H------HHHHHHHHHTEEEEC
T ss_pred cccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe--cC-----c------chhhHHHhhccEecc
Confidence 4567899999999876432 1 11 28999999999999999996 11 1 345689999999655
No 249
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.73 E-value=0.0031 Score=57.41 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=74.7
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEec
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSI 66 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~ 66 (276)
.+.+||+++.|.+.-+..+. +.|.++|+.+....+..+.+..+|... +.....||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEEC
Confidence 46788888888864322221 456667766655455567888888765 3456789999998
Q ss_pred cccccCCh-------------------HHHHHHHHHhccCCcEEEEEecCCCCch-hHHHHHHHHHHHHHHCCCcc
Q 023870 67 SSSHELPG-------------------DQLLEEISRVLKPGGTILIYKKLTSDKG-DVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 67 ~~l~~~~~-------------------~~~l~ei~rvLKPgG~l~i~~~~~~~~~-~~~~~~~~l~~~l~laGF~~ 122 (276)
-.+++++. ..++.++.+.|||||++++..+.. ... .. .+.+++.+...|++.
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~-~~~~~~---~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA-MFGTSD---FAKVDKFIKKNGHIE 280 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG-GGGSTT---HHHHHHHHHHHEEEE
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch-hcCCch---HHHHHHHHHhCCeEE
Confidence 77655432 158999999999999999888542 111 11 135666677777754
No 250
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.52 E-value=0.027 Score=53.05 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=73.1
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCC-CeEEEeccCCC----CCCCCCceeEEEecc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDP-QIITQASSLSQ----LPVESFSIDTVLSIS 67 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~----lp~~~~sfD~V~s~~ 67 (276)
..+.+||+++.|.+.-+..+. +.|++.|++++...+. ++.|+++|+.+ +++++++||+|++.-
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 567899999999876533332 7888989888766654 59999999987 456778999999865
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 68 SSHELPGDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 68 ~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
..... .++++.+.+ ++|++.++++... ..+. .-...|...||.-..
T Consensus 365 Pr~g~--~~~~~~l~~-~~p~~ivyvsc~p----~tla----rd~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 365 ARAGA--AGVMQQIIK-LEPIRIVYVSCNP----ATLA----RDSEALLKAGYTIAR 410 (433)
T ss_dssp CTTCC--HHHHHHHHH-HCCSEEEEEESCH----HHHH----HHHHHHHHTTCEEEE
T ss_pred CCccH--HHHHHHHHh-cCCCeEEEEECCh----HHHH----hhHHHHHHCCcEEEE
Confidence 43332 345555543 7899988887532 1111 122345667887543
No 251
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.42 E-value=0.0083 Score=53.77 Aligned_cols=67 Identities=7% Similarity=-0.109 Sum_probs=46.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCC-CCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCD-PQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~-~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
++.|.+||.++.|.+.-...+. +.|++.++++....+ .++.++.+|+..++++ +||+|+++...+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~py~ 117 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIPYK 117 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECCGG
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCCcc
Confidence 4578899999999876543332 788888887765444 3588999999988764 899999987666
Q ss_pred cC
Q 023870 71 EL 72 (276)
Q Consensus 71 ~~ 72 (276)
+.
T Consensus 118 ~~ 119 (299)
T 2h1r_A 118 IS 119 (299)
T ss_dssp GH
T ss_pred cc
Confidence 53
No 252
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=96.34 E-value=0.017 Score=54.58 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=62.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
+..+.+||++..|.+.-+..+. +.|++.|++++...+..+.++.+|+.++... +||+|++......
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVK--GFDTVIVDPPRAG 365 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTTC
T ss_pred cCCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCcc--CCCEEEEcCCccc
Confidence 3567899999999875422222 7888888887765555588999999887432 8999998654322
Q ss_pred CChHHHHHHHHHhccCCcEEEEEe
Q 023870 72 LPGDQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 72 ~~~~~~l~ei~rvLKPgG~l~i~~ 95 (276)
.. ..+++.+. .|+|+|.++++.
T Consensus 366 ~~-~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 LH-PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp SC-HHHHHHHH-HHCCSEEEEEES
T ss_pred hH-HHHHHHHH-hcCCCcEEEEEC
Confidence 21 34666554 599999999875
No 253
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.33 E-value=0.012 Score=52.49 Aligned_cols=115 Identities=10% Similarity=0.019 Sum_probs=78.8
Q ss_pred CCCCcEEEEccCCCCc--------------HHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccc
Q 023870 5 KMQSAVLALSEDKILP--------------VSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSH 70 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~--------------~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~ 70 (276)
..-.+||+++.|...- +-++-+.|++.+++++...+....+.+.|...-+ +...||+|+++-++|
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti~ 209 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTLP 209 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHHH
Confidence 3456788887776421 1134489999999988888888888888886654 577899999999999
Q ss_pred cCCh---HHHHHHHHHhccCCcEEEEEecC--CCCchhHHH-HHHHHHHHHHHCCCc
Q 023870 71 ELPG---DQLLEEISRVLKPGGTILIYKKL--TSDKGDVDK-AISALEGKLLLAGFL 121 (276)
Q Consensus 71 ~~~~---~~~l~ei~rvLKPgG~l~i~~~~--~~~~~~~~~-~~~~l~~~l~laGF~ 121 (276)
++.+ ...+ +++..|+|+|.|+-.+.. .+..-.+.. ..+.++..+...|..
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCR 265 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCC
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCc
Confidence 9976 3566 899999999999877651 111111222 223455556667763
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=95.98 E-value=0.0088 Score=55.49 Aligned_cols=93 Identities=15% Similarity=0.078 Sum_probs=63.9
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhC------C---CCeEEEeccCCCCCC----CCCc
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQC------D---PQIITQASSLSQLPV----ESFS 59 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~------~---~~v~~~~~d~~~lp~----~~~s 59 (276)
.+.+||+++.|.+.-++.+. +.|++.|++..... . .++.++.+|+...-- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 56799999988765444333 88888888875421 1 158888999865421 3578
Q ss_pred eeEEEecccc-c------cCChHHHHHHH----HHhccCCcEEEEEecCC
Q 023870 60 IDTVLSISSS-H------ELPGDQLLEEI----SRVLKPGGTILIYKKLT 98 (276)
Q Consensus 60 fD~V~s~~~l-~------~~~~~~~l~ei----~rvLKPgG~l~i~~~~~ 98 (276)
||+|+.-..- . ++...++++.+ .++|+|||.|++.....
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 9999985422 1 12235677777 89999999999886554
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=95.88 E-value=0.00068 Score=58.80 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC-CceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~-~sfD~V~s~~~l~ 70 (276)
++.|++||.++.|.+.-...+. +.|++.++++.. ...++.++++|+.+++++. ++| .|+++..++
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYH 104 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSS
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCcccCCCc-EEEEeCCcc
Confidence 4678899999999875533332 233333333322 1235889999999999874 689 676654332
Q ss_pred cC-----------Ch-HHHH----HHHHHhccCCcEEEEEe
Q 023870 71 EL-----------PG-DQLL----EEISRVLKPGGTILIYK 95 (276)
Q Consensus 71 ~~-----------~~-~~~l----~ei~rvLKPgG~l~i~~ 95 (276)
.. .. ..++ +.+.|+|+|||.|++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 105 LSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 21 11 2233 55777888887766544
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.77 E-value=0.029 Score=52.89 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=62.4
Q ss_pred CCCCcEEEEccCCCCcHHHHH---------------------------HHHHHHHHHhhhhCCC---CeEEEeccCCCCC
Q 023870 5 KMQSAVLALSEDKILPVSAVL---------------------------NAIRDLGDEAVEQCDP---QIITQASSLSQLP 54 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~---------------------------~~m~~~A~~~~~~~~~---~v~~~~~d~~~lp 54 (276)
+.|.+||+.+.|.+.-+..+. +.|.++|+.+....+. .+.+.++|....+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 457789999888874422221 4555666655443443 4567788887766
Q ss_pred CCCCceeEEEeccccccCCh------------------HHHHHHHHHhccCCcEEEEEecC
Q 023870 55 VESFSIDTVLSISSSHELPG------------------DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 55 ~~~~sfD~V~s~~~l~~~~~------------------~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.. ..||+|+++-.++.... ..+++++++.|||||++.+..+.
T Consensus 250 ~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 250 PS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp CS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred cc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 44 38999999865443211 37899999999999999888753
No 257
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=95.68 E-value=0.006 Score=53.83 Aligned_cols=72 Identities=18% Similarity=0.291 Sum_probs=49.3
Q ss_pred CCeEEEeccCCC-CCCCC----CceeEEEec-cccccCC---hHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHH
Q 023870 41 PQIITQASSLSQ-LPVES----FSIDTVLSI-SSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISAL 111 (276)
Q Consensus 41 ~~v~~~~~d~~~-lp~~~----~sfD~V~s~-~~l~~~~---~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l 111 (276)
.++..+.+|+.+ ++.-+ ..||+|+.- ++....+ ..++|.+++|.|||||+|+..... . .+
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa----~-------~v 218 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA----G-------FV 218 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB----H-------HH
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC----H-------HH
Confidence 346788899865 55322 279999973 3222112 268999999999999999854322 1 56
Q ss_pred HHHHHHCCCcch
Q 023870 112 EGKLLLAGFLDA 123 (276)
Q Consensus 112 ~~~l~laGF~~v 123 (276)
.+.|..+||...
T Consensus 219 rr~L~~aGF~v~ 230 (257)
T 2qy6_A 219 RRGLQEAGFTMQ 230 (257)
T ss_dssp HHHHHHHTEEEE
T ss_pred HHHHHHCCCEEE
Confidence 677888999854
No 258
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.88 E-value=0.056 Score=46.71 Aligned_cols=77 Identities=5% Similarity=0.034 Sum_probs=51.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC-CceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVES-FSIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~-~sfD~V~s~~~l~ 70 (276)
+..|.+||.++.|.+.-...+. +.|++.++++... ..++.++++|+.++++++ ..| .|+++..++
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGCCCCSSCCC-EEEEECCGG
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhCCcccCCCe-EEEEeCCcc
Confidence 4578899999999875433232 7788888776543 246899999999999875 456 566665544
Q ss_pred cCChHHHHHHHHHh
Q 023870 71 ELPGDQLLEEISRV 84 (276)
Q Consensus 71 ~~~~~~~l~ei~rv 84 (276)
+ ....+..+.+.
T Consensus 106 ~--~~~~l~~~l~~ 117 (244)
T 1qam_A 106 I--STDIIRKIVFD 117 (244)
T ss_dssp G--HHHHHHHHHHS
T ss_pred c--CHHHHHHHHhc
Confidence 2 23344444443
No 259
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=94.67 E-value=0.065 Score=49.40 Aligned_cols=111 Identities=18% Similarity=0.068 Sum_probs=63.9
Q ss_pred CCCcEEEEccCCCCcHHHHHHHHHHHHHHhhh---------hCCCCeEEEeccCCCCCCCCCceeEEEeccccc---c--
Q 023870 6 MQSAVLALSEDKILPVSAVLNAIRDLGDEAVE---------QCDPQIITQASSLSQLPVESFSIDTVLSISSSH---E-- 71 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~---------~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~---~-- 71 (276)
.+.+||+++.|.+.-+..+.+.+. ...++. ....++.++++|+...+ +...||+|+++-.+. .
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~--~~~~i~gvDi~~~~~~~a~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~ 115 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHG--TAYRFVGVEIDPKALDLPPWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEAS 115 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHC--SCSEEEEEESCTTTCCCCTTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTT
T ss_pred CCCEEEECCCCChHHHHHHHHHhC--CCCeEEEEECCHHHHHhCCCCcEEeCChhhcC-ccCCCCEEEECcCccCccccc
Confidence 467999999998743222211110 000110 00024778888887764 356899999963221 1
Q ss_pred -----CCh--------------------HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 72 -----LPG--------------------DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 72 -----~~~--------------------~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
+.. ..++..+.++|+|||++++..+..-..... ...+++.+...|+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~---~~~lr~~l~~~~~~~ 188 (421)
T 2ih2_A 116 KYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLED---FALLREFLAREGKTS 188 (421)
T ss_dssp TCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGG---GHHHHHHHHHHSEEE
T ss_pred ccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCcc---HHHHHHHHHhcCCeE
Confidence 111 256899999999999999887652100111 125556666667643
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.66 E-value=0.11 Score=46.57 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=51.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
++.|++||.|+.|.+.-...+. +.|++.++++.. ...++.++.+|+..+++++.+||+|+++..+++
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred CCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCcccCCccEEEEeCcccc
Confidence 4678999999999875433232 667777777654 234689999999999999889999998876554
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=94.65 E-value=0.18 Score=45.40 Aligned_cols=93 Identities=5% Similarity=-0.126 Sum_probs=60.4
Q ss_pred CCCCCcEEEEccCCCCcHHHHH---------------HHHHHHHHHhhhhCCC-CeEEEeccCCCCCCCC---CceeEEE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL---------------NAIRDLGDEAVEQCDP-QIITQASSLSQLPVES---FSIDTVL 64 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~---------------~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp~~~---~sfD~V~ 64 (276)
+++|++||++..+.+.-.-.+. +.|++.+++++...+. ++.++.+|+..++... .+||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4678999999887753321111 5667777777776664 5889999988775432 5799999
Q ss_pred ecc------ccc------c---CC--h--------HHHHHHHHHhccCCcEEEEEecC
Q 023870 65 SIS------SSH------E---LP--G--------DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 65 s~~------~l~------~---~~--~--------~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+-. .+. | +. + .++|...++.|+ ||+|+.++-+
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 721 111 1 00 1 246777778887 9998887654
No 262
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.45 E-value=0.034 Score=49.58 Aligned_cols=79 Identities=18% Similarity=0.231 Sum_probs=50.5
Q ss_pred eEEEeccCCC-CC-CCCCceeEEEeccccccC--------------------Ch-HHHHHHHHHhccCCcEEEEEecCCC
Q 023870 43 IITQASSLSQ-LP-VESFSIDTVLSISSSHEL--------------------PG-DQLLEEISRVLKPGGTILIYKKLTS 99 (276)
Q Consensus 43 v~~~~~d~~~-lp-~~~~sfD~V~s~~~l~~~--------------------~~-~~~l~ei~rvLKPgG~l~i~~~~~~ 99 (276)
+.++++|..+ ++ +++++||+|++.-.+... .. ..++.+++|+|||||.|++......
T Consensus 22 ~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~ 101 (297)
T 2zig_A 22 HRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVA 101 (297)
T ss_dssp EEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEE
T ss_pred CEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCc
Confidence 5788898865 33 578899999996543211 11 3577899999999999988754210
Q ss_pred -------C--chhHHHHHHHHHHHHHHCCCcchh
Q 023870 100 -------D--KGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 100 -------~--~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
. ...+. ..+...+..+||....
T Consensus 102 ~~~~~~g~~~~~~~~---~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 102 VARRRFGRHLVFPLH---ADIQVRCRKLGFDNLN 132 (297)
T ss_dssp EECC----EEEECHH---HHHHHHHHHTTCEEEE
T ss_pred cccccCCcccccccH---HHHHHHHHHcCCeeec
Confidence 0 01111 2455567778987543
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=94.28 E-value=0.16 Score=47.21 Aligned_cols=72 Identities=13% Similarity=0.152 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccccc-CC---h-HHHHHHHHHhccC--CcEEEEEe
Q 023870 25 LNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSHE-LP---G-DQLLEEISRVLKP--GGTILIYK 95 (276)
Q Consensus 25 ~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~-~~---~-~~~l~ei~rvLKP--gG~l~i~~ 95 (276)
.+.|++.|++++...+. .+.+.++|+.+++.+. +||+|+++-.+.. +. . ..+++++.++||+ ||.+++.+
T Consensus 265 d~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 265 DGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp CHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChHHCCccC-CcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 37788888888877665 4899999999988754 8999999865432 22 2 5677778888887 99999888
Q ss_pred cC
Q 023870 96 KL 97 (276)
Q Consensus 96 ~~ 97 (276)
..
T Consensus 344 ~~ 345 (384)
T 3ldg_A 344 ND 345 (384)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 264
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=94.24 E-value=0.12 Score=48.19 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccccc-CC---h-HHHHHHHHHhccC--CcEEEEEe
Q 023870 25 LNAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSHE-LP---G-DQLLEEISRVLKP--GGTILIYK 95 (276)
Q Consensus 25 ~~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~-~~---~-~~~l~ei~rvLKP--gG~l~i~~ 95 (276)
.+.|++.|++++...+. .+.++++|+.+++.+ .+||+|+++-.+.. +. . ..+++++.++||+ ||.+++.+
T Consensus 272 d~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 272 DARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp CHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 37888888888877665 389999999998875 48999999865432 11 1 4567777778877 99998887
Q ss_pred cC
Q 023870 96 KL 97 (276)
Q Consensus 96 ~~ 97 (276)
..
T Consensus 351 ~~ 352 (393)
T 3k0b_A 351 SY 352 (393)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 265
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=93.83 E-value=0.17 Score=45.14 Aligned_cols=57 Identities=19% Similarity=0.193 Sum_probs=42.9
Q ss_pred CeEEEeccCCCCCCCCCceeEEEeccccc----cCCh---HHHHHHHHHhccCC-cEEEEEecCC
Q 023870 42 QIITQASSLSQLPVESFSIDTVLSISSSH----ELPG---DQLLEEISRVLKPG-GTILIYKKLT 98 (276)
Q Consensus 42 ~v~~~~~d~~~lp~~~~sfD~V~s~~~l~----~~~~---~~~l~ei~rvLKPg-G~l~i~~~~~ 98 (276)
++.+.+.+++...++.+.||+|++-.+.+ +... -.+|..+.++|||| |.|++..+.+
T Consensus 123 ~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 123 NIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 45566777776778889999999976554 3222 23568889999999 9999988774
No 266
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=93.82 E-value=0.14 Score=47.47 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhhhCCC--CeEEEeccCCCCCCCCCceeEEEecccccc-CC---h-HHHHHHHHHhccC--CcEEEEEec
Q 023870 26 NAIRDLGDEAVEQCDP--QIITQASSLSQLPVESFSIDTVLSISSSHE-LP---G-DQLLEEISRVLKP--GGTILIYKK 96 (276)
Q Consensus 26 ~~m~~~A~~~~~~~~~--~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~-~~---~-~~~l~ei~rvLKP--gG~l~i~~~ 96 (276)
+.|++.|++++...+. .+.+.++|+.+++.+ .+||+|+++-.+.. +. . ..+++++.++||+ ||.+++.+.
T Consensus 267 ~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 267 EESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 7888888888776665 489999999998764 58999999766532 21 2 5677778888887 999988876
Q ss_pred C
Q 023870 97 L 97 (276)
Q Consensus 97 ~ 97 (276)
.
T Consensus 346 ~ 346 (385)
T 3ldu_A 346 Y 346 (385)
T ss_dssp C
T ss_pred C
Confidence 5
No 267
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=93.70 E-value=0.19 Score=49.79 Aligned_cols=82 Identities=15% Similarity=0.106 Sum_probs=53.2
Q ss_pred cEEEEccCCCCcHHHHH------------------HHHHHHHHHhhhh--CCCCeEEEeccCCCCCCCCCceeEEEeccc
Q 023870 9 AVLALSEDKILPVSAVL------------------NAIRDLGDEAVEQ--CDPQIITQASSLSQLPVESFSIDTVLSISS 68 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~------------------~~m~~~A~~~~~~--~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~ 68 (276)
.||+|+.|.+ |+..+. ..|...+++.+.. .+..|+++.++++++.+| +.+|+|+|-..
T Consensus 360 vVldVGaGrG-pLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwM 437 (637)
T 4gqb_A 360 VLMVLGAGRG-PLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELL 437 (637)
T ss_dssp EEEEESCTTS-HHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred EEEEECCCCc-HHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcC
Confidence 5788888886 332111 1133334443333 334599999999999876 68999999432
Q ss_pred cccC-C-h-HHHHHHHHHhccCCcEEE
Q 023870 69 SHEL-P-G-DQLLEEISRVLKPGGTIL 92 (276)
Q Consensus 69 l~~~-~-~-~~~l~ei~rvLKPgG~l~ 92 (276)
-..+ . . .+++....|.|||||.++
T Consensus 438 G~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 438 GSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp BTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cccccccCCHHHHHHHHHhcCCCcEEc
Confidence 1111 1 1 567778899999999985
No 268
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=93.19 E-value=0.15 Score=47.40 Aligned_cols=92 Identities=14% Similarity=0.062 Sum_probs=60.2
Q ss_pred CCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhh---------CCCCeEEEeccCCCC----CCCCCc
Q 023870 6 MQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQ---------CDPQIITQASSLSQL----PVESFS 59 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~---------~~~~v~~~~~d~~~l----p~~~~s 59 (276)
...+||+++.|.+.-++.+. +.+++.+++.... ...+++.+.+|+-.. .-..+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 45789999999876666555 6788888775321 112367777776432 123468
Q ss_pred eeEEEecccc-------ccCC----hHHHHHHHHHhccCCcEEEEEecC
Q 023870 60 IDTVLSISSS-------HELP----GDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 60 fD~V~s~~~l-------~~~~----~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
||+|+.=..- .... ..++++.++++|+|||.++.+...
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 9999973211 1111 267889999999999999876543
No 269
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=92.73 E-value=0.077 Score=48.05 Aligned_cols=70 Identities=21% Similarity=0.256 Sum_probs=49.6
Q ss_pred eEEEeccCC-CCC-CCCCceeEEEe-ccccccCCh---HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHH
Q 023870 43 IITQASSLS-QLP-VESFSIDTVLS-ISSSHELPG---DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLL 116 (276)
Q Consensus 43 v~~~~~d~~-~lp-~~~~sfD~V~s-~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~ 116 (276)
+.+..+|+. .++ ++...||+|+. .++...-|. .+++++++|.++|||+|.-.... + .+++.|.
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaa----g-------~VRR~L~ 236 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSS----L-------SVRKSLL 236 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCC----H-------HHHHHHH
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCc----H-------HHHHHHH
Confidence 556778875 344 45568999987 333333232 78999999999999999854432 2 6678899
Q ss_pred HCCCcch
Q 023870 117 LAGFLDA 123 (276)
Q Consensus 117 laGF~~v 123 (276)
.+||...
T Consensus 237 ~aGF~V~ 243 (308)
T 3vyw_A 237 TLGFKVG 243 (308)
T ss_dssp HTTCEEE
T ss_pred HCCCEEE
Confidence 9999853
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=92.46 E-value=0.13 Score=47.61 Aligned_cols=87 Identities=11% Similarity=0.000 Sum_probs=58.2
Q ss_pred CCCcEEEEccCCCCcH-H-------------HHHHHHHHHHHHhhhhC---------------CCC-eEEEeccCCCCCC
Q 023870 6 MQSAVLALSEDKILPV-S-------------AVLNAIRDLGDEAVEQC---------------DPQ-IITQASSLSQLPV 55 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~-~-------------~v~~~m~~~A~~~~~~~---------------~~~-v~~~~~d~~~lp~ 55 (276)
.|.+||++..|.+.-. . ++.+.+++.+++++... +.. +.++++|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 4677888877775321 1 11166677777766554 544 8889999866532
Q ss_pred -CCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 023870 56 -ESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 56 -~~~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~ 95 (276)
....||+|+.. .. .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lD-P~--~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLD-PF--GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEEC-CS--SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeC-CC--CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 14579999953 21 112678999999999999888764
No 271
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=91.26 E-value=0.38 Score=43.97 Aligned_cols=86 Identities=8% Similarity=0.032 Sum_probs=58.8
Q ss_pred CCcEEEEccCCCCcHH------------HHHHHHHHHHHHhhhhCCC-CeEEEeccCCCCC--CCC--------------
Q 023870 7 QSAVLALSEDKILPVS------------AVLNAIRDLGDEAVEQCDP-QIITQASSLSQLP--VES-------------- 57 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~------------~v~~~m~~~A~~~~~~~~~-~v~~~~~d~~~lp--~~~-------------- 57 (276)
|.+||++..|.+.-.- ++.+.|++.|++++...+. ++.++.+|++++. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 5789999888864321 1227888888887766554 5899999987642 222
Q ss_pred CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 58 FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.+||+|+..-... .+..++.+.|+++|++++..-.
T Consensus 294 ~~fD~Vv~dPPr~-----g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 294 YQCETIFVDPPRS-----GLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp CCEEEEEECCCTT-----CCCHHHHHHHTTSSEEEEEESC
T ss_pred CCCCEEEECcCcc-----ccHHHHHHHHhCCCEEEEEECC
Confidence 3899998753222 2345677888899999877654
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=91.16 E-value=0.25 Score=47.95 Aligned_cols=72 Identities=13% Similarity=-0.006 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhhhCCCC------eEEEeccCCCCC-CCCCceeEEEeccccccCC---------------hHHHHHHHHH
Q 023870 26 NAIRDLGDEAVEQCDPQ------IITQASSLSQLP-VESFSIDTVLSISSSHELP---------------GDQLLEEISR 83 (276)
Q Consensus 26 ~~m~~~A~~~~~~~~~~------v~~~~~d~~~lp-~~~~sfD~V~s~~~l~~~~---------------~~~~l~ei~r 83 (276)
+.|.++|+.+....+.. +.+.++|....+ .....||+|+++-.+.... .-.++.++.+
T Consensus 221 ~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~ 300 (541)
T 2ar0_A 221 PGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIE 300 (541)
T ss_dssp HHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHH
Confidence 44555555544333322 456777765543 4567899999975543211 1479999999
Q ss_pred hccCCcEEEEEecC
Q 023870 84 VLKPGGTILIYKKL 97 (276)
Q Consensus 84 vLKPgG~l~i~~~~ 97 (276)
.|||||++.+..+.
T Consensus 301 ~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 301 TLHPGGRAAVVVPD 314 (541)
T ss_dssp HEEEEEEEEEEEEH
T ss_pred HhCCCCEEEEEecC
Confidence 99999999888753
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=91.12 E-value=0.31 Score=48.87 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=41.3
Q ss_pred CCCCeEEEeccCCCCCCC-----CCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEE
Q 023870 39 CDPQIITQASSLSQLPVE-----SFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTIL 92 (276)
Q Consensus 39 ~~~~v~~~~~d~~~lp~~-----~~sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~ 92 (276)
.+..|+++.++++++.++ .+.+|+|+|-..-....+ .+.|..+.|.|||||.++
T Consensus 470 ~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 470 WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 345699999999999875 689999999553222222 578888899999999875
No 274
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=90.74 E-value=0.87 Score=38.48 Aligned_cols=66 Identities=12% Similarity=-0.006 Sum_probs=45.0
Q ss_pred HHHHHHHHHhhhhCCC----CeEEEeccCCCC---------------C--------C-CCCceeEEEeccccccCChHHH
Q 023870 26 NAIRDLGDEAVEQCDP----QIITQASSLSQL---------------P--------V-ESFSIDTVLSISSSHELPGDQL 77 (276)
Q Consensus 26 ~~m~~~A~~~~~~~~~----~v~~~~~d~~~l---------------p--------~-~~~sfD~V~s~~~l~~~~~~~~ 77 (276)
+.+.+.|++.....+. +|.++.+++... + + ..++||+|+.-.... ...
T Consensus 61 ~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~----~~~ 136 (202)
T 3cvo_A 61 RAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR----VGC 136 (202)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH----HHH
T ss_pred HHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc----hhH
Confidence 5666777776666654 588888986542 2 2 236899999854211 356
Q ss_pred HHHHHHhccCCcEEEEEe
Q 023870 78 LEEISRVLKPGGTILIYK 95 (276)
Q Consensus 78 l~ei~rvLKPgG~l~i~~ 95 (276)
+..+.+.|+|||++++-+
T Consensus 137 ~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 137 ALATAFSITRPVTLLFDD 154 (202)
T ss_dssp HHHHHHHCSSCEEEEETT
T ss_pred HHHHHHhcCCCeEEEEeC
Confidence 666889999999997654
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=90.41 E-value=0.74 Score=46.05 Aligned_cols=71 Identities=17% Similarity=0.131 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhhhCCCC--eEEEeccCCCC--CCCCCceeEEEecccccc-CC---h-HHHHHHH---HHhccCCcEEEE
Q 023870 26 NAIRDLGDEAVEQCDPQ--IITQASSLSQL--PVESFSIDTVLSISSSHE-LP---G-DQLLEEI---SRVLKPGGTILI 93 (276)
Q Consensus 26 ~~m~~~A~~~~~~~~~~--v~~~~~d~~~l--p~~~~sfD~V~s~~~l~~-~~---~-~~~l~ei---~rvLKPgG~l~i 93 (276)
+.|++.|++++...+.. +.+.++|+.++ |...++||+|+++-.+.. +. . ..+++.+ .+.+.|||.+++
T Consensus 266 ~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 266 ARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 67888888888777765 89999999887 444458999999855422 11 1 3444444 455568999998
Q ss_pred Eec
Q 023870 94 YKK 96 (276)
Q Consensus 94 ~~~ 96 (276)
.+.
T Consensus 346 lt~ 348 (703)
T 3v97_A 346 FSA 348 (703)
T ss_dssp EES
T ss_pred EeC
Confidence 865
No 276
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=90.36 E-value=0.44 Score=44.38 Aligned_cols=88 Identities=10% Similarity=0.004 Sum_probs=59.1
Q ss_pred CCCCcEEEEccCCCCc-HHHH--------------HHHHHHHHHHhhhhCCCC---eEEEeccCCCCC--CCCCceeEEE
Q 023870 5 KMQSAVLALSEDKILP-VSAV--------------LNAIRDLGDEAVEQCDPQ---IITQASSLSQLP--VESFSIDTVL 64 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~-~~~v--------------~~~m~~~A~~~~~~~~~~---v~~~~~d~~~lp--~~~~sfD~V~ 64 (276)
+.|.+||++..+.+.- +... .+.+.+.+++++...+.. +.++.+|+..+- .....||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 3578899987777522 1111 156667777777665542 888999875431 1245799999
Q ss_pred eccccccCChHHHHHHHHHhccCCcEEEEEe
Q 023870 65 SISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 65 s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~ 95 (276)
.-- . -....++..+.+.|+|||.|+++.
T Consensus 131 lDP-~--g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F--GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S--SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C--cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 754 1 112578999999999999888775
No 277
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=89.92 E-value=0.65 Score=40.93 Aligned_cols=65 Identities=12% Similarity=0.017 Sum_probs=48.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCC-ceeEEEeccccc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-SIDTVLSISSSH 70 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~-sfD~V~s~~~l~ 70 (276)
++.| +||.|+.|.+.-...+. +.|++.++++.. +.++.++++|+..+++++. .||.|+++..++
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPWEEVPQGSLLVANLPYH 121 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCGGGSCTTEEEEEEECSS
T ss_pred CCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCChhhccCccEEEecCccc
Confidence 4567 99999999875433332 677888877664 2468999999999988753 789999987654
Q ss_pred c
Q 023870 71 E 71 (276)
Q Consensus 71 ~ 71 (276)
.
T Consensus 122 i 122 (271)
T 3fut_A 122 I 122 (271)
T ss_dssp C
T ss_pred c
Confidence 3
No 278
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.54 E-value=0.33 Score=43.76 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=39.8
Q ss_pred CeEEEeccCCC-CC-CCCCceeEEEecccccc--------------CCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 42 QIITQASSLSQ-LP-VESFSIDTVLSISSSHE--------------LPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 42 ~v~~~~~d~~~-lp-~~~~sfD~V~s~~~l~~--------------~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
...++.+|... +. +++++||+|++.-.... +.. ...+.+++|+|||||.+++....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 35677788653 43 67889999998543211 112 67889999999999999987543
No 279
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=89.19 E-value=0.91 Score=39.53 Aligned_cols=64 Identities=9% Similarity=0.067 Sum_probs=47.6
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC----CceeEEEecc
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVES----FSIDTVLSIS 67 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~----~sfD~V~s~~ 67 (276)
+..|++||.|+.|.+.-...+. +.|++.++++... ..++.++++|+..+++++ ..|| |+++.
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCGGGSCCSSCEE-EEEEC
T ss_pred CCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCHHHhccCCCeE-EEecC
Confidence 4678999999999875543332 7888888887654 456899999999998764 4688 66665
Q ss_pred cc
Q 023870 68 SS 69 (276)
Q Consensus 68 ~l 69 (276)
.+
T Consensus 105 PY 106 (255)
T 3tqs_A 105 PY 106 (255)
T ss_dssp CH
T ss_pred Cc
Confidence 43
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=86.81 E-value=0.34 Score=45.50 Aligned_cols=91 Identities=12% Similarity=0.149 Sum_probs=58.5
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhC--CC-CeEEEeccCCCC-CC-CCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQC--DP-QIITQASSLSQL-PV-ESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~--~~-~v~~~~~d~~~l-p~-~~~sfD~V~s~ 66 (276)
++.|.+||+++.|.+.-+..+. +.|++.|++++... +. ++.++++|+.+. +. ++.+||+|++.
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4568999999999865422222 78899998887655 54 589999999874 42 34689999984
Q ss_pred cc--------cccCCh-HHHHHHHHHhccCC-cEEEEE
Q 023870 67 SS--------SHELPG-DQLLEEISRVLKPG-GTILIY 94 (276)
Q Consensus 67 ~~--------l~~~~~-~~~l~ei~rvLKPg-G~l~i~ 94 (276)
-. .+.+.+ ..-+.++.+.|... ..+++.
T Consensus 171 PPrr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK 208 (410)
T 3ll7_A 171 PARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAK 208 (410)
T ss_dssp CEEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEE
T ss_pred CCCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEE
Confidence 22 122223 33456677765544 344443
No 281
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=86.81 E-value=0.85 Score=41.23 Aligned_cols=92 Identities=16% Similarity=0.080 Sum_probs=53.2
Q ss_pred CCCCCCcEEEEcc---CCCCcHHHHHHHHHHHHHH--hhh-----h-CCCCeEEEeccCCCCCCCCCceeEEEecccc--
Q 023870 3 TGKMQSAVLALSE---DKILPVSAVLNAIRDLGDE--AVE-----Q-CDPQIITQASSLSQLPVESFSIDTVLSISSS-- 69 (276)
Q Consensus 3 ~~~~g~~vL~v~~---~~~~~~~~v~~~m~~~A~~--~~~-----~-~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l-- 69 (276)
-++.|++||.++- ....|...+...+ ..+ .+- . ....-.++++|...+.. ...||+|+|=++.
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~VLr~~---~p~g~~VVavDL~~~~sda~~~IqGD~~~~~~-~~k~DLVISDMAPNt 181 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTAVLRQW---LPTGTLLVDSDLNDFVSDADSTLIGDCATVHT-ANKWDLIISDMYDPR 181 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHHHHHHH---SCTTCEEEEEESSCCBCSSSEEEESCGGGEEE-SSCEEEEEECCCCTT
T ss_pred eecCCCEEEeCCCCCCCCCCCcHHHHHHh---CCCCcEEEEeeCcccccCCCeEEEcccccccc-CCCCCEEEecCCCCc
Confidence 3689999999984 2223544222222 111 000 0 00112347788655433 4789999994321
Q ss_pred --c-------cCCh-HHHHHHHHHhccCCcEEEEEecCC
Q 023870 70 --H-------ELPG-DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 70 --~-------~~~~-~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
+ ...- +.++.-+.++|+|||.|++..+.-
T Consensus 182 TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 182 TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 1 1112 566676788999999999998764
No 282
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=85.83 E-value=0.65 Score=41.59 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=48.0
Q ss_pred CCCCCcEEEEccCCCCcHHHHH--------------HHHHHHHHHhhhhCCCCeEEEeccCCCCC--CCC---CceeEEE
Q 023870 4 GKMQSAVLALSEDKILPVSAVL--------------NAIRDLGDEAVEQCDPQIITQASSLSQLP--VES---FSIDTVL 64 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~--------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp--~~~---~sfD~V~ 64 (276)
++.|..||+++.|.+..+..+. +.|++.|++++...+.++.++++++..++ +.. .+||.|+
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGIL 103 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEE
Confidence 4578899999999876533332 77889898887665567999999998876 222 5899999
Q ss_pred ecc
Q 023870 65 SIS 67 (276)
Q Consensus 65 s~~ 67 (276)
+..
T Consensus 104 ~D~ 106 (301)
T 1m6y_A 104 MDL 106 (301)
T ss_dssp EEC
T ss_pred EcC
Confidence 754
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=85.13 E-value=3.7 Score=37.99 Aligned_cols=114 Identities=10% Similarity=-0.130 Sum_probs=66.8
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHHHHHHHHHhhh-----------hCCCCeEEEeccCCCCCCCCCceeEEEecccccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNAIRDLGDEAVE-----------QCDPQIITQASSLSQLPVESFSIDTVLSISSSHE 71 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~-----------~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~ 71 (276)
.++.|+.|++++...+. +. ..+.++. .++- .....|.++++|+.....+...||+|+|=++.+.
T Consensus 208 ~l~~G~~vlDLGAaPGG--WT--~~l~~rg-~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 208 RLANGMWAVDLGACPGG--WT--YQLVKRN-MWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp HSCTTCEEEEETCTTCH--HH--HHHHHTT-CEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred cCCCCCEEEEeCcCCCH--HH--HHHHHCC-CEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCCh
Confidence 46789999999877642 32 2222221 0110 1235689999999888877889999999765432
Q ss_pred CChHHHHHHHHHhccCCcEEEEEecC-CCCchhHHHHHHHHHHHHHHCCCc
Q 023870 72 LPGDQLLEEISRVLKPGGTILIYKKL-TSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 72 ~~~~~~l~ei~rvLKPgG~l~i~~~~-~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
.....++..+...+..++.++..-.. ......+...++.+...+..+||.
T Consensus 283 ~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 283 AKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcc
Confidence 11133444444444444555443332 222234555566778888999986
No 284
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=84.22 E-value=0.19 Score=43.93 Aligned_cols=83 Identities=10% Similarity=-0.091 Sum_probs=45.6
Q ss_pred CCCCcEEEEccCCCCcHHHHH------------H-------HHHHHHHHhhhhCC--CCeEEEeccCCCC-C-CCC--Cc
Q 023870 5 KMQSAVLALSEDKILPVSAVL------------N-------AIRDLGDEAVEQCD--PQIITQASSLSQL-P-VES--FS 59 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~------------~-------~m~~~A~~~~~~~~--~~v~~~~~d~~~l-p-~~~--~s 59 (276)
..|.+||+++.|.+.-+..+. + .|++.|++++...+ .++.++++|+.++ + +++ ++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 456788998888764322111 4 77777766554333 2489999998874 3 555 79
Q ss_pred eeEEEeccccccCChHHHHHHHHHhccC
Q 023870 60 IDTVLSISSSHELPGDQLLEEISRVLKP 87 (276)
Q Consensus 60 fD~V~s~~~l~~~~~~~~l~ei~rvLKP 87 (276)
||+|++.-.+++......+++..+.|++
T Consensus 162 fD~V~~dP~~~~~~~sa~vkk~~~~l~~ 189 (258)
T 2r6z_A 162 PDIVYLDPMYPERRKSAAVKKEMAYFHR 189 (258)
T ss_dssp CSEEEECCCC-------------HHHHH
T ss_pred ccEEEECCCCCCcccchHHHHHHHHhhh
Confidence 9999987655442222233334444444
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=83.38 E-value=1.7 Score=42.10 Aligned_cols=76 Identities=9% Similarity=0.067 Sum_probs=47.2
Q ss_pred EeccCCCCC-CCCCceeEEEecccccc-------------------------CCh-----HHHHHHHHHhccCCcEEEEE
Q 023870 46 QASSLSQLP-VESFSIDTVLSISSSHE-------------------------LPG-----DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 46 ~~~d~~~lp-~~~~sfD~V~s~~~l~~-------------------------~~~-----~~~l~ei~rvLKPgG~l~i~ 94 (276)
.++|....+ ++...||+|+++-.+.. ++. -.++..+.+.|||||++.+.
T Consensus 315 ~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiV 394 (544)
T 3khk_A 315 KNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALL 394 (544)
T ss_dssp SSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEE
T ss_pred eccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEE
Confidence 556654333 55679999999654321 111 25899999999999999888
Q ss_pred ecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 95 KKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 95 ~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
.+.. .+.........+++.|...+.+.
T Consensus 395 lP~g-~L~~~~~~~~~iRk~Lle~~~l~ 421 (544)
T 3khk_A 395 LANG-SMSSNTNNEGEIRKTLVEQDLVE 421 (544)
T ss_dssp EETH-HHHCCGGGHHHHHHHHHHTTCEE
T ss_pred ecch-hhhcCcchHHHHHHHHHhCCcHh
Confidence 7542 11000011236677777777654
No 286
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=82.57 E-value=1.5 Score=40.37 Aligned_cols=57 Identities=23% Similarity=0.152 Sum_probs=38.6
Q ss_pred CCeEEEeccCCCCC-CCCCceeEEEe----cc---c-cc------c-CC--------h--HHHHHHHHHhccCCcEEEEE
Q 023870 41 PQIITQASSLSQLP-VESFSIDTVLS----IS---S-SH------E-LP--------G--DQLLEEISRVLKPGGTILIY 94 (276)
Q Consensus 41 ~~v~~~~~d~~~lp-~~~~sfD~V~s----~~---~-l~------~-~~--------~--~~~l~ei~rvLKPgG~l~i~ 94 (276)
.++.+...|...++ +..+.||.|+. +. . +. | +. . .++|....+.|||||+|+.+
T Consensus 204 ~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYs 283 (359)
T 4fzv_A 204 NQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYS 283 (359)
T ss_dssp SSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 35777778877664 45679999996 11 0 00 1 11 1 35788889999999999887
Q ss_pred ecC
Q 023870 95 KKL 97 (276)
Q Consensus 95 ~~~ 97 (276)
+=+
T Consensus 284 TCS 286 (359)
T 4fzv_A 284 TCS 286 (359)
T ss_dssp ESC
T ss_pred eCC
Confidence 744
No 287
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=82.46 E-value=9 Score=36.98 Aligned_cols=115 Identities=15% Similarity=0.012 Sum_probs=71.0
Q ss_pred CCCcEEEEccCCCCcHHHH-----------------HHHHHHHHHHhhhhCCC---CeEEEeccCCCC--C-CCCCceeE
Q 023870 6 MQSAVLALSEDKILPVSAV-----------------LNAIRDLGDEAVEQCDP---QIITQASSLSQL--P-VESFSIDT 62 (276)
Q Consensus 6 ~g~~vL~v~~~~~~~~~~v-----------------~~~m~~~A~~~~~~~~~---~v~~~~~d~~~l--p-~~~~sfD~ 62 (276)
.|.+|++...|.+.-+..+ .+.+.++|+.+....+. .+.+.++|.... | +....||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 5678888877776432111 14566666655444443 367788887655 4 45678999
Q ss_pred EEecccc--cc-----------------CC-----hHHHHHHHHHhcc-CCcEEEEEecCCCCchhHHHHHHHHHHHHHH
Q 023870 63 VLSISSS--HE-----------------LP-----GDQLLEEISRVLK-PGGTILIYKKLTSDKGDVDKAISALEGKLLL 117 (276)
Q Consensus 63 V~s~~~l--~~-----------------~~-----~~~~l~ei~rvLK-PgG~l~i~~~~~~~~~~~~~~~~~l~~~l~l 117 (276)
|+++-.+ .| ++ +-.++.++.+.|| |||++.+..+.. .+.. ......+++.|..
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g-~Lf~-~~~~~~iRk~Lle 378 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG-VLFR-GNAEGTIRKALLE 378 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH-HHHC-CTHHHHHHHHHHH
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch-HhhC-CchhHHHHHHHHh
Confidence 9986332 11 11 0248999999999 999998887652 1100 0112367777777
Q ss_pred CCCcc
Q 023870 118 AGFLD 122 (276)
Q Consensus 118 aGF~~ 122 (276)
.+.+.
T Consensus 379 ~~~l~ 383 (542)
T 3lkd_A 379 EGAID 383 (542)
T ss_dssp TTCEE
T ss_pred CCcee
Confidence 77654
No 288
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=80.99 E-value=0.66 Score=52.82 Aligned_cols=42 Identities=17% Similarity=0.152 Sum_probs=16.3
Q ss_pred CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEec
Q 023870 55 VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 55 ~~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+...+||+|++.+++|...+ ...|.++++.|||||++++.+.
T Consensus 1307 ~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1307 GSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -----CCEEEEECC--------------------CCEEEEEEC
T ss_pred CCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 34568999999999987776 7899999999999999998764
No 289
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=80.76 E-value=0.91 Score=39.74 Aligned_cols=86 Identities=13% Similarity=-0.036 Sum_probs=48.5
Q ss_pred CCCC--CcEEEEccCCCCcHHHHH------------HHHHHHHHHhh-------hhCC---CCeEEEeccCCC-CCCCCC
Q 023870 4 GKMQ--SAVLALSEDKILPVSAVL------------NAIRDLGDEAV-------EQCD---PQIITQASSLSQ-LPVESF 58 (276)
Q Consensus 4 ~~~g--~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~-------~~~~---~~v~~~~~d~~~-lp~~~~ 58 (276)
++.| .+||+++.|.+..+-.+. +.|.+++++.+ ...+ .+++++.+|+.+ ++.-..
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~ 163 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITP 163 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSS
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcc
Confidence 4566 899999999875422111 43333332221 1111 348899999875 342234
Q ss_pred ceeEEEeccccccCChHHHHHHHHHhccCCc
Q 023870 59 SIDTVLSISSSHELPGDQLLEEISRVLKPGG 89 (276)
Q Consensus 59 sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG 89 (276)
+||+|+..-.+++-.....+++..++|++.+
T Consensus 164 ~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 164 RPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp CCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred cCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 7999998765554322556777888888765
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=80.58 E-value=1.7 Score=38.57 Aligned_cols=87 Identities=9% Similarity=0.038 Sum_probs=56.1
Q ss_pred HHHHHHHhhhhCC---CCeEEEeccCC-CCC-CCCCceeEEEeccccccCCh-HHHHHHHHHhccCCcEEEEEecCCCCc
Q 023870 28 IRDLGDEAVEQCD---PQIITQASSLS-QLP-VESFSIDTVLSISSSHELPG-DQLLEEISRVLKPGGTILIYKKLTSDK 101 (276)
Q Consensus 28 m~~~A~~~~~~~~---~~v~~~~~d~~-~lp-~~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvLKPgG~l~i~~~~~~~~ 101 (276)
+.+.+++.....+ .+|.++.+++. .+| ++..+||+|+.=.-. ... ...|..+++.|+|||.+++-+... +.
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~~~-~~ 249 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDYMM-CP 249 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSCTT-CH
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCCCC-CH
Confidence 4555666665554 35999999885 454 456789999875432 122 578999999999999999877631 12
Q ss_pred hhHHHHHHHHHHHHHHCCCc
Q 023870 102 GDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 102 ~~~~~~~~~l~~~l~laGF~ 121 (276)
...+ ++...+...|+.
T Consensus 250 -G~~~---Av~Ef~~~~~i~ 265 (282)
T 2wk1_A 250 -PCKD---AVDEYRAKFDIA 265 (282)
T ss_dssp -HHHH---HHHHHHHHTTCC
T ss_pred -HHHH---HHHHHHHhcCCc
Confidence 2233 444445555643
No 291
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=78.21 E-value=1.8 Score=37.40 Aligned_cols=41 Identities=12% Similarity=0.233 Sum_probs=27.3
Q ss_pred HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcch
Q 023870 75 DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 75 ~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v 123 (276)
...+.+++|+|+|+|.+++.... ... ..+...+...||.-.
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~~d----~~~----~~~~~~~~~~gf~~~ 94 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFNTP----FNC----AFICQYLVSKGMIFQ 94 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECH----HHH----HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEcCc----HHH----HHHHHHHHhhcccee
Confidence 56888999999999999887411 111 133445667788543
No 292
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=76.55 E-value=3.8 Score=35.38 Aligned_cols=64 Identities=5% Similarity=-0.058 Sum_probs=44.1
Q ss_pred CCCCCcEEEEccCCCCcHHHHH-------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCC-----ceeEEEe
Q 023870 4 GKMQSAVLALSEDKILPVSAVL-------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESF-----SIDTVLS 65 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~-------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~-----sfD~V~s 65 (276)
++.|++||.|+.|.+.-.. +. +.|++.++++.... .++.++++|+..+++++. ..+.|++
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~~-~~v~~i~~D~~~~~~~~~~~~~~~~~~vvs 96 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDAMTFNFGELAEKMGQPLRVFG 96 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCGGGCCHHHHHHHHTSCEEEEE
T ss_pred CCCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhccC-CceEEEECchhhCCHHHhhcccCCceEEEE
Confidence 4678899999999875433 21 56777776654332 368999999999887542 3467777
Q ss_pred cccc
Q 023870 66 ISSS 69 (276)
Q Consensus 66 ~~~l 69 (276)
+..+
T Consensus 97 NlPY 100 (252)
T 1qyr_A 97 NLPY 100 (252)
T ss_dssp ECCT
T ss_pred CCCC
Confidence 7654
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=75.42 E-value=4.2 Score=36.10 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=54.9
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHHHH-------HHHH---Hh-h--hhCCCCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNAIR-------DLGD---EA-V--EQCDPQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~m~-------~~A~---~~-~--~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
.++++++||+++.+.+.=...+...+- .+.. .. . ...+.++.+...+++-..++...||+|+|-.+.
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmAp 166 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIGE 166 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCcc
Confidence 578899999997776532211111110 0000 00 0 011223444444444445678899999996655
Q ss_pred c----cCCh---HHHHHHHHHhccCC--cEEEEEecCC
Q 023870 70 H----ELPG---DQLLEEISRVLKPG--GTILIYKKLT 98 (276)
Q Consensus 70 ~----~~~~---~~~l~ei~rvLKPg--G~l~i~~~~~ 98 (276)
+ ++.. -.+|.-+.++|||| |.|++..+.+
T Consensus 167 nsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 167 SSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 4 2221 23566678999999 9999998874
No 294
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=73.45 E-value=2.7 Score=37.71 Aligned_cols=55 Identities=22% Similarity=0.262 Sum_probs=37.7
Q ss_pred eEEE-eccCCC-C-CCCCCceeEEEeccccc-----------cCCh-HHHHHHHHHhccCCcEEEEEecC
Q 023870 43 IITQ-ASSLSQ-L-PVESFSIDTVLSISSSH-----------ELPG-DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 43 v~~~-~~d~~~-l-p~~~~sfD~V~s~~~l~-----------~~~~-~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
...+ .+|... + .+++++||+|++--... |+.- ...|.+++|+|+|||.+++....
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 4455 787643 2 25678999999843221 1112 67888999999999999887543
No 295
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=70.75 E-value=13 Score=31.77 Aligned_cols=76 Identities=9% Similarity=0.010 Sum_probs=47.8
Q ss_pred CCCCCcEEEEccCCCCcHHHH-------------HHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCc-eeEEEecccc
Q 023870 4 GKMQSAVLALSEDKILPVSAV-------------LNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFS-IDTVLSISSS 69 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v-------------~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~s-fD~V~s~~~l 69 (276)
+..|++||.++.|.+.-...+ .+.|++.++++ ...++.++++|+..+++++.. ...|+++..+
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy 105 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKFPFCSLGKELKVVGNLPY 105 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCCGGGSCSSEEEEEECCT
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCChhHccCCcEEEEECch
Confidence 457889999999976432222 27778877765 235689999999999887532 2255665543
Q ss_pred ccCChHHHHHHHHHh
Q 023870 70 HELPGDQLLEEISRV 84 (276)
Q Consensus 70 ~~~~~~~~l~ei~rv 84 (276)
+ + ...++.++.+.
T Consensus 106 ~-i-~~~il~~ll~~ 118 (249)
T 3ftd_A 106 N-V-ASLIIENTVYN 118 (249)
T ss_dssp T-T-HHHHHHHHHHT
T ss_pred h-c-cHHHHHHHHhc
Confidence 3 2 23444555443
No 296
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=68.20 E-value=17 Score=32.39 Aligned_cols=55 Identities=13% Similarity=0.068 Sum_probs=36.3
Q ss_pred EEEeccCCCCCCCCCceeEEEeccccc---cCCh----HHHHHHHHHhccCC-cEEEEEecCC
Q 023870 44 ITQASSLSQLPVESFSIDTVLSISSSH---ELPG----DQLLEEISRVLKPG-GTILIYKKLT 98 (276)
Q Consensus 44 ~~~~~d~~~lp~~~~sfD~V~s~~~l~---~~~~----~~~l~ei~rvLKPg-G~l~i~~~~~ 98 (276)
......+.-..+....||+|++-.+.+ +..+ ..+|.-+.++|+|| |.|++..+.+
T Consensus 132 v~~~~~~di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~ 194 (300)
T 3eld_A 132 VKFKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAP 194 (300)
T ss_dssp EEEECSCCTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESST
T ss_pred EEeecCceeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 333333343445678999999965544 1112 24566678999999 9999998763
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=65.51 E-value=27 Score=30.66 Aligned_cols=92 Identities=15% Similarity=0.009 Sum_probs=52.0
Q ss_pred CCCCCCcEEEEccCCCCcHHHHHHHHH-HHHH--Hh-------hh-h----CCCC-eEEEec-cCCCCCCCCCceeEEEe
Q 023870 3 TGKMQSAVLALSEDKILPVSAVLNAIR-DLGD--EA-------VE-Q----CDPQ-IITQAS-SLSQLPVESFSIDTVLS 65 (276)
Q Consensus 3 ~~~~g~~vL~v~~~~~~~~~~v~~~m~-~~A~--~~-------~~-~----~~~~-v~~~~~-d~~~lp~~~~sfD~V~s 65 (276)
.+++|+.|++++...+ .+.-+...+ .... .. .. - .+.+ +.++++ |+..+ +...||+|+|
T Consensus 70 likpg~~VVDLGaAPG--GWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLS 145 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRG--GWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLC 145 (269)
T ss_dssp SCCCCEEEEEETCTTS--HHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEE
T ss_pred CCCCCCEEEEcCCCCC--HHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCC--CCCCCCEEEe
Confidence 5899999999987764 332221111 0000 00 00 0 1112 244446 77664 3558999999
Q ss_pred ccccc---cCCh-H---HHHHHHHHhccCCc-EEEEEecCC
Q 023870 66 ISSSH---ELPG-D---QLLEEISRVLKPGG-TILIYKKLT 98 (276)
Q Consensus 66 ~~~l~---~~~~-~---~~l~ei~rvLKPgG-~l~i~~~~~ 98 (276)
=++.. +.-+ . .+|.-+.++|+||| .|++..+..
T Consensus 146 DMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 146 DIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 44322 1112 1 24655669999999 999988873
No 298
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=57.31 E-value=15 Score=32.88 Aligned_cols=41 Identities=20% Similarity=0.155 Sum_probs=30.1
Q ss_pred CceeEEEeccc----ccc-C--Ch-----HHHHHHHHHhccCCcEEEEEecCC
Q 023870 58 FSIDTVLSISS----SHE-L--PG-----DQLLEEISRVLKPGGTILIYKKLT 98 (276)
Q Consensus 58 ~sfD~V~s~~~----l~~-~--~~-----~~~l~ei~rvLKPgG~l~i~~~~~ 98 (276)
..||+|++.+. .|+ - .| .-++.-..++|+|||.|++..+.-
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 56999999653 344 2 22 235666789999999999999874
No 299
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=56.84 E-value=8.2 Score=37.81 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=44.6
Q ss_pred eEEEeccCCC-CC-CC---CCceeEEEe-ccccccCC---hHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHH
Q 023870 43 IITQASSLSQ-LP-VE---SFSIDTVLS-ISSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEG 113 (276)
Q Consensus 43 v~~~~~d~~~-lp-~~---~~sfD~V~s-~~~l~~~~---~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~ 113 (276)
+....+|+.+ ++ +. ...||+|+. -++...-+ ..+++.+++|.++|||.+...... . .+++
T Consensus 158 l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~----~-------~vr~ 226 (676)
T 3ps9_A 158 LDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA----G-------FVRR 226 (676)
T ss_dssp EEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC----H-------HHHH
T ss_pred EEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc----H-------HHHH
Confidence 4456666642 22 11 467999987 22222222 378999999999999998744322 1 5667
Q ss_pred HHHHCCCcc
Q 023870 114 KLLLAGFLD 122 (276)
Q Consensus 114 ~l~laGF~~ 122 (276)
.|..+||..
T Consensus 227 ~L~~aGf~v 235 (676)
T 3ps9_A 227 GLQDAGFTM 235 (676)
T ss_dssp HHHHHTCEE
T ss_pred HHHhCCeEE
Confidence 788999963
No 300
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=53.61 E-value=96 Score=26.97 Aligned_cols=86 Identities=9% Similarity=0.093 Sum_probs=46.9
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEecc-----CCCCCCCCCceeEEEeccccccCChHHHHHHHH
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASS-----LSQLPVESFSIDTVLSISSSHELPGDQLLEEIS 82 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d-----~~~lp~~~~sfD~V~s~~~l~~~~~~~~l~ei~ 82 (276)
-+||+|+....=........|.+..++. .+..|.+.... .+.+.-.-..||+|+.......+ +....+.+.
T Consensus 5 ~kvLiv~G~~~H~~~~~~~~l~~~l~~~---g~f~V~~~~d~~~~~d~~~f~~~L~~~D~vV~~~~~~~l-~~~~~~~l~ 80 (281)
T 4e5v_A 5 IKTLLITGQNNHNWQVSHVVLKQILENS---GRFDVDFVISPEQGKDMSGFVLDFSPYQLVVLDYNGDSW-PEETNRRFL 80 (281)
T ss_dssp EEEEEEESCCSSCHHHHHHHHHHHHHHT---TSEEEEEEECCCTTSCCTTCCCCCTTCSEEEECCCSSCC-CHHHHHHHH
T ss_pred eEEEEEcCCCCCChHHHHHHHHHHHHhc---CCEEEEEEeCCccccchhHHhhhhhcCCEEEEeCCCCcC-CHHHHHHHH
Confidence 3688885554333455555555554432 11334443321 12121123579999954432222 356677788
Q ss_pred HhccCCcEEEEEecC
Q 023870 83 RVLKPGGTILIYKKL 97 (276)
Q Consensus 83 rvLKPgG~l~i~~~~ 97 (276)
+.++.||-|+..-..
T Consensus 81 ~yV~~Ggglv~~H~a 95 (281)
T 4e5v_A 81 EYVQNGGGVVIYHAA 95 (281)
T ss_dssp HHHHTTCEEEEEGGG
T ss_pred HHHHcCCCEEEEecc
Confidence 888889888776554
No 301
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=51.72 E-value=49 Score=33.84 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=36.2
Q ss_pred EEEeccCCCC-CCCCCceeEEEecccccc--CC--------------------------h--HHHHHHHHHhccCCcEEE
Q 023870 44 ITQASSLSQL-PVESFSIDTVLSISSSHE--LP--------------------------G--DQLLEEISRVLKPGGTIL 92 (276)
Q Consensus 44 ~~~~~d~~~l-p~~~~sfD~V~s~~~l~~--~~--------------------------~--~~~l~ei~rvLKPgG~l~ 92 (276)
.+...++... +.....||+|+++-.+.. .. + ..++..+.+.|+|||++.
T Consensus 383 ~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 383 TITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp EEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred eEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 4444555443 334678999999755411 00 1 346788999999999999
Q ss_pred EEecC
Q 023870 93 IYKKL 97 (276)
Q Consensus 93 i~~~~ 97 (276)
+..+.
T Consensus 463 fIlP~ 467 (878)
T 3s1s_A 463 AIMPK 467 (878)
T ss_dssp EEEET
T ss_pred EEECh
Confidence 88865
No 302
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=50.21 E-value=28 Score=30.27 Aligned_cols=62 Identities=5% Similarity=-0.023 Sum_probs=42.7
Q ss_pred CCCCCcEEEEccCCCCcHHHHH----------------HHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCC------cee
Q 023870 4 GKMQSAVLALSEDKILPVSAVL----------------NAIRDLGDEAVEQCDPQIITQASSLSQLPVESF------SID 61 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~----------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~------sfD 61 (276)
++.|++||.|+.|.+.-...+. +.|++.++++. ..++.++++|+..+++++- ...
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~~~ 116 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALTFDFGSIARPGDEPSL 116 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGGCCGGGGSCSSSSCCE
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhcCChhHhcccccCCce
Confidence 4678999999999875432221 56777777762 3468999999999987642 223
Q ss_pred EEEeccc
Q 023870 62 TVLSISS 68 (276)
Q Consensus 62 ~V~s~~~ 68 (276)
.|+++..
T Consensus 117 ~vv~NlP 123 (279)
T 3uzu_A 117 RIIGNLP 123 (279)
T ss_dssp EEEEECC
T ss_pred EEEEccC
Confidence 5666654
No 303
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=50.14 E-value=92 Score=24.51 Aligned_cols=110 Identities=13% Similarity=0.118 Sum_probs=52.2
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCC--------------------CCCCCceeEEEecc
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL--------------------PVESFSIDTVLSIS 67 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~l--------------------p~~~~sfD~V~s~~ 67 (276)
++||+|........+.+.+.+.+.+++. .+..+..+. +... .-.-..+|.|+..+
T Consensus 2 mkilii~~S~~g~t~~la~~i~~~l~~~---~g~~v~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gs 76 (198)
T 3b6i_A 2 AKVLVLYYSMYGHIETMARAVAEGASKV---DGAEVVVKR--VPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGT 76 (198)
T ss_dssp CEEEEEECCSSSHHHHHHHHHHHHHHTS---TTCEEEEEE--CCCCSCHHHHHHTTCCCCCSCBCCGGGGGGCSEEEEEE
T ss_pred CeEEEEEeCCCcHHHHHHHHHHHHHhhc---CCCEEEEEE--ccccCchhhhhhcccccccCchhhHHHHHHCCEEEEEe
Confidence 3677776665445566666666655430 233333322 2111 11123689988876
Q ss_pred ccccCCh----HHHHHHHHHh-----ccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 68 SSHELPG----DQLLEEISRV-----LKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 68 ~l~~~~~----~~~l~ei~rv-----LKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
..++..- ..++..+.+. |+-.=..++...+. .+........+...+...||..+.
T Consensus 77 P~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~--~g~~~~~l~~l~~~l~~~g~~~v~ 140 (198)
T 3b6i_A 77 PTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGT--GGGQEQTITSTWTTLAHHGMVIVP 140 (198)
T ss_dssp EEETTEECHHHHHHHTTCHHHHHHTTTTTCEEEEEEEESS--STTHHHHHHHHHHHHHHTTCEECC
T ss_pred ChhcCCchHHHHHHHHHhhhhhhhcccCCCEEEEEEeCCC--CccHHHHHHHHHHHHHHCCcEEEC
Confidence 6554332 3344433321 32111122222221 122233445666778888887654
No 304
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=49.31 E-value=7.1 Score=25.85 Aligned_cols=19 Identities=42% Similarity=1.011 Sum_probs=14.7
Q ss_pred CCccccCCCCCCCCCCCCCCCe
Q 023870 243 GDAFRCGTCPYKGLPPFKLGEK 264 (276)
Q Consensus 243 GDAFRC~~CPy~G~PaFkpGe~ 264 (276)
+|.|.|..|+|. -|+-++|
T Consensus 34 ~dr~~C~kCgyt---~~~~~~~ 52 (55)
T 2k4x_A 34 ADRYSCGRCGYT---EFKKAKK 52 (55)
T ss_dssp SSEEECTTTCCC---EECCCCC
T ss_pred CCEEECCCCCCE---EEeCccc
Confidence 589999999997 3665554
No 305
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=48.56 E-value=84 Score=23.61 Aligned_cols=110 Identities=12% Similarity=0.068 Sum_probs=53.0
Q ss_pred cEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCC-CC-ceeEEEeccccccC--Ch-HHHHHHHHH
Q 023870 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE-SF-SIDTVLSISSSHEL--PG-DQLLEEISR 83 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~-~~-sfD~V~s~~~l~~~--~~-~~~l~ei~r 83 (276)
+++++......+.+.+.+.+.+.+++ .+..+.. .++.+.+.. -. .+|.|+...+.+.. .. +..+..+.+
T Consensus 3 ki~I~y~S~tGnT~~~A~~ia~~l~~----~g~~v~~--~~~~~~~~~~l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~ 76 (148)
T 3f6r_A 3 KVLIVFGSSTGNTESIAQKLEELIAA----GGHEVTL--LNAADASAENLADGYDAVLFGCSAWGMEDLEMQDDFLSLFE 76 (148)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHHT----TTCEEEE--EETTTBCCTTTTTTCSEEEEEECEECSSSCEECHHHHHHHT
T ss_pred eEEEEEECCCchHHHHHHHHHHHHHh----CCCeEEE--EehhhCCHhHhcccCCEEEEEecccCCCCCCCcHHHHHHHH
Confidence 67777666655666666666554433 2333333 344443322 23 78988776654442 11 233344444
Q ss_pred hcc----CCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 84 VLK----PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 84 vLK----PgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
.|+ .|=.+.+.-.+...-.....+...+...|...|+..+.
T Consensus 77 ~l~~~~l~~k~~~vfg~G~~~y~~~~~a~~~l~~~l~~~G~~~~~ 121 (148)
T 3f6r_A 77 EFDRIGLAGRKVAAFASGDQEYEHFCGAVPAIEERAKELGATIIA 121 (148)
T ss_dssp TGGGTCCTTCEEEEEEEECTTSSSTTTHHHHHHHHHHHTTCEECS
T ss_pred HhhccCCCCCEEEEEEeCCCCHHHHHHHHHHHHHHHHHcCCEEee
Confidence 332 12222222221110011222334677788888987653
No 306
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=47.74 E-value=16 Score=35.89 Aligned_cols=70 Identities=21% Similarity=0.344 Sum_probs=46.1
Q ss_pred CeEEEeccCC-CCC-CC---CCceeEEEe-ccccccCC---hHHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHH
Q 023870 42 QIITQASSLS-QLP-VE---SFSIDTVLS-ISSSHELP---GDQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALE 112 (276)
Q Consensus 42 ~v~~~~~d~~-~lp-~~---~~sfD~V~s-~~~l~~~~---~~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~ 112 (276)
.+..+.+|+. .++ +. ...||.|+. -++...-+ ..+++..++|+++|||.+...... ..++
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~-----------~~vr 217 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA-----------GFVR 217 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC-----------HHHH
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc-----------HHHH
Confidence 3556777774 233 22 468999987 22222222 378999999999999998744322 1567
Q ss_pred HHHHHCCCcc
Q 023870 113 GKLLLAGFLD 122 (276)
Q Consensus 113 ~~l~laGF~~ 122 (276)
+.|..+||..
T Consensus 218 ~~l~~aGf~~ 227 (689)
T 3pvc_A 218 RGLQQAGFNV 227 (689)
T ss_dssp HHHHHTTCEE
T ss_pred HHHHhCCeEE
Confidence 7889999964
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=47.63 E-value=14 Score=32.11 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=41.4
Q ss_pred CCeEEEeccCCC-CC-----CCCCceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEecC
Q 023870 41 PQIITQASSLSQ-LP-----VESFSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 41 ~~v~~~~~d~~~-lp-----~~~~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.++.++.+++.+ +| .+...||+|+.=.-. +-+....+..++..|+|||.+++-+..
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 568999999863 44 245679999875421 112267899999999999999998874
No 308
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=46.56 E-value=87 Score=23.20 Aligned_cols=103 Identities=16% Similarity=0.059 Sum_probs=53.0
Q ss_pred EEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCC-CCCceeEEEecccccc---CC--h-HHHHHHHHH
Q 023870 11 LALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-ESFSIDTVLSISSSHE---LP--G-DQLLEEISR 83 (276)
Q Consensus 11 L~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~-~~~sfD~V~s~~~l~~---~~--~-~~~l~ei~r 83 (276)
+++......+.+.|.+.+.+..++. +..+... ++.+.+. .-..+|.|+...+.++ .+ . ..++..+..
T Consensus 2 ~I~Y~S~tGnT~~iA~~ia~~l~~~----g~~v~~~--~~~~~~~~~l~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~ 75 (138)
T 5nul_A 2 KIVYWSGTGNTEKMAELIAKGIIES----GKDVNTI--NVSDVNIDELLNEDILILGCSAMTDEVLEESEFEPFIEEIST 75 (138)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHHT----TCCCEEE--EGGGCCHHHHTTCSEEEEEECCBTTTBCCTTTHHHHHHHHGG
T ss_pred EEEEECCCchHHHHHHHHHHHHHHC----CCeEEEE--EhhhCCHHHHhhCCEEEEEcCccCCCCCChHHHHHHHHHHHh
Confidence 4555555556666777776655432 3344432 2333221 1246888887655443 23 2 566666655
Q ss_pred hccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcch
Q 023870 84 VLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 84 vLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v 123 (276)
.|+--=..++...... . ..+...+...|...|+..+
T Consensus 76 ~l~~k~~~~f~t~g~~--~--~~a~~~l~~~l~~~G~~~v 111 (138)
T 5nul_A 76 KISGKKVALFGSYGWG--D--GKWMRDFEERMNGYGCVVV 111 (138)
T ss_dssp GCTTCEEEEEEEESSS--C--SHHHHHHHHHHHHTTCEEC
T ss_pred hcCCCEEEEEEecCCC--C--ChHHHHHHHHHHHCCCEEE
Confidence 4432222333333221 1 1334577778888898865
No 309
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=46.13 E-value=31 Score=25.47 Aligned_cols=54 Identities=13% Similarity=0.127 Sum_probs=35.2
Q ss_pred cEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecc
Q 023870 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSIS 67 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~ 67 (276)
++|++-......+ -+...|.+.++++ +..+.+.+.++.++.-....||+|+...
T Consensus 5 kIll~Cg~G~sTS-~l~~k~~~~~~~~----gi~~~i~a~~~~~~~~~~~~~Dvil~~p 58 (106)
T 1e2b_A 5 HIYLFSSAGMSTS-LLVSKMRAQAEKY----EVPVIIEAFPETLAGEKGQNADVVLLGP 58 (106)
T ss_dssp EEEEECSSSTTTH-HHHHHHHHHHHHS----CCSEEEEEECSSSTTHHHHHCSEEEECT
T ss_pred EEEEECCCchhHH-HHHHHHHHHHHHC----CCCeEEEEecHHHHHhhccCCCEEEEcc
Confidence 5777754444433 5777888877654 5667777777776653235799998764
No 310
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=44.76 E-value=93 Score=23.04 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=46.2
Q ss_pred CCcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEeccccccCChHHHHHHHHHhcc
Q 023870 7 QSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSSHELPGDQLLEEISRVLK 86 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l~~~~~~~~l~ei~rvLK 86 (276)
..++|++..+... ..-++..|.+.|+++ +..+.........+.-.-..||+|+..--+. -.+.++.+...
T Consensus 6 ~mkIlL~C~aGmS-Tsllv~km~~~a~~~----gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~-----y~~~~ik~~~~ 75 (108)
T 3nbm_A 6 ELKVLVLCAGSGT-SAQLANAINEGANLT----EVRVIANSGAYGAHYDIMGVYDLIILAPQVR-----SYYREMKVDAE 75 (108)
T ss_dssp CEEEEEEESSSSH-HHHHHHHHHHHHHHH----TCSEEEEEEETTSCTTTGGGCSEEEECGGGG-----GGHHHHHHHHT
T ss_pred CceEEEECCCCCC-HHHHHHHHHHHHHHC----CCceEEEEcchHHHHhhccCCCEEEEChHHH-----HHHHHHHHHhh
Confidence 4578888666643 455888998888765 4666654444444432335699998753221 23566777777
Q ss_pred CCcEEEE
Q 023870 87 PGGTILI 93 (276)
Q Consensus 87 PgG~l~i 93 (276)
+-|.=+.
T Consensus 76 ~~~ipV~ 82 (108)
T 3nbm_A 76 RLGIQIV 82 (108)
T ss_dssp TTTCEEE
T ss_pred hcCCcEE
Confidence 7665433
No 311
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=44.28 E-value=45 Score=28.85 Aligned_cols=54 Identities=9% Similarity=0.019 Sum_probs=32.2
Q ss_pred CCCeEEEeccCCCCCC---CCCceeEEEecccc-ccCChHHHHHHHHHhccCCcEEEEEec
Q 023870 40 DPQIITQASSLSQLPV---ESFSIDTVLSISSS-HELPGDQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 40 ~~~v~~~~~d~~~lp~---~~~sfD~V~s~~~l-~~~~~~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+..|.++. ...++. .-+.||+|+..... .++. +..++.+.+..+-||-|++.-.
T Consensus 30 g~~V~~i~--~~~~~~~~~~L~~yDvIIl~d~~~~~l~-~~~~~~L~~yV~~GGgLi~~gG 87 (259)
T 3rht_A 30 QWEFDYIP--SHVGLDVGELLAKQDLVILSDYPAERMT-AQAIDQLVTMVKAGCGLVMLGG 87 (259)
T ss_dssp TCCCEEEC--TTSCBCSSHHHHTCSEEEEESCCGGGBC-HHHHHHHHHHHHTTCEEEEECS
T ss_pred CceEEEec--ccccccChhHHhcCCEEEEcCCccccCC-HHHHHHHHHHHHhCCeEEEecC
Confidence 35566533 334432 22489999876432 2343 4556667777778999887743
No 312
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=43.53 E-value=1e+02 Score=23.07 Aligned_cols=109 Identities=17% Similarity=0.071 Sum_probs=54.4
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCC-CCc-eeEEEecccccc-----CCh--HHHH
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE-SFS-IDTVLSISSSHE-----LPG--DQLL 78 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~-~~s-fD~V~s~~~l~~-----~~~--~~~l 78 (276)
++++++......+.+.+.+.+.+.+++. +..+... ++...+.. -.. +|.|+.....++ ++. ..++
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~----g~~v~~~--~~~~~~~~~l~~~~d~ii~~~p~y~~g~~~~p~~~~~fl 74 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADA----GYEVDSR--DAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLF 74 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHH----TCEEEEE--EGGGCCSTTTTTTCSEEEEEECEECSSSCEECTTTHHHH
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhc----CCeeEEE--ehhhCCHHHhcCcCCEEEEEeCCCCCCCcCCChhHHHHH
Confidence 3577776655556666777666655432 3333332 33332221 235 899887665542 242 5566
Q ss_pred HHHHH-hccCCcEE-EEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 79 EEISR-VLKPGGTI-LIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 79 ~ei~r-vLKPgG~l-~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
..+.+ .|+ |=.+ ++..... .-.....+...+...|...|+..+.
T Consensus 75 ~~l~~~~l~-~k~~~v~~~g~~-~~~~~~~a~~~l~~~l~~~g~~~~~ 120 (147)
T 1f4p_A 75 DSLEETGAQ-GRKVACFGCGDS-SWEYFCGAVDAIEEKLKNLGAEIVQ 120 (147)
T ss_dssp HTGGGSCCT-TCEEEEEEEECT-TSSSTTHHHHHHHHHHHHTTCEECS
T ss_pred HHHHhcccC-CCEEEEEeecCC-ChHHHHHHHHHHHHHHHHcCCeEhh
Confidence 65543 222 2222 2223211 1011333445777778888886543
No 313
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=42.72 E-value=49 Score=24.41 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=34.2
Q ss_pred EEEeccccccCCh--HHHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcch
Q 023870 62 TVLSISSSHELPG--DQLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 62 ~V~s~~~l~~~~~--~~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v 123 (276)
+|+-.....++.. -..|.++++.++.|+.+++....+ .+.+.+..+||...
T Consensus 49 vilDl~~v~~iDssgl~~L~~~~~~~~~g~~l~l~~~~~-----------~v~~~l~~~gl~~~ 101 (118)
T 3ny7_A 49 VILKWDAVPVLDAGGLDAFQRFVKRLPEGCELRVCNVEF-----------QPLRTMARAGIQPI 101 (118)
T ss_dssp EEEEEEECCCBCHHHHHHHHHHHHHCCTTCEEEEECCCH-----------HHHHHHHHTTCCCB
T ss_pred EEEEcCCCCeecHHHHHHHHHHHHHHHCCCEEEEecCCH-----------HHHHHHHHcCChhh
Confidence 3444444555554 567777888776688888887542 45567889998753
No 314
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=41.23 E-value=1.3e+02 Score=23.71 Aligned_cols=110 Identities=12% Similarity=0.055 Sum_probs=52.6
Q ss_pred cEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCC-CCceeEEEeccccccCCh----HHHHHHHHH
Q 023870 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVE-SFSIDTVLSISSSHELPG----DQLLEEISR 83 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~-~~sfD~V~s~~~l~~~~~----~~~l~ei~r 83 (276)
+|++|......+.+.+.+.+.+.+++. .+..+. .-++...+.. -..+|.|+..+..++..- ..++..+.+
T Consensus 6 kiliiy~S~~GnT~~~a~~i~~~l~~~---~g~~v~--~~~l~~~~~~~l~~aD~ii~gsP~y~g~~~~~lk~fld~~~~ 80 (188)
T 2ark_A 6 KVLVIYDTRTGNTKKMAELVAEGARSL---EGTEVR--LKHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLG 80 (188)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHTS---TTEEEE--EEETTTCCHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHTGG
T ss_pred EEEEEEECCCcHHHHHHHHHHHHHhhc---CCCeEE--EEEhhhCCHHHHHhCCEEEEEeCccCCcCCHHHHHHHHHHhh
Confidence 677776665555566666666554330 222233 3344443321 236899988766554332 344444433
Q ss_pred h--ccCCcEE--EEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 84 V--LKPGGTI--LIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 84 v--LKPgG~l--~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
. .+..|+- ++...+ +..+........+...+...||..+.
T Consensus 81 ~~~~~l~gk~~~~~~t~g-~~~g~~~~~l~~l~~~l~~~g~~~~~ 124 (188)
T 2ark_A 81 DLWGEIDGKIACAFSSSG-GWGGGNEVACMSILTMLMNFGFLVFG 124 (188)
T ss_dssp GTTTSCTTCEEEEEEEES-SBTSSHHHHHHHHHHHHHHTTCEECC
T ss_pred hhHHHhCCCeEEEEEECC-CCCCCHHHHHHHHHHHHHHCCcEEeC
Confidence 1 0112322 222211 11122233344566667778887553
No 315
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=41.14 E-value=15 Score=32.55 Aligned_cols=44 Identities=30% Similarity=0.316 Sum_probs=30.5
Q ss_pred CCCCCceeEEEeccc----cccCC---h-----HHHHHHHHHhccCCcEEEEEecC
Q 023870 54 PVESFSIDTVLSISS----SHELP---G-----DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 54 p~~~~sfD~V~s~~~----l~~~~---~-----~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
|-.-+.||+|+.+.. .||.. + +.+-....+.|+|||.+++.-.+
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYG 261 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYG 261 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECC
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeec
Confidence 333479999998653 35543 2 33445568899999999988765
No 316
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=40.09 E-value=51 Score=24.18 Aligned_cols=57 Identities=14% Similarity=0.130 Sum_probs=34.7
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
+++|++.......+ -+...|.+.++++ +..+.....++.+++-....+|+|++...+
T Consensus 5 mkIlvvC~~G~~TS-ll~~kl~~~~~~~----gi~~~i~~~~~~~~~~~~~~~D~Ii~t~~l 61 (109)
T 2l2q_A 5 MNILLVCGAGMSTS-MLVQRIEKYAKSK----NINATIEAIAETRLSEVVDRFDVVLLAPQS 61 (109)
T ss_dssp EEEEEESSSSCSSC-HHHHHHHHHHHHH----TCSEEEEEECSTTHHHHTTTCSEEEECSCC
T ss_pred eEEEEECCChHhHH-HHHHHHHHHHHHC----CCCeEEEEecHHHHHhhcCCCCEEEECCcc
Confidence 56777755554444 5667777766553 445555556666654223579999886543
No 317
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.54 E-value=1.2e+02 Score=22.41 Aligned_cols=57 Identities=4% Similarity=0.093 Sum_probs=32.0
Q ss_pred cEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCCCceeEEEecccc
Q 023870 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVESFSIDTVLSISSS 69 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~~sfD~V~s~~~l 69 (276)
++|++-......+.-+...|.+.+++ .+..+.....++.+++-....+|+|++...+
T Consensus 23 kIlvvC~sG~gTS~ll~~kl~~~~~~----~gi~~~V~~~~~~~~~~~~~~~DlIist~~l 79 (113)
T 1tvm_A 23 KIIVACGGAVATSTMAAEEIKELCQS----HNIPVELIQCRVNEIETYMDGVHLICTTARV 79 (113)
T ss_dssp EEEEESCSCSSHHHHHHHHHHHHHHH----TTCCEEEEEECTTTTTTSTTSCSEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHH----cCCeEEEEEecHHHHhhccCCCCEEEECCcc
Confidence 56666444433333345666665544 3445555555666665334579999986543
No 318
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=38.11 E-value=24 Score=32.18 Aligned_cols=23 Identities=35% Similarity=0.472 Sum_probs=21.3
Q ss_pred HHHHHHHHHhccCCcEEEEEecC
Q 023870 75 DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 75 ~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+.+|..+.++|+|||+|++..+.
T Consensus 254 ~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHhCCCCEEEEEecC
Confidence 78899999999999999999986
No 319
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=37.69 E-value=17 Score=32.28 Aligned_cols=23 Identities=30% Similarity=0.626 Sum_probs=21.3
Q ss_pred HHHHHHHHHhccCCcEEEEEecC
Q 023870 75 DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 75 ~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+.+|..+.++|+|||++.+..+.
T Consensus 213 ~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCEEEEEecC
Confidence 78999999999999999999876
No 320
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=36.89 E-value=1.5e+02 Score=23.21 Aligned_cols=109 Identities=11% Similarity=0.018 Sum_probs=52.9
Q ss_pred cEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCC-------------------C-CCCceeEEEeccc
Q 023870 9 AVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-------------------V-ESFSIDTVLSISS 68 (276)
Q Consensus 9 ~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp-------------------~-~~~sfD~V~s~~~ 68 (276)
+||+|........+.+.+.+.+.+++ .+..++.+ ++...+ . .-..+|.|+..+.
T Consensus 7 kilii~~S~~g~T~~la~~i~~~l~~----~g~~v~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP 80 (200)
T 2a5l_A 7 YILVLYYSRHGATAEMARQIARGVEQ----GGFEARVR--TVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSP 80 (200)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHH----TTCEEEEE--BCCCEEC-------------CCBCCHHHHHTCSEEEEEEE
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHhh----CCCEEEEE--EhhhccchhhhhccccccccCchhhHHHHHHCCEEEEEcC
Confidence 78888666555566666666665543 23333322 222210 0 1125899887766
Q ss_pred cccCCh----HHHHHHHHHh-----ccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 69 SHELPG----DQLLEEISRV-----LKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 69 l~~~~~----~~~l~ei~rv-----LKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
.++..- ..++..+.+. |+-.=..++...+. ..+....+...+...+...|+..+.
T Consensus 81 ~y~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~-~~~~~~~~~~~l~~~l~~~g~~~~~ 144 (200)
T 2a5l_A 81 TRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTAS-LHGGQETTQLSMLLPLLHHGMLVLG 144 (200)
T ss_dssp CBTTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSC-SSCCHHHHHHHHHHHHHHTTCEECC
T ss_pred hhccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecCC-CCCCHHHHHHHHHHHHHHCCCEEEC
Confidence 555332 3444444331 22111222333221 1112234455677778888887654
No 321
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=35.06 E-value=22 Score=25.35 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=9.9
Q ss_pred CCCCCCCCeEEec
Q 023870 256 LPPFKLGEKVSLS 268 (276)
Q Consensus 256 ~PaFkpGe~v~l~ 268 (276)
+-.||+|++|.+.
T Consensus 45 l~~lk~Gd~V~F~ 57 (82)
T 2l55_A 45 PQGLKAGDRVAFS 57 (82)
T ss_dssp CSSCSTTCEEEEE
T ss_pred hhcCCCCCEEEEE
Confidence 3458999999875
No 322
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=34.70 E-value=1.5e+02 Score=23.64 Aligned_cols=30 Identities=7% Similarity=-0.061 Sum_probs=18.7
Q ss_pred CCCCcEEEEccCCCCcHHHHHHHHHHHHHH
Q 023870 5 KMQSAVLALSEDKILPVSAVLNAIRDLGDE 34 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~~~m~~~A~~ 34 (276)
+.-++||+|........+.+.+.+.+.+++
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~ 33 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRA 33 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhc
Confidence 334688888766655566666666665543
No 323
>3u28_C H/ACA ribonucleoprotein complex subunit 1; pseudouridine synthase, pseudouridylation, H/ACA RNA; 1.90A {Saccharomyces cerevisiae} PDB: 3uai_C
Probab=34.31 E-value=16 Score=27.86 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=14.5
Q ss_pred CCCCCCC--CCCCCeEEecCccc
Q 023870 252 PYKGLPP--FKLGEKVSLSSNFL 272 (276)
Q Consensus 252 Py~G~Pa--FkpGe~v~l~~~~l 272 (276)
|+-|+.| ||.|+|+-|+.++|
T Consensus 84 ~~~gv~a~Sfk~gdk~YId~~kl 106 (114)
T 3u28_C 84 CGDGVQATSFKEGDKFYIAADKL 106 (114)
T ss_dssp ECTTCCGGGCCTTCEEEEEGGGE
T ss_pred ecCCCcccccccCCEEEECcccc
Confidence 3456666 78888888777665
No 324
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=34.17 E-value=85 Score=24.85 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=16.7
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHH
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDE 34 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~ 34 (276)
++||+|... ....+.+.+.+.+.+++
T Consensus 5 mkilii~~S-~g~T~~la~~i~~~l~~ 30 (199)
T 2zki_A 5 PNILVLFYG-YGSIVELAKEIGKGAEE 30 (199)
T ss_dssp CEEEEEECC-SSHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeC-ccHHHHHHHHHHHHHHh
Confidence 578888666 55566666666665543
No 325
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=32.76 E-value=33 Score=33.56 Aligned_cols=41 Identities=22% Similarity=0.295 Sum_probs=29.2
Q ss_pred CCceeEEEecc----ccccCC---h-----HHHHHHHHHhccCCcEEEEEecC
Q 023870 57 SFSIDTVLSIS----SSHELP---G-----DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 57 ~~sfD~V~s~~----~l~~~~---~-----~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
...||+|+.+. -.||.. + +.+-....+.|||||.+++.-.+
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG 271 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG 271 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee
Confidence 46999999864 345543 2 33445678999999999988654
No 326
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=32.08 E-value=1.7e+02 Score=22.48 Aligned_cols=107 Identities=12% Similarity=-0.025 Sum_probs=54.9
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC-----CceeEEEeccccccCCh--HHHHHH
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSISSSHELPG--DQLLEE 80 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~-----~sfD~V~s~~~l~~~~~--~~~l~e 80 (276)
++|++++.....+-+.|.+.+.+..++ .+..+.. -++...+..+ ..||.|+..++.++-.. ..++..
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~----~g~~v~~--~~~~~~~~~~~~~~~~~~d~ii~Gspty~g~~p~~~fl~~ 74 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVK----TGVAVEM--VDLRAVDPQELIEAVSSARGIVLGTPPSQPSEAVATALST 74 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHH----TTCCEEE--EETTTCCHHHHHHHHHHCSEEEEECCBSSCCHHHHHHHHH
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHh----CCCeEEE--EECCCCCHHHHHHHHHhCCEEEEEcCCcCCchhHHHHHHH
Confidence 467777776666777777777665543 2334433 2333332221 25898887655443222 356666
Q ss_pred HHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 81 ISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 81 i~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
+....- .|+.+..-..-++... +...+...|...||..+.
T Consensus 75 l~~~~l-~gk~v~~fgs~g~~g~---a~~~l~~~l~~~G~~~v~ 114 (161)
T 3hly_A 75 IFAAAH-NKQAIGLFDSYGGDDE---PIDALLAQFRNLGLHTAF 114 (161)
T ss_dssp HHHHCC-TTSEEEEECCCCSSBC---CHHHHHHHHHHTTCEESS
T ss_pred HHhhhh-CCCEEEEEEcCCCCcH---HHHHHHHHHHHCCCEEec
Confidence 554322 2333222222222122 223667778888987653
No 327
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=31.23 E-value=30 Score=30.55 Aligned_cols=23 Identities=26% Similarity=0.580 Sum_probs=21.1
Q ss_pred HHHHHHHHHhccCCcEEEEEecC
Q 023870 75 DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 75 ~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
+.+|....++|+|||++.+..+.
T Consensus 225 ~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 225 KEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHHHhhCCCCEEEEEecC
Confidence 77899999999999999999876
No 328
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=29.94 E-value=1.9e+02 Score=25.17 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=24.7
Q ss_pred ceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEec
Q 023870 59 SIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 59 sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
.||+|+-..... ..+....+.|+|+|++++.-.
T Consensus 234 ~~D~vid~~g~~-----~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 234 ELDFIISTIPTH-----YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp CEEEEEECCCSC-----CCHHHHHTTEEEEEEEEECCC
T ss_pred CCCEEEECCCcH-----HHHHHHHHHHhcCCEEEEECC
Confidence 689988654321 247889999999999987744
No 329
>1gl0_I Protease inhibitor LCMI I; hydrolase/inhibitor, complex (protease/inhibitor), hydrolase, serine protease, serine protease inhibitor; 3.0A {Locusta migratoria} SCOP: g.4.1.1
Probab=29.63 E-value=13 Score=22.35 Aligned_cols=18 Identities=28% Similarity=0.959 Sum_probs=13.9
Q ss_pred CCCCCC-CcccCCCCCccc
Q 023870 195 GDCEVG-STRKACKNCICG 212 (276)
Q Consensus 195 ~~C~~~-~~~kack~ctcG 212 (276)
..|.+| .++.-|-.|+|.
T Consensus 2 ~~C~PG~~~k~~CN~C~C~ 20 (35)
T 1gl0_I 2 EKCTPGQVKQQDCNTCTCT 20 (35)
T ss_dssp -CCCTTCEEECSSCEEEEC
T ss_pred CccCCCcccccCCCccCCC
Confidence 358877 667889999996
No 330
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=29.50 E-value=1.9e+02 Score=22.24 Aligned_cols=109 Identities=11% Similarity=-0.001 Sum_probs=58.1
Q ss_pred CCCCcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCC-CCC-----CCceeEEEeccccccCCh---H
Q 023870 5 KMQSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQL-PVE-----SFSIDTVLSISSSHELPG---D 75 (276)
Q Consensus 5 ~~g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~l-p~~-----~~sfD~V~s~~~l~~~~~---~ 75 (276)
+...+|++++.....+-+.|.+.+.+.+++ .+..+.. -++... ... -..||.|+.....++ .. .
T Consensus 2 ~~~~kv~IvY~S~~GnT~~iA~~ia~~l~~----~g~~v~~--~~~~~~~~~~~~~~~~~~~d~ii~Gspty~-g~~p~~ 74 (159)
T 3fni_A 2 KAETSIGVFYVSEYGYSDRLAQAIINGITK----TGVGVDV--VDLGAAVDLQELRELVGRCTGLVIGMSPAA-SAASIQ 74 (159)
T ss_dssp CCCCEEEEEECTTSTTHHHHHHHHHHHHHH----TTCEEEE--EESSSCCCHHHHHHHHHTEEEEEEECCBTT-SHHHHH
T ss_pred CCCCEEEEEEECCChHHHHHHHHHHHHHHH----CCCeEEE--EECcCcCCHHHHHHHHHhCCEEEEEcCcCC-CCccHH
Confidence 345688888777767777777777765543 2333332 334333 211 124898887655443 22 3
Q ss_pred HHHHHHHHhccCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 76 QLLEEISRVLKPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 76 ~~l~ei~rvLKPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
.++..+....-+ |+.+..-.+-++... +...+...|...||..+.
T Consensus 75 ~~l~~l~~~~~~-~k~va~fgs~g~~~~---a~~~l~~~l~~~G~~~v~ 119 (159)
T 3fni_A 75 GALSTILGSVNE-KQAVGIFETGGGDDE---PIDPLLSKFRNLGLTTAF 119 (159)
T ss_dssp HHHHHHHHHCCT-TSEEEEECCSSSCBC---CHHHHHHHHHHTTCEESS
T ss_pred HHHHHHHhhccc-CCEEEEEEcCCCCcH---HHHHHHHHHHHCCCEEec
Confidence 566665544333 443333222222221 123666778888988654
No 331
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=29.43 E-value=1.7e+02 Score=26.01 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=40.0
Q ss_pred CCeEEEeccCCCCCC---------CCCceeEEEeccccccCCh---HHHHHHHHHhccCCcEEEEEecC
Q 023870 41 PQIITQASSLSQLPV---------ESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGGTILIYKKL 97 (276)
Q Consensus 41 ~~v~~~~~d~~~lp~---------~~~sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG~l~i~~~~ 97 (276)
.+..++.+|+.+... ..+...++++-.++++++. ..+++.+.+.. |+|.+++.+..
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 347788888876421 3356778888888899886 66777777766 88888777654
No 332
>4fib_A Uncharacterized protein YDHK; structural genomics, PSI-biology, northeast structural genom consortium, NESG, SR518A, DUF1541, PF07563; 2.00A {Bacillus subtilis subsp} PDB: 2ky9_A
Probab=27.64 E-value=32 Score=26.73 Aligned_cols=17 Identities=24% Similarity=0.428 Sum_probs=13.9
Q ss_pred CCCCCCCCCeEEecCcc
Q 023870 255 GLPPFKLGEKVSLSSNF 271 (276)
Q Consensus 255 G~PaFkpGe~v~l~~~~ 271 (276)
|-|+|++|.+|.|..+-
T Consensus 61 ~~~~~~~GseV~l~AdH 77 (129)
T 4fib_A 61 GDKTLQPGDQVILEASH 77 (129)
T ss_dssp TTCCCCTTCEEEBCCCS
T ss_pred CCCCCCCCCEEEEeccc
Confidence 57899999999987653
No 333
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=26.98 E-value=2.2e+02 Score=21.96 Aligned_cols=110 Identities=15% Similarity=0.040 Sum_probs=53.4
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCC-CCCceeEEEeccccc---cCCh--HHHHHHH
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-ESFSIDTVLSISSSH---ELPG--DQLLEEI 81 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~-~~~sfD~V~s~~~l~---~~~~--~~~l~ei 81 (276)
.+++++......+.+.|.+.|.+..++. +..+.... +..... .-..+|.|+.....+ .+++ ..++..+
T Consensus 10 ~ki~I~Y~S~tGnT~~~A~~ia~~l~~~----g~~v~~~~--~~~~~~~~l~~~d~ii~g~pt~g~G~~p~~~~~f~~~l 83 (167)
T 1ykg_A 10 PGITIISASQTGNARRVAEALRDDLLAA----KLNVKLVN--AGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFL 83 (167)
T ss_dssp --CEEEEECSSSHHHHHHHHHHHHHHHH----TCCCEEEE--GGGCCGGGGGGCSEEEEEEECBGGGBCCGGGHHHHHHH
T ss_pred CeEEEEEECCchHHHHHHHHHHHHHHHC----CCceEEee--hhhCCHHHhccCCeEEEEEcccCCCcCChhHHHHHHHH
Confidence 4677887777667777777776654432 23333322 222211 123688888766554 2343 5566665
Q ss_pred HHh--ccCCcEE-EEEecCCCCchhHHHHHHHHHHHHHHCCCcch
Q 023870 82 SRV--LKPGGTI-LIYKKLTSDKGDVDKAISALEGKLLLAGFLDA 123 (276)
Q Consensus 82 ~rv--LKPgG~l-~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v 123 (276)
... ....|+. .+...+..+-.........+...|...|+..+
T Consensus 84 ~~~~~~~l~~k~~avfg~G~~~y~~~~~a~~~l~~~l~~~G~~~v 128 (167)
T 1ykg_A 84 FSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERL 128 (167)
T ss_dssp TSTTCCCCTTCEEEEEEECCTTSSSTTHHHHHHHHHHHHHTCEES
T ss_pred HhccccccCCCEEEEEeecCCCHHHHHHHHHHHHHHHHHCCCeEe
Confidence 431 1122333 22221211111122334467777777787654
No 334
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=26.33 E-value=22 Score=29.35 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=20.2
Q ss_pred CCCCCCCC----CCccccCCCCCCCCCCCCCCCeEEecCcc
Q 023870 235 SACGSCGL----GDAFRCGTCPYKGLPPFKLGEKVSLSSNF 271 (276)
Q Consensus 235 ssCg~C~l----GDAFRC~~CPy~G~PaFkpGe~v~l~~~~ 271 (276)
-+||.||- ||. |.+|++-+. ||.-|++.-+.
T Consensus 67 ~~CG~Cyel~c~~~~--c~~cg~~~~----~g~SI~VtaTN 101 (181)
T 1wc2_A 67 QHCGQCIKLTTTGGY--VPGQGGPVR----EGLSKTFMITN 101 (181)
T ss_dssp TTTTCEEEEEEEEEE--CTTSCCCCC----TTCEEEEEEEE
T ss_pred ccCCCcEEEEcCCCC--cccccccCC----CCCeEEEEEec
Confidence 49999995 553 777765543 47666665443
No 335
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=25.59 E-value=3e+02 Score=23.98 Aligned_cols=72 Identities=15% Similarity=0.112 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhhh----CCCCeEEEeccCCCCC---------CCCCceeEEEeccccccCCh---HHHHHHHHHhccCCc
Q 023870 26 NAIRDLGDEAVEQ----CDPQIITQASSLSQLP---------VESFSIDTVLSISSSHELPG---DQLLEEISRVLKPGG 89 (276)
Q Consensus 26 ~~m~~~A~~~~~~----~~~~v~~~~~d~~~lp---------~~~~sfD~V~s~~~l~~~~~---~~~l~ei~rvLKPgG 89 (276)
+.+++..++.+.. ...+..++.+|+.+ . |..+.-=++++...+++++. ..+++.+...+.||+
T Consensus 134 P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs 212 (310)
T 2uyo_A 134 PKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGS 212 (310)
T ss_dssp HHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCe
Confidence 4555555554432 22346778888865 2 22223335566777888886 668888888888999
Q ss_pred EEEEEecCC
Q 023870 90 TILIYKKLT 98 (276)
Q Consensus 90 ~l~i~~~~~ 98 (276)
.+++.....
T Consensus 213 ~l~~d~~~~ 221 (310)
T 2uyo_A 213 RIAVETSPL 221 (310)
T ss_dssp EEEEECCCT
T ss_pred EEEEEecCC
Confidence 888776543
No 336
>1obo_A Flavodoxin; electron transfer, flavoprotein, electron transport; HET: FMN; 1.2A {Anabaena SP} SCOP: c.23.5.1 PDB: 2v5v_A* 1dx9_A 1rcf_A* 1flv_A* 1obv_A* 2v5u_A* 1ftg_A 1qhe_A 2kqu_A 3esy_A* 3esz_A* 3esx_A*
Probab=25.34 E-value=2.3e+02 Score=21.60 Aligned_cols=110 Identities=15% Similarity=0.055 Sum_probs=55.7
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCC-CCCceeEEEeccccccCCh-HHHHHHHHHhc
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPV-ESFSIDTVLSISSSHELPG-DQLLEEISRVL 85 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~-~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvL 85 (276)
++++++......+.+.+.+.+.+..... .+... ++...+. .-..||+|+..+..++... +..+..+.+.|
T Consensus 2 mkilIiY~S~tGnT~~vA~~ia~~l~~~------~v~~~--~~~~~~~~~l~~~d~ii~g~p~y~~g~~p~~~~~fl~~l 73 (169)
T 1obo_A 2 KKIGLFYGTQTGKTESVAEIIRDEFGND------VVTLH--DVSQAEVTDLNDYQYLIIGCPTLNIGELQSDWEGLYSEL 73 (169)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHCTT------TEEEE--ETTTCCGGGGGGCSEEEEEEEEETTTEECHHHHHHHTTG
T ss_pred CeEEEEEECCCchHHHHHHHHHHHhCcC------CcEEE--EcccCCHHHHhhCCEEEEEEeeCCCCcCCHHHHHHHHHh
Confidence 4688887776666666666665544321 23322 2333221 2246999988776554322 33344444444
Q ss_pred c----CCcEEEE-EecCCCCch-hHHHHHHHHHHHHHHCCCcchhh
Q 023870 86 K----PGGTILI-YKKLTSDKG-DVDKAISALEGKLLLAGFLDAQR 125 (276)
Q Consensus 86 K----PgG~l~i-~~~~~~~~~-~~~~~~~~l~~~l~laGF~~v~~ 125 (276)
+ .|-.+.+ .......-. ....+...+...+...|+..+..
T Consensus 74 ~~~~l~~k~~~~f~tg~~~~~~~~~~~a~~~l~~~l~~~g~~~~~~ 119 (169)
T 1obo_A 74 DDVDFNGKLVAYFGTGDQIGYADNFQDAIGILEEKISQRGGKTVGY 119 (169)
T ss_dssp GGCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHHHTTCEECCC
T ss_pred hhcCcCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 3 2333332 232211011 12344457777788888876543
No 337
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=24.24 E-value=2.3e+02 Score=24.90 Aligned_cols=107 Identities=9% Similarity=-0.072 Sum_probs=55.5
Q ss_pred CCcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCCCCC-----CceeEEEeccccccCC--h--HHH
Q 023870 7 QSAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLPVES-----FSIDTVLSISSSHELP--G--DQL 77 (276)
Q Consensus 7 g~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp~~~-----~sfD~V~s~~~l~~~~--~--~~~ 77 (276)
+.+++++......+.+.+.+.+.+.+++ .+..+.. -++...+..+ ..+|+|+.....++.. . ..+
T Consensus 252 ~~kv~i~y~S~~Gnt~~lA~~i~~~l~~----~g~~v~~--~~~~~~~~~~~~~~~~~~d~ii~gsp~~~~~~~~~~~~~ 325 (402)
T 1e5d_A 252 TNKVVIFYDSMWHSTEKMARVLAESFRD----EGCTVKL--MWCKACHHSQIMSEISDAGAVIVGSPTHNNGILPYVAGT 325 (402)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHHHH----TTCEEEE--EETTTSCHHHHHHHHHTCSEEEEECCCBTTBCCHHHHHH
T ss_pred CCcEEEEEECCChhHHHHHHHHHHHHHh----CCCeEEE--EECCCCCHHHHHHHHHHCCEEEEECCccCCCchHHHHHH
Confidence 5788888777766666666666654433 2333333 2343333222 4689988766544432 2 445
Q ss_pred HHHHHHhccCCcEE-EEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 78 LEEISRVLKPGGTI-LIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 78 l~ei~rvLKPgG~l-~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
+..+...--.|-.+ ++.... .. ..+...+...|...|+..+.
T Consensus 326 l~~l~~~~l~~k~~~~f~t~g--~~---~~a~~~l~~~l~~~G~~~~~ 368 (402)
T 1e5d_A 326 LQYIKGLRPQNKIGGAFGSFG--WS---GESTKVLAEWLTGMGFDMPA 368 (402)
T ss_dssp HHHHHHTCCCSCEEEEEEEES--SS---CHHHHHHHHHHHHTTCBCCS
T ss_pred HHHhhhcccCCCEEEEEEcCC--Cc---cHHHHHHHHHHHHCCCEEec
Confidence 55554421122222 333322 11 12334677778888887653
No 338
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=23.69 E-value=16 Score=22.07 Aligned_cols=17 Identities=41% Similarity=1.333 Sum_probs=14.1
Q ss_pred CCCCC-CcccCCCCCccc
Q 023870 196 DCEVG-STRKACKNCICG 212 (276)
Q Consensus 196 ~C~~~-~~~kack~ctcG 212 (276)
.|.+| .+++-|..|||.
T Consensus 3 ~C~pG~~~~~dCNtC~C~ 20 (36)
T 2xtt_A 3 ECEPGQTKKQDCNTCRCG 20 (36)
T ss_dssp CSCTTCEEEETTEEEEEC
T ss_pred cCCCCCEEECCCCccCCC
Confidence 57777 678889999996
No 339
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=23.34 E-value=39 Score=19.82 Aligned_cols=18 Identities=28% Similarity=0.833 Sum_probs=14.5
Q ss_pred CCCCCCCCC---CCccccCCC
Q 023870 234 QSACGSCGL---GDAFRCGTC 251 (276)
Q Consensus 234 ~ssCg~C~l---GDAFRC~~C 251 (276)
.=.|..|++ .+|++|.-|
T Consensus 7 ~W~C~~C~~~N~~~~~kC~aC 27 (33)
T 3gj3_B 7 TWDCDTCLVQNKPEAVKCVAC 27 (33)
T ss_dssp CEECTTTCCEECTTCSBCTTT
T ss_pred ceeCCcccCCCccccCEEccc
Confidence 346888987 789999988
No 340
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=23.19 E-value=55 Score=25.95 Aligned_cols=32 Identities=22% Similarity=0.497 Sum_probs=24.5
Q ss_pred CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEe
Q 023870 58 FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYK 95 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~ 95 (276)
..+|+|+.+.. ...+.+..+.|+|+|++++.-
T Consensus 106 ~~~D~vi~~~g------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 106 YGVDVVLNSLA------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CCEEEEEECCC------THHHHHHHHTEEEEEEEEECS
T ss_pred CCCeEEEECCc------hHHHHHHHHHhccCCEEEEEc
Confidence 36999986542 256888999999999998654
No 341
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=22.32 E-value=1.5e+02 Score=23.18 Aligned_cols=111 Identities=6% Similarity=-0.081 Sum_probs=52.5
Q ss_pred CcEEEEccCCCCcHHHHHHHHHHHHHHhhhhCCCCeEEEeccCCCCC-CCCCceeEEEeccccccCCh-HHHHHHHHHhc
Q 023870 8 SAVLALSEDKILPVSAVLNAIRDLGDEAVEQCDPQIITQASSLSQLP-VESFSIDTVLSISSSHELPG-DQLLEEISRVL 85 (276)
Q Consensus 8 ~~vL~v~~~~~~~~~~v~~~m~~~A~~~~~~~~~~v~~~~~d~~~lp-~~~~sfD~V~s~~~l~~~~~-~~~l~ei~rvL 85 (276)
++++++......+.+.|.+.|.+..... .+... ++.... ..-..||+|+..+..++... +..+..+.+.|
T Consensus 1 Mki~IvY~S~tGnT~~iA~~Ia~~l~~~------~v~i~--~~~~~~~~~l~~~d~ii~g~pt~~~G~~p~~~~~f~~~l 72 (175)
T 1ag9_A 1 AITGIFFGSDTGNTENIAKMIQKQLGKD------VADVH--DIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTL 72 (175)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHCTT------TEEEE--EGGGCCHHHHHTCSEEEEECCEETTTEECHHHHHHHHHH
T ss_pred CEEEEEEECCCchHHHHHHHHHHHhccC------ceEEE--EcccCChhHhhhCCEEEEEEeecCCCcChHHHHHHHhhh
Confidence 4677887766666666666665544321 23322 222211 11236899887665543222 23233333333
Q ss_pred c---CCcE-EE-EEecCCC-CchhHHHHHHHHHHHHHHCCCcchhhh
Q 023870 86 K---PGGT-IL-IYKKLTS-DKGDVDKAISALEGKLLLAGFLDAQRI 126 (276)
Q Consensus 86 K---PgG~-l~-i~~~~~~-~~~~~~~~~~~l~~~l~laGF~~v~~~ 126 (276)
+ -.|+ +. +...... ....+..+...+...|...|+..+..+
T Consensus 73 ~~~~l~gk~vavfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v~~~ 119 (175)
T 1ag9_A 73 EEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHW 119 (175)
T ss_dssp TTCCCTTCEEEEEEECCTTTTTTSTTHHHHHHHHHHTTTTCEECCCE
T ss_pred hhcccCCCEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 2 2233 32 2222111 111123444567777777888766543
No 342
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=22.30 E-value=37 Score=24.43 Aligned_cols=11 Identities=36% Similarity=0.863 Sum_probs=7.9
Q ss_pred CCCCCCCCCCC
Q 023870 234 QSACGSCGLGD 244 (276)
Q Consensus 234 ~ssCg~C~lGD 244 (276)
.+|||+|.-|+
T Consensus 58 sgsC~sC~~~~ 68 (87)
T 2k02_A 58 SGSCKSCPEGK 68 (87)
T ss_dssp SSSSSSCSSCC
T ss_pred CCCCCCCCCcc
Confidence 46788887774
No 343
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=21.96 E-value=1.2e+02 Score=26.67 Aligned_cols=60 Identities=8% Similarity=0.063 Sum_probs=44.2
Q ss_pred CCCCCcEEEEccCCCCcHHHHH------------HHHHHHHHHhhhhCCCCeEEEeccCCCCC-----CCCCceeEEEec
Q 023870 4 GKMQSAVLALSEDKILPVSAVL------------NAIRDLGDEAVEQCDPQIITQASSLSQLP-----VESFSIDTVLSI 66 (276)
Q Consensus 4 ~~~g~~vL~v~~~~~~~~~~v~------------~~m~~~A~~~~~~~~~~v~~~~~d~~~lp-----~~~~sfD~V~s~ 66 (276)
+++|..+++.|-|.+..+..+. +.+++.|++ ... .++.++++++.+++ +...+||.|+.-
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 4678888999999987766555 667777776 533 46899999998874 233679999973
No 344
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=21.41 E-value=1.1e+02 Score=21.06 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=22.3
Q ss_pred CCCCCCCCCC------CCccccCCCCCCCCCCCCCCCeEE
Q 023870 233 PQSACGSCGL------GDAFRCGTCPYKGLPPFKLGEKVS 266 (276)
Q Consensus 233 ~~ssCg~C~l------GDAFRC~~CPy~G~PaFkpGe~v~ 266 (276)
..--|++|.+ +|+-||--|=|+=|.--.|-.-|+
T Consensus 27 v~Y~C~~CG~~~e~~~~d~irCp~CG~RILyK~R~~r~v~ 66 (70)
T 1twf_L 27 LKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRLVQ 66 (70)
T ss_dssp CCEECSSSCCEECCCTTSTTCCSSSCCCCCBCCCCSSCEE
T ss_pred EEEECCCCCCcceeCCCCCccCCCCCceEeEecCCCccEE
Confidence 3456888865 799999999995554433433343
No 345
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=21.39 E-value=44 Score=20.95 Aligned_cols=20 Identities=25% Similarity=0.715 Sum_probs=14.1
Q ss_pred CCCCCCCCCCCCccccCCCC
Q 023870 233 PQSACGSCGLGDAFRCGTCP 252 (276)
Q Consensus 233 ~~ssCg~C~lGDAFRC~~CP 252 (276)
....|.+|..---+||++|-
T Consensus 8 ~~~~C~~C~~~~~~~C~~C~ 27 (52)
T 2jw6_A 8 KEQSCVNCGREAMSECTGCH 27 (52)
T ss_dssp ---CCSSSSSSCSEECTTTC
T ss_pred cCCcCCCCCCCCcCcCCCCC
Confidence 35678888887788999884
No 346
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=21.27 E-value=3.4e+02 Score=22.17 Aligned_cols=61 Identities=13% Similarity=-0.028 Sum_probs=29.4
Q ss_pred ceeEEEeccccccCCh----HHHHHHHHHh-----c--cCCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcchh
Q 023870 59 SIDTVLSISSSHELPG----DQLLEEISRV-----L--KPGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLDAQ 124 (276)
Q Consensus 59 sfD~V~s~~~l~~~~~----~~~l~ei~rv-----L--KPgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~v~ 124 (276)
..|+|+..+..++..- ..++..+.+. | |+.+ ++.+.+..... .+...+...+...|+..+.
T Consensus 79 ~AD~iI~~sP~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~--~i~t~g~~g~~---~~~~~l~~~l~~~G~~~v~ 150 (242)
T 1sqs_A 79 ESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVV--TLDVAESNGSD---NVSEYLRDIFSYMGGQILH 150 (242)
T ss_dssp HCSEEEEEEEECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEE--EEEEESSCCSC---CHHHHHHHHHHHTTCEEEE
T ss_pred HCCEEEEEccccccCCCHHHHHHHHHHHHhccccccCCCEEE--EEEeCCCCchh---hHHHHHHHHHHHCCCeeee
Confidence 4788887776655432 3444444321 2 2222 22222211111 1223566677778887654
No 347
>1ic9_A TH10AOX; three stranded antiparallel beta-sheet mini-protein motif de novo protein design; HET: DPR DAL; NMR {Synthetic} SCOP: k.26.1.1 PDB: 1ico_A* 1icl_A*
Probab=21.01 E-value=47 Score=18.36 Aligned_cols=13 Identities=38% Similarity=0.731 Sum_probs=9.6
Q ss_pred ccccCCCCCCCCCC
Q 023870 245 AFRCGTCPYKGLPP 258 (276)
Q Consensus 245 AFRC~~CPy~G~Pa 258 (276)
.||=.|||-| .||
T Consensus 11 tfrgpgcptl-kpa 23 (29)
T 1ic9_A 11 TFRGPGCPTL-KPA 23 (29)
T ss_dssp EEECSCCCCC-CTT
T ss_pred eecCCCCCcc-cce
Confidence 4888999877 444
No 348
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=20.99 E-value=2.8e+02 Score=26.20 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=42.4
Q ss_pred EEeccCCCCCC----CCCceeEEEeccccc--c-----------CC--h--HHHHHHHHHhcc-------CCcEEEEEec
Q 023870 45 TQASSLSQLPV----ESFSIDTVLSISSSH--E-----------LP--G--DQLLEEISRVLK-------PGGTILIYKK 96 (276)
Q Consensus 45 ~~~~d~~~lp~----~~~sfD~V~s~~~l~--~-----------~~--~--~~~l~ei~rvLK-------PgG~l~i~~~ 96 (276)
...+|....|+ +...||+|+++-.+. + .+ + -.++..+.+.|| |||++.+..+
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 44555544333 234799999975431 1 11 1 347888899987 7999988876
Q ss_pred CCCCchhHHHHHHHHHHHHHHCCCc
Q 023870 97 LTSDKGDVDKAISALEGKLLLAGFL 121 (276)
Q Consensus 97 ~~~~~~~~~~~~~~l~~~l~laGF~ 121 (276)
.. .+.. ......+++.|...+.+
T Consensus 364 ~g-~Lf~-~~~~~~iRk~Lle~~~l 386 (530)
T 3ufb_A 364 NG-TLFS-DGISARIKEELLKNFNL 386 (530)
T ss_dssp HH-HHHC-CTHHHHHHHHHHHHSEE
T ss_pred ch-hhhc-cchHHHHHHHHhhcCEE
Confidence 41 1100 00112466666666554
No 349
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=20.81 E-value=71 Score=28.96 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=29.7
Q ss_pred CCCceeEEEeccccccCC--hHHHHHHHHHhccCCcEEEEEec
Q 023870 56 ESFSIDTVLSISSSHELP--GDQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 56 ~~~sfD~V~s~~~l~~~~--~~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
+...||+|+....-+--. .+..|.++.+.|+|||.+++.-.
T Consensus 98 ~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 98 AAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp CTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 456899998765432111 26788999999999999987753
No 350
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=20.54 E-value=1.4e+02 Score=24.18 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=23.7
Q ss_pred CceeEEEeccccccCChHHHHHHHHHhccCCcEEEEEec
Q 023870 58 FSIDTVLSISSSHELPGDQLLEEISRVLKPGGTILIYKK 96 (276)
Q Consensus 58 ~sfD~V~s~~~l~~~~~~~~l~ei~rvLKPgG~l~i~~~ 96 (276)
...|++++.. +..+.....-|||||.+++.+.
T Consensus 69 g~~D~lv~~d-------~~~~~~~~~~l~~gg~vi~ns~ 100 (194)
T 3g2e_A 69 GEVDFMLSTA-------DKGYKGFRGGVKEGGIIVVEPN 100 (194)
T ss_dssp TCEEEEEECC-------HHHHHHHGGGEEEEEEEEECTT
T ss_pred CCCCEEEEcC-------HHHHHHHHhccCCCeEEEEeCC
Confidence 4789999864 2345567888999999987654
No 351
>2eqe_A Tumor necrosis factor, alpha-induced protein 3; ZF-A20 domain, putative DNA-binding protein A20, zinc finger protein A20, structural genomics; NMR {Homo sapiens}
Probab=20.52 E-value=38 Score=21.49 Aligned_cols=12 Identities=42% Similarity=0.775 Sum_probs=9.8
Q ss_pred ccCCCCCCCCCC
Q 023870 247 RCGTCPYKGLPP 258 (276)
Q Consensus 247 RC~~CPy~G~Pa 258 (276)
|=+||||-|-|-
T Consensus 19 Rk~GC~fFGTpe 30 (48)
T 2eqe_A 19 RKAGCVYFGTPE 30 (48)
T ss_dssp SSTTCCSBCCTT
T ss_pred hhcCCCcccCcc
Confidence 458999999884
No 352
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.28 E-value=65 Score=21.15 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=13.2
Q ss_pred CCCCCCCCeEEecCccc
Q 023870 256 LPPFKLGEKVSLSSNFL 272 (276)
Q Consensus 256 ~PaFkpGe~v~l~~~~l 272 (276)
-..|+|||.|++.+--+
T Consensus 5 ~~~f~~GD~V~V~~Gpf 21 (59)
T 2e6z_A 5 SSGFQPGDNVEVCEGEL 21 (59)
T ss_dssp CSSCCTTSEEEECSSTT
T ss_pred cccCCCCCEEEEeecCC
Confidence 45699999999876544
No 353
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=20.16 E-value=1.4e+02 Score=21.97 Aligned_cols=50 Identities=24% Similarity=0.245 Sum_probs=30.8
Q ss_pred EEEeccccccCCh--HHHHHHHHHhcc-CCcEEEEEecCCCCchhHHHHHHHHHHHHHHCCCcc
Q 023870 62 TVLSISSSHELPG--DQLLEEISRVLK-PGGTILIYKKLTSDKGDVDKAISALEGKLLLAGFLD 122 (276)
Q Consensus 62 ~V~s~~~l~~~~~--~~~l~ei~rvLK-PgG~l~i~~~~~~~~~~~~~~~~~l~~~l~laGF~~ 122 (276)
+|+-.....++.. -.+|.++++.++ -|+.+++....+ .+.+.|..+||..
T Consensus 52 vvlDls~v~~iDssgl~~L~~~~~~~~~~g~~l~l~~~~~-----------~v~~~l~~~gl~~ 104 (130)
T 4dgh_A 52 LILRLKWVPFMDITGIQTLEEMIQSFHKRGIKVLISGANS-----------RVSQKLVKAGIVK 104 (130)
T ss_dssp EEEECTTCCCCCHHHHHHHHHHHHHHHTTTCEEEEECCCH-----------HHHHHHHHTTHHH
T ss_pred EEEECCCCCcccHHHHHHHHHHHHHHHHCCCEEEEEcCCH-----------HHHHHHHHcCChh
Confidence 3444444455554 556677766665 478888876542 4455677888764
Done!