BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023871
MSLAPSSYASLYSPPPLPRTNQNPFLFSQNSHVWFKKNCFLSASGCSCNTLLVKPSVFVA
KASETEAQASPEAESGSEEQEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK
TGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGKMEQTGELSE
KEIIRAERNSGVISNRVREIQMQNYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFES
VLGSKPTPEESSVASYNVACCYSKLNQVPLLLALIE

High Scoring Gene Products

Symbol, full name Information P value
ZKT
protein containing PDZ domain, a K-box domain, and a TPR region
protein from Arabidopsis thaliana 3.5e-75
ENH1
enhancer of sos3-1
protein from Arabidopsis thaliana 0.00018

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023871
        (276 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2193844 - symbol:ZKT "protein containing PDZ d...   758  3.5e-75   1
TAIR|locus:2167150 - symbol:ENH1 "enhancer of sos3-1" spe...   113  0.00018   1


>TAIR|locus:2193844 [details] [associations]
            symbol:ZKT "protein containing PDZ domain, a K-box
            domain, and a TPR region" species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] [GO:0009611 "response to
            wounding" evidence=IEP] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
            evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
            [GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
            InterPro:IPR001478 InterPro:IPR011990 InterPro:IPR013026
            InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50106 PROSITE:PS50293
            EMBL:CP002684 GO:GO:0009570 GO:GO:0009611 GO:GO:0009941
            Gene3D:1.25.40.10 SUPFAM:SSF50156 GO:GO:0009535 EMBL:AY039926
            EMBL:AY079359 EMBL:AY986818 EMBL:AB190499 IPI:IPI00548632
            RefSeq:NP_564691.1 UniGene:At.19231 ProteinModelPortal:Q94BS2
            SMR:Q94BS2 STRING:Q94BS2 PRIDE:Q94BS2 ProMEX:Q94BS2
            EnsemblPlants:AT1G55480.1 GeneID:841995 KEGG:ath:AT1G55480
            TAIR:At1g55480 InParanoid:Q94BS2 OMA:DFKRIRT PhylomeDB:Q94BS2
            ProtClustDB:CLSN2688838 ArrayExpress:Q94BS2 Genevestigator:Q94BS2
            Uniprot:Q94BS2
        Length = 335

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 159/259 (61%), Positives = 182/259 (70%)

Query:    19 RTNQNPFLFSQNSHVWFKKNCFLSASGCS-CNTLLVKPSVFVAKASETXXXXXXXXXXXX 77
             +T QNP L +Q+S +   K+ FLS++  S CNT + K      KASET            
Sbjct:    22 QTKQNPSLITQSSFI-SAKSLFLSSNSASLCNTHVAKRRNLALKASETESSAKAEAGGDG 80

Query:    78 XXXXXXXXXXXXXXXXXXGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVF 137
                               GLKF KGRDGGTYIDAI PGGSADKTG F VGD+V+ATSAVF
Sbjct:    81 EEEEKYETYEIEVEQPY-GLKFRKGRDGGTYIDAILPGGSADKTGKFTVGDRVIATSAVF 139

Query:   138 GTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGKMEQTGELSEKEIIRAERNSGVISNRV 197
             GTEIWPAAEYGRTMYTIRQR+GPLLM+M+KR GK E TGEL+EKEIIRAERN+G IS+R+
Sbjct:   140 GTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDTGELTEKEIIRAERNAGYISSRL 199

Query:   198 REIQMQNYMXXXXXXXXXXXDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYN 257
             REIQMQNY+           DLREGLQ  + GKYE A E+FESVLGSKPTPEE+SVASYN
Sbjct:   200 REIQMQNYLKKKEQKAQREKDLREGLQFSKNGKYEEALERFESVLGSKPTPEEASVASYN 259

Query:   258 VACCYSKLNQVPLLLALIE 276
             VACCYSKLNQV   L+ +E
Sbjct:   260 VACCYSKLNQVQAGLSALE 278


>TAIR|locus:2167150 [details] [associations]
            symbol:ENH1 "enhancer of sos3-1" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0046872 "metal ion binding" evidence=ISS] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009535 "chloroplast
            thylakoid membrane" evidence=IDA] [GO:0009534 "chloroplast
            thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009637 "response to blue light" evidence=RCA] [GO:0009657
            "plastid organization" evidence=RCA] [GO:0010114 "response to red
            light" evidence=RCA] [GO:0010207 "photosystem II assembly"
            evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
            InterPro:IPR001478 InterPro:IPR024934 PROSITE:PS50106
            PROSITE:PS50903 SMART:SM00228 InterPro:IPR004039 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005506 GO:GO:0009941
            SUPFAM:SSF50156 GO:GO:0009535 EMBL:AB005238 Gene3D:2.20.28.10
            EMBL:AY035119 EMBL:BT000984 IPI:IPI00531946 RefSeq:NP_568342.1
            UniGene:At.22701 HSSP:P24297 ProteinModelPortal:Q9FFJ2 SMR:Q9FFJ2
            IntAct:Q9FFJ2 STRING:Q9FFJ2 PRIDE:Q9FFJ2 ProMEX:Q9FFJ2
            EnsemblPlants:AT5G17170.1 GeneID:831581 KEGG:ath:AT5G17170
            TAIR:At5g17170 HOGENOM:HOG000012648 InParanoid:Q9FFJ2 OMA:THICLDC
            PhylomeDB:Q9FFJ2 ProtClustDB:CLSN2689731 ArrayExpress:Q9FFJ2
            Genevestigator:Q9FFJ2 Uniprot:Q9FFJ2
        Length = 271

 Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query:    96 GLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155
             GL   + + GG  I  +  GG+A K G+ + GD+V+ TS+ FG E+WPA + G T   I+
Sbjct:    95 GLTLGQKQGGGVVITGVDGGGNAAKAGL-KSGDQVVYTSSFFGDELWPADKLGFTKTAIQ 153

Query:   156 QR 157
              +
Sbjct:   154 AK 155


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      276       218   0.00091  112 3  11 22  0.39    33
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  161 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.76u 0.17s 16.93t   Elapsed:  00:00:00
  Total cpu time:  16.76u 0.17s 16.93t   Elapsed:  00:00:00
  Start:  Sat May 11 00:48:44 2013   End:  Sat May 11 00:48:44 2013

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