BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023875
MSQLFYTLPKRLTVSPSPPLLHFNYRSSRTRLVCSKMPTESSPSPLTHSITIPSQLSQPV
HVVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGF
LKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM
IDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVR
VVPYRELWRTTPDAKVLTAIALYEMASKEELLPSRT

High Scoring Gene Products

Symbol, full name Information P value
NUDX14
nudix hydrolase homolog 14
protein from Arabidopsis thaliana 2.9e-55
DDB_G0271376 gene from Dictyostelium discoideum 1.7e-34
DDB_G0282603
NUDIX hydrolase family protein
gene from Dictyostelium discoideum 0.00041

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023875
        (276 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2118061 - symbol:NUDX14 "nudix hydrolase homol...   570  2.9e-55   1
DICTYBASE|DDB_G0271376 - symbol:DDB_G0271376 species:4468...   279  1.7e-34   2
DICTYBASE|DDB_G0282603 - symbol:DDB_G0282603 "NUDIX hydro...   109  0.00041   1


>TAIR|locus:2118061 [details] [associations]
            symbol:NUDX14 "nudix hydrolase homolog 14" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA;ISS] [GO:0019144
            "ADP-sugar diphosphatase activity" evidence=IDA] [GO:0080041
            "ADP-ribose pyrophosphohydrolase activity" evidence=IDA]
            [GO:0080042 "ADP-glucose pyrophosphohydrolase activity"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            InterPro:IPR000086 InterPro:IPR015797 Pfam:PF00293 PROSITE:PS00893
            PROSITE:PS51462 GO:GO:0009570 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0046872 Gene3D:3.90.79.10
            SUPFAM:SSF55811 EMBL:AL049638 EMBL:AL161533 EMBL:AJ748742
            EMBL:AY052271 EMBL:BT001146 IPI:IPI00540616 PIR:T06605
            RefSeq:NP_567384.1 UniGene:At.48848 UniGene:At.68491
            ProteinModelPortal:Q9SZ63 STRING:Q9SZ63 PaxDb:Q9SZ63 PRIDE:Q9SZ63
            ProMEX:Q9SZ63 EnsemblPlants:AT4G11980.1 GeneID:826805
            KEGG:ath:AT4G11980 TAIR:At4g11980 eggNOG:NOG275218
            HOGENOM:HOG000174303 InParanoid:Q9SZ63 OMA:FLKFKAD PhylomeDB:Q9SZ63
            ProtClustDB:PLN03143 Genevestigator:Q9SZ63 GermOnline:AT4G11980
            GO:GO:0080042 GO:GO:0080041 Uniprot:Q9SZ63
        Length = 309

 Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
 Identities = 107/142 (75%), Positives = 126/142 (88%)

Query:   134 QKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 193
             ++VRVPTG+++LELPAGMLDDDKGDFVGTAVREVEEE GI+LK EDM+DLTAFL PSTG 
Sbjct:   162 EQVRVPTGKIVLELPAGMLDDDKGDFVGTAVREVEEEIGIKLKKEDMVDLTAFLDPSTGY 221

Query:   194 KFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 253
             + FPS GGCDEE+S+FLYRG+V+KE I QLQGKETGLR+HGE IKVR++PYRELWR T D
Sbjct:   222 RIFPSPGGCDEEMSVFLYRGQVEKETIRQLQGKETGLREHGEFIKVRLIPYRELWRKTAD 281

Query:   254 AKVLTAIALYEMASKEELLPSR 275
             AKVL +I LYEMA +E L+ S+
Sbjct:   282 AKVLMSIGLYEMAQREGLVSSQ 303

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 100/187 (53%), Positives = 122/187 (65%)

Query:     5 FYTLPKRLTVSPS---PPLLHFNYRSSRTRLVCSKMPTESSPSPLTHSITIPSQLSQPVH 61
             F  LP RL   PS   P  LH ++  ++  L C KM   SS S LT SIT+PSQ ++PV 
Sbjct:     4 FTLLPSRLLAFPSRALPRRLHHHH--AKLILRC-KM--SSSSSSLTQSITLPSQPNEPVL 58

Query:    62 VVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFL 121
             V A  G+S SDFR A++S+LF+ WL+NL+SE+GILA+G M LKQVLIQGVDMFGKRIGFL
Sbjct:    59 VSATAGISSSDFRDAIDSSLFRNWLRNLESESGILADGSMTLKQVLIQGVDMFGKRIGFL 118

Query:   122 KFKADIFCKETGQKVRVPTGRVILELPAG----MLDDDKGDFVGTAVREVEEETG-IQLK 176
             KFKADIF KETGQKV  P G V    PA     +L+ D G+       +V   TG I L+
Sbjct:   119 KFKADIFDKETGQKV--P-GIVFARGPAVAVLILLESD-GETYAVLTEQVRVPTGKIVLE 174

Query:   177 LE-DMID 182
             L   M+D
Sbjct:   175 LPAGMLD 181


>DICTYBASE|DDB_G0271376 [details] [associations]
            symbol:DDB_G0271376 species:44689 "Dictyostelium
            discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000086 InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
            dictyBase:DDB_G0271376 Gene3D:3.90.79.10 SUPFAM:SSF55811
            EMBL:AAFI02000006 GO:GO:0016787 eggNOG:NOG275218 OMA:FLKFKAD
            RefSeq:XP_645669.1 ProteinModelPortal:Q55BE3
            EnsemblProtists:DDB0216797 GeneID:8617861 KEGG:ddi:DDB_G0271376
            InParanoid:Q55BE3 ProtClustDB:CLSZ2431338 Uniprot:Q55BE3
        Length = 253

 Score = 279 (103.3 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 64/151 (42%), Positives = 89/151 (58%)

Query:   130 KETGQK-------VRVPTGRV-ILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMI 181
             KETG++        RVP       E+PAGMLD   G FVG A +E++EETG+++  + +I
Sbjct:   104 KETGKEYSVLTVQTRVPVASFQYSEIPAGMLDGS-GHFVGVAAKELKEETGLEVSEDKLI 162

Query:   182 DLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRV 241
             DLT   Y +     +PS GGCDE I LFL+R  +D+  I +LQ K TG  D  E I + +
Sbjct:   163 DLTKLAYGTEVDGVYPSPGGCDEFIRLFLFRETLDQSKIDELQHKLTGCLDENESITLNI 222

Query:   242 VPYRELWRTTPDAKVLTAIALYEMASKEELL 272
             VP  +LW+ + D K L+A+ LYE   K+  L
Sbjct:   223 VPLEDLWKKSHDGKTLSALYLYEKLLKDNKL 253

 Score = 111 (44.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query:    69 SESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIF 128
             +E      + +  F +W+K ++ E  +  N       + +Q VDMFGK +GFLKFKAD+ 
Sbjct:    23 NEISLETVMSAPNFNKWIKKMELEKELKVNS------ISVQSVDMFGKNVGFLKFKADVV 76

Query:   129 CKETGQKV 136
               + G+ V
Sbjct:    77 TVKEGRVV 84


>DICTYBASE|DDB_G0282603 [details] [associations]
            symbol:DDB_G0282603 "NUDIX hydrolase family protein"
            species:44689 "Dictyostelium discoideum" [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR000086 InterPro:IPR015797
            Pfam:PF00293 PROSITE:PS51462 dictyBase:DDB_G0282603
            EMBL:AAFI02000047 eggNOG:COG0494 Gene3D:3.90.79.10 SUPFAM:SSF55811
            GO:GO:0016787 KO:K01515 OMA:HLTVDAR RefSeq:XP_640150.1
            ProteinModelPortal:Q54S89 STRING:Q54S89 EnsemblProtists:DDB0204862
            GeneID:8623688 KEGG:ddi:DDB_G0282603 InParanoid:Q54S89
            Uniprot:Q54S89
        Length = 199

 Score = 109 (43.4 bits), Expect = 0.00041, P = 0.00041
 Identities = 22/53 (41%), Positives = 38/53 (71%)

Query:   137 RVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYP 189
             RVP   +++E PAG++D+D+ +FV +A+RE++EETG +    D + LT+ + P
Sbjct:    73 RVPVDNLVIEFPAGLVDNDE-NFVNSAIRELKEETGYRTT-PDKVLLTSPILP 123


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      276       276   0.00079  115 3  11 22  0.49    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  190 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.27u 0.08s 25.35t   Elapsed:  00:00:02
  Total cpu time:  25.27u 0.08s 25.35t   Elapsed:  00:00:02
  Start:  Sat May 11 00:59:05 2013   End:  Sat May 11 00:59:07 2013

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