Your job contains 1 sequence.
>023874
MNFPLFYLFIYSKVCPRATFLLFCPSVLYSKESHWLVISFVLLGSRTGTLVTAYLLLVLG
FIGLTWASVEAGNLRAIMLLTCAVICGYIYQCPPFRLSYQGLGEPLCFAAFGPFATTAFY
LLLGSTRENLCLSITATVLSASLLVGLTTSLILFCSHFHQVEGDRNVGKMSPLVRLGTER
GSVVVKWAVMILYSLLFAIGLSRALPLSCIFLCAMTSPIGKLVVSYVEENHKDKGKIFMA
KYYCVRFHALFGAALVAGLITARILVTKHIPKLVFQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023874
(276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036484 - symbol:ABC4 "ABERRANT CHLOROPLAST DE... 742 1.7e-73 1
TIGR_CMR|BA_3186 - symbol:BA_3186 "1,4-dihydroxy-2-naphth... 114 0.00030 1
TIGR_CMR|DET_0401 - symbol:DET_0401 "1,4-dihydroxy-2-naph... 113 0.00039 1
>TAIR|locus:2036484 [details] [associations]
symbol:ABC4 "ABERRANT CHLOROPLAST DEVELOPMENT 4"
species:3702 "Arabidopsis thaliana" [GO:0004659 "prenyltransferase
activity" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009772 "photosynthetic
electron transport in photosystem II" evidence=IMP] [GO:0010236
"plastoquinone biosynthetic process" evidence=IMP] [GO:0042372
"phylloquinone biosynthetic process" evidence=IMP] [GO:0046428
"1,4-dihydroxy-2-naphthoate octaprenyltransferase activity"
evidence=ISS] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0016556 "mRNA modification" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] InterPro:IPR000537
Pfam:PF01040 GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 GO:GO:0031969 EMBL:AC002292 GO:GO:0009772
GO:GO:0042372 EMBL:BT012196 EMBL:AK227267 IPI:IPI00528972
IPI:IPI00891712 RefSeq:NP_001117518.1 RefSeq:NP_176259.2
UniGene:At.36625 IntAct:Q0WUA3 STRING:Q0WUA3 PRIDE:Q0WUA3
EnsemblPlants:AT1G60600.2 GeneID:842354 KEGG:ath:AT1G60600
TAIR:At1g60600 eggNOG:COG1575 HOGENOM:HOG000232475
InParanoid:Q0WUA3 KO:K02548 OMA:LIWRAIK PhylomeDB:Q0WUA3
ProtClustDB:PLN02922 Genevestigator:Q0WUA3 GO:GO:0046428
GO:GO:0010236 InterPro:IPR011937 TIGRFAMs:TIGR02235 Uniprot:Q0WUA3
Length = 382
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 139/222 (62%), Positives = 166/222 (74%)
Query: 42 LLGSRTGTLVTAYLLLVLGFIGLTWASVEAGNLRAIMLLTCAVICGYIYQCPPFRLSYQG 101
L+GSRTGTL A L LG GL W S+ A N+RAI+LL A++CGY+YQCPPFRLSYQG
Sbjct: 161 LVGSRTGTLAAAITSLALGVSGLVWTSLNASNIRAILLLASAILCGYVYQCPPFRLSYQG 220
Query: 102 LGEPLCXXXXXXXXXXXXYLLLGSTRENLCLSITATVLSASLLVGLTTSLILFCSHFHQV 161
LGEPLC YLLLGS+ E L ++ VLS+S+LVG TTSLILFCSHFHQV
Sbjct: 221 LGEPLCFAAFGPFATTAFYLLLGSSSEMRHLPLSGRVLSSSVLVGFTTSLILFCSHFHQV 280
Query: 162 EGDRNVGKMSPLVRLGTERGSVVVKWAVMILYSLLFAIGLSRALPLSCIFLCAMTSPIGK 221
+GD VGK SPLVRLGTE+G+ VV+W + +LYS+L +GL+R LPL C +C +T P+G
Sbjct: 281 DGDLAVGKYSPLVRLGTEKGAFVVRWTIRLLYSMLLVLGLTRILPLPCTLMCFLTLPVGN 340
Query: 222 LVVSYVEENHKDKGKIFMAKYYCVRFHALFGAALVAGLITAR 263
LV SYVE++HKD GKIFMAKYYCVR HAL GAAL GL+ AR
Sbjct: 341 LVSSYVEKHHKDNGKIFMAKYYCVRLHALLGAALSLGLVIAR 382
>TIGR_CMR|BA_3186 [details] [associations]
symbol:BA_3186 "1,4-dihydroxy-2-naphthoate
octaprenyltransferase, putative" species:198094 "Bacillus anthracis
str. Ames" [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=ISS]
InterPro:IPR000537 InterPro:IPR004657 Pfam:PF01040 GO:GO:0016021
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0004659
GO:GO:0009234 KO:K02548 InterPro:IPR026046 PIRSF:PIRSF005355
TIGRFAMs:TIGR00751 HOGENOM:HOG000028298 RefSeq:NP_845496.1
RefSeq:YP_019827.1 RefSeq:YP_029219.1 IntAct:Q81NK6 DNASU:1086881
EnsemblBacteria:EBBACT00000009570 EnsemblBacteria:EBBACT00000018119
EnsemblBacteria:EBBACT00000019223 GeneID:1086881 GeneID:2818558
GeneID:2851326 KEGG:ban:BA_3186 KEGG:bar:GBAA_3186 KEGG:bat:BAS2962
OMA:VAFFIAY ProtClustDB:PRK13387
BioCyc:BANT260799:GJAJ-3024-MONOMER
BioCyc:BANT261594:GJ7F-3127-MONOMER Uniprot:Q81NK6
Length = 303
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 51/220 (23%), Positives = 91/220 (41%)
Query: 44 GSRTGTLVTAYLLL--VLGFIGLTWASVEAGNLRAIMLLTCAVICGYIYQCPPFRLSYQG 101
G + ++T LLL V IG+ + L I L+ AV GY+Y P ++Y
Sbjct: 90 GLKPKNVLTVALLLYVVAAIIGVYICMNSSWWLVVIGLIGMAV--GYLYTGGPLPIAYTP 147
Query: 102 LGEPLCXXXXXXXXXXXXYLLLGSTRENLCLSITATVLSASLLVGLTTSLILFCSHFHQV 161
GE + + + +T IT + S+ +G+ I ++ +
Sbjct: 148 FGELVSGLLMGTCFVLIAFFIQTNT-------ITTESVLISIPIGILVGAINMSNNIRDI 200
Query: 162 EGDRNVGKMSPLVRLGTERGSVVVKWAVMILYSLLFAI-GLSRALPLSCIFLCAMTSPIG 220
E D G+ + ++ LG E+ V + A I Y + I + P + + + PI
Sbjct: 201 EEDIKGGRKTLVILLGREKAVVTLAIAFFIAYLWIAVIVWMGYISPWALVMFLGLRKPIS 260
Query: 221 KLVVSYVEENHKDKGKIFMAKYYCVRFHALFGAALVAGLI 260
+ S+ ++ KD G + +A + +FG L AGL+
Sbjct: 261 A-IQSF-QKGAKDPGYMRIAMKSTAMTNTIFGFLLSAGLL 298
>TIGR_CMR|DET_0401 [details] [associations]
symbol:DET_0401 "1,4-dihydroxy-2-naphthoate
octaprenyltransferase, putative" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=ISS]
InterPro:IPR000537 Pfam:PF01040 GO:GO:0016021 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0004659 eggNOG:COG1575 KO:K02548
InterPro:IPR026046 PIRSF:PIRSF005355 RefSeq:YP_181146.1
STRING:Q3Z9F3 GeneID:3230256 KEGG:det:DET0401 PATRIC:21607871
HOGENOM:HOG000275432 OMA:HMILLYY ProtClustDB:CLSK837490
BioCyc:DETH243164:GJNF-401-MONOMER Uniprot:Q3Z9F3
Length = 306
Score = 113 (44.8 bits), Expect = 0.00039, P = 0.00039
Identities = 44/215 (20%), Positives = 88/215 (40%)
Query: 49 TLVTAYLLLVLGFIGLTWASVEAG-NLRAIMLLTCAVICGYIYQCPPFRLSYQGLGEPLC 107
+L+ + L + + +++ G + I ++ A+ +Y P RL+Y GLGE +
Sbjct: 103 SLLVIFSLYFFALLCAIYMALDMGWGVMWIAVIGAAI--SILYSAKPMRLAYHGLGELMM 160
Query: 108 XXXXXXXXXXXXYLLLGSTRENLCLSITATVLSASLLVGLTTSLILFCSHFHQVEGDRNV 167
Y + + VL ++ GL ++ + + DR
Sbjct: 161 LIGYGPVLTAWGYFVHTGM-------VNRDVLLIGVIPGLCMWAMILINEIPDYQEDRAA 213
Query: 168 GKMSPLVRLGTERGSVVVKWAVMILYSLLFAIGLSRALP-LSCIFLCAMTSPIGKLVVSY 226
GK + RLG + + ++ LY+ + A+ + +P LS I L + P+ + V
Sbjct: 214 GKRNLTYRLGPKNAKNLFSISLAGLYTYILALVFTGVMPPLSAISLGGI--PLAVMAVRI 271
Query: 227 VEENHKDKGKIFMAKYYCVRFHALFGAALVAGLIT 261
+ D K+ MA V +++ A + G++T
Sbjct: 272 AHRYYNDPIKVAMANKLMVIIYSVTTATVAIGMLT 306
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.331 0.143 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 276 264 0.00092 114 3 11 21 0.48 32
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 610 (65 KB)
Total size of DFA: 191 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.35u 0.11s 21.46t Elapsed: 00:00:01
Total cpu time: 21.35u 0.11s 21.46t Elapsed: 00:00:01
Start: Sat May 11 00:57:42 2013 End: Sat May 11 00:57:43 2013