Query 023875
Match_columns 276
No_of_seqs 283 out of 2200
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 14:15:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g0s_A Hypothetical 23.7 kDa p 100.0 2.6E-27 8.8E-32 207.0 18.8 172 69-265 12-199 (209)
2 1vhz_A ADP compounds hydrolase 99.9 3.4E-26 1.2E-30 198.4 19.2 170 77-273 14-189 (198)
3 1mk1_A ADPR pyrophosphatase; n 99.9 2.1E-25 7.1E-30 194.1 17.4 171 75-271 8-184 (207)
4 2dsc_A ADP-sugar pyrophosphata 99.9 4.1E-25 1.4E-29 192.9 19.1 159 77-252 21-185 (212)
5 3o6z_A GDP-mannose pyrophospha 99.9 1E-24 3.5E-29 187.7 16.3 160 78-263 9-184 (191)
6 2yvp_A NDX2, MUTT/nudix family 99.9 5.5E-24 1.9E-28 180.2 13.4 163 77-267 8-176 (182)
7 3q91_A Uridine diphosphate glu 99.9 1.3E-23 4.4E-28 185.7 12.4 146 90-255 16-193 (218)
8 2w4e_A MUTT/nudix family prote 99.9 3.9E-22 1.3E-26 163.3 13.9 134 114-270 4-143 (145)
9 1v8y_A ADP-ribose pyrophosphat 99.9 6.4E-22 2.2E-26 165.9 13.9 152 78-268 11-168 (170)
10 3cng_A Nudix hydrolase; struct 99.7 9.2E-16 3.1E-20 131.0 14.0 151 94-273 15-170 (189)
11 1sjy_A MUTT/nudix family prote 99.7 1.9E-15 6.4E-20 123.8 14.6 114 117-252 15-132 (159)
12 3shd_A Phosphatase NUDJ; nudix 99.7 2.8E-15 9.5E-20 122.4 15.3 99 126-248 15-113 (153)
13 3gg6_A Nudix motif 18, nucleos 99.6 4.8E-16 1.7E-20 127.5 10.2 119 118-261 23-141 (156)
14 2b0v_A Nudix hydrolase; struct 99.6 3.3E-15 1.1E-19 121.5 12.7 103 125-250 17-120 (153)
15 3i7u_A AP4A hydrolase; nudix p 99.6 4.1E-15 1.4E-19 120.6 12.5 107 118-252 7-114 (134)
16 2yyh_A MUTT domain, 8-OXO-DGTP 99.6 1.4E-14 4.7E-19 116.6 14.3 108 118-255 12-128 (139)
17 1f3y_A Diadenosine 5',5'''-P1, 99.6 9.8E-15 3.3E-19 119.7 13.6 122 115-253 14-148 (165)
18 1u20_A U8 snoRNA-binding prote 99.6 1.7E-15 5.8E-20 132.3 9.1 148 78-250 12-165 (212)
19 3h95_A Nucleoside diphosphate- 99.6 4.9E-15 1.7E-19 127.4 11.1 119 117-257 28-147 (199)
20 3gwy_A Putative CTP pyrophosph 99.6 2.1E-14 7.1E-19 115.8 14.0 108 118-252 9-118 (140)
21 4dyw_A MUTT/nudix family prote 99.6 8.6E-15 2.9E-19 121.0 11.8 112 118-252 32-143 (157)
22 3son_A Hypothetical nudix hydr 99.6 3.3E-14 1.1E-18 115.7 14.8 119 116-253 6-127 (149)
23 2fkb_A Putative nudix hydrolas 99.6 2.1E-14 7.3E-19 120.5 13.4 120 117-263 39-164 (180)
24 2a6t_A SPAC19A8.12; alpha/beta 99.6 4.1E-15 1.4E-19 135.0 9.2 113 117-254 103-216 (271)
25 2pbt_A AP4A hydrolase; nudix p 99.6 1.9E-14 6.7E-19 114.2 12.0 107 118-252 7-114 (134)
26 1vcd_A NDX1; nudix protein, di 99.6 4.2E-14 1.4E-18 111.3 13.3 108 117-254 4-111 (126)
27 1q27_A Putative nudix hydrolas 99.6 1.5E-14 5.2E-19 120.4 11.3 121 117-261 36-164 (171)
28 3grn_A MUTT related protein; s 99.6 5.6E-14 1.9E-18 114.9 14.4 110 117-251 10-120 (153)
29 1ktg_A Diadenosine tetraphosph 99.6 6.4E-14 2.2E-18 112.0 14.4 91 141-252 28-120 (138)
30 3u53_A BIS(5'-nucleosyl)-tetra 99.6 8.3E-14 2.8E-18 114.6 14.8 94 141-252 34-127 (155)
31 1nqz_A COA pyrophosphatase (MU 99.6 2E-14 6.9E-19 122.5 11.1 113 117-251 36-152 (194)
32 3oga_A Nucleoside triphosphata 99.6 2.2E-14 7.6E-19 118.7 11.0 117 122-252 34-151 (165)
33 3r03_A Nudix hydrolase; struct 99.5 5.2E-14 1.8E-18 113.2 11.8 111 118-252 11-121 (144)
34 2rrk_A ORF135, CTP pyrophospho 99.5 5.8E-14 2E-18 112.3 11.2 102 125-252 18-119 (140)
35 3eds_A MUTT/nudix family prote 99.5 1.4E-14 4.9E-19 119.0 7.4 115 117-252 23-137 (153)
36 1rya_A GDP-mannose mannosyl hy 99.5 1E-13 3.5E-18 113.4 12.3 115 117-251 20-139 (160)
37 3id9_A MUTT/nudix family prote 99.5 6.1E-14 2.1E-18 116.7 11.0 111 118-252 26-137 (171)
38 3hhj_A Mutator MUTT protein; n 99.5 7.6E-14 2.6E-18 114.7 11.2 111 118-252 32-142 (158)
39 3i9x_A MUTT/nudix family prote 99.5 9.6E-14 3.3E-18 117.9 12.0 98 131-250 49-155 (187)
40 2xsq_A U8 snoRNA-decapping enz 99.5 1.4E-14 4.9E-19 127.4 7.0 122 142-275 74-206 (217)
41 1hzt_A Isopentenyl diphosphate 99.5 1.7E-14 5.8E-19 122.8 6.6 112 117-252 34-152 (190)
42 2jvb_A Protein PSU1, mRNA-deca 99.5 3.2E-14 1.1E-18 115.2 7.6 110 117-252 6-116 (146)
43 2o1c_A DATP pyrophosphohydrola 99.5 1.2E-13 4E-18 111.3 10.9 120 117-253 11-135 (150)
44 3f6a_A Hydrolase, nudix family 99.5 1.9E-13 6.5E-18 112.6 12.2 116 117-252 8-135 (159)
45 2azw_A MUTT/nudix family prote 99.5 2E-13 6.7E-18 110.2 12.0 118 117-260 20-140 (148)
46 3q1p_A Phosphohydrolase (MUTT/ 99.5 1.1E-13 3.7E-18 119.9 10.5 90 143-252 90-180 (205)
47 3ees_A Probable pyrophosphohyd 99.5 1.8E-13 6.1E-18 110.8 11.1 104 123-252 29-132 (153)
48 3fcm_A Hydrolase, nudix family 99.5 4.8E-13 1.6E-17 114.6 13.2 113 118-256 48-173 (197)
49 2fvv_A Diphosphoinositol polyp 99.5 4.4E-14 1.5E-18 121.8 6.6 105 126-257 53-157 (194)
50 3q93_A 7,8-dihydro-8-oxoguanin 99.5 3.9E-13 1.3E-17 113.5 11.6 104 123-252 32-136 (176)
51 3o8s_A Nudix hydrolase, ADP-ri 99.5 2.2E-13 7.7E-18 118.0 10.2 93 142-254 90-183 (206)
52 2kdv_A RNA pyrophosphohydrolas 99.5 1.1E-12 3.7E-17 109.5 13.9 118 117-252 10-137 (164)
53 3exq_A Nudix family hydrolase; 99.4 2.8E-13 9.6E-18 112.2 8.7 85 144-252 38-123 (161)
54 2b06_A MUTT/nudix family prote 99.4 1.9E-12 6.4E-17 105.7 12.9 85 144-252 37-121 (155)
55 2fb1_A Conserved hypothetical 99.4 3E-13 1E-17 119.3 8.4 106 131-261 31-139 (226)
56 2pqv_A MUTT/nudix family prote 99.4 8.8E-13 3E-17 107.7 10.4 91 143-251 39-130 (154)
57 1mut_A MUTT, nucleoside tripho 99.4 1.1E-13 3.8E-18 108.9 4.8 103 124-252 13-115 (129)
58 1vk6_A NADH pyrophosphatase; 1 99.4 8.7E-13 3E-17 119.7 11.2 105 122-254 146-250 (269)
59 3fjy_A Probable MUTT1 protein; 99.4 5.8E-12 2E-16 118.0 14.4 99 143-252 49-160 (364)
60 2qjt_B Nicotinamide-nucleotide 99.4 6.7E-12 2.3E-16 116.1 13.9 112 118-250 211-329 (352)
61 3f13_A Putative nudix hydrolas 99.3 6.5E-12 2.2E-16 105.2 11.7 76 143-247 37-112 (163)
62 2fml_A MUTT/nudix family prote 99.3 1.6E-11 5.5E-16 111.2 15.1 95 131-249 59-156 (273)
63 3fk9_A Mutator MUTT protein; s 99.3 4.3E-12 1.5E-16 108.4 10.5 90 142-252 25-116 (188)
64 3gz5_A MUTT/nudix family prote 99.3 4.7E-12 1.6E-16 112.6 10.1 110 131-262 40-153 (240)
65 2qjo_A Bifunctional NMN adenyl 99.3 4.5E-12 1.5E-16 116.4 9.8 114 118-250 206-322 (341)
66 1k2e_A Nudix homolog; nudix/MU 99.3 3.9E-12 1.3E-16 104.6 8.0 34 143-177 23-56 (156)
67 1x51_A A/G-specific adenine DN 99.3 2.7E-11 9.2E-16 99.2 11.4 86 142-252 48-135 (155)
68 3dup_A MUTT/nudix family prote 99.3 2E-11 6.8E-16 112.5 11.1 175 78-274 80-269 (300)
69 3e57_A Uncharacterized protein 99.2 2.2E-11 7.5E-16 107.0 5.1 86 143-252 97-190 (211)
70 2dho_A Isopentenyl-diphosphate 99.1 1.5E-10 5.2E-15 102.8 8.8 114 117-253 61-193 (235)
71 2pny_A Isopentenyl-diphosphate 99.0 3.1E-10 1.1E-14 101.5 8.1 114 117-253 72-204 (246)
72 1q33_A Pyrophosphatase, ADP-ri 99.0 1.4E-09 4.8E-14 99.5 9.8 110 143-259 150-271 (292)
73 3fsp_A A/G-specific adenine gl 98.8 1E-08 3.5E-13 96.5 9.2 101 120-252 245-347 (369)
74 3qsj_A Nudix hydrolase; struct 98.8 2.3E-08 8E-13 88.8 9.7 33 143-176 40-92 (232)
75 3kvh_A Protein syndesmos; NUDT 98.6 6.4E-08 2.2E-12 83.8 7.1 117 143-274 54-181 (214)
76 3rh7_A Hypothetical oxidoreduc 98.5 3E-07 1E-11 85.3 10.5 113 118-273 186-300 (321)
77 3bho_A Cleavage and polyadenyl 98.1 2.2E-05 7.7E-10 68.3 10.5 102 144-260 84-196 (208)
No 1
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.95 E-value=2.6e-27 Score=207.02 Aligned_cols=172 Identities=23% Similarity=0.334 Sum_probs=133.2
Q ss_pred ChhhhhhcccceeeeeceEEEEEEEEE--eCCC---cEEEEEEEEeeeeecCCEEEEEEEe-cceeeeccCeeeeeCCC-
Q 023875 69 SESDFRCAVESTLFKQWLKNLQSETGI--LANG---DMLLKQVLIQGVDMFGKRIGFLKFK-ADIFCKETGQKVRVPTG- 141 (276)
Q Consensus 69 ~~~~~~~~~~~~~f~~~~~~l~~~~~~--~~~G---~~~~~~v~~~~v~~~g~~V~vl~~~-~d~~~~~~~rq~R~~~g- 141 (276)
...+.+.+.+..+|++ |++++.+.++ +||| ....|+++.+ +++|+|++++ .+..+ .+++|+|++.+
T Consensus 12 ~~~~~~~~~~~~v~~g-~~~v~~~~~~~~~~~g~~~~~~~r~~~~~-----~~av~vl~~~~~~~~v-LLvrq~R~~~~~ 84 (209)
T 1g0s_A 12 GKNDVEIIARETLYRG-FFSLDLYRFRHRLFNGQMSHEVRREIFER-----GHAAVLLPFDPVRDEV-VLIEQIRIAAYD 84 (209)
T ss_dssp CGGGEEEEEEEEEEES-SSEEEEEEEEEBCTTSCBCCCEEEEEEEC-----CCEEEEEEEETTTTEE-EEEEEECGGGGG
T ss_pred CCCCcEEEEEEEEEee-eEEEEEEEEEEEcCCCCcceEEEEEEEeC-----CCEEEEEEEECCCCEE-EEEEeecccCCC
Confidence 3344555558999998 7999998886 6888 4667777765 6899999998 34544 58999999986
Q ss_pred ----CeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehh
Q 023875 142 ----RVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDK 217 (276)
Q Consensus 142 ----~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~ 217 (276)
.+.||||||++|+| |++++||+||++||||+.+. .+..++ .+|++||.+++.+++|++......
T Consensus 85 ~~~~~~~welPgG~ve~g-E~~~~aA~REl~EEtGl~~~--~~~~l~---------~~~~~~g~~~~~~~~f~a~~~~~~ 152 (209)
T 1g0s_A 85 TSETPWLLEMVAGMIEEG-ESVEDVARREAIEEAGLIVK--RTKPVL---------SFLASPGGTSERSSIMVGEVDATT 152 (209)
T ss_dssp GSSCSEEEECEEEECCTT-CCHHHHHHHHHHHHHCCCCC--CEEEEE---------EEESCTTTBCCEEEEEEEECCGGG
T ss_pred CCCCCeEEEeCcccCCCC-cCHHHHHHHHHHHHcCcccC--cEEEeE---------EEecCCCccCcEEEEEEEEEcccc
Confidence 68999999999998 99999999999999999996 788887 488999999999999998753211
Q ss_pred hHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC-----ChhHHHHHHHHHH
Q 023875 218 EIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIALYEM 265 (276)
Q Consensus 218 ~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~-----d~ktl~al~l~~~ 265 (276)
. .+. .+..+++|.+++.|++++++.+++. |+++++|+.++..
T Consensus 153 ~-----~~~-~~~~~e~E~~~~~w~~~~el~~~i~~g~i~d~~t~~al~~~~~ 199 (209)
T 1g0s_A 153 A-----SGI-HGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQL 199 (209)
T ss_dssp C-----C---------CCSCEEEEEEHHHHHHHHHTTSSCBHHHHHHHHHHHH
T ss_pred c-----cCC-CCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 0 010 1135788999999999999998864 8899888876543
No 2
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.94 E-value=3.4e-26 Score=198.37 Aligned_cols=170 Identities=15% Similarity=0.117 Sum_probs=138.7
Q ss_pred ccceeeeeceEEEEEEEEEeCCCcEEEEEEEEeeeeecCCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCC
Q 023875 77 VESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDK 156 (276)
Q Consensus 77 ~~~~~f~~~~~~l~~~~~~~~~G~~~~~~v~~~~v~~~g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~ 156 (276)
.+..+|+++|++++.+.+++|||....|+++... .+++|+|++++.+ .+ .+++|+|.+.+.+.|+||||++|+|
T Consensus 14 ~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~~~~~---~~~av~vl~~~~~-~v-LLvrq~r~~~~~~~welPgG~ve~g- 87 (198)
T 1vhz_A 14 NVETVARSRLFTVESVDLEFSNGVRRVYERMRPT---NREAVMIVPIVDD-HL-ILIREYAVGTESYELGFSKGLIDPG- 87 (198)
T ss_dssp EEEEEEECSSCEEEEEEEECTTSCEEEEEEECCC---CCCEEEEEEEETT-EE-EEEEEEETTTTEEEEECEEEECCTT-
T ss_pred eEEEEEECCEEEEEEEEEEcCCCCEEEEEEEEeC---CCCEEEEEEEECC-EE-EEEEcccCCCCCcEEEeCcccCCCC-
Confidence 3789999999999999999999998888776421 2468999999888 44 5899999998888999999999998
Q ss_pred CCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCce
Q 023875 157 GDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGEL 236 (276)
Q Consensus 157 Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~ 236 (276)
|++++||+||++||||+.+. .+..++ .++++++.+++.+++|++...... . ...+++|.
T Consensus 88 Es~~~aA~REl~EEtGl~~~--~~~~l~---------~~~~~~~~~~~~~~~f~a~~~~~~--------~--~~~~~~E~ 146 (198)
T 1vhz_A 88 ESVYEAANRELKEEVGFGAN--DLTFLK---------KLSMAPSYFSSKMNIVVAQDLYPE--------S--LEGDEPEP 146 (198)
T ss_dssp CCHHHHHHHHHHHHHSEEEE--EEEEEE---------EEECCTTTCCCEEEEEEEEEEEEC--------C--CCCCCSSC
T ss_pred cCHHHHHHHHHHHHHCCCcC--ceEEEE---------EEeCCCCccCcEEEEEEEEeCCcc--------c--CCCCCCce
Confidence 99999999999999999996 677776 377788888899999998764321 1 13477899
Q ss_pred EEEEEEchhhHhhhcC-----ChhHHHHHHHHH-HHHhCCCCC
Q 023875 237 IKVRVVPYRELWRTTP-----DAKVLTAIALYE-MASKEELLP 273 (276)
Q Consensus 237 i~v~wv~leel~~~i~-----d~ktl~al~l~~-~l~~~g~l~ 273 (276)
+++.|++++++.+++. |+++++|+.++. .++.++++.
T Consensus 147 ~~~~w~~~~el~~~~~~~~i~~~~~~~al~~~~~~~~~~~~~~ 189 (198)
T 1vhz_A 147 LPQVRWPLAHMMDLLEDPDFNEARNVSALFLVREWLKGQGRVE 189 (198)
T ss_dssp CCEEEEEGGGGGGGGGCTTTCBHHHHHHHHHHHHHHHHTTC--
T ss_pred EEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccccccc
Confidence 9999999999999875 789999987765 445556543
No 3
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.93 E-value=2.1e-25 Score=194.13 Aligned_cols=171 Identities=19% Similarity=0.207 Sum_probs=128.3
Q ss_pred hcccceeeeeceEEEEEEEEEeCCCcEEEEEEEEeeeeecCCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecC-
Q 023875 75 CAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLD- 153 (276)
Q Consensus 75 ~~~~~~~f~~~~~~l~~~~~~~~~G~~~~~~v~~~~v~~~g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD- 153 (276)
.+.+..+|+++|+++..+.+++|||....|+++.+ +++|+++.++.++.+ .+++|+|.+.+...|+||||++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~-----~~av~v~i~~~~~~v-LLvrr~r~~~~~~~w~lPgG~ve~ 81 (207)
T 1mk1_A 8 TISSETLHTGAIFALRRDQVRMPGGGIVTREVVEH-----FGAVAIVAMDDNGNI-PMVYQYRHTYGRRLWELPAGLLDV 81 (207)
T ss_dssp EEEEEEEEECSSEEEEEEEEC-----CEEEEEEEE-----CCEEEEEECCTTSEE-EEEEEEETTTTEEEEECCEEECCS
T ss_pred EEeEEEEEeCCEEEEEEEEEECCCCCEEEEEEEeC-----CCEEEEEEEcCCCEE-EEEEeecCCCCCcEEEeCCccccC
Confidence 34479999999999999999999998888887765 578999999877766 58999999988889999999999
Q ss_pred CCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCC
Q 023875 154 DDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDH 233 (276)
Q Consensus 154 ~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~ 233 (276)
+| |++.+||+||++||||+.+. .+..++ .+|.+++.+++.+++|++....... .....++
T Consensus 82 ~g-Es~~~aa~REl~EEtGl~~~--~~~~l~---------~~~~~~~~~~~~~~~f~~~~~~~~~--------~~~~~~~ 141 (207)
T 1mk1_A 82 AG-EPPHLTAARELREEVGLQAS--TWQVLV---------DLDTAPGFSDESVRVYLATGLREVG--------RPEAHHE 141 (207)
T ss_dssp TT-CCHHHHHHHHHHHHHCEEEE--EEEEEE---------EECSCTTTBCCCEEEEEEEEEEECC--------C------
T ss_pred CC-CCHHHHHHHHHHHHHCCccc--ccEEEE---------EEEcCCCccccEEEEEEEEccccCC--------CCCCCCC
Confidence 98 99999999999999999996 566666 3688888888889999987543211 0001467
Q ss_pred CceEEEEEEchhhHhhhcC-----ChhHHHHHHHHHHHHhCCC
Q 023875 234 GELIKVRVVPYRELWRTTP-----DAKVLTAIALYEMASKEEL 271 (276)
Q Consensus 234 ~E~i~v~wv~leel~~~i~-----d~ktl~al~l~~~l~~~g~ 271 (276)
+|.+++.|++++++.+++. |+++++++.++...++.+.
T Consensus 142 ~E~~~~~Wv~~~el~~~~~~~~i~~~~~~~al~~~~~~~~~~~ 184 (207)
T 1mk1_A 142 EADMTMGWYPIAEAARRVLRGEIVNSIAIAGVLAVHAVTTGFA 184 (207)
T ss_dssp ----CEEEEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHHTTSC
T ss_pred CceEEEEEEEHHHHHHHHHcCCcCCHHHHHHHHHHHHHhcccc
Confidence 8899999999999988864 7888888877765555443
No 4
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.93 E-value=4.1e-25 Score=192.92 Aligned_cols=159 Identities=18% Similarity=0.174 Sum_probs=125.6
Q ss_pred ccceeeeeceEEEEEEEEEeCCCcEEEEEEEEeeee--ecCCEEEEEEEecce----eeeccCeeeeeCCCCeEEEecee
Q 023875 77 VESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVD--MFGKRIGFLKFKADI----FCKETGQKVRVPTGRVILELPAG 150 (276)
Q Consensus 77 ~~~~~f~~~~~~l~~~~~~~~~G~~~~~~v~~~~v~--~~g~~V~vl~~~~d~----~~~~~~rq~R~~~g~~~wElPaG 150 (276)
.+..+|+++|++++.+.+++|||....|+++.+... ..+++|+|+++..+. .+ .+++|+|++.+.+.|+||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~av~v~~v~~~~~~~~~v-lLv~q~R~~~~~~~welPgG 99 (212)
T 2dsc_A 21 SEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECI-VLVKQFRPPMGGYCIEFPAG 99 (212)
T ss_dssp EEEEEEECSSEEEEEEEEECTTSCEEEEEEEEETTCCTTSCSEEEEEEEEECTTSCCEE-EEEEEEEGGGTEEEEECCEE
T ss_pred eEEEEeeCCEEEEEEEEEECCCCCEEEEEEEEeeccCCCCCCEEEEEEEEeCCCCCcEE-EEEEeecCCCCCcEEECCcc
Confidence 368899999999999999999999888888765211 124689999886553 33 58999999988889999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCC
Q 023875 151 MLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGL 230 (276)
Q Consensus 151 ~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~ 230 (276)
++|+| |++.+||+||++||||+.+. .+..++ .+|.+|+++++.+++|++........ .. +. ...
T Consensus 100 ~ve~g-Es~~~aA~REl~EEtGl~~~--~~~~l~---------~~~~~~~~~~~~~~~~~a~~~~~~~~--~~-~~-~~~ 163 (212)
T 2dsc_A 100 LIDDG-ETPEAAALRELEEETGYKGD--IAECSP---------AVCMDPGLSNCTIHIVTVTINGDDAE--NA-RP-KPK 163 (212)
T ss_dssp ECCTT-CCHHHHHHHHHHHHHCCCCE--EEEECC---------CEESCTTTBCCEEEEEEEEEETTSGG--GS-SC-CCC
T ss_pred ccCCC-CCHHHHHHHHHHHHhCCCcc--ceEEec---------cEEcCCCccCceEEEEEEEEeCcccc--cc-CC-CCC
Confidence 99998 99999999999999999986 455554 37888999999999999874322110 00 00 113
Q ss_pred CCCCceEEEEEEchhhHhhhcC
Q 023875 231 RDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 231 ~d~~E~i~v~wv~leel~~~i~ 252 (276)
.+++|.+++.|++++++.+++.
T Consensus 164 ~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 164 PGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp CCTTCCCEEEEEEGGGHHHHHH
T ss_pred CCCCceEEEEEEEHHHHHHHHH
Confidence 5788999999999999998875
No 5
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.92 E-value=1e-24 Score=187.66 Aligned_cols=160 Identities=21% Similarity=0.284 Sum_probs=122.7
Q ss_pred cceeeeeceEEEEEEEEEe--CCCcE--EEEEEEEeeeeecCCEEEEEEEecc-eeeeccCeeeeeCC------CCeEEE
Q 023875 78 ESTLFKQWLKNLQSETGIL--ANGDM--LLKQVLIQGVDMFGKRIGFLKFKAD-IFCKETGQKVRVPT------GRVILE 146 (276)
Q Consensus 78 ~~~~f~~~~~~l~~~~~~~--~~G~~--~~~~v~~~~v~~~g~~V~vl~~~~d-~~~~~~~rq~R~~~------g~~~wE 146 (276)
+...+.+.|++|+.+.+.+ +||.. ..|+++.+ +++|++++++.+ ..+ .+++|+|+|. +.+.|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~r~~~~~-----~~av~v~~~~~~~~~v-lLv~~~r~~~~~~~~~~~~~w~ 82 (191)
T 3o6z_A 9 KDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR-----GNGATILLYNTKKKTV-VLIRQFRVATWVNGNESGQLIE 82 (191)
T ss_dssp EEEEEECSSSEEEEEEEEEECTTSCEEEEEEEEEEC-----CCEEEEEEEETTTTEE-EEEEEECHHHHTTTCTTCEEEE
T ss_pred EeEEEecCcEEEEEEEEEEECCCCCEEEEEEEEEec-----CCEEEEEEEECCCCEE-EEEEcCCccccccCCCCCeEEE
Confidence 4445555889999998855 99974 34565544 678999999853 444 5899999887 888999
Q ss_pred eceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCC
Q 023875 147 LPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGK 226 (276)
Q Consensus 147 lPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~ 226 (276)
||||++| | |++.+||+||++||||+.+. .+..++ .+|++++.+++.+++|++....... . +.
T Consensus 83 lPgG~ve-g-E~~~~aa~REl~EEtG~~~~--~~~~l~---------~~~~~~~~~~~~~~~f~~~~~~~~~-~----~~ 144 (191)
T 3o6z_A 83 SCAGLLD-N-DEPEVCIRKEAIEETGYEVG--EVRKLF---------ELYMSPGGVTELIHFFIAEYSDNQR-A----NA 144 (191)
T ss_dssp CEEEECC-S-SCHHHHHHHHHHHHC-CCCS--CEEEEE---------EEESCTTTBCCEEEEEEEECCTTCC--------
T ss_pred ecceEeC-C-CCHHHHHHHHHHHHhCCccC--cEEEEE---------EEEeCCCccCcEEEEEEEEEccccc-c----cC
Confidence 9999999 8 99999999999999999996 688887 4889999999999999987542110 0 00
Q ss_pred CCCCCCCCceEEEEEEchhhHhhhcC-----ChhHHHHHHHH
Q 023875 227 ETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIALY 263 (276)
Q Consensus 227 ~~g~~d~~E~i~v~wv~leel~~~i~-----d~ktl~al~l~ 263 (276)
.+. .++|.+++.|++++++.+++. |+++++|+.++
T Consensus 145 -~~~-~~~E~~~~~w~~~~el~~~~~~g~i~d~~t~~al~~~ 184 (191)
T 3o6z_A 145 -GGG-VEDEAIEVLELPFSQALEMIKTGEIRDGKTVLLLNYL 184 (191)
T ss_dssp -------CCSSEEEEEEHHHHHHHHHHSSCCBHHHHHHHHHH
T ss_pred -CCC-CCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 011 278899999999999999874 88998888654
No 6
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.91 E-value=5.5e-24 Score=180.20 Aligned_cols=163 Identities=21% Similarity=0.184 Sum_probs=130.8
Q ss_pred ccceeeeeceEEEEEEEEEeCCCcE-EEEEEEEeeeeecCCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCC
Q 023875 77 VESTLFKQWLKNLQSETGILANGDM-LLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDD 155 (276)
Q Consensus 77 ~~~~~f~~~~~~l~~~~~~~~~G~~-~~~~v~~~~v~~~g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G 155 (276)
.+..+|+++ +++..+.++++||.. ..|.++.+ +++|+++.++.++.+ .+++++|.+.+...|+||||++|+|
T Consensus 8 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~-----~~~v~v~i~~~~~~v-LL~~r~~~~~~~~~w~~PgG~ve~g 80 (182)
T 2yvp_A 8 LLEEILSEP-VRLVKERVRTHTGRELTYVYRPGP-----VAASFVLPVTERGTA-LLVRQYRHPTGKFLLEVPAGKVDEG 80 (182)
T ss_dssp EEEEEECSS-SCEEEEEEECTTSCEEEEEEBCSS-----CEEEEEEEBCTTSEE-EEEEEEEGGGTEEEEECCEEECCTT
T ss_pred eeEEEEeCc-EEEEEEEEECCCCCEeeEEEEEec-----CCEEEEEEEcCCCEE-EEEEeccCCCCCcEEEeccccCCCC
Confidence 378999999 999999999999987 66665543 467888888777765 5889899887788999999999998
Q ss_pred CCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCc
Q 023875 156 KGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGE 235 (276)
Q Consensus 156 ~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E 235 (276)
|++.+||+||++||||+.+. .+..++. +++.++..+..+++|++...... +. ...+++|
T Consensus 81 -Es~~~aa~REl~EEtGl~~~--~~~~l~~---------~~~~~~~~~~~~~~f~~~~~~~~-------~~--~~~~~~E 139 (182)
T 2yvp_A 81 -ETPEAAARRELREEVGAEAE--TLIPLPS---------FHPQPSFTAVVFHPFLALKARVV-------TP--PTLEEGE 139 (182)
T ss_dssp -CCHHHHHHHHHHHHHCEECS--CEEECCC---------BCSCTTTBCCEEEEEEECSCEEC-------SC--CCCCTTC
T ss_pred -cCHHHHHHHHHHHHhCCCcc--cEEEEEE---------EeCCCCccccEEEEEEEeccccC-------CC--CCCCCCc
Confidence 99999999999999999986 6677763 66677777888888988643211 11 1347789
Q ss_pred eEEEEEEchhhHhhhcC-----ChhHHHHHHHHHHHH
Q 023875 236 LIKVRVVPYRELWRTTP-----DAKVLTAIALYEMAS 267 (276)
Q Consensus 236 ~i~v~wv~leel~~~i~-----d~ktl~al~l~~~l~ 267 (276)
..++.|++++++.+++. |+++++|+.++..+.
T Consensus 140 ~~~~~W~~~~el~~~~~~~~~~~~~~~~al~~~~~~~ 176 (182)
T 2yvp_A 140 LLESLELPLTEVYALLAKGEIQDASTALTLFYAEPHL 176 (182)
T ss_dssp CEEEEEEEHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEHHHHHHHHHcCCcCChHHHHHHHHHHHHH
Confidence 99999999999988763 888988887776443
No 7
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.3e-23 Score=185.73 Aligned_cols=146 Identities=21% Similarity=0.224 Sum_probs=94.4
Q ss_pred EEEEEEeCCCcEEEEEEEEeeeeecCCEEEEEEEecceeeeccCeeeeeCCC----------------------------
Q 023875 90 QSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVRVPTG---------------------------- 141 (276)
Q Consensus 90 ~~~~~~~~~G~~~~~~v~~~~v~~~g~~V~vl~~~~d~~~~~~~rq~R~~~g---------------------------- 141 (276)
....+..+||....|+++.+ +++|+||+++.+...+.++||||++..
T Consensus 16 ~~~~~~~~~G~~~~~e~v~~-----~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (218)
T 3q91_A 16 ENLYFQSMNGAQKSWDFMKT-----HDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALP 90 (218)
T ss_dssp -------------------C-----CCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-----------------------
T ss_pred eEEEEECCCCCEEEEEEEEc-----CCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccc
Confidence 34456678999888998775 689999999853222368999998865
Q ss_pred ---CeEEEeceeecCC-CCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehh
Q 023875 142 ---RVILELPAGMLDD-DKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDK 217 (276)
Q Consensus 142 ---~~~wElPaG~vD~-G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~ 217 (276)
++.||||||++|+ | |++++||+||++||||+.+....+..++. ++++++.+++.+++|+++.....
T Consensus 91 ~~~~~~welPgG~ve~~g-Es~~eaA~REl~EEtGl~~~~~~l~~l~~---------~~~~~g~~~~~~~~f~a~~~~~~ 160 (218)
T 3q91_A 91 GSAGVTVELCAGLVDQPG-LSLEEVACKEAWEECGYHLAPSDLRRVAT---------YWSGVGLTGSRQTMFYTEVTDAQ 160 (218)
T ss_dssp --CCEEEECEEEECCSSS-CCHHHHHHHHHHHHHCBCCCGGGCEEEEE---------EEEC---CCEEEEEEEEEECGGG
T ss_pred cCCCeEEECCcceeCCCC-CCHHHHHHHHHHHHhCCccccCceEEEEE---------EecCCCccceEEEEEEEEECCcc
Confidence 6899999999999 8 99999999999999999995557888874 78889999999999999764221
Q ss_pred hHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChh
Q 023875 218 EIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAK 255 (276)
Q Consensus 218 ~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~k 255 (276)
. . +...+..+++|.+++.|++++++.+++.+++
T Consensus 161 ~----~-~~~~~~~d~~E~~ev~wv~l~el~~~i~~g~ 193 (218)
T 3q91_A 161 R----S-GPGGGLVEEGELIEVVHLPLEGAQAFADDPD 193 (218)
T ss_dssp B----C-C---------CCEEEEEEEGGGHHHHHHCTT
T ss_pred c----c-cCCCCCCCCCcEEEEEEEEHHHHHHHHHcCC
Confidence 0 0 0011246788999999999999999987543
No 8
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.88 E-value=3.9e-22 Score=163.34 Aligned_cols=134 Identities=21% Similarity=0.215 Sum_probs=103.1
Q ss_pred cCCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCce
Q 023875 114 FGKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 193 (276)
Q Consensus 114 ~g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~ 193 (276)
++++|++++++.++.+ .+++|+|.+.+...|+||||++|+| |++.+||+||++||||+.+. .+..++.
T Consensus 4 ~~~~v~vi~~~~~~~v-LLv~~~r~~~~~~~w~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~--~~~~l~~-------- 71 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEA-VLIRQFRYPLRATITEIVAGGVEKG-EDLGAAAARELLEEVGGAAS--EWVPLPG-------- 71 (145)
T ss_dssp CCEEEEEEEEETTSEE-EEEEEEETTTTEEEEECEEEECCTT-CCHHHHHHHHHHHHHCEECS--EEEECCC--------
T ss_pred eCCEEEEEEEcCCCEE-EEEEEEecCCCCCEEEeCCccCCCC-CCHHHHHHHHHHHhhCCccC--eEEEEec--------
Confidence 3568999999877765 5899999988888999999999998 99999999999999999986 5777763
Q ss_pred eeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC-----ChhHHHHHHHHH-HHH
Q 023875 194 KFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIALYE-MAS 267 (276)
Q Consensus 194 ~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~-----d~ktl~al~l~~-~l~ 267 (276)
+|++++..++.+++|++..... +.. ..+++|..+++|++++++.+++. |+++++|+.++. .++
T Consensus 72 -~~~~~~~~~~~~~~f~~~~~~~--------~~~--~~~~~E~~~~~w~~~~el~~~~~~~~~~~~~~~~a~~~~~~~~~ 140 (145)
T 2w4e_A 72 -FYPQPSISGVVFYPLLALGVTL--------GAA--QLEDTETIERVVLPLAEVYRMLEAGEIQDGPSSLTLWQARGELT 140 (145)
T ss_dssp -BBSCTTTCCCEEEEEEEEEEEE--------C----------CEEEEEEEHHHHHHHHHHTCCCBHHHHHHHHHHHHHHH
T ss_pred -CcCCCCccCceEEEEEEEeccc--------CCC--CCCCCCeEEEEEEeHHHHHHHHHcCCcCcHHHHHHHHHHHHHhh
Confidence 6778888888889998874321 111 24678899999999999988763 889998887665 444
Q ss_pred hCC
Q 023875 268 KEE 270 (276)
Q Consensus 268 ~~g 270 (276)
+.+
T Consensus 141 ~~~ 143 (145)
T 2w4e_A 141 RRG 143 (145)
T ss_dssp HTT
T ss_pred hhc
Confidence 444
No 9
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.87 E-value=6.4e-22 Score=165.92 Aligned_cols=152 Identities=23% Similarity=0.308 Sum_probs=115.3
Q ss_pred cceeeeeceEEEEEEEEEeCCCcEEEEEEEEeeeeecCCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCC
Q 023875 78 ESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKG 157 (276)
Q Consensus 78 ~~~~f~~~~~~l~~~~~~~~~G~~~~~~v~~~~v~~~g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~E 157 (276)
+..+|+++|++++.+ ..|+++.+ .++|+++.++ ++.+ .+++++|.+.+...|++|||++|+| |
T Consensus 11 ~~~~~~~~~~~v~~~---------~~~~~~~~-----~~~v~vii~~-~~~v-LL~~~~r~~~~~~~w~lPgG~ve~g-E 73 (170)
T 1v8y_A 11 RTYLYRGRILNLALE---------GRYEIVEH-----KPAVAVIALR-EGRM-LFVRQMRPAVGLAPLEIPAGLIEPG-E 73 (170)
T ss_dssp CEEEEECSSEEEEEE---------TTEEEEEE-----CCEEEEEEEE-TTEE-EEEECCBTTTTBCCBBCSEEECCTT-C
T ss_pred EEEEEECCeEEEEEE---------eeEEEEec-----CCeEEEEEEE-CCEE-EEEEEEeCCCCCCEEECCccccCCC-C
Confidence 799999999999887 23555544 4688888888 6555 5888899887778999999999998 9
Q ss_pred CHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceE
Q 023875 158 DFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELI 237 (276)
Q Consensus 158 s~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i 237 (276)
++.+||+||++||||+ +. .+..++. ++..++..+..+++|++...... . ...+++|..
T Consensus 74 s~~~aa~REl~EEtGl-~~--~~~~l~~---------~~~~~~~~~~~~~~f~~~~~~~~--------~--~~~~~~E~~ 131 (170)
T 1v8y_A 74 DPLEAARRELAEQTGL-SG--DLTYLFS---------YFVSPGFTDEKTHVFLAENLKEV--------E--AHPDEDEAI 131 (170)
T ss_dssp CHHHHHHHHHHHHHSE-EE--EEEEEEE---------EESCTTTBCCEEEEEEEEEEEEC--------C----------C
T ss_pred CHHHHHHHHHHHHHCC-Cc--CceeeEE---------EecCCCccccEEEEEEEEecccc--------C--CCCCCCceE
Confidence 9999999999999999 65 6777763 67777877888889988753211 1 123678899
Q ss_pred EEEEEchhhHhhhc-----C-ChhHHHHHHHHHHHHh
Q 023875 238 KVRVVPYRELWRTT-----P-DAKVLTAIALYEMASK 268 (276)
Q Consensus 238 ~v~wv~leel~~~i-----~-d~ktl~al~l~~~l~~ 268 (276)
++.|++++++.+++ . |+++++|+.+|..+++
T Consensus 132 ~~~W~~~~el~~~~~~~~~~~~~~~~~al~~~~~~~~ 168 (170)
T 1v8y_A 132 EVVWMRPEEALERHQRGEVEFSATGLVGVLYYHAFLR 168 (170)
T ss_dssp EEEEECHHHHHHHHHTTSCCBCHHHHHHHHHHHHHCC
T ss_pred EEEEEEHHHHHHHHHCCCEecCHHHHHHHHHHHHHhh
Confidence 99999999998875 4 7889898877755443
No 10
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.66 E-value=9.2e-16 Score=130.98 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=93.5
Q ss_pred EEeCCCcEEEEEEEEee-eeec-CC--EEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHH
Q 023875 94 GILANGDMLLKQVLIQG-VDMF-GK--RIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEE 169 (276)
Q Consensus 94 ~~~~~G~~~~~~v~~~~-v~~~-g~--~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~E 169 (276)
+++|||....+.++.+. ...| .. .|++|.+. ++.+ .++++.+.+. ...|+||||++|+| |++.+||+||++|
T Consensus 15 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~v~~ii~~-~~~v-LL~~r~~~~~-~g~w~lPgG~ve~g-Es~~~aa~REl~E 90 (189)
T 3cng_A 15 LRIPEGDTLPRYICPKCHTIHYQNPKVIVGCIPEW-ENKV-LLCKRAIAPY-RGKWTLPAGFMENN-ETLVQGAARETLE 90 (189)
T ss_dssp EECCTTCSSCEEEETTTTEEECCCCEEEEEEEEEE-TTEE-EEEEESSSSS-TTCEECSEEECCTT-CCHHHHHHHHHHH
T ss_pred cccccCCCCcceECCCCCCccCCCCceEEEEEEEe-CCEE-EEEEccCCCC-CCeEECceeeccCC-CCHHHHHHHHHHH
Confidence 45677766555544331 0011 12 45555565 4444 4777766554 44799999999998 9999999999999
Q ss_pred HhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHh-
Q 023875 170 ETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW- 248 (276)
Q Consensus 170 ETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~- 248 (276)
|||+.+.... .++ ++..++. +..+++|++.... +. ...++|..+++|++++++.
T Consensus 91 EtGl~~~~~~--~~~----------~~~~~~~-~~~~~~f~~~~~~---------~~---~~~~~E~~~~~W~~~~el~~ 145 (189)
T 3cng_A 91 EANARVEIRE--LYA----------VYSLPHI-SQVYMLFRAKLLD---------LD---FFPGIESLEVRLFGEQEIPW 145 (189)
T ss_dssp HHCCCEEEEE--EEE----------EEEEGGG-TEEEEEEEEEECC---------SC---CCCCTTEEEEEEECTTTCCG
T ss_pred HHCCccccce--eEE----------EEecCCC-cEEEEEEEEEeCC---------Cc---cCCCccceeEEEECHHHcCc
Confidence 9999986322 222 3433443 5667778776531 11 2246789999999999997
Q ss_pred hhcCChhHHHHHHHHHHHHhCCCCC
Q 023875 249 RTTPDAKVLTAIALYEMASKEELLP 273 (276)
Q Consensus 249 ~~i~d~ktl~al~l~~~l~~~g~l~ 273 (276)
..+.......++..|...++.|..+
T Consensus 146 ~~l~~~~~~~~l~~~l~~~~~~~~~ 170 (189)
T 3cng_A 146 NDIAFRVIHDPLKRYMEERHHGQPA 170 (189)
T ss_dssp GGBSCHHHHHHHHHHHHHHHHSSCC
T ss_pred ccccChHHHHHHHHHHHhccCCCcc
Confidence 3343333334444444444445443
No 11
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.66 E-value=1.9e-15 Score=123.76 Aligned_cols=114 Identities=18% Similarity=0.178 Sum_probs=78.2
Q ss_pred EEEEEEEecceeeeccCeeee---eCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCce
Q 023875 117 RIGFLKFKADIFCKETGQKVR---VPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 193 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R---~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~ 193 (276)
+++++.++.++.+ .+.++.| .+.....|+||||++|.| |++.+||+||++||||+.+. .+..++.+
T Consensus 15 ~~~~vi~~~~~~v-Ll~~r~~~~~~~~~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~--~~~~l~~~------- 83 (159)
T 1sjy_A 15 AAGVVLLNERGDI-LLVQEKGIPGHPEKAGLWHIPSGAVEDG-ENPQDAAVREACEETGLRVR--PVKFLGAY------- 83 (159)
T ss_dssp EEEEEEBCTTCCE-EEEEESCC----CCCCCEECSEEECCTT-SCHHHHHHHHHHHHHSCCEE--EEEEEEEE-------
T ss_pred eEEEEEEeCCCCE-EEEEecccCcCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHHCccce--eeEEEEEE-------
Confidence 3555666655555 4677666 344556899999999998 99999999999999999986 45555431
Q ss_pred eeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCC-CCCceEEEEEEchhhHhhhcC
Q 023875 194 KFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLR-DHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 194 ~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~-d~~E~i~v~wv~leel~~~i~ 252 (276)
.+..+......+++|++.... +... .. +++|..++.|++++++.+++.
T Consensus 84 -~~~~~~~~~~~~~~f~~~~~~---------~~~~-~~~~~~E~~~~~W~~~~el~~~~~ 132 (159)
T 1sjy_A 84 -LGRFPDGVLILRHVWLAEPEP---------GQTL-APAFTDEIAEASFVSREDFAQLYA 132 (159)
T ss_dssp -EEECTTSCEEEEEEEEEEECS---------SCCC-CCCCCSSEEEEEEECHHHHHHHHH
T ss_pred -ecccCCCceEEEEEEEEEccC---------CCcc-ccCCCCceeEEEEecHHHHHHhhh
Confidence 111222245567777776431 1101 22 678899999999999998875
No 12
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.65 E-value=2.8e-15 Score=122.37 Aligned_cols=99 Identities=20% Similarity=0.142 Sum_probs=71.1
Q ss_pred ceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeE
Q 023875 126 DIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE 205 (276)
Q Consensus 126 d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~ 205 (276)
++.+ .++++. ..+...|++|||++|+| |++.+||+||++||||+.+.. ...++. ..|..++.....
T Consensus 15 ~~~v-Ll~~r~--~~~~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~--~~~~~~--------~~~~~~~~~~~~ 80 (153)
T 3shd_A 15 EGKF-LVVEET--INGKALWNQPAGHLEAD-ETLVEAAARELWEETGISAQP--QHFIRM--------HQWIAPDKTPFL 80 (153)
T ss_dssp TTEE-EEEEEE--ETTEEEEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCC--CEEEEE--------EEECCTTSCCEE
T ss_pred CCEE-EEEEec--CCCCCCEECCeEEeCCC-CCHHHHHHHHHHHHHCccccc--CcEEEE--------EEEecCCCceEE
Confidence 4443 356643 44566899999999998 999999999999999999974 344432 235666666666
Q ss_pred EEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHh
Q 023875 206 ISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW 248 (276)
Q Consensus 206 i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~ 248 (276)
.++|++...... ....+++|..+++|++++++.
T Consensus 81 ~~~f~~~~~~~~----------~~~~~~~E~~~~~W~~~~el~ 113 (153)
T 3shd_A 81 RFLFAIELEQIC----------PTQPHDSDIDCCRWVSAEEIL 113 (153)
T ss_dssp EEEEEEECSSCC----------CCCCCSTTCCEEEEECHHHHH
T ss_pred EEEEEEEccccC----------cCCCCcccceeeEEecHHHhh
Confidence 677877643211 113467889999999999993
No 13
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.65 E-value=4.8e-16 Score=127.49 Aligned_cols=119 Identities=18% Similarity=0.102 Sum_probs=81.8
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
|+++.++.++.+ .++++.+.+ ....|+||||++|.| |++.+||+||++||||+.+. ....++. +..
T Consensus 23 v~~~i~~~~~~v-Ll~~r~~~~-~~~~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~--~~~~~~~---------~~~ 88 (156)
T 3gg6_A 23 VLAVFLSEQDEV-LLIQEAKRE-CRGSWYLPAGRMEPG-ETIVEALQREVKEEAGLHCE--PETLLSV---------EER 88 (156)
T ss_dssp EEEECBCTTSEE-EEEECCCTT-STTCEECSEEECCTT-CCHHHHHHHHHHHHHCEEEE--EEEEEEE---------EES
T ss_pred EEEEEEeCCCEE-EEEEecCCC-CCCEEECCeeeccCC-CCHHHHHHHHHHHhhCceeE--eeeEEEE---------EcC
Confidence 445555556555 467766554 456899999999998 99999999999999999996 4455542 332
Q ss_pred CCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhHHHHHH
Q 023875 198 SAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAIA 261 (276)
Q Consensus 198 spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ktl~al~ 261 (276)
.+ ....++|++....... .....+++|..+++|++++++.+++.++....++.
T Consensus 89 ~~---~~~~~~f~~~~~~~~~--------~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~ 141 (156)
T 3gg6_A 89 GP---SWVRFVFLARPTGGIL--------KTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVE 141 (156)
T ss_dssp ST---TEEEEEEEEEEEEECC--------CCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHH
T ss_pred CC---CEEEEEEEEEeeCCee--------ccCCCCCcceeeeEEEcHHHCcccccchhHHHHHH
Confidence 22 2355677776432110 01123567899999999999999988777654443
No 14
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.63 E-value=3.3e-15 Score=121.51 Aligned_cols=103 Identities=17% Similarity=0.102 Sum_probs=70.6
Q ss_pred cceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCC-ccC
Q 023875 125 ADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAG-GCD 203 (276)
Q Consensus 125 ~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg-~~~ 203 (276)
.++.+ .++++.+.+. ...|+||||++|+| |++.+||+||++||||+.+.. ...++. ..|..++ ...
T Consensus 17 ~~~~v-Ll~~r~~~~~-~~~w~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~--~~~~~~--------~~~~~~~~~~~ 83 (153)
T 2b0v_A 17 QDDKY-LLVEEIPRGT-AIKLNQPAGHLEPG-ESIIQACSREVLEETGHSFLP--EVLTGI--------YHWTCASNGTT 83 (153)
T ss_dssp ETTEE-EEEEECSSSS-CCEEECSEEECCTT-SCHHHHHHHHHHHHHSEEEEE--EEEEEE--------EEEEETTTTEE
T ss_pred eCCEE-EEEEEcCCCC-CCeEECCCcCcCCC-CCHHHHHHHHHHHhhCcEecc--ceEEEE--------EEEeCCCCCcE
Confidence 34444 4677666654 67899999999998 999999999999999999873 444432 1234443 222
Q ss_pred eEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhh
Q 023875 204 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT 250 (276)
Q Consensus 204 e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~ 250 (276)
..+++|++...... . ....++|..+++|++++++.++
T Consensus 84 ~~~~~f~~~~~~~~---------~-~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 84 YLRFTFSGQVVSFD---------P-DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEEEEEEEEEC---------T-TSCCCTTEEEEEEEEHHHHHHT
T ss_pred EEEEEEEEEeCCCC---------C-CCCCCCCeeeEEEecHHHHhhh
Confidence 34455666543211 0 0235678999999999999986
No 15
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.62 E-value=4.1e-15 Score=120.63 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=69.7
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
+|.|.+.++.+ .+++ | .. ..|+||||++|+| |++.+||+||++||||+.+. .+..++.. ...|+
T Consensus 7 ag~vv~~~~~v--LL~~--r-~~--g~W~~PgG~ve~g-Et~~~aa~RE~~EEtGl~~~--~~~~l~~~------~~~~~ 70 (134)
T 3i7u_A 7 AGGVLFKDGEV--LLIK--T-PS--NVWSFPKGNIEPG-EKPEETAVREVWEETGVKGE--ILDYIGEI------HYWYT 70 (134)
T ss_dssp EEEEEEETTEE--EEEE--C-TT--SCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEE--EEEEEEEE------EEEEE
T ss_pred EEEEEEECCEE--EEEE--e-CC--CcEECCeeEecCC-CCHHHHHHHHHHHhcCceEE--Eeeeeeee------eEEec
Confidence 44445554433 2454 3 22 3699999999998 99999999999999999986 34444421 11333
Q ss_pred CCCc-cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGG-CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~-~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
..+. ....+++|++.... +. ....+|..+++|++++++.+++.
T Consensus 71 ~~~~~~~~~~~~f~~~~~~---------~~---~~~~~E~~~~~W~~~~e~~~~l~ 114 (134)
T 3i7u_A 71 LKGERIFKTVKYYLMKYKE---------GE---PRPSWEVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp ETTEEEEEEEEEEEEEEEE---------EC---CCCCTTSSEEEEEEHHHHHHHBC
T ss_pred CCCceEEEEEEEEEEEEcC---------Cc---CcCChhheEEEEEEHHHHhhhcC
Confidence 3332 22344566665431 11 12346888999999999999876
No 16
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.61 E-value=1.4e-14 Score=116.58 Aligned_cols=108 Identities=19% Similarity=0.267 Sum_probs=73.1
Q ss_pred EEEEEEe--ccee--eeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCce
Q 023875 118 IGFLKFK--ADIF--CKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 193 (276)
Q Consensus 118 V~vl~~~--~d~~--~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~ 193 (276)
|+++.+. .++. + .++++.+.+.+ |+||||++|+| |++.+||+||++||||+.+. ....++
T Consensus 12 v~~vi~~~~~~~~~~v-Ll~~r~~~~~~---w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~--~~~~~~--------- 75 (139)
T 2yyh_A 12 TDVIIRLWDGENFKGI-VLIERKYPPVG---LALPGGFVEVG-ERVEEAAAREMREETGLEVR--LHKLMG--------- 75 (139)
T ss_dssp EEEEEEEEETTEEEEE-EEEEECSSSCS---EECCEEECCTT-CCHHHHHHHHHHHHHCCCCE--EEEEEE---------
T ss_pred EEEEEEEEcCCCcEEE-EEEEecCCCCc---EECccccCCCC-CCHHHHHHHHHHHHHCCCcc--cceEEE---------
Confidence 4444443 4554 4 46665554433 99999999998 99999999999999999986 333343
Q ss_pred eeecCCCc---cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHh--hhcCChh
Q 023875 194 KFFPSAGG---CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELW--RTTPDAK 255 (276)
Q Consensus 194 ~~y~spg~---~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~--~~i~d~k 255 (276)
.+..+.. ....+++|++.. . +. ....+|..+++|++++++. ++..+.+
T Consensus 76 -~~~~~~~~~~~~~~~~~f~~~~--~--------~~---~~~~~e~~~~~W~~~~el~~~~l~~~~~ 128 (139)
T 2yyh_A 76 -VYSDPERDPRAHVVSVVWIGDA--Q--------GE---PKAGSDAKKVKVYRLEEIPLDKLVFDHK 128 (139)
T ss_dssp -EECCTTSCTTSCEEEEEEEEEE--E--------SC---CCCCTTEEEEEEECTTSCCGGGBCTTHH
T ss_pred -EECCCCcCCCceEEEEEEEEec--C--------Cc---cCCCCCcceEEEEEHHHCCHhhcCCCHH
Confidence 3333322 334556777764 1 11 2356788999999999999 6665643
No 17
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.61 E-value=9.8e-15 Score=119.75 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=77.6
Q ss_pred CCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCcee
Q 023875 115 GKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 194 (276)
Q Consensus 115 g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~ 194 (276)
..+|+++.++.++.+ .++++.+.+ ..|++|+|++|+| |++.+||+||++||||+.+. .+....... .
T Consensus 14 ~~~v~~~i~~~~~~v-Ll~~r~~~~---g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~--~~~~~~~~~------~ 80 (165)
T 1f3y_A 14 RRNVGICLMNNDKKI-FAASRLDIP---DAWQMPQGGIDEG-EDPRNAAIRELREETGVTSA--EVIAEVPYW------L 80 (165)
T ss_dssp CCEEEEEEECTTSCE-EEEEETTEE---EEEECCEEECCTT-CCHHHHHHHHHHHHHCCCSE--EEEEECSSC------C
T ss_pred eeeEEEEEECCCCcE-EEEecCCCC---CcEECCeeccCCC-CCHHHHHHHHHHHhhCCChh--hhhcccccc------e
Confidence 346777777766655 466644333 5899999999998 99999999999999999875 343332100 0
Q ss_pred eecCC-------------CccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCC
Q 023875 195 FFPSA-------------GGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 253 (276)
Q Consensus 195 ~y~sp-------------g~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d 253 (276)
.|..+ ....+.+++|++.......++. .++ ...+++|..+++|++++++.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~---~~~~~~E~~~~~W~~~~el~~~~~~ 148 (165)
T 1f3y_A 81 TYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEIN-LLG---DGSEKPEFGEWSWVTPEQLIDLTVE 148 (165)
T ss_dssp BCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCC-CCC---CSSSCCSEEEEEEECHHHHHHHBCG
T ss_pred eeecCccccccccccccccccCceEEEEEEEecCCccccc-ccC---CCCCCChhheeEEecHHHHHHHhhh
Confidence 11111 1123456777776532211110 000 0125679999999999999998865
No 18
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.60 E-value=1.7e-15 Score=132.34 Aligned_cols=148 Identities=15% Similarity=0.068 Sum_probs=96.5
Q ss_pred cceeeeeceEEEEEEEEEeCCCcEEEEEEEEeeeeecCCEEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCC
Q 023875 78 ESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKG 157 (276)
Q Consensus 78 ~~~~f~~~~~~l~~~~~~~~~G~~~~~~v~~~~v~~~g~~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~E 157 (276)
.+.+|+++|+++ .+.+.+|+|....+.++.++ +..|.++.+..+..+ .+.+ |. ...|+||||++|+| |
T Consensus 12 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~----~~~vv~~i~~~~~~v-Ll~~--r~---~g~w~~PGG~ve~g-E 79 (212)
T 1u20_A 12 KEDKPRPRNISR-EESLQLEGYKHACHALLHAP----SQAKLFDRVPIRRVL-LMMM--RF---DGRLGFPGGFVDTR-D 79 (212)
T ss_dssp --CCCCSEECCH-HHHHSCSSCEEEEEEEEEEE----CCCEETTTEECCEEE-EEEE--ET---TSCEECSEEEECTT-T
T ss_pred cccccccccCCH-HHHhhcCCCcccceEEEeCC----CceEEEEEEecCCEE-EEEE--eC---CCeEECCCcccCCC-C
Confidence 477899999998 67888899988777777653 333443334444443 2433 42 45799999999998 9
Q ss_pred -CHHHHHHHHHHHHhCCcccccce---eeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHh--cCCCCCCC
Q 023875 158 -DFVGTAVREVEEETGIQLKLEDM---IDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQL--QGKETGLR 231 (276)
Q Consensus 158 -s~~eAA~REL~EETGl~~~~~~l---~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~--~g~~~g~~ 231 (276)
++++||+||++||||+.+...++ ..++. ..+..+ ....+++|++... . .++... ++.. ...
T Consensus 80 ~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~--------~~~~~~--~~~~~~~f~~~~~-~-~~~~~~e~~~~~-~~~ 146 (212)
T 1u20_A 80 ISLEEGLKRELEEELGPALATVEVTEDDYRSS--------QVREHP--QKCVTHFYIKELK-L-EEIERIEAEAVN-AKD 146 (212)
T ss_dssp SCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEE--------EEECTT--SCEEEEEEEEECC-H-HHHHHHHHHHTT-STT
T ss_pred CCHHHHHHHHHHHHHCCCccccceeeeeEEEe--------ccccCC--CcEEEEEEEEEec-C-CCcccccccccc-ccc
Confidence 99999999999999999874332 13332 122222 5667788888643 2 222110 1111 123
Q ss_pred CCCceEEEEEEchhhHhhh
Q 023875 232 DHGELIKVRVVPYRELWRT 250 (276)
Q Consensus 232 d~~E~i~v~wv~leel~~~ 250 (276)
+++|..++.|+|++++.+.
T Consensus 147 ~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 147 HGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp BTTTEEEEEECCCSBCTTS
T ss_pred CCcceEEEEEEEHHHhhhh
Confidence 5678999999999999764
No 19
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.59 E-value=4.9e-15 Score=127.41 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=73.3
Q ss_pred EEEEEEEecc-eeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceee
Q 023875 117 RIGFLKFKAD-IFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 195 (276)
Q Consensus 117 ~V~vl~~~~d-~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~ 195 (276)
+|+++.+..+ ..+ +..|.|.+ ....|+||||++|+| |++.+||+||++||||+.+....+..+. ..
T Consensus 28 ~v~~~v~~~~~~~v--LL~~r~~~-~~g~w~lPGG~ve~g-Es~~~aA~REl~EEtGl~~~~~~l~~~~---------~~ 94 (199)
T 3h95_A 28 GVAGAVFDESTRKI--LVVQDRNK-LKNMWKFPGGLSEPE-EDIGDTAVREVFEETGIKSEFRSVLSIR---------QQ 94 (199)
T ss_dssp EEEEEEEETTTTEE--EEEEESSS-STTSBBCCEEECCTT-CCHHHHHHHHHHHHHCCCEEEEEEEEEE---------EC
T ss_pred eEEEEEEeCCCCEE--EEEEEcCC-CCCCEECCccccCCC-CCHHHHHHHHHHHHhCCccccceEEEEE---------ee
Confidence 5666666654 333 34444444 345799999999998 9999999999999999998643333322 23
Q ss_pred ecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhHH
Q 023875 196 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVL 257 (276)
Q Consensus 196 y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ktl 257 (276)
|..++.......+|++...... .....+++|..+++|++++++.++...+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~ 147 (199)
T 3h95_A 95 HTNPGAFGKSDMYIICRLKPYS---------FTINFCQEECLRCEWMDLNDLAKTENTTPIT 147 (199)
T ss_dssp C---------CEEEEEEEEESC---------CCCCCCTTTEEEEEEEEHHHHHHCSSBCHHH
T ss_pred ecCCCCceeEEEEEEEEEcCCC---------cccCCCccceeeeEEEeHHHHhhhhhcChHH
Confidence 5556554433344444432111 1123568899999999999999987644433
No 20
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.59 E-value=2.1e-14 Score=115.80 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=71.2
Q ss_pred EEEEEEecceeeeccCeeeeeCC--CCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceee
Q 023875 118 IGFLKFKADIFCKETGQKVRVPT--GRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 195 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~--g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~ 195 (276)
|++|... ++.+ .++++.+.+. ....|+||||++|+| |++.+||+||++||||+.+. ....++. ..
T Consensus 9 v~~vi~~-~~~v-LL~~r~~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EE~Gl~~~--~~~~~~~--------~~ 75 (140)
T 3gwy_A 9 VAAVIRL-GEKY-LCVQRGQTKFSYTSFRYEFPGGKVEEG-ESLQEALQREIMEEMDYVIE--VGEKLLT--------VH 75 (140)
T ss_dssp EEEEEEE-TTEE-EEEEC---------CCEECSEEECCTT-CCHHHHHHHHHHHHHCCCEE--EEEEEEE--------EE
T ss_pred EEEEEEe-CCEE-EEEEecCCCCCCCCCeEECCCccCCCC-CCHHHHHHHHHHHhhCcEEE--eceEEEE--------EE
Confidence 3444444 4444 4666666554 556899999999998 99999999999999999986 4445542 12
Q ss_pred ecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 196 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 196 y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+..+ .....+++|++.... + ..+.+|..++.|++++++.++..
T Consensus 76 ~~~~-~~~~~~~~f~~~~~~---------~----~~~~~E~~~~~W~~~~el~~~~~ 118 (140)
T 3gwy_A 76 HTYP-DFEITMHAFLCHPVG---------Q----RYVLKEHIAAQWLSTREMAILDW 118 (140)
T ss_dssp CCCS-SCCEEEEEEEEEECC---------S----CCCCCSSCEEEEECHHHHTTSCB
T ss_pred EEeC-CceEEEEEEEEEecC---------C----cccccccceeEeccHHHHhhCCC
Confidence 2222 345566777776431 1 23456888999999999988764
No 21
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.59 E-value=8.6e-15 Score=120.95 Aligned_cols=112 Identities=19% Similarity=0.136 Sum_probs=74.6
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
|++|.+. ++.+ .++++.|.+ ....|+||||++|+| |++.+||+||++||||+.+... ..++.+ ...+.
T Consensus 32 v~~vi~~-~~~v-LL~~r~~~~-~~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~~--~~~~~~------~~~~~ 99 (157)
T 4dyw_A 32 CGAAIVR-DGRI-LLIKRKRAP-EAGCWGLPGGKVDWL-EPVERAVCREIEEELGIALERA--TLLCVV------DHIDA 99 (157)
T ss_dssp EEEEEEE-TTEE-EEEEECSSS-STTCEECCEEECCTT-CCHHHHHHHHHHHHHSCEEESC--EEEEEE------EEEET
T ss_pred EEEEEEE-CCEE-EEEEecCCC-CCCEEECCcccCCCC-CCHHHHHHHHHHHHHCcccccC--cEEEEE------Eeecc
Confidence 4555555 4444 477766665 566899999999998 9999999999999999999743 334321 01222
Q ss_pred CCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
. .......++|++.... +... ..+++|..+++|++++++.+.+.
T Consensus 100 ~-~~~~~~~~~f~~~~~~---------~~~~-~~~~~E~~~~~W~~~~el~~~l~ 143 (157)
T 4dyw_A 100 A-NGEHWVAPVYLAHAFS---------GEPR-VVEPDRHEALGWFALDDLPQPLT 143 (157)
T ss_dssp T-TTEEEEEEEEEESEEE---------SCCC-CSCTTTEEEEEEEETTSCCSSBC
T ss_pred C-CCcEEEEEEEEEEEcC---------CCcc-cCCCCcEeEEEEECHHHcccccC
Confidence 1 2233344566664322 1111 23567899999999999988554
No 22
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.58 E-value=3.3e-14 Score=115.65 Aligned_cols=119 Identities=16% Similarity=0.070 Sum_probs=73.0
Q ss_pred CEEEEEEE---ecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCc
Q 023875 116 KRIGFLKF---KADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 192 (276)
Q Consensus 116 ~~V~vl~~---~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~ 192 (276)
.+|+++.+ +.++.+ .++++.+ . ..|++|||++|+| |++.+||+||++||||+.+... ...+..+.. ..
T Consensus 6 ~~v~vvi~~~~~~~~~v-Ll~~r~~--~--g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~--~~ 76 (149)
T 3son_A 6 FQVLVIPFIKTEANYQF-GVLHRTD--A--DVWQFVAGGGEDE-EAISETAKRESIEELNLDVDVK-MYSLDSHAS--IP 76 (149)
T ss_dssp CEEEEEEEEECSSSEEE-EEEEESS--S--SCEECEEEECCTT-CCHHHHHHHHHHHHHTCCSCCC-EEEEEEEEE--EE
T ss_pred eEEEEEEEEecCCCeEE-EEEEEcC--C--CCEeCCccccCCC-CCHHHHHHHHHHHHhCCCcccc-eEEEEeeec--cc
Confidence 35656655 333343 3554322 2 5799999999998 9999999999999999998742 112211000 00
Q ss_pred eeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCC
Q 023875 193 CKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 253 (276)
Q Consensus 193 ~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d 253 (276)
...|..++......++|++....... . ....+|..+++|++++++.+++..
T Consensus 77 ~~~~~~~~~~~~~~~~f~~~~~~~~~-------~---~~~~~E~~~~~W~~~~el~~~~~~ 127 (149)
T 3son_A 77 NFHFSFNKPYVVPEYCFAIDLTSCSY-------Q---VTLSLEHSELRWVSYESAIQLLEW 127 (149)
T ss_dssp GGGTCSSSCSEEEEEEEEEECTTTGG-------G---CCCCTTEEEEEEECHHHHHHHCCC
T ss_pred ceeeccCCceEeEEEEEEEEcCCCCC-------c---ccCCCceeeEEEeCHHHHHHHhcC
Confidence 00222244444556677775431111 1 112578999999999999998763
No 23
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.58 E-value=2.1e-14 Score=120.46 Aligned_cols=120 Identities=21% Similarity=0.207 Sum_probs=82.5
Q ss_pred EEEEEEEecceeeeccCeeeeeCCCC---eEEEe-ceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCc
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTGR---VILEL-PAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTG 192 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g~---~~wEl-PaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~ 192 (276)
.++++.++.++.+ .+ +.|.+.+. ..|+| |||++|+| |++.+||+||++||||+.+. .+..++.
T Consensus 39 ~~~v~i~~~~~~v-Ll--~~R~~~~~~~~g~w~l~pGG~ve~g-E~~~~aa~REl~EEtGl~~~--~~~~l~~------- 105 (180)
T 2fkb_A 39 ATYIVVHDGMGKI-LV--QRRTETKDFLPGMLDATAGGVVQAD-EQLLESARREAEEELGIAGV--PFAEHGQ------- 105 (180)
T ss_dssp EEEEEEECSSSCE-EE--EEECSSCSSSTTCEESSBCCBCBTT-CCHHHHHHHHHHHHHCCBSC--CCEEEEE-------
T ss_pred EEEEEEECCCCEE-EE--EECCCCCccCCCcEEeecCCCCCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEEE-------
Confidence 4566666666554 23 45765443 47999 99999998 99999999999999999886 4666653
Q ss_pred eeeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC--ChhHHHHHHHH
Q 023875 193 CKFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP--DAKVLTAIALY 263 (276)
Q Consensus 193 ~~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~--d~ktl~al~l~ 263 (276)
++...+.....+++|++.. . +.. ..+++|..++.|++++++.+++. ......++..|
T Consensus 106 --~~~~~~~~~~~~~~f~~~~--~--------~~~--~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~ 164 (180)
T 2fkb_A 106 --FYFEDKNCRVWGALFSCVS--H--------GPF--ALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALW 164 (180)
T ss_dssp --EEEEETTEEEEEEEEEEEC--C--------CCC--CCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHH
T ss_pred --EEecCCCceEEEEEEEEec--C--------CCc--CCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHH
Confidence 3333444556677777752 1 111 24678999999999999999753 34444444433
No 24
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.57 E-value=4.1e-15 Score=135.04 Aligned_cols=113 Identities=20% Similarity=0.212 Sum_probs=75.8
Q ss_pred EEEEEEEecc-eeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceee
Q 023875 117 RIGFLKFKAD-IFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 195 (276)
Q Consensus 117 ~V~vl~~~~d-~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~ 195 (276)
.+++|.+..+ +.+ .+++++|.+ ..|++|||++|+| |++.+||+||++||||+++. .+..+. .
T Consensus 103 ~v~avv~~~~~~~v-LLv~r~~~~---g~W~lPgG~ve~g-Es~~eAA~REl~EEtGl~~~--~l~~~~----------~ 165 (271)
T 2a6t_A 103 VRGAIMLDMSMQQC-VLVKGWKAS---SGWGFPKGKIDKD-ESDVDCAIREVYEETGFDCS--SRINPN----------E 165 (271)
T ss_dssp EEEEEEBCSSSSEE-EEEEESSTT---CCCBCSEEECCTT-CCHHHHHHHHHHHHHCCCCT--TTCCTT----------C
T ss_pred eEEEEEEECCCCEE-EEEEEeCCC---CeEECCcccCCCC-cCHHHHHHHHHHHHhCCCce--eeeeee----------e
Confidence 4566666652 444 477776643 4699999999998 99999999999999999997 344332 4
Q ss_pred ecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCCh
Q 023875 196 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 254 (276)
Q Consensus 196 y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ 254 (276)
|.+++..++.+++|++...... +. ....+++|..+++|++++++.++..++
T Consensus 166 ~~~~~~~~~~~~~f~~~~~~~~-------~~-~~~~~~~E~~~~~W~~~~el~~~~~~~ 216 (271)
T 2a6t_A 166 FIDMTIRGQNVRLYIIPGISLD-------TR-FESRTRKEISKIEWHNLMDLPTFKKNK 216 (271)
T ss_dssp EEEEEETTEEEEEEEECCCCTT-------CC-CC------EEEEEEEEGGGSTTCC---
T ss_pred eccCCcCCceEEEEEEEEecCc-------cc-CCCCCccceeEEEEEEHHHHHHHHhcC
Confidence 5555666778888887643211 11 112367899999999999998876543
No 25
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.57 E-value=1.9e-14 Score=114.22 Aligned_cols=107 Identities=20% Similarity=0.212 Sum_probs=72.6
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
|+++.+..+ .+ .++++.+ ..|++|||++|+| |++.+||+||++||||+.+. ....++.+ ...++
T Consensus 7 ~~~vi~~~~-~v-Ll~~r~~-----~~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~--~~~~~~~~------~~~~~ 70 (134)
T 2pbt_A 7 AGGVLFKDG-EV-LLIKTPS-----NVWSFPKGNIEPG-EKPEETAVREVWEETGVKGE--ILDYIGEI------HYWYT 70 (134)
T ss_dssp EEEEEEETT-EE-EEEECTT-----SCEECCEEECCTT-CCHHHHHHHHHHHHHSEEEE--EEEEEEEE------EEEEE
T ss_pred EEEEEEECC-EE-EEEEeCC-----CcEECCccccCCC-CCHHHHHHHHHHHHHCCccE--EeeeeeEE------EEEee
Confidence 555556644 33 3555333 5799999999998 99999999999999999986 34444421 12454
Q ss_pred CCCc-cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGG-CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~-~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
++|. ....+++|++..... . ....+|..++.|++++++.+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~---------~---~~~~~e~~~~~W~~~~el~~~~~ 114 (134)
T 2pbt_A 71 LKGERIFKTVKYYLMKYKEG---------E---PRPSWEVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp ETTEEEEEEEEEEEEEEEEE---------C---CCCCTTSSEEEEEEHHHHHHHCC
T ss_pred CCCcEEEEEEEEEEEEecCC---------C---cCCCcceeEEEEEcHHHHHhhhc
Confidence 4443 345566777764321 1 11223889999999999999876
No 26
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.57 E-value=4.2e-14 Score=111.32 Aligned_cols=108 Identities=19% Similarity=0.114 Sum_probs=75.2
Q ss_pred EEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeee
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFF 196 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y 196 (276)
+++++.++.++.+ .++++.+ ..|++|||++|+| |++.+||+||++||||+.+. ....++. ..|
T Consensus 4 ~~~~vi~~~~~~v-Ll~~r~~-----g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~--~~~~~~~--------~~~ 66 (126)
T 1vcd_A 4 GAGGVVFNAKREV-LLLRDRM-----GFWVFPKGHPEPG-ESLEEAAVREVWEETGVRAE--VLLPLYP--------TRY 66 (126)
T ss_dssp EEEEEEECTTSCE-EEEECTT-----SCEECCEECCCTT-CCHHHHHHHHHHHHHCCEEE--EEEEEEE--------EEE
T ss_pred EEEEEEEcCCCEE-EEEEECC-----CCccCCcCcCCCC-CCHHHHHHHHHHHhhCcEee--eccEEeE--------EEE
Confidence 3566677666544 3555322 3699999999998 99999999999999999986 4444543 124
Q ss_pred cCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCCh
Q 023875 197 PSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 254 (276)
Q Consensus 197 ~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ 254 (276)
..++. ...+++|++.... +. ..+++|..+++|++++++.+++...
T Consensus 67 ~~~~~-~~~~~~~~~~~~~---------~~---~~~~~e~~~~~w~~~~el~~~~~~~ 111 (126)
T 1vcd_A 67 VNPKG-VEREVHWFLMRGE---------GA---PRLEEGMTGAGWFSPEEARALLAFP 111 (126)
T ss_dssp ECTTS-CEEEEEEEEEEEE---------SC---CCCCTTCCEEEEECHHHHHHHBCSH
T ss_pred ecCCc-eEEEEEEEEEEcC---------CC---CCCCcceeeeEEcCHHHHHHhhcCh
Confidence 44433 4556777765321 11 2356788999999999999987643
No 27
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.57 E-value=1.5e-14 Score=120.40 Aligned_cols=121 Identities=10% Similarity=0.088 Sum_probs=81.8
Q ss_pred EEEEEEEecceeeeccCee-eeeCCCCeEEE-eceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCcee
Q 023875 117 RIGFLKFKADIFCKETGQK-VRVPTGRVILE-LPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCK 194 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq-~R~~~g~~~wE-lPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~ 194 (276)
.|+++.++.++.+ .+.+. .+.......|+ +|||++|+| |++.+||+||++||||+.+....+..++.+
T Consensus 36 ~v~v~i~~~~~~v-Ll~~r~~~~~~~~g~w~~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~~~l~~~~~~-------- 105 (171)
T 1q27_A 36 VVNAFLRNSQGQL-WIPRRSPSKSLFPNALDVSVGGAVQSG-ETYEEAFRREAREELNVEIDALSWRPLASF-------- 105 (171)
T ss_dssp EEEEEEEETTTEE-EECCSCCSSSCCCCSCCCSEEEECSSS-SCHHHHHHHHHHHHHSCTTSSSCEEEEEEE--------
T ss_pred EEEEEEECCCCeE-EEEEecCCCCCCCCccccccCccccCC-CCHHHHHHHHHHHHHCCcccccceEEEEEE--------
Confidence 4566666666655 34441 22222245799 999999998 999999999999999999976556777641
Q ss_pred e-ecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC-----ChhHHHHHH
Q 023875 195 F-FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP-----DAKVLTAIA 261 (276)
Q Consensus 195 ~-y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~-----d~ktl~al~ 261 (276)
. |..++ ...+++|++.. . +.. ..+++|..+++|++++++.+++. +.+++.++.
T Consensus 106 ~~~~~~~--~~~~~~f~~~~--~--------~~~--~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~ 164 (171)
T 1q27_A 106 SPFQTTL--SSFMCVYELRS--D--------ATP--IFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVR 164 (171)
T ss_dssp CSSSSCC--SSEEEEEEEEC--C--------CCC--CSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred eccCCCC--ccEEEEEEEEE--C--------Ccc--ccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHH
Confidence 2 33332 23677777754 2 111 23567888999999999987643 556655553
No 28
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.56 E-value=5.6e-14 Score=114.92 Aligned_cols=110 Identities=18% Similarity=0.035 Sum_probs=73.6
Q ss_pred EEEEEEEecceeeeccCeeeee-CCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceee
Q 023875 117 RIGFLKFKADIFCKETGQKVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 195 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~-~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~ 195 (276)
+|+++.++.++.+ .+++..+. +.....|+||||.+|+| |++.+||+||++||||+.+... ..++. ..
T Consensus 10 ~v~~vi~~~~~~v-LL~~r~~~~~~~~g~w~~PgG~ve~g-E~~~~aa~REl~EE~Gl~~~~~--~~~~~--------~~ 77 (153)
T 3grn_A 10 SVYALIRNEKGEF-LLLRRSENSRTNAGKWDLPGGKVNPD-ESLKEGVAREVWEETGITMVPG--DIAGQ--------VN 77 (153)
T ss_dssp EEEEEEECTTCCE-EEEEECTTCSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCCCCCC--SEEEE--------EE
T ss_pred EEEEEEEcCCCcE-EEEEEcCCCCCCCCeEECceeecCCC-CCHHHHHHhhhhhhhCcEeecc--eEEEE--------EE
Confidence 3555666655554 35554433 34556899999999998 9999999999999999999743 33432 12
Q ss_pred ecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhc
Q 023875 196 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTT 251 (276)
Q Consensus 196 y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i 251 (276)
+..++ ....+++|++.... +. ....+|..+++|++++++.++.
T Consensus 78 ~~~~~-~~~~~~~~~~~~~~---------~~---~~~~~e~~~~~W~~~~el~~~~ 120 (153)
T 3grn_A 78 FELTE-KKVIAIVFDGGYVV---------AD---VKLSYEHIEYSWVSLEKILGME 120 (153)
T ss_dssp EECSS-CEEEEEEEEEEECC---------CC---CCCCTTEEEEEEECHHHHTTCS
T ss_pred EecCC-ceEEEEEEEEEecC---------Cc---EecCCCcceEEEEEHHHhhhcc
Confidence 22222 33445566665421 11 1234788999999999999876
No 29
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.56 E-value=6.4e-14 Score=111.96 Aligned_cols=91 Identities=15% Similarity=0.159 Sum_probs=63.9
Q ss_pred CCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCccccccee--eeccccCCCCceeeecCCCccCeEEEEEEEEEeehhh
Q 023875 141 GRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMI--DLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKE 218 (276)
Q Consensus 141 g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~--~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~ 218 (276)
+...|++|||++|+| |++.+||+||++||||+.+....+. .++. ..|..++ ....+++|++.....
T Consensus 28 ~~~~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~f~~~~~~~-- 95 (138)
T 1ktg_A 28 PPHHWTPPKGHVDPG-EDEWQAAIRETKEEANITKEQLTIHEDCHET--------LFYEAKG-KPKSVKYWLAKLNNP-- 95 (138)
T ss_dssp TTCCEESSEEECCTT-CCHHHHHHHHHHHHHCCCGGGEEEEEEEEEE--------EEEEETT-EEEEEEEEEEEECSC--
T ss_pred CCCcEeCCccccCCC-CCHHHHHHHHHHHHHCCCccceEEeccccce--------EEEEeCC-CceEEEEEEEEecCC--
Confidence 445899999999998 9999999999999999976522222 1221 1233332 345666777764311
Q ss_pred HHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 219 IIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 219 ~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.. ..+++|..++.|++++++.+++.
T Consensus 96 -------~~--~~~~~e~~~~~W~~~~el~~~~~ 120 (138)
T 1ktg_A 96 -------DD--VQLSHEHQNWKWCELEDAIKIAD 120 (138)
T ss_dssp -------CC--CCCCTTEEEEEEECHHHHHHHHC
T ss_pred -------cc--cCCCchhcEeEeccHHHHHHhhc
Confidence 11 34678899999999999999875
No 30
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.56 E-value=8.3e-14 Score=114.60 Aligned_cols=94 Identities=20% Similarity=0.172 Sum_probs=62.1
Q ss_pred CCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHH
Q 023875 141 GRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEII 220 (276)
Q Consensus 141 g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i 220 (276)
+...|+||||++|+| |++.+||+||++||||+.+.. ...+..+.. ...|. .......+.+|++......
T Consensus 34 ~~~~W~lPgG~ve~g-Et~~~aa~REl~EEtGl~~~~--~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~--- 102 (155)
T 3u53_A 34 GIHHWTPPKGHVEPG-EDDLETALRETQEEAGIEAGQ--LTIIEGFKR----ELNYV-ARNKPKTVIYWLAEVKDYD--- 102 (155)
T ss_dssp SSCCEECSEEECCSS-CCHHHHHHHHHHHHHCCCGGG--EEEEEEEEE----EEEEE-ETTEEEEEEEEEEEESCTT---
T ss_pred CCCCEECCeeeccCC-CCHHHHHHHHHHHHHCCcccc--ceeeeeEee----eeecC-CCcceeEEEEEEEEEeccC---
Confidence 345699999999998 999999999999999999873 333321100 01122 2222334455555443211
Q ss_pred HHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 221 MQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 221 ~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+ .....+|..+++|++++|+.+++.
T Consensus 103 ----~---~~~~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 103 ----V---EIRLSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp ----C---CCCCCTTEEEEEEECHHHHHHHHC
T ss_pred ----C---ccCCCcceeEEEEeEHHHHHHHcC
Confidence 1 133567899999999999998876
No 31
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.55 E-value=2e-14 Score=122.51 Aligned_cols=113 Identities=17% Similarity=0.115 Sum_probs=74.8
Q ss_pred EEEEEEEecce--eeeccCeeeee-CCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCce
Q 023875 117 RIGFLKFKADI--FCKETGQKVRV-PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGC 193 (276)
Q Consensus 117 ~V~vl~~~~d~--~~~~~~rq~R~-~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~ 193 (276)
+++++.+..++ .+ .++++.+. ......|+||||++|+| |++.+||+||++||||+++. .+..++.
T Consensus 36 ~~~~v~i~~~~~~~v-LL~~r~~~~~~~~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~~-------- 103 (194)
T 1nqz_A 36 AAVLVALTREADPRV-LLTVRSSELPTHKGQIAFPGGSLDAG-ETPTQAALREAQEEVALDPA--AVTLLGE-------- 103 (194)
T ss_dssp EEEEEEEESSSSCBB-CEEEEC------CCCEECSEEECCTT-CCHHHHHHHHHHHHHCCCGG--GCEEEEE--------
T ss_pred EEEEEEEecCCCeEE-EEEEecCCCCCCCCeEECCcccCCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEEE--------
Confidence 44555556555 43 35554321 23445799999999998 99999999999999999986 5556653
Q ss_pred eeecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhH-hhhc
Q 023875 194 KFFPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYREL-WRTT 251 (276)
Q Consensus 194 ~~y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel-~~~i 251 (276)
+....+..+..+++|++...... . ....+++|..++.|++++++ .+..
T Consensus 104 -~~~~~~~~~~~~~~f~~~~~~~~--------~-~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 104 -LDDVFTPVGFHVTPVLGRIAPEA--------L-DTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp -CCCEEETTTEEEEEEEEEECGGG--------G-GGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred -ccCccCCCCeEEEEEEEEecCCc--------c-ccCCCccceeEEEEEEHHHhccCCC
Confidence 22222234567888887643111 0 01347789999999999999 6643
No 32
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.55 E-value=2.2e-14 Score=118.72 Aligned_cols=117 Identities=15% Similarity=0.033 Sum_probs=63.9
Q ss_pred EEecceeeeccCe-eeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCC
Q 023875 122 KFKADIFCKETGQ-KVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAG 200 (276)
Q Consensus 122 ~~~~d~~~~~~~r-q~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg 200 (276)
.+..++.+ .+++ +.+.......|++|||++|+| |++.+||+||++||||+.+....+..+... . ......|+...
T Consensus 34 ii~~~~~v-LL~~r~~~~~~~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~~~~-~-~~~~~~~~~~~ 109 (165)
T 3oga_A 34 LIQNDGCY-LLCKMADNRGVFPGQWALSGGGVEPG-ERIEEALRREIREELGEQLILSDITPWTFR-D-DIRIKTYADGR 109 (165)
T ss_dssp EEEETTEE-EEEEECC------CCEECCCEECCTT-CCHHHHHHHHHHHHHCSSCCEEEEEEEEEE-E-EEEEEEC--CC
T ss_pred EEeCCCEE-EEEEecCCCCCCCCeEECCccccCCC-CCHHHHHHHHHHHHhCCCccccceeeeeee-c-ceeeEecCCCC
Confidence 34444444 3443 223333446899999999998 999999999999999999864444332100 0 00001233222
Q ss_pred ccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 201 GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 201 ~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.....+.++++...... +. ....+|..+++|++++++.++..
T Consensus 110 ~~~~~~~~~~~~~~~~~-------~~---~~~~~E~~~~~W~~~~el~~~~~ 151 (165)
T 3oga_A 110 QEEIYMIYLIFDCVSAN-------RD---ICINDEFQDYAWVKPEELALYDL 151 (165)
T ss_dssp EEEEEEEEEEEEEEESC-------CC---CCCCTTEEEEEEECGGGGGGSCB
T ss_pred ceeEEEEEEEEEeeccC-------CC---ccCCchheeeEEccHHHHhhCCC
Confidence 21122222222221111 11 22357889999999999998754
No 33
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.54 E-value=5.2e-14 Score=113.24 Aligned_cols=111 Identities=17% Similarity=0.108 Sum_probs=72.9
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
++++.+..++.+ .+.+..+.......|+||||.+|.| |++.+||+||++||||+.+...++..+.. ..+.
T Consensus 11 ~~~vi~~~~~~v-Ll~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~~~~~~~~~--------~~~~ 80 (144)
T 3r03_A 11 TAAALIDPDGRV-LLAQRPPGKSLAGLWEFPGGKLEPG-ETPEAALVRELAEELGVDTRASCLAPLAF--------ASHS 80 (144)
T ss_dssp EEEEEBCTTSCE-EEEECCTTSSSTTCEECSEEECCTT-CCHHHHHHHHHHHHHCCBCCGGGCEEEEE--------EEEE
T ss_pred EEEEEEcCCCEE-EEEEeCCCCCCCCcEECCCcEecCC-CCHHHHHHHHHHHHhCceeeccceEEEEe--------eecc
Confidence 344445545444 3555333333446899999999998 99999999999999999997655555542 1222
Q ss_pred CCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
. ......+++|++... . + .....|..+++|++++++.++..
T Consensus 81 ~-~~~~~~~~~~~~~~~--~-------~----~~~~~e~~~~~W~~~~el~~~~~ 121 (144)
T 3r03_A 81 Y-DTFHLLMPLYACRSW--R-------G----RATAREGQTLAWVRAERLREYPM 121 (144)
T ss_dssp C-SSSEEEEEEEEECCC--B-------S----CCCCCSSCEEEEECGGGGGGSCC
T ss_pred C-CCeEEEEEEEEEEec--C-------C----ccCCCCcceEEEEeHHHhccCCC
Confidence 2 223344555655422 1 1 23467788999999999988754
No 34
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.53 E-value=5.8e-14 Score=112.28 Aligned_cols=102 Identities=16% Similarity=0.038 Sum_probs=68.2
Q ss_pred cceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCe
Q 023875 125 ADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDE 204 (276)
Q Consensus 125 ~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e 204 (276)
.++.+ .+.++.+.+.....|+||+|.+|.| |++.+||+||++||||+.+. .+..++. ..+..++ ...
T Consensus 18 ~~~~v-Ll~~r~~~~~~~g~w~lPgG~ve~g-E~~~~aa~RE~~EE~Gl~~~--~~~~~~~--------~~~~~~~-~~~ 84 (140)
T 2rrk_A 18 RDGKI-LLAQRPAQSDQAGLWEFAGGKVEPD-ESQRQALVRELREELGIEAT--VGEYVAS--------HQREVSG-RII 84 (140)
T ss_dssp ETTEE-EEEECCSSCSCCCCEECCEEECCTT-SCHHHHHHHHHHHHSCEEEE--CCEEEEE--------EEEEETT-EEE
T ss_pred cCCEE-EEEEcCCCCCCCCEEECCceecCCC-CCHHHHHHHHHHHHHCCeee--cccEEEE--------EEEecCC-cEE
Confidence 34443 3555444444456899999999998 99999999999999999986 3444442 1222233 234
Q ss_pred EEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 205 EISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 205 ~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.+++|++.... + ....+|..++.|++++++.++..
T Consensus 85 ~~~~~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 119 (140)
T 2rrk_A 85 HLHAWHVPDFH---------G----TLQAHEHQALVWCSPEEALQYPL 119 (140)
T ss_dssp EEEEEEESEEE---------E----CCCCSSCSCEEEECHHHHTTSCC
T ss_pred EEEEEEEEeeC---------C----CcCCCccceeEEeCHHHHhhCCC
Confidence 55666654321 1 12345677899999999998765
No 35
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.52 E-value=1.4e-14 Score=118.97 Aligned_cols=115 Identities=17% Similarity=0.057 Sum_probs=66.4
Q ss_pred EEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeee
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFF 196 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y 196 (276)
+|+++.++.++.+ .+. .|. ...|+||||++|+| |++.+||+||++||||+.+. .+..++.+.. ......|
T Consensus 23 ~v~~ii~~~~~~v-LL~--~r~---~~~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~~~~~~~-~~~~~~~ 92 (153)
T 3eds_A 23 SVAAVIKNEQGEI-LFQ--YPG---GEYWSLPAGAIELG-ETPEEAVVREVWEETGLKVQ--VKKQKGVFGG-KEYRYTY 92 (153)
T ss_dssp EEEEEEBCTTCCE-EEE--CC------CBBCSEEECCTT-SCHHHHHHHHHHHHHCEEEE--EEEEEEEECS-GGGEEEC
T ss_pred eEEEEEEcCCCeE-EEE--EcC---CCcEECCccccCCC-CCHHHHHHHHHHHHHCccce--eeeEEEEecc-cceeeec
Confidence 3555656655554 243 344 45799999999998 99999999999999999997 3444432100 0001122
Q ss_pred cCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 197 PSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 197 ~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+........+.+|++.... +.. ..+++|..+++|++++++.++..
T Consensus 93 ~~~~~~~~~~~~f~~~~~~---------~~~--~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 93 SNGDEVEYIVVVFECEVTS---------GEL--RSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp TTSCEEEEEEEEEEEEEEE---------ECC--C-------CEEEECGGGCCCBSS
T ss_pred CCCCeEEEEEEEEEEEecC---------Ccc--ccCCCcEEEEEEECHHHCchhcc
Confidence 3222223355667665432 111 23567889999999999998764
No 36
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.52 E-value=1e-13 Score=113.42 Aligned_cols=115 Identities=16% Similarity=0.178 Sum_probs=73.8
Q ss_pred EEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeee
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFF 196 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y 196 (276)
+|+++.++.++.+ .+.++.+.+ ....|+||||++|+| |++.+||+||++||||+.+....+..++.. ...|
T Consensus 20 ~v~~vi~~~~~~v-Ll~~r~~~~-~~g~w~~PgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~~~~------~~~~ 90 (160)
T 1rya_A 20 SLDFIVENSRGEF-LLGKRTNRP-AQGYWFVPGGRVQKD-ETLEAAFERLTMAELGLRLPITAGQFYGVW------QHFY 90 (160)
T ss_dssp EEEEEEECTTSCE-EEEEECSSS-STTSEECCEEECCTT-CCHHHHHHHHHHHHHSSCCCGGGSEEEEEE------EEEE
T ss_pred EEEEEEEcCCCEE-EEEeccCCC-CCCEEECCccccCCC-CCHHHHHHHHHHHHHCCCCCcccceEEEEE------eEEE
Confidence 3555666545554 355544433 345799999999998 999999999999999999743345555431 1233
Q ss_pred cCC--C---ccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhc
Q 023875 197 PSA--G---GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTT 251 (276)
Q Consensus 197 ~sp--g---~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i 251 (276)
+.. | .....+++|.+... . . .. ..+.+|..+++|++++++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~f~~~~~-~-~-------~~--~~~~~e~~~~~W~~~~el~~~~ 139 (160)
T 1rya_A 91 DDNFSGTDFTTHYVVLGFRFRVS-E-E-------EL--LLPDEQHDDYRWLTSDALLASD 139 (160)
T ss_dssp SSBTTBSSSCEEEEEEEEEEECC-G-G-------GC--CCCSSSEEEEEEECHHHHHHCT
T ss_pred cccccCCCcCcEEEEEEEEEEcC-c-c-------cc--ccCCCccceEEEecHHHHhhcc
Confidence 322 1 11334556666532 1 1 11 2356788999999999998753
No 37
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.52 E-value=6.1e-14 Score=116.72 Aligned_cols=111 Identities=20% Similarity=0.223 Sum_probs=68.1
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
|++|.+..+ .+ .++++.| +...|+||||++|+| |++.+||+||++||||+.+.. ...++ .+.
T Consensus 26 v~~ii~~~~-~v-LL~~r~~---~~~~w~~PgG~ve~g-Es~~~aa~REl~EEtGl~~~~--~~~~~----------~~~ 87 (171)
T 3id9_A 26 VTGILIEDE-KV-LLVKQKV---ANRDWSLPGGRVENG-ETLEEAMIREMREETGLEVKI--KKLLY----------VCD 87 (171)
T ss_dssp EEEEEEETT-EE-EEEECSS---TTCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCEEE--EEEEE----------EEE
T ss_pred EEEEEEECC-EE-EEEEEEC---CCCeEECCCccCCCC-CCHHHHHHHHHHHHHCCcccc--ceEEE----------EEc
Confidence 444555543 33 3666555 255799999999998 999999999999999999863 23332 333
Q ss_pred CCCccCeEEE-EEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGGCDEEIS-LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~~~e~i~-lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.++......+ +|++... ... +. .. ....+++|..+++|++++++.++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~-~~~-~~---~~-~~~~~~~E~~~~~w~~~~el~~~~~ 137 (171)
T 3id9_A 88 KPDASPSLLHITFLLERI-EGE-IT---LP-SNEFDHNPIHDVQMVPINELSYYGF 137 (171)
T ss_dssp ETTSSSCEEEEEEEEEEC-------------------CCCCCEEEEETGGGGGGTC
T ss_pred ccCCCCcEEEEEEEEEEc-CCc-cc---CC-ccCCCcCeeeeEEEEeHHHHhhCCC
Confidence 3444333333 4544432 211 10 00 0123668889999999999998754
No 38
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.51 E-value=7.6e-14 Score=114.69 Aligned_cols=111 Identities=16% Similarity=0.188 Sum_probs=72.9
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
++++.+..++.+ .+++..+.......|+||+|.+|+| |++.+||+||++||||+.+...++..++. ..+.
T Consensus 32 ~~~~i~~~~~~v-LL~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~~--------~~~~ 101 (158)
T 3hhj_A 32 VACALLDQDNRV-LLTQRPEGKSLAGLWEFPGGKVEQG-ETPEASLIRELEEELGVHVQADNLFPLTF--------ASHG 101 (158)
T ss_dssp EEEEEBCTTSEE-EEEECCCTTSCCCCCBCCEEECCTT-CCHHHHHHHHHHHHHCCBCCGGGCEEEEE--------EEEE
T ss_pred EEEEEEeCCCEE-EEEEeCCCCCCCCEEECCceeecCC-CCHHHHHHHHHHHHhCcEeecceEEEEEE--------Eeec
Confidence 334444545544 3555333333456899999999998 99999999999999999997655555542 1222
Q ss_pred CCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.++ ....+++|++... . + ..+..|..++.|++++++.++..
T Consensus 102 ~~~-~~~~~~~~~~~~~--~-------~----~~~~~e~~~~~W~~~~el~~~~~ 142 (158)
T 3hhj_A 102 YET-FHLLMPLYFCSHY--K-------G----VAQGREGQNLKWIFINDLDKYPM 142 (158)
T ss_dssp CSS-CEEEEEEEEESCC--B-------S----CCCCTTSCEEEEEEGGGGGGSCC
T ss_pred cCC-cEEEEEEEEEEEC--C-------C----ccCCccccceEEEcHHHHhhCCC
Confidence 222 2334455555321 1 1 23567788999999999988654
No 39
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.51 E-value=9.6e-14 Score=117.92 Aligned_cols=98 Identities=16% Similarity=0.120 Sum_probs=64.0
Q ss_pred ccCeeeee------CCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCcc--
Q 023875 131 ETGQKVRV------PTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC-- 202 (276)
Q Consensus 131 ~~~rq~R~------~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~-- 202 (276)
.++++.|+ ......|++|||++|+| |++.+||+||++||||+.+. .+..++ .|..+...
T Consensus 49 LL~~r~~~~~~g~~~~~~g~w~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~----------~~~~~~~~~~ 115 (187)
T 3i9x_A 49 LLIKRSLTNAEGKPNMEGGKWAVPGGFVDEN-ESAEQAAERELEEETSLTDI--PLIPFG----------VFDKPGRDPR 115 (187)
T ss_dssp EEEECCSBCTTSSBCTTTTCEECSEEECCTT-SCHHHHHHHHHHHHHCCCSC--CCEEEE----------EECCTTSSTT
T ss_pred EEEEEccccccccCCCCCCEEECCceeCCCC-CCHHHHHHHHHHHHHCCCCc--ceEEEE----------EEcCCccCCC
Confidence 46665442 34556899999999998 99999999999999999886 455554 33333321
Q ss_pred -CeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhh
Q 023875 203 -DEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT 250 (276)
Q Consensus 203 -~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~ 250 (276)
.....+|++........ . ....+|..+++|++++++.++
T Consensus 116 ~~~~~~~~~~~~~~~~~~--~-------~~~~~E~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 116 GWIISRAFYAIVPPEALE--K-------RAAGDDAAEIGLFPMTEALEL 155 (187)
T ss_dssp SSEEEEEEEEECCHHHHH--H-------HHHSTTTTTEEEEEHHHHTTS
T ss_pred CCEEEEEEEEEEcCcccC--C-------cCCCCceeEEEEEeHHHcccC
Confidence 12334454433211110 0 123456667999999999864
No 40
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.51 E-value=1.4e-14 Score=127.41 Aligned_cols=122 Identities=17% Similarity=0.151 Sum_probs=73.4
Q ss_pred CeEEEeceeecCCCCC-CHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEE-EEEEEEEeehhhH
Q 023875 142 RVILELPAGMLDDDKG-DFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEI-SLFLYRGRVDKEI 219 (276)
Q Consensus 142 ~~~wElPaG~vD~G~E-s~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i-~lfla~~~~~~~~ 219 (276)
...|+||||++|+| | ++++||+||++||||+.+....+..+. .++..++.....+ ++|++. .. ...
T Consensus 74 ~g~w~lPGG~ve~g-E~t~~eaa~REl~EEtGl~~~~~~l~~l~---------~~~~~~~~~~~~~~~~f~~~-l~-~~~ 141 (217)
T 2xsq_A 74 DGRLGFPGGFVDTQ-DRSLEDGLNRELREELGEAAAAFRVERTD---------YRSSHVGSGPRVVAHFYAKR-LT-LEE 141 (217)
T ss_dssp TSCEECSEEECCTT-CSSHHHHHHHHHHHHHCGGGGGCCCCGGG---------EEEEEECSSSSEEEEEEEEE-CC-HHH
T ss_pred CCeEECCceecCCC-CCCHHHHHHHHHHHHHCCCCccceeEEEE---------EEeecCCCCCeEEEEEEEEE-ec-ccc
Confidence 35799999999998 9 999999999999999999743343333 2333344333444 445444 22 222
Q ss_pred HHHhcCCC-CCCCCCCceEEEEEEchhhHhhhcC-------ChhHH-HHHHHHHHHHhCCCCCCC
Q 023875 220 IMQLQGKE-TGLRDHGELIKVRVVPYRELWRTTP-------DAKVL-TAIALYEMASKEELLPSR 275 (276)
Q Consensus 220 i~~~~g~~-~g~~d~~E~i~v~wv~leel~~~i~-------d~ktl-~al~l~~~l~~~g~l~~~ 275 (276)
+....... ....++.|.+++.|+|++++.+... +..+. +-..+...+++.|.|++.
T Consensus 142 ~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~~P~~L~~~~l~~~~~~i~~~l~~~~~~~~~ 206 (217)
T 2xsq_A 142 LLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGLLQSG 206 (217)
T ss_dssp HHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBHHHHTTSCBCTTHHHHHHHHHHHTTTTC--
T ss_pred ceecccccccccccCCceeeEEEEEHHHhhhccccCcHHHHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 21111100 0123467899999999999873321 11111 123456778888988763
No 41
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.50 E-value=1.7e-14 Score=122.75 Aligned_cols=112 Identities=12% Similarity=0.036 Sum_probs=74.8
Q ss_pred EEEEEEEecceeeeccCeeeeeCC---CCeEEEe-ceeecCCCCCCHHHHHHHHHHHHhCCcccccce-eeeccccCCCC
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPT---GRVILEL-PAGMLDDDKGDFVGTAVREVEEETGIQLKLEDM-IDLTAFLYPST 191 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~---g~~~wEl-PaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l-~~L~~l~~~~~ 191 (276)
+|+++.+..++.+ .+.+ |... ....|++ |||++|+| |++.+||+||++||||+.+. .+ ..++.+.
T Consensus 34 ~v~~~i~~~~g~v-Ll~~--R~~~~~~~~g~w~~~PgG~ve~g-Et~~~aa~REl~EEtGl~~~--~~~~~~~~~~---- 103 (190)
T 1hzt_A 34 AFSSWLFNAKGQL-LVTR--RALSKKAWPGVWTNSVCGHPQLG-ESNEDAVIRRCRYELGVEIT--PPESIYPDFR---- 103 (190)
T ss_dssp CEEEEEECTTCCE-EEEE--ECTTCSSSTTCEEESEEECCCTT-CCHHHHHHHHHHHHHCCCBS--CCEEEETTCE----
T ss_pred EEEEEEEcCCCEE-EEEE--eCCCCCCCCCcccCcccccCCCC-CCHHHHHHHHHHHHHCCCch--hhheeeeeEE----
Confidence 4566666656554 3443 4322 2458999 99999998 99999999999999999997 45 5554320
Q ss_pred ceeeecCC-C-ccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 192 GCKFFPSA-G-GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 192 ~~~~y~sp-g-~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
..+..+ + .....+++|++.. . +.. ..+++|..+++|++++++.+++.
T Consensus 104 --~~~~~~~~~~~~~~~~~f~~~~--~--------~~~--~~~~~E~~~~~W~~~~el~~~~~ 152 (190)
T 1hzt_A 104 --YRATDPSGIVENEVCPVFAART--T--------SAL--QINDDEVMDYQWCDLADVLHGID 152 (190)
T ss_dssp --EEEECTTSCEEEEECCEEEEEB--C--------SCC--CCCTTTEEEEEEECHHHHHHHHH
T ss_pred --EEeeCCCCCcceEEEEEEEEec--C--------CCC--cCCccceeeEEEecHHHHHHHHH
Confidence 111222 2 2234556776653 1 111 23678999999999999998865
No 42
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.2e-14 Score=115.16 Aligned_cols=110 Identities=21% Similarity=0.253 Sum_probs=72.3
Q ss_pred EEEEEEEecc-eeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceee
Q 023875 117 RIGFLKFKAD-IFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 195 (276)
Q Consensus 117 ~V~vl~~~~d-~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~ 195 (276)
.++++.+..+ +.+ .+++ |.. ...|++|||++|+| |++.+||+||++||||+.+. .+..+.. +
T Consensus 6 ~~~~~i~~~~~~~v-Ll~~--r~~--~g~w~~PgG~ve~g-Es~~~aa~RE~~EEtGl~~~--~~~~~~~---------~ 68 (146)
T 2jvb_A 6 VRGAAIFNENLSKI-LLVQ--GTE--SDSWSFPRGKISKD-ENDIDCCIREVKEEIGFDLT--DYIDDNQ---------F 68 (146)
T ss_dssp CEEEEEBCTTSSEE-EEEC--CSS--SSCCBCCEECCCSS-SCHHHHHHHHHHHHTSCCCS--SSSCSSC---------E
T ss_pred EEEEEEEeCCCCEE-EEEE--EcC--CCcEECCcccCCCC-CCHHHHHHHHHHHHHCCCch--Hhccccc---------c
Confidence 3455555553 443 3554 332 34799999999998 99999999999999999986 4444432 2
Q ss_pred ecCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 196 FPSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 196 y~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+.. +..+...++|++....... . ....+++|..++.|++++++.+++.
T Consensus 69 ~~~-~~~~~~~~~~~~~~~~~~~------~--~~~~~~~E~~~~~W~~~~el~~~~~ 116 (146)
T 2jvb_A 69 IER-NIQGKNYKIFLISGVSEVF------N--FKPQVRNEIDKIEWFDFKKISKTMY 116 (146)
T ss_dssp EEE-EETTEEEEEEEECCCCSSS------C--CCCCCSSSCCCEEEEEHHHHHTGGG
T ss_pred ccc-ccCCceEEEEEEEeccccc------c--CCcCCcchhheeEEeEHHHHHhhhc
Confidence 222 2334556677664322110 0 1123477899999999999999875
No 43
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.50 E-value=1.2e-13 Score=111.33 Aligned_cols=120 Identities=15% Similarity=0.012 Sum_probs=73.0
Q ss_pred EEEEEEEecc-eeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCC---Cc
Q 023875 117 RIGFLKFKAD-IFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPS---TG 192 (276)
Q Consensus 117 ~V~vl~~~~d-~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~---~~ 192 (276)
+|+++.++.+ +.+ .+++..+. ...|++|||++|+| |++.+||+||++||||+.+...++..++...... ..
T Consensus 11 ~v~~~i~~~~~~~v-Ll~~r~~~---~g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 85 (150)
T 2o1c_A 11 SILVVIYAQDTKRV-LMLQRRDD---PDFWQSVTGSVEEG-ETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFS 85 (150)
T ss_dssp EEEEEEEETTTCEE-EEEECSSS---TTCEESEEEECCTT-CCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECCG
T ss_pred EEEEEEEeCCCCEE-EEEEecCC---CCceECCccccCCC-CCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeeec
Confidence 4566666653 444 34442221 34799999999998 9999999999999999998743333332100000 00
Q ss_pred eeeecCC-CccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCC
Q 023875 193 CKFFPSA-GGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 253 (276)
Q Consensus 193 ~~~y~sp-g~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d 253 (276)
...+..+ +.....+++|++.... +. ....+|..+++|++++++.++...
T Consensus 86 ~~~~~~~~~~~~~~~~~f~~~~~~---------~~---~~~~~E~~~~~W~~~~el~~~~~~ 135 (150)
T 2o1c_A 86 HLRHRYAPGVTRNTESWFCLALPH---------ER---QIVFTEHLAYKWLDAPAAAALTKS 135 (150)
T ss_dssp GGGGGBCTTCCEEEEEEEEEEESS---------CC---CCCCSSSSCEEEEEHHHHHHHCSC
T ss_pred ccccccCCCCcceEEEEEEEEcCC---------CC---CcChhHhhccEeecHHHHHhhhcC
Confidence 0001112 3334566777776431 11 123468889999999999998753
No 44
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.50 E-value=1.9e-13 Score=112.58 Aligned_cols=116 Identities=11% Similarity=0.028 Sum_probs=69.8
Q ss_pred EEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCC---CCce
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYP---STGC 193 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~---~~~~ 193 (276)
.|+++.+.. +.+ .++++.+ ...|+||||++|+| |++.+||+||++||||+.+.. +..++.+... ....
T Consensus 8 ~v~~vi~~~-~~v-LL~~r~~----~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~--~~~~~~~~~~~~~~~~~ 78 (159)
T 3f6a_A 8 TVSVFIVCK-DKV-LLHLHKK----AKKMLPLGGHIEVN-ELPEEACIREAKEEAGLNVTL--YNPIDINLKKSCDLSGE 78 (159)
T ss_dssp EEEEEEEET-TEE-EEEECSS----SCCEECEEEECCTT-CCHHHHHHHHHHHHHCCCCEE--CCCCCHHHHHHHHHTTC
T ss_pred EEEEEEEEC-CEE-EEEEcCC----CCeEECCccCccCC-CCHHHHHHHHHHHHhCCCcee--ccccccccccccccccc
Confidence 345555554 343 3565433 34699999999998 999999999999999999863 2333210000 0000
Q ss_pred eeecCCC---------ccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 194 KFFPSAG---------GCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 194 ~~y~spg---------~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
..++.|. .......+|++.... +.. ..+++|..+++|++++++.++..
T Consensus 79 ~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~---------~~~--~~~~~E~~~~~W~~~~el~~~~~ 135 (159)
T 3f6a_A 79 KLLINPIHTILGDVSPNHSHIDFVYYATTTS---------FET--SPEIGESKILKWYSKEDLKNAHN 135 (159)
T ss_dssp EEECCCSEEEEECSSSSSCEEEEEEEEECSC---------SCC--CCCTTSCCCEEEECSSSSTTCSS
T ss_pred ccccCccccccccCCCCceEEEEEEEEEeCC---------CCc--CCCCCcccceEEeeHHHHhhCcC
Confidence 1222222 112333556665321 111 23578899999999999998863
No 45
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.50 E-value=2e-13 Score=110.15 Aligned_cols=118 Identities=15% Similarity=-0.008 Sum_probs=74.3
Q ss_pred EEEEEEEec-ceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceee
Q 023875 117 RIGFLKFKA-DIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKF 195 (276)
Q Consensus 117 ~V~vl~~~~-d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~ 195 (276)
.++++.+.. ++.+ .+.+ |. . ..|+||||++|+| |++.+||+||++||||+.+. ....++... ...
T Consensus 20 ~~~~vi~~~~~~~v-Ll~~--r~-~--g~w~~PgG~ve~g-E~~~~aa~RE~~EEtGl~~~--~~~~~~~~~-----~~~ 85 (148)
T 2azw_A 20 AAYIIVSKPENNTM-VLVQ--AP-N--GAYFLPGGEIEGT-ETKEEAIHREVLEELGISVE--IGCYLGEAD-----EYF 85 (148)
T ss_dssp EEEEECEEGGGTEE-EEEE--CT-T--SCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEE--EEEEEEEEE-----EEE
T ss_pred EEEEEEECCCCCeE-EEEE--cC-C--CCEeCCCcccCCC-CCHHHHHHHHHHHHhCCeeE--eeeEEEEEE-----EEE
Confidence 454455554 3443 3554 42 2 4799999999998 99999999999999999986 344443210 013
Q ss_pred ecCCCc--cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhHHHHH
Q 023875 196 FPSAGG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAI 260 (276)
Q Consensus 196 y~spg~--~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ktl~al 260 (276)
|+..+. ....+++|++..... . ....+|..++.|++++++.+++..+....++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~---------~---~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l 140 (148)
T 2azw_A 86 YSNHRQTAYYNPGYFYVANTWRQ---------L---SEPLERTNTLHWVAPEEAVRLLKRGSHRWAV 140 (148)
T ss_dssp EETTTTEEEEEEEEEEEEEEEEE---------C---SSCC-CCSEEEEECHHHHHHHBSCHHHHHHH
T ss_pred cCCCCCcceEEEEEEEEEEcCcC---------C---cCCCCceeeEEEeeHHHHHhhhcchhHHHHH
Confidence 443332 234466677654321 1 1234566799999999999988755443333
No 46
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.49 E-value=1.1e-13 Score=119.89 Aligned_cols=90 Identities=19% Similarity=0.049 Sum_probs=60.4
Q ss_pred eEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEE-EEEEEEEeehhhHHH
Q 023875 143 VILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEI-SLFLYRGRVDKEIIM 221 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i-~lfla~~~~~~~~i~ 221 (276)
..|+||||++|+| |++.+||+||++||||+.+.. ...++.+. ...+..++.....+ .+|++... ..
T Consensus 90 g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~v~~--~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~---- 156 (205)
T 3q1p_A 90 GKWALPGGWADVG-YTPTEVAAKEVFEETGYEVDH--FKLLAIFD-----KEKHQPSPSATHVYKIFIGCEII-GG---- 156 (205)
T ss_dssp CCEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE--EEEEEEEE-----HHHHSCCCCSSCEEEEEEEEEEE-EE----
T ss_pred CcEECCcCccCCC-CCHHHHHHHHHHHHHCCcccc--ceEEEEEe-----ccccCCCCCCceEEEEEEEEEec-CC----
Confidence 4799999999998 999999999999999999973 33333100 01122234433444 44555432 21
Q ss_pred HhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 222 QLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 222 ~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
. ....+|..+++|++++++.++..
T Consensus 157 ----~---~~~~~E~~~~~w~~~~el~~l~~ 180 (205)
T 3q1p_A 157 ----E---KKTSIETEEVEFFGENELPNLSI 180 (205)
T ss_dssp ----C---CCCCTTSCCEEEECTTSCCCBCT
T ss_pred ----c---cCCCCcceEEEEEeHHHhhhcCC
Confidence 1 12347899999999999998775
No 47
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.49 E-value=1.8e-13 Score=110.82 Aligned_cols=104 Identities=16% Similarity=0.093 Sum_probs=68.3
Q ss_pred EecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCcc
Q 023875 123 FKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC 202 (276)
Q Consensus 123 ~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~ 202 (276)
+..++.+ .+.+..+.+.....|+||+|++|+| |++.+||+||+.||||+.+.... .++. ..+..++ .
T Consensus 29 ~~~~~~v-Ll~~r~~~~~~~g~w~~PgG~ve~g-E~~~~aa~RE~~EE~Gl~~~~~~--~~~~--------~~~~~~~-~ 95 (153)
T 3ees_A 29 LRKDGKI-LVGQRPENNSLAGQWEFPGGKIENG-ETPEEALARELNEELGIEAEVGE--LKLA--------CTHSYGD-V 95 (153)
T ss_dssp EEETTEE-EEEECCTTSTTTTCEECSEEECCTT-CCHHHHHHHHHHHHHSCEEECCC--EEEE--------EEEEETT-E
T ss_pred EEECCEE-EEEEeCCCCCCCCeEECCceeeCCC-CCHHHHHHHHHHHHHCCccccCc--eEEE--------EEEecCC-C
Confidence 3344444 3555444444456899999999998 99999999999999999987433 3331 1222222 2
Q ss_pred CeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 203 DEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 203 ~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
...+++|.+.... + ..+.+|..++.|++++++.++..
T Consensus 96 ~~~~~~~~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 132 (153)
T 3ees_A 96 GILILFYEILYWK---------G----EPRAKHHMMLEWIHPEELKHRNI 132 (153)
T ss_dssp EEEEEEEEECEEE---------S----CCCCSSSSEEEEECGGGGGGSCC
T ss_pred eEEEEEEEEEECC---------C----CcCCCccceEEEecHHHhhhCCC
Confidence 2334556554321 1 23567788999999999998754
No 48
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.47 E-value=4.8e-13 Score=114.64 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=65.6
Q ss_pred EEEEEEecce-eeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCc-ccc--cceeeeccccCCCCce
Q 023875 118 IGFLKFKADI-FCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQ-LKL--EDMIDLTAFLYPSTGC 193 (276)
Q Consensus 118 V~vl~~~~d~-~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~-~~~--~~l~~L~~l~~~~~~~ 193 (276)
++++.++.++ .+ .++++. ....|++|||++|+| |++.+||+||++||||+. +.. ..+..+.
T Consensus 48 ~~~vv~~~~~~~v-LL~~r~----~~g~w~lPgG~ve~g-Es~~eaa~REl~EEtGl~~~~~~~~~~~~~~--------- 112 (197)
T 3fcm_A 48 SSAFAVNKERNKF-LMIHHN----IYNSWAWTGGHSDNE-KDQLKVAIKELKEETGVKNPTPLLDKAFALD--------- 112 (197)
T ss_dssp EEEEEECTTSCEE-EEEEET----TTTEEECEEEECTTC-CBHHHHHHHHHHHHHCCSSCEESCSSCSEEE---------
T ss_pred EEEEEEECCCCEE-EEEEec----CCCCEECCccccCCC-CCHHHHHHHHHHHHHCCCcccccCCCceEEE---------
Confidence 4555566554 33 355532 223899999999998 999999999999999998 431 1111111
Q ss_pred eeecCCCcc------C---eEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhH
Q 023875 194 KFFPSAGGC------D---EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKV 256 (276)
Q Consensus 194 ~~y~spg~~------~---e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~kt 256 (276)
++..++.. . ....+|++... .. . .-..+++|..+++|++++++.+++.+...
T Consensus 113 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~-~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 173 (197)
T 3fcm_A 113 -VLTVNGHIKRGKYVSSHLHLNLTYLIECS-ED--------E-TLMLKEDENSGVMWIPFNEISKYCSEPHM 173 (197)
T ss_dssp -EEEECCEEETTEEECCEEEEEEEEEEECC-TT--------S-CCCCCC----CEEEEEGGGHHHHCCCGGG
T ss_pred -EeeecCccccCcccCCceeEEEEEEEEeC-CC--------c-ccCCCcccccceEEccHHHHHhhcCCHHH
Confidence 22222211 0 11134554322 11 1 11346788999999999999999874433
No 49
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.47 E-value=4.4e-14 Score=121.81 Aligned_cols=105 Identities=15% Similarity=-0.003 Sum_probs=69.3
Q ss_pred ceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeE
Q 023875 126 DIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE 205 (276)
Q Consensus 126 d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~ 205 (276)
+..+ .+++++|.+ ..|+||||++|+| |++++||+||++||||+++. .+..++. ++. + .....
T Consensus 53 ~~~v-LLv~r~~~~---g~W~lPgG~ve~g-Et~~eaa~REl~EEtGl~~~--~~~~l~~---------~~~-~-~~~~~ 114 (194)
T 2fvv_A 53 EEEV-LLVSSSRHP---DRWIVPGGGMEPE-EEPSVAAVREVCEEAGVKGT--LGRLVGI---------FEN-Q-ERKHR 114 (194)
T ss_dssp CCEE-EEEECSSCT---TSEECSEEECCTT-CCHHHHHHHHHHHHHCEEEE--EEEEEEE---------EEE-T-TTTEE
T ss_pred CCEE-EEEEEeCCC---CcEECCCCcCCCC-cCHHHHHHHHHHHHhCCccc--cceEEEE---------EEc-C-CCceE
Confidence 3444 467766654 3699999999998 99999999999999999986 4555552 222 2 13456
Q ss_pred EEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhHH
Q 023875 206 ISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVL 257 (276)
Q Consensus 206 i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ktl 257 (276)
+++|++....... .. ..+..+..+++|++++++.+++.+++..
T Consensus 115 ~~~f~~~~~~~~~-------~~--~~~~e~~~~~~W~~~~el~~~l~~~~~~ 157 (194)
T 2fvv_A 115 TYVYVLIVTEVLE-------DW--EDSVNIGRKREWFKIEDAIKVLQYHKPV 157 (194)
T ss_dssp EEEEEEEEEEECS-------SC--HHHHHHCCCEEEEEHHHHHHHHTTTCHH
T ss_pred EEEEEEEEccccC-------CC--CCcccccceEEEEEHHHHHHHHhcCcHH
Confidence 7777775321100 00 0011234679999999999988755443
No 50
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.46 E-value=3.9e-13 Score=113.48 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=68.4
Q ss_pred EecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCc-
Q 023875 123 FKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGG- 201 (276)
Q Consensus 123 ~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~- 201 (276)
+..++.+ .++++.| +.....|+||||++|+| |++.+||+||++||||+.+. .+..++.+ .+..++.
T Consensus 32 i~~~~~v-LL~~r~~-~~~~g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~~~--------~~~~~~~~ 98 (176)
T 3q93_A 32 VLQPQRV-LLGMKKR-GFGAGRWNGFGGKVQEG-ETIEDGARRELQEESGLTVD--ALHKVGQI--------VFEFVGEP 98 (176)
T ss_dssp EECSSEE-EEEEECS-STTTTSEECEEEECCTT-SCHHHHHHHHHHHHHSCEES--CCEEEEEE--------EEEETTCS
T ss_pred EEeCCEE-EEEEEcC-CCCCCeEECceecCCCC-CCHHHHHHHHHHHHHCCcce--eeEEEEEE--------EEEcCCCC
Confidence 3444444 3555433 33456899999999998 99999999999999999996 45555531 2232322
Q ss_pred cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 202 CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 202 ~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
....+++|++.... + .....|..+++|++++++.++..
T Consensus 99 ~~~~~~~f~~~~~~---------~----~~~~~e~~~~~W~~~~el~~~~~ 136 (176)
T 3q93_A 99 ELMDVHVFCTDSIQ---------G----TPVESDEMRPCWFQLDQIPFKDM 136 (176)
T ss_dssp CEEEEEEEEESCEE---------S----CCCCCSSEEEEEEETTCCCGGGB
T ss_pred cEEEEEEEEEECCC---------C----CcCCCcceeeEEeeHHHcccccc
Confidence 22234556653221 1 23455678889999999987643
No 51
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.46 E-value=2.2e-13 Score=117.98 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=60.1
Q ss_pred CeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeE-EEEEEEEEeehhhHH
Q 023875 142 RVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEE-ISLFLYRGRVDKEII 220 (276)
Q Consensus 142 ~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~-i~lfla~~~~~~~~i 220 (276)
...|+||||++|+| |++.+||+||++||||+.+. ....++.+. ...+..++..... ..+|.+... .
T Consensus 90 ~g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~---- 156 (206)
T 3o8s_A 90 DGLWSLPGGWCDVD-QSVKDNVVKEVKEEAGLDVE--AQRVVAILD-----KHKNNPAKSAHRVTKVFILCRLL-G---- 156 (206)
T ss_dssp TSCEECSEEECCTT-SCHHHHHHHHHHHHHCEEEE--EEEEEEEEE-----HHHHCC-----CEEEEEEEEEEE-E----
T ss_pred CCeEECCeeccCCC-CCHHHHHHHHHHHHHCCcce--eeeEEEEEe-----ccccCCCCCCceEEEEEEEEEec-C----
Confidence 45799999999998 99999999999999999986 344443210 0012333333333 344455432 2
Q ss_pred HHhcCCCCCCCCCCceEEEEEEchhhHhhhcCCh
Q 023875 221 MQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 254 (276)
Q Consensus 221 ~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ 254 (276)
+. ....+|..++.|++++++.++..+.
T Consensus 157 ----~~---~~~~~E~~~~~w~~~~el~~l~~~~ 183 (206)
T 3o8s_A 157 ----GE---FQPNSETVASGFFSLDDLPPLYLGK 183 (206)
T ss_dssp ----EC---CCCCSSCSEEEEECTTSCCCBCTTT
T ss_pred ----Ce---ecCCCCceEEEEEeHHHhhhccCCC
Confidence 11 1233789999999999999887643
No 52
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.45 E-value=1.1e-12 Score=109.55 Aligned_cols=118 Identities=17% Similarity=0.104 Sum_probs=75.6
Q ss_pred EEEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeee
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFF 196 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y 196 (276)
+|+++.+..++.+ .+++ |.. ...|++|||++|+| |++.+||+||++||||+.+. .+..++.+.. ...|
T Consensus 10 ~v~~~i~~~~~~v-Ll~~--r~~--~~~w~~p~G~~e~g-E~~~~aa~RE~~EE~G~~~~--~~~~~~~~~~----~~~~ 77 (164)
T 2kdv_A 10 NVGIVICNRQGQV-MWAR--RFG--QHSWQFPQGGINPG-ESAEQAMYRELFEEVGLSRK--DVRILASTRN----WLRY 77 (164)
T ss_dssp EEEEEEECTTSEE-EEEE--ETT--CCCEECCEEECCTT-CCHHHHHHHHHHHHHCCCGG--GEEEEEECSS----CEEE
T ss_pred EEEEEEEccCCEE-EEEE--EcC--CCeEECCeeecCCC-CCHHHHHHHHHHHHHCCCcc--ceEEEEEecc----eeEE
Confidence 5667777666554 3555 332 35799999999998 99999999999999999986 4555543100 0012
Q ss_pred cCC----------CccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 197 PSA----------GGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 197 ~sp----------g~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
..+ ......+++|++........+ .....++.|..+++|++++++.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~------~l~~~~~~E~~~~~W~~~~e~~~~l~ 137 (164)
T 2kdv_A 78 KLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEI------NMQTSSTPEFDGWRWVSYWYPVRQVV 137 (164)
T ss_dssp ECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGC------CSCSSSSCSEEEEEEEETTTGGGGSC
T ss_pred ecCcceeeeccCcccccceeEEEEEEecCCcccc------ccCCCCCchhceEEEecHHHhhhhhh
Confidence 222 223346677887643222111 00011346899999999999877664
No 53
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.43 E-value=2.8e-13 Score=112.23 Aligned_cols=85 Identities=19% Similarity=0.130 Sum_probs=57.1
Q ss_pred EEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCC-CccCeEEEEEEEEEeehhhHHHH
Q 023875 144 ILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSA-GGCDEEISLFLYRGRVDKEIIMQ 222 (276)
Q Consensus 144 ~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~sp-g~~~e~i~lfla~~~~~~~~i~~ 222 (276)
.|+||||++|+| |++.+||+||++||||+.+.. +..++.+ .+..+ ......+++|.+... .
T Consensus 38 ~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~----- 99 (161)
T 3exq_A 38 GHSFPGGHVEVG-EPCATAAIREVFEETGLRLSG--VTFCGTC--------EWFDDDRQHRKLGLLYRASNF--T----- 99 (161)
T ss_dssp SBBCCCCBCCTT-SCHHHHHHHHHHHHHCCEESC--CEEEEEE--------EEECSSCSSEEEEEEEEECCE--E-----
T ss_pred CEEccceecCCC-CCHHHHHHHHHHHhhCcEecC--CcEEEEE--------ecccCCCCeEEEEEEEEEecc--C-----
Confidence 589999999998 999999999999999999873 4444421 22221 222233444544321 1
Q ss_pred hcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 223 LQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 223 ~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+ .....|..+++|++++++.++..
T Consensus 100 --~----~~~~~e~~~~~W~~~~el~~~~~ 123 (161)
T 3exq_A 100 --G----TLKASAEGQLSWLPITALTRENS 123 (161)
T ss_dssp --S----CCCGGGTTTEEEECGGGCCTTTB
T ss_pred --C----ccCCCccceEEEeeHHHhhhCcc
Confidence 1 12345566799999999988754
No 54
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.42 E-value=1.9e-12 Score=105.68 Aligned_cols=85 Identities=20% Similarity=0.217 Sum_probs=59.7
Q ss_pred EEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHHh
Q 023875 144 ILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQL 223 (276)
Q Consensus 144 ~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~~ 223 (276)
.|++|||++|+| |++.+||+||++||||+.+.. ...++. ..+..+......+++|.+....
T Consensus 37 gw~lPgG~ve~g-E~~~~aa~RE~~EEtGl~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-------- 97 (155)
T 2b06_A 37 GYAFPGGHVEND-EAFAESVIREIYEETGLTIQN--PQLVGI--------KNWPLDTGGRYIVICYKATEFS-------- 97 (155)
T ss_dssp EEECCCCBCCTT-SCHHHHHHHHHHHHHSEEEES--CEEEEE--------EEEECTTSCEEEEEEEEECEEE--------
T ss_pred CEeccceecCCC-CCHHHHHHHHHHHHhCccccC--CcEEEE--------EeeccCCCceEEEEEEEEEecC--------
Confidence 389999999998 999999999999999999974 334432 1222222334455666654321
Q ss_pred cCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 224 QGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 224 ~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+ .....|..+++|++++++.++..
T Consensus 98 -~----~~~~~e~~~~~W~~~~el~~~~~ 121 (155)
T 2b06_A 98 -G----TLQSSEEGEVSWVQKDQIPNLNL 121 (155)
T ss_dssp -E----CCCCBTTBEEEEEEGGGGGGSCB
T ss_pred -C----CCCCCcceeeEEeeHHHhhhCCC
Confidence 1 12346778999999999998765
No 55
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.42 E-value=3e-13 Score=119.26 Aligned_cols=106 Identities=18% Similarity=0.061 Sum_probs=69.7
Q ss_pred ccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCc--cCeEEE-
Q 023875 131 ETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGG--CDEEIS- 207 (276)
Q Consensus 131 ~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~--~~e~i~- 207 (276)
.++++.+.+. ...|++|||++|+| |++.+||+||++||||+.+. .+..++. +..++. ....+.
T Consensus 31 LLv~r~~~~~-~g~w~lPGG~ve~g-Es~~~Aa~REl~EEtGl~~~--~~~~l~~----------~~~~~r~~~~~~v~~ 96 (226)
T 2fb1_A 31 LLLKRNFEPA-MGEWSLMGGFVQKD-ESVDDAAKRVLAELTGLENV--YMEQVGA----------FGAIDRDPGERVVSI 96 (226)
T ss_dssp EEEECSSSSS-TTCEECEEEECCTT-SCHHHHHHHHHHHHHCCCSC--EEEEEEE----------ECCTTSSSSSCEEEE
T ss_pred EEEECcCCCC-CCCEECCeeccCCC-CCHHHHHHHHHHHHHCCCCC--ceEEEEE----------eCCCCcCCCceEEEE
Confidence 4666545332 34799999999998 99999999999999999986 4566652 222221 112333
Q ss_pred EEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhHHHHHH
Q 023875 208 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTAIA 261 (276)
Q Consensus 208 lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ktl~al~ 261 (276)
+|++... .. .. ..+.+|..++.|++++++.++..|...+.+.+
T Consensus 97 ~y~a~~~--~~-------~~--~~~~~e~~~~~W~~~~el~~l~~dh~~il~~a 139 (226)
T 2fb1_A 97 AYYALIN--IN-------EY--DRELVQKHNAYWVNINELPALIFDHPEMVDKA 139 (226)
T ss_dssp EEEEECC--TT-------SS--CHHHHHHTTEEEEETTSCCCBSTTHHHHHHHH
T ss_pred EEEEEec--Cc-------cc--ccCCccccceEEEEHHHhhhccCCHHHHHHHH
Confidence 4555432 11 11 12345777899999999998777765444443
No 56
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.41 E-value=8.8e-13 Score=107.68 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=60.8
Q ss_pred eEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCcc-CeEEEEEEEEEeehhhHHH
Q 023875 143 VILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC-DEEISLFLYRGRVDKEIIM 221 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~-~e~i~lfla~~~~~~~~i~ 221 (276)
..|+||||++|+| |++.+||+||++||||+.+...++..... ..|+..+.. ....++|++.....
T Consensus 39 ~~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~f~~~~~~~----- 104 (154)
T 2pqv_A 39 GKYYTIGGAIQVN-ESTEDAVVREVKEELGVKAQAGQLAFVVE--------NRFEVDGVSYHNIEFHYLVDLLED----- 104 (154)
T ss_dssp TEEECEEEECBTT-CCHHHHHHHHHHHHHCCCEEEEEEEEEEE--------EEEEETTEEEEEEEEEEEEEESSC-----
T ss_pred CeEECcccCcCCC-CCHHHHHHHHHHHHhCCeeeeceEEEEEe--------eeecCCCCcceEEEEEEEEEecCC-----
Confidence 4799999999998 99999999999999999987433333221 133333322 22344666654211
Q ss_pred HhcCCCCCCCCCCceEEEEEEchhhHhhhc
Q 023875 222 QLQGKETGLRDHGELIKVRVVPYRELWRTT 251 (276)
Q Consensus 222 ~~~g~~~g~~d~~E~i~v~wv~leel~~~i 251 (276)
......+++|..+++|++++++.++.
T Consensus 105 ----~~~~~~~~~e~~~~~W~~~~el~~~~ 130 (154)
T 2pqv_A 105 ----APLTMQEDEKRQPCEWIDLDKLQNIQ 130 (154)
T ss_dssp ----CCSEEEETTEEEEEEEEEGGGGGGSC
T ss_pred ----CCcccCCCCceeeEEEeEHHHHhhcC
Confidence 11001246678899999999998864
No 57
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.41 E-value=1.1e-13 Score=108.92 Aligned_cols=103 Identities=15% Similarity=0.055 Sum_probs=67.0
Q ss_pred ecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccC
Q 023875 124 KADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCD 203 (276)
Q Consensus 124 ~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~ 203 (276)
..++.+ .+.++.+.......|+||+|++|+| |++.+||+||++||||+.+. .+..++.. .+..+. ..
T Consensus 13 ~~~~~v-Ll~~r~~~~~~~g~w~~PgG~~e~g-E~~~~aa~RE~~EE~G~~~~--~~~~~~~~--------~~~~~~-~~ 79 (129)
T 1mut_A 13 NENNEI-FITRRAADAHMANKLEFPGGKIEMG-ETPEQAVVRELQEEVGITPQ--HFSLFEKL--------EYEFPD-RH 79 (129)
T ss_dssp ETTTEE-EEEECSSCCSSSCCEECCCCCSSSC-SSTTHHHHHHHHTTTCCSSC--EECCCCCC--------BCCCSS-CE
T ss_pred ecCCEE-EEEEeCCCCCCCCeEECCccCcCCC-CCHHHHHHHHHHHHhCCccc--cceEEEEE--------EEecCC-ce
Confidence 444444 3555444434456899999999998 99999999999999999986 34444421 111111 22
Q ss_pred eEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 204 EEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 204 e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
..+++|.+... . + ....+|..++.|++++++.++..
T Consensus 80 ~~~~~~~~~~~-~--------~----~~~~~e~~~~~W~~~~el~~~~~ 115 (129)
T 1mut_A 80 ITLWFWLVERW-E--------G----EPWGKEGQPGEWMSLVGLNADDF 115 (129)
T ss_dssp EECCCEEEEEC-S--------S----CCCCCSSCCCEEEESSSCCTTTS
T ss_pred EEEEEEEEEcc-C--------C----ccCCcccceeEEeCHHHcccccC
Confidence 23456666532 1 1 22456778899999999988653
No 58
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.41 E-value=8.7e-13 Score=119.75 Aligned_cols=105 Identities=22% Similarity=0.281 Sum_probs=74.8
Q ss_pred EEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCc
Q 023875 122 KFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGG 201 (276)
Q Consensus 122 ~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~ 201 (276)
.+..+..+ .++++.+.+ ...|++|||.+|+| |++++||+||++||||+++. .+..++. ..++.+
T Consensus 146 ~v~~~~~v-LL~rr~~~~--~g~w~lPgG~vE~G-Et~eeAa~REv~EEtGl~v~--~~~~~~~--------~~~~~~-- 209 (269)
T 1vk6_A 146 AIRRDDSI-LLAQHTRHR--NGVHTVLAGFVEVG-ETLEQAVAREVMEESGIKVK--NLRYVTS--------QPWPFP-- 209 (269)
T ss_dssp EEEETTEE-EEEEETTTC--SSCCBCEEEECCTT-CCHHHHHHHHHHHHHCCEEE--EEEEEEE--------EEEETT--
T ss_pred EEEeCCEE-EEEEecCCC--CCcEECCcCcCCCC-CCHHHHHHHHHHHHhCceee--eEEEEEE--------EecCCC--
Confidence 34444444 477766665 34699999999998 99999999999999999997 5666653 123322
Q ss_pred cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCCh
Q 023875 202 CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDA 254 (276)
Q Consensus 202 ~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ 254 (276)
+..+.+|+++... +.. ..+++|..+++|++++++..+..+.
T Consensus 210 -~~~~~~f~a~~~~---------~~~--~~~~~E~~~~~W~~~~el~~l~~~~ 250 (269)
T 1vk6_A 210 -QSLMTAFMAEYDS---------GDI--VIDPKELLEANWYRYDDLPLLPPPG 250 (269)
T ss_dssp -EEEEEEEEEEEEE---------CCC--CCCTTTEEEEEEEETTSCCSCCCTT
T ss_pred -CEEEEEEEEEECC---------CCc--CCCCcceEEEEEEEHHHhhhcccCc
Confidence 3466777776431 111 2467899999999999998876554
No 59
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.37 E-value=5.8e-12 Score=117.96 Aligned_cols=99 Identities=21% Similarity=0.203 Sum_probs=63.2
Q ss_pred eEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCC----------ccCeEEEEEEEE
Q 023875 143 VILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAG----------GCDEEISLFLYR 212 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg----------~~~e~i~lfla~ 212 (276)
..|+||||++|+| |++.+||+||++||||+++... ..++... ..++.+| .....+++|++.
T Consensus 49 g~W~lPgG~ve~g-Es~~~AA~REl~EEtGl~~~~~--~~l~~~~------~~~~~~g~~~~~~~~~~~~~~~~~~f~~~ 119 (364)
T 3fjy_A 49 DDWSWPKGKLEQN-ETHRHAAVREIGEETGSPVKLG--PYLCEVE------YPLSEEGKKTRHSHDCTADTKHTLYWMAQ 119 (364)
T ss_dssp TEEECCEEECCTT-CCHHHHHHHHHHHHHSCCEEEE--EEEEEEC---------------------------CEEEEEEE
T ss_pred CCEECCcCCCCCC-CCHHHHHHHHHHHHhCCeeeec--cccceEE------EeccCCCcccccccccccCceEEEEEEEE
Confidence 5799999999998 9999999999999999998643 3333210 1222222 124667778876
Q ss_pred EeehhhHHH---HhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 213 GRVDKEIIM---QLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 213 ~~~~~~~i~---~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.......+. .+. +.. ..+++|..+++|++++++.+++.
T Consensus 120 ~~~~~~~~~l~~~~~-~~~-~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 120 PISADDAEHLLDAFG-PVH-RADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ECCHHHHHTTHHHHC-CCC-CCCTTTCCEEEEEEHHHHHHHCS
T ss_pred ecCCccccccccccC-ccc-cCCccceeeeecCcHHHHHHHhc
Confidence 543221000 111 111 24678999999999999999886
No 60
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.36 E-value=6.7e-12 Score=116.08 Aligned_cols=112 Identities=20% Similarity=0.205 Sum_probs=72.7
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCccccccee--eeccccCCCCceee
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMI--DLTAFLYPSTGCKF 195 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~--~L~~l~~~~~~~~~ 195 (276)
|+++.+..+ .+ .++++.+.+ +...|++|||++|+| |++++||+||++||||+++....+. ... ...
T Consensus 211 v~~vv~~~~-~v-LL~~r~~~~-~~g~w~lPgG~ve~g-Et~~~aa~REl~EEtGl~v~~~~~~~~~~~--------~~~ 278 (352)
T 2qjt_B 211 VDALVIVND-HI-LMVQRKAHP-GKDLWALPGGFLECD-ETIAQAIIRELFEETNINLTHEQLAIAKRC--------EKV 278 (352)
T ss_dssp EEEEEEETT-EE-EEEEESSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSCCHHHHHHHEEE--------EEE
T ss_pred EEEEEEECC-EE-EEEEEcCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHHHhhCCCcccchhcceeee--------eEE
Confidence 444444433 33 366655544 346899999999998 9999999999999999998632221 111 024
Q ss_pred ecCCCccC---eEEEEEEEEEeehhhHHHHhcCC-CCCCCCCCceEEEEEEch-hhHhhh
Q 023875 196 FPSAGGCD---EEISLFLYRGRVDKEIIMQLQGK-ETGLRDHGELIKVRVVPY-RELWRT 250 (276)
Q Consensus 196 y~spg~~~---e~i~lfla~~~~~~~~i~~~~g~-~~g~~d~~E~i~v~wv~l-eel~~~ 250 (276)
|..++... ...++|++.... +. .....+++|..+++|+++ +++.++
T Consensus 279 ~~~~~~~~~~~~~~~~f~~~~~~---------~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 279 FDYPDRSVRGRTISHVGLFVFDQ---------WPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp ECCTTSCTTSEEEEEEEEEEECS---------CSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred ecCCCCCCCccEEEEEEEEEEeC---------CCCCCccCCCccceEEEEecHHHHHHhh
Confidence 55555432 245667765421 11 011235789999999999 999885
No 61
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.34 E-value=6.5e-12 Score=105.18 Aligned_cols=76 Identities=20% Similarity=0.310 Sum_probs=53.9
Q ss_pred eEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHHHH
Q 023875 143 VILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEIIMQ 222 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i~~ 222 (276)
..|+||||++|+| |++.+||+||++||||+++. .+..++ .|..+. ...++|++.. .
T Consensus 37 g~w~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~--~~~~l~----------~~~~~~---~~~~~f~~~~--~------ 92 (163)
T 3f13_A 37 GRYNLPGGKANRG-ELRSQALIREIREETGLRIN--SMLYLF----------DHITPF---NAHKVYLCIA--Q------ 92 (163)
T ss_dssp --BBCSEEECCTT-CCHHHHHHHHHHHHHCCCCC--EEEEEE----------EEECSS---EEEEEEEEEC---------
T ss_pred CeEECCceeCCCC-CCHHHHHHHHHHHHHCcccc--eeEEEE----------EEecCC---eEEEEEEEEE--C------
Confidence 4799999999998 99999999999999999986 455554 344443 5566777742 2
Q ss_pred hcCCCCCCCCCCceEEEEEEchhhH
Q 023875 223 LQGKETGLRDHGELIKVRVVPYREL 247 (276)
Q Consensus 223 ~~g~~~g~~d~~E~i~v~wv~leel 247 (276)
+.. ...+|..++.|++.+++
T Consensus 93 --~~~---~~~~E~~~~~W~~~~~~ 112 (163)
T 3f13_A 93 --GQP---KPQNEIERIALVSSPDT 112 (163)
T ss_dssp --CCC---CCCTTCCEEEEESSTTC
T ss_pred --CcC---ccCCCceEEEEECcccc
Confidence 221 22348889999995443
No 62
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.34 E-value=1.6e-11 Score=111.17 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=65.3
Q ss_pred ccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCcc---CeEEE
Q 023875 131 ETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC---DEEIS 207 (276)
Q Consensus 131 ~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~---~e~i~ 207 (276)
.++++.+.+. ...|+||||++|+| |++.+||+||++||||+.+....+..++. |..++.. ....+
T Consensus 59 LLv~R~~~p~-~g~W~lPGG~ve~g-Es~~~AA~REl~EEtGl~v~~~~l~~l~~----------~~~~~r~~~~~~~~~ 126 (273)
T 2fml_A 59 LLIQRKGHPF-RNSWALPGGFVNRN-ESTEDSVLRETKEETGVVISQENIEQLHS----------FSRPDRDPRGWVVTV 126 (273)
T ss_dssp EEEEECSSSS-TTCEECCEEECCTT-SCHHHHHHHHHHHHHCCCCCGGGEEEEEE----------ECCTTSSTTSSEEEE
T ss_pred EEEEccCCCC-CCcEECCccCCCCC-cCHHHHHHHHHHHHHCCCCCcCcEEEEEE----------EcCCCCCCCceEEEE
Confidence 3565545443 35799999999998 99999999999999998876556777753 3333321 12345
Q ss_pred EEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhh
Q 023875 208 LFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWR 249 (276)
Q Consensus 208 lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~ 249 (276)
+|++... . .. ....+|..++.|++++++.+
T Consensus 127 ~y~a~~~--~--------~~--~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 127 SYLAFIG--E--------EP--LIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp EEEEECC--C--------CC--CCCCTTEEEEEEEEEEEETT
T ss_pred EEEEEeC--C--------CC--CCCCcceeeEEEEEhhHhhh
Confidence 5665432 1 11 24567889999999998644
No 63
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.34 E-value=4.3e-12 Score=108.37 Aligned_cols=90 Identities=20% Similarity=0.192 Sum_probs=57.9
Q ss_pred CeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCcc-Ce-EEEEEEEEEeehhhH
Q 023875 142 RVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGC-DE-EISLFLYRGRVDKEI 219 (276)
Q Consensus 142 ~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~-~e-~i~lfla~~~~~~~~ 219 (276)
...|++|||++|+| |++.+||+||++||||+.+...++..+.. ..+...+.. .. .+++|.+....
T Consensus 25 ~g~W~lPGG~ve~g-Es~~~aa~REl~EEtGl~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~f~a~~~~---- 91 (188)
T 3fk9_A 25 RGWWVAPGGKMEAG-ESILETVKREYWEETGITVKNPELKGIFS--------MVIFDEGKIVSEWMLFTFKATEHE---- 91 (188)
T ss_dssp TCCEECCEEECCTT-CCHHHHHHHHHHHHHSCEESSCEEEEEEE--------EEEEETTEEEEEEEEEEEEESCEE----
T ss_pred CCeEECCeecccCC-CCHHHHHHHHHHHHHCCCCCCceEEEEEE--------EEecCCCcceEEEEEEEEEEECCC----
Confidence 34799999999998 99999999999999999997433333321 122222211 11 44555554221
Q ss_pred HHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 220 IMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 220 i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+. .....|..++.|++++++.++..
T Consensus 92 -----~~---~~~~~e~~~~~W~~~~el~~~~l 116 (188)
T 3fk9_A 92 -----GE---MLKQSPEGKLEWKKKDEVLELPM 116 (188)
T ss_dssp -----SC---CCSEETTEEEEEEEGGGGGGSCC
T ss_pred -----CC---CcCCCCCEeEEEEEHHHhhhCCC
Confidence 11 12233446899999999987643
No 64
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.32 E-value=4.7e-12 Score=112.63 Aligned_cols=110 Identities=17% Similarity=0.112 Sum_probs=67.4
Q ss_pred ccCeeeeeCCCCeEEEeceeecCC--CCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecCCCccCeEEEE
Q 023875 131 ETGQKVRVPTGRVILELPAGMLDD--DKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISL 208 (276)
Q Consensus 131 ~~~rq~R~~~g~~~wElPaG~vD~--G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~l 208 (276)
.+++..+.+ ....|++|||++|+ | |++.+||+||++||||+.+. .+..++.+. .....++. ......
T Consensus 40 LLv~R~~~~-~~g~W~lPGG~ve~~~g-Es~~~AA~REl~EEtGl~~~--~~~~l~~~~------~~~r~~~~-~~~~~~ 108 (240)
T 3gz5_A 40 LLVQRSNHP-FLGLWGLPGGFIDETCD-ESLEQTVLRKLAEKTAVVPP--YIEQLCTVG------NNSRDARG-WSVTVC 108 (240)
T ss_dssp EEEECCSSS-STTCEECSEEECCTTTC-SBHHHHHHHHHHHHHSSCCS--EEEEEEEEE------ESSSSTTS-CEEEEE
T ss_pred EEEECcCCC-CCCCEECCccccCCCCC-cCHHHHHHHHHHHHHCCCCC--ceeeEEEeC------CCccCCCc-eEEEEE
Confidence 355533333 34579999999999 9 99999999999999999986 566665310 01112322 223344
Q ss_pred EEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhh--hcCChhHHHHHHH
Q 023875 209 FLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWR--TTPDAKVLTAIAL 262 (276)
Q Consensus 209 fla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~--~i~d~ktl~al~l 262 (276)
|++... .... ....+|..++.|++++++.+ +..|.+-+.+.++
T Consensus 109 y~a~~~--~~~~---------~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~ 153 (240)
T 3gz5_A 109 YTALMS--YQAC---------QIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQAR 153 (240)
T ss_dssp EEEECC--HHHH---------HHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHH
T ss_pred EEEEec--cccc---------CCCCCcccceEEecHHHcccCCcchhHHHHHHHHH
Confidence 555432 2211 01234666899999999974 4446555544443
No 65
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.31 E-value=4.5e-12 Score=116.44 Aligned_cols=114 Identities=16% Similarity=0.295 Sum_probs=67.4
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
|+++.+..+ .+ .++++.+.+ +...|++|||++|+| |++++||+||++||||+++....+ ++.+. ....|.
T Consensus 206 v~~vi~~~~-~v-LL~~r~~~~-~~g~w~lPgG~ve~g-E~~~~aa~REl~EEtGl~~~~~~~--~~~~~----~~~~~~ 275 (341)
T 2qjo_A 206 TDAVVVQAG-HV-LMVRRQAKP-GLGLIALPGGFIKQN-ETLVEGMLRELKEETRLKVPLPVL--RGSIV----DSHVFD 275 (341)
T ss_dssp EEEEEEETT-EE-EEEECCSSS-STTCEECSEEECCTT-SCHHHHHHHHHHHHHCCSSCHHHH--HHTEE----EEEEEC
T ss_pred EEEEEEeCC-EE-EEEEecCCC-CCCeEECCCCcCCCC-CCHHHHHHHHHhhhhCCccccccc--ccccc----ceEEEe
Confidence 444444433 33 366654433 355799999999998 999999999999999999863222 11000 002455
Q ss_pred CCCcc---CeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhh
Q 023875 198 SAGGC---DEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT 250 (276)
Q Consensus 198 spg~~---~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~ 250 (276)
.++.. ....++|++... . +......+++|..+++|++++++.++
T Consensus 276 ~~~~~~~~~~~~~~f~~~~~-~--------~~~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 276 APGRSLRGRTITHAYFIQLP-G--------GELPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp CTTSCTTSCEEEEEEEEECC-S--------SSCCCCC------CEEEEEHHHHHHT
T ss_pred CCCCCCCCcEEEEEEEEEec-C--------CCcCccCCCCceeeEEEeeHHHHhhh
Confidence 55543 234566777532 1 11111245678899999999999985
No 66
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.31 E-value=3.9e-12 Score=104.65 Aligned_cols=34 Identities=29% Similarity=0.450 Sum_probs=31.6
Q ss_pred eEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccc
Q 023875 143 VILELPAGMLDDDKGDFVGTAVREVEEETGIQLKL 177 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~ 177 (276)
..|++|||++|+| |++.+||+||++||||+++..
T Consensus 23 g~W~lPgG~ve~g-Es~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 23 GVYIYPGGHVEHN-ETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp CSEECSEEECCTT-CCHHHHHHHHHHHHHSEEEEE
T ss_pred CcEECCeeecCCC-CCHHHHHHHHHHHHHCCccee
Confidence 4699999999998 999999999999999999863
No 67
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.28 E-value=2.7e-11 Score=99.17 Aligned_cols=86 Identities=8% Similarity=0.041 Sum_probs=56.9
Q ss_pred CeEEEeceeecCCCCCCHH-HHHHHHHHHHhC-CcccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhH
Q 023875 142 RVILELPAGMLDDDKGDFV-GTAVREVEEETG-IQLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEI 219 (276)
Q Consensus 142 ~~~wElPaG~vD~G~Es~~-eAA~REL~EETG-l~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~ 219 (276)
...|+||+|.+|.| |++. +||+||++|||| +.+. .+..++.+ .+..+. ....+++|++... .
T Consensus 48 ~g~w~~PgG~~e~g-E~~~~~a~~REl~EE~g~l~~~--~~~~l~~~--------~~~~~~-~~~~~~~~~~~~~--~-- 111 (155)
T 1x51_A 48 AGLWEFPSVTWEPS-EQLQRKALLQELQRWAGPLPAT--HLRHLGEV--------VHTFSH-IKLTYQVYGLALE--G-- 111 (155)
T ss_dssp CSCEECCEEECCSS-HHHHHHHHHHHHHHHSCCCCST--TCEECCCB--------CCBCSS-CEEEEEEEEEECS--S--
T ss_pred CceecCCccccCCC-CCHHHHHHHHHHHHHhCCccee--eeeecceE--------EEecCC-ccEEEEEEEEEEc--C--
Confidence 45899999999998 9996 999999999999 8775 34455421 111111 1223456665421 1
Q ss_pred HHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 220 IMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 220 i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
+ .....|..++.|++++++.++..
T Consensus 112 -----~----~~~~~e~~~~~W~~~~el~~~~~ 135 (155)
T 1x51_A 112 -----Q----TPVTTVPPGARWLTQEEFHTAAV 135 (155)
T ss_dssp -----C----CCCCCCCTTEEEEEHHHHHHSCC
T ss_pred -----C----CCCCCCCCccEEccHHHhhhcCC
Confidence 1 12234556789999999988654
No 68
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.26 E-value=2e-11 Score=112.51 Aligned_cols=175 Identities=15% Similarity=0.110 Sum_probs=106.0
Q ss_pred cceeeeeceEEEEEEEEEeCCCcEEEEEEEEeeeeecCC---EEEEEEEecce---eeeccCeeeeeCCC---CeEE-Ee
Q 023875 78 ESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGK---RIGFLKFKADI---FCKETGQKVRVPTG---RVIL-EL 147 (276)
Q Consensus 78 ~~~~f~~~~~~l~~~~~~~~~G~~~~~~v~~~~v~~~g~---~V~vl~~~~d~---~~~~~~rq~R~~~g---~~~w-El 147 (276)
+...+++|..-+. .+.-.+|......+....+-.||- +|-+..++.+. .. -=|.|.... ...| .+
T Consensus 80 ~~g~~~gwr~E~~--~V~~~~~~~~~~~~eR~~~~~~G~~~~~vh~~~~~~~~~~~~l---ll~rRs~~K~~~PG~wd~s 154 (300)
T 3dup_A 80 DEGVVPAPRGELY--RVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHL---WIGRRSPDKSVAPGKLDNM 154 (300)
T ss_dssp HTTSSCCCCSCEE--EECSSTTSCCCEEEEGGGTGGGTCCEEEEEEEEEESCGGGCEE---EEEEECTTCSSSTTCEEES
T ss_pred HcCCCCccccccE--EeecCCCCeeeEEEEhhhccccceEEEEEEEEEEEecCCeeEE---EEEeCCCcccCCCCccccc
Confidence 3446777764332 222234422233332223444563 45566666544 22 122354443 3478 69
Q ss_pred ceeecCCCCCCHHHHHHHHHHHHhCCcccc-cceeeeccccCCCCceeeecC-CCccCeEEEEEEEEEeehhhHHHHhcC
Q 023875 148 PAGMLDDDKGDFVGTAVREVEEETGIQLKL-EDMIDLTAFLYPSTGCKFFPS-AGGCDEEISLFLYRGRVDKEIIMQLQG 225 (276)
Q Consensus 148 PaG~vD~G~Es~~eAA~REL~EETGl~~~~-~~l~~L~~l~~~~~~~~~y~s-pg~~~e~i~lfla~~~~~~~~i~~~~g 225 (276)
|||++++| |++.+||+||++||+|+.+.. ..+..++.+. ..+.+ +|...+.+++|.+... .+
T Consensus 155 vaG~i~~G-Es~~eaA~REl~EElGI~~~~~~~l~~~g~i~------y~~~~~~G~~~E~~~vy~~~l~--~~------- 218 (300)
T 3dup_A 155 VAGGQPAD-LSLRQNLIKECAEEADLPEALARQAIPVGAIT------YCMESPAGIKPDTLFLYDLALP--ED------- 218 (300)
T ss_dssp EEEECCTT-SCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEE------EEEEETTEEEEEEEEEEEEECC--TT-------
T ss_pred cccCCCCC-CCHHHHHHHHHHHHhCCChhhhhhccccceEE------EEEecCCCeEEEEEEEEEEEec--CC-------
Confidence 99999998 999999999999999998752 1334443211 12333 3456667777766432 11
Q ss_pred CCCCCCCCCceEEEEEEchhhHhhhcCC-hhH--HHHHHHHHHHHhCCCCCC
Q 023875 226 KETGLRDHGELIKVRVVPYRELWRTTPD-AKV--LTAIALYEMASKEELLPS 274 (276)
Q Consensus 226 ~~~g~~d~~E~i~v~wv~leel~~~i~d-~kt--l~al~l~~~l~~~g~l~~ 274 (276)
.....+++|..+++|++++|+.+++.+ +.. -.++.+...|.+.|.|-.
T Consensus 219 -~~p~~~~~EV~~~~~v~~~El~~~l~~pg~F~p~~~lV~ldfl~RhG~i~~ 269 (300)
T 3dup_A 219 -FRPHNTDGEMADFMLWPAAKVVEAVRTTEAFKFNVNLTVIDFAIRHGLIDP 269 (300)
T ss_dssp -CCCCCTTSSEEEEEEEEHHHHHHHHHHCCCBCTTHHHHHHHHHHHTTSSCT
T ss_pred -CcCCCCchHhheEEEECHHHHHHHHhcCCCcCccHHHHHHHHHHHhCCcCC
Confidence 111357899999999999999998865 432 255556678899998754
No 69
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.15 E-value=2.2e-11 Score=106.99 Aligned_cols=86 Identities=20% Similarity=0.162 Sum_probs=57.6
Q ss_pred eEEEe-ceeecCCCCCC--H----HHHHHHHHHHHhCCcccccceeeeccccCCCCceeeecC-CCccCeEEEEEEEEEe
Q 023875 143 VILEL-PAGMLDDDKGD--F----VGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPS-AGGCDEEISLFLYRGR 214 (276)
Q Consensus 143 ~~wEl-PaG~vD~G~Es--~----~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~s-pg~~~e~i~lfla~~~ 214 (276)
..|++ |||+||+| |+ + ++||+||++||||+++. .+..++. ..+.. +.+......+|.|+..
T Consensus 97 g~w~~gPGGhVE~G-Es~~p~EtleeAa~REl~EEtGl~v~--~~~~ig~--------~~~~~~~~~~~~l~~~f~~~~~ 165 (211)
T 3e57_A 97 NLYSLGIGGHVREG-DGATPREAFLKGLEREVNEEVDVSLR--ELEFLGL--------INSSTTEVSRVHLGALFLGRGK 165 (211)
T ss_dssp --CBSSEECCCBGG-GCSSHHHHHHHHHHHHHHHHEEEEEE--EEEEEEE--------EECCSSHHHHTEEEEEEEEEEE
T ss_pred CCcccccceEEeCC-CCCCchhhHHHHHHHHHHHHhCCeee--ccEEEEE--------EeccCCCCCeEEEEEEEEEEeC
Confidence 36888 99999998 98 4 99999999999999886 4555552 12211 1111122345766543
Q ss_pred ehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 215 VDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 215 ~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
. + ...+.|..+++|++++++.++..
T Consensus 166 -~--------g----~~~~~E~~~~~W~~~~eL~~~~~ 190 (211)
T 3e57_A 166 -F--------F----SVKEKDLFEWELIKLEELEKFSG 190 (211)
T ss_dssp -E--------E----EESCTTTCEEEEEEHHHHHHHGG
T ss_pred -C--------c----eeCCCCeEEEEEEEHHHHHHhHh
Confidence 1 1 23456778899999999998753
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.11 E-value=1.5e-10 Score=102.81 Aligned_cols=114 Identities=18% Similarity=0.107 Sum_probs=75.7
Q ss_pred EEEEEEEecceeeeccCeeeeeCCC---CeEEEece-eecCCCC-----CC---HHHHHHHHHHHHhCCcccc---ccee
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTG---RVILELPA-GMLDDDK-----GD---FVGTAVREVEEETGIQLKL---EDMI 181 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g---~~~wElPa-G~vD~G~-----Es---~~eAA~REL~EETGl~~~~---~~l~ 181 (276)
+|+++.++.++.+ .+ |.|.... ...|++|+ |+++.|+ |+ +.+||+||++||||+.+.. +++.
T Consensus 61 av~v~v~~~~g~l-LL--q~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~ 137 (235)
T 2dho_A 61 AFSVFLFNTENKL-LL--QQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEIN 137 (235)
T ss_dssp EEEEEEECTTCCE-EE--EEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSE
T ss_pred EEEEEEEcCCCEE-EE--EEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcE
Confidence 4556666666654 23 4465543 34899995 9999861 56 5999999999999998751 2466
Q ss_pred eeccccCCCCceeeecCC--Cc--cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCC
Q 023875 182 DLTAFLYPSTGCKFFPSA--GG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 253 (276)
Q Consensus 182 ~L~~l~~~~~~~~~y~sp--g~--~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d 253 (276)
.++.+ .|..+ +. ..+.+++|++... +.. ..+++|..+++|++++++.+++.+
T Consensus 138 ~l~~~--------~y~~~~~~~~~~~e~~~vf~~~~~----------~~~--~~~~~Ev~~~~wv~~~el~~~l~~ 193 (235)
T 2dho_A 138 YLTRI--------HYKAQSDGIWGEHEIDYILLVRMN----------VTL--NPDPNEIKSYCYVSKEELKELLKK 193 (235)
T ss_dssp EEEEE--------EEEEECSSSBEEEEEEEEEEEECC----------CCC--CCCTTTEEEEEEECHHHHHHHHHH
T ss_pred EEEEE--------EEeccCCCccceeEEEEEEEEEEC----------CCC--cCChHHEEEEEEEcHHHHHHHHhh
Confidence 66642 23222 22 3456677877632 111 346789999999999999988753
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.05 E-value=3.1e-10 Score=101.53 Aligned_cols=114 Identities=18% Similarity=0.126 Sum_probs=75.4
Q ss_pred EEEEEEEecceeeeccCeeeeeCCC---CeEEEece-eecCCC-----CCCH---HHHHHHHHHHHhCCcccc---ccee
Q 023875 117 RIGFLKFKADIFCKETGQKVRVPTG---RVILELPA-GMLDDD-----KGDF---VGTAVREVEEETGIQLKL---EDMI 181 (276)
Q Consensus 117 ~V~vl~~~~d~~~~~~~rq~R~~~g---~~~wElPa-G~vD~G-----~Es~---~eAA~REL~EETGl~~~~---~~l~ 181 (276)
++.++.++.++.+ .+ |.|.... ...|++|+ |+++.| +|++ .+||+||++||||+.+.. +++.
T Consensus 72 av~v~v~~~~g~l-LL--qrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~ 148 (246)
T 2pny_A 72 AFSVVLFNTKNRI-LI--QQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIV 148 (246)
T ss_dssp EEEEEEECTTCCE-EE--EEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSE
T ss_pred EEEEEEEeCCCEE-EE--EEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccE
Confidence 4556666666654 23 3465443 34799995 999985 1676 999999999999998742 2466
Q ss_pred eeccccCCCCceeeecC--CCc--cCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCC
Q 023875 182 DLTAFLYPSTGCKFFPS--AGG--CDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPD 253 (276)
Q Consensus 182 ~L~~l~~~~~~~~~y~s--pg~--~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d 253 (276)
.++.+ .|.. .+. ..+.+++|++... +.. ..+++|..+++|++++++.+++.+
T Consensus 149 ~l~~~--------~y~~~~~~~~~~~e~~~vf~~~~~----------~~~--~~~~~Ev~~~~wv~~eel~~~l~~ 204 (246)
T 2pny_A 149 FMTIY--------HHKAKSDRIWGEHEICYLLLVRKN----------VTL--NPDPSETKSILYLSQEELWELLER 204 (246)
T ss_dssp EEEEE--------EEEEESSSSBEEEEEEEEEEEECC----------CCC--CCCTTTEEEEEEECHHHHHHHHHH
T ss_pred EEEEE--------EEEecCCCceeeeEEEEEEEEEEC----------CCC--CCChHHeeEEEEEeHHHHHHHHHh
Confidence 66642 2332 222 3456677877532 111 346789999999999999988753
No 72
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.98 E-value=1.4e-09 Score=99.48 Aligned_cols=110 Identities=18% Similarity=0.149 Sum_probs=62.8
Q ss_pred eEEEeceeecCCCCCCHHHHHHHHHHHHhCCccccc---------ceeeeccccCCCCceeeecCCCccCe---EEEEEE
Q 023875 143 VILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLE---------DMIDLTAFLYPSTGCKFFPSAGGCDE---EISLFL 210 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~---------~l~~L~~l~~~~~~~~~y~spg~~~e---~i~lfl 210 (276)
..|+||||+||+| |++.+||+||++||||+.+... .+..+.....-......+..|+..++ ...+|+
T Consensus 150 g~W~lPGG~Ve~G-Es~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~ 228 (292)
T 1q33_A 150 GEWAIPGGMVDPG-EKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVN 228 (292)
T ss_dssp CSEECCCEECCTT-CCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEE
T ss_pred CcEeCCCcccCCC-CCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEE
Confidence 4799999999998 9999999999999999984210 22222210000000012333433332 123344
Q ss_pred EEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcCChhHHHH
Q 023875 211 YRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTPDAKVLTA 259 (276)
Q Consensus 211 a~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~d~ktl~a 259 (276)
+... ..+.+ +... ....+|..+++|++++++.++..+.+.+..
T Consensus 229 ~~~~-~g~~~----~~~~-~~~~~E~~~~~W~~~del~~L~~~h~~il~ 271 (292)
T 1q33_A 229 YHDE-TGEIM----DNLM-LEAGDDAGKVKWVDINDKLKLYASHSQFIK 271 (292)
T ss_dssp EEES-SSTTT----TTCC-CCCCTTCSEEEEEECCTTCCCSTTHHHHHH
T ss_pred EEeC-CCccc----cccc-cCCCCccceEEEEEcccCcccCHhHHHHHH
Confidence 4321 11100 1111 235678899999999999987666554433
No 73
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.81 E-value=1e-08 Score=96.53 Aligned_cols=101 Identities=18% Similarity=0.040 Sum_probs=61.9
Q ss_pred EEEEecceeeeccCeeeeeCCC--CeEEEeceeecCCCCCCHHHHHHHHHHHHhCCcccccceeeeccccCCCCceeeec
Q 023875 120 FLKFKADIFCKETGQKVRVPTG--RVILELPAGMLDDDKGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFP 197 (276)
Q Consensus 120 vl~~~~d~~~~~~~rq~R~~~g--~~~wElPaG~vD~G~Es~~eAA~REL~EETGl~~~~~~l~~L~~l~~~~~~~~~y~ 197 (276)
+|..+.++.+ .+.+ |...+ ...|+||+|.+|.| ++++|+.||++||||+.+.. ...++. ..+.
T Consensus 245 ~vi~~~~g~v-LL~r--R~~~g~~~GlWefPGG~ve~g--t~~~al~REl~EE~Gl~v~~--~~~l~~--------~~h~ 309 (369)
T 3fsp_A 245 AVLADDEGRV-LIRK--RDSTGLLANLWEFPSCETDGA--DGKEKLEQMVGEQYGLQVEL--TEPIVS--------FEHA 309 (369)
T ss_dssp EEEECSSSEE-EEEE--CCSSSTTTTCEECCEEECSSS--CTHHHHHHHHTTSSSCCEEE--CCCCCE--------EEEE
T ss_pred EEEEeCCCEE-EEEE--CCCCCCcCCcccCCCcccCCC--CcHHHHHHHHHHHhCCceee--eccccc--------EEEE
Confidence 3334444444 2444 44333 35899999999985 89999999999999999863 233332 1222
Q ss_pred CCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC
Q 023875 198 SAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP 252 (276)
Q Consensus 198 spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~ 252 (276)
.+.. .-.+++|.++.. + ...|..++.|++++++.++..
T Consensus 310 ~~h~-~~~~~~~~~~~~----------~------~~~e~~~~~Wv~~~el~~~~l 347 (369)
T 3fsp_A 310 FSHL-VWQLTVFPGRLV----------H------GGPVEEPYRLAPEDELKAYAF 347 (369)
T ss_dssp CSSE-EEEEEEEEEEEC----------C------SSCCCTTEEEEEGGGGGGSCC
T ss_pred cceE-EEEEEEEEEEEc----------C------CCCCccccEEeeHHHhhhCCC
Confidence 2211 223444544321 1 134556789999999988643
No 74
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.77 E-value=2.3e-08 Score=88.76 Aligned_cols=33 Identities=33% Similarity=0.464 Sum_probs=29.5
Q ss_pred eEEEeceeecCCCCCC--------------------HHHHHHHHHHHHhCCccc
Q 023875 143 VILELPAGMLDDDKGD--------------------FVGTAVREVEEETGIQLK 176 (276)
Q Consensus 143 ~~wElPaG~vD~G~Es--------------------~~eAA~REL~EETGl~~~ 176 (276)
..|.||||++|++ |+ +..||+||++||||+.+.
T Consensus 40 g~~~fPGG~vd~~-d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 40 GFVAFPGGAADPS-DAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLA 92 (232)
T ss_dssp TCEECSEEECCHH-HHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCS
T ss_pred CcEECCceeEecC-CCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceec
Confidence 4799999999998 65 589999999999999875
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.60 E-value=6.4e-08 Score=83.80 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=67.4
Q ss_pred eEEEeceeecCCCCC-CHHHHHHHHHHHHhCC-cccccceeeeccccCCCCceeeecCCCccCeEEEEEEEEEeehhhHH
Q 023875 143 VILELPAGMLDDDKG-DFVGTAVREVEEETGI-QLKLEDMIDLTAFLYPSTGCKFFPSAGGCDEEISLFLYRGRVDKEII 220 (276)
Q Consensus 143 ~~wElPaG~vD~G~E-s~~eAA~REL~EETGl-~~~~~~l~~L~~l~~~~~~~~~y~spg~~~e~i~lfla~~~~~~~~i 220 (276)
..||||||+||+| | ++++|..|||.||+|+ .+...+ .+.. ..+..| ..-..++|.++.....-..
T Consensus 54 G~weFPGGkVe~g-E~t~e~aL~REl~EElg~~~V~~~~--y~~s--------~~~~yp--~~V~LHfY~crl~~Ge~~~ 120 (214)
T 3kvh_A 54 GLLGFPGGFVDRR-FWSLEDGLNRVLGLGLGCLRLTEAD--YLSS--------HLTEGP--HRVVAHLYARQLTLEQLHA 120 (214)
T ss_dssp SCEECSEEEECTT-TCCHHHHHHHSCCSCC---CCCGGG--EEEE--------EEC------CEEEEEEEEECCHHHHHH
T ss_pred CEEeCCCccCCCC-CCCHHHHHHHHHHHhhCCeeeeeee--eEEE--------EeccCC--CEEEEEEEEEEeeCCccch
Confidence 4699999999999 8 9999999999999997 455323 2322 133333 2345677777543222222
Q ss_pred HHhcCCCCCCCC-CCceEEEEEEchhhHhhh-------cCChhHH-HHHHHHHHHHhCCCCCC
Q 023875 221 MQLQGKETGLRD-HGELIKVRVVPYRELWRT-------TPDAKVL-TAIALYEMASKEELLPS 274 (276)
Q Consensus 221 ~~~~g~~~g~~d-~~E~i~v~wv~leel~~~-------i~d~ktl-~al~l~~~l~~~g~l~~ 274 (276)
.+++... ..| .-|...+.-||+=.+.+- +.++.+- +--.|...|+..|.|+.
T Consensus 121 lE~~A~~--A~d~G~EvlGlvRVPlytl~D~~gGlP~FL~nsFig~ar~qLl~aL~~l~ll~~ 181 (214)
T 3kvh_A 121 VEISAVH--SRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTAKCQLLFALKVLNMMPE 181 (214)
T ss_dssp HHHHHHT--STTBTTTEEEEEEECCCBCTTSSTBHHHHHTSCBCTTHHHHHHHHHHHTTSSCH
T ss_pred hhhcccC--CcccCceecceEEeeeEEeccCCCchhHHHHhhhHHHHHHHHHHHHHHcCCCCH
Confidence 2333221 233 447888888887655433 2222221 33466677788887764
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.55 E-value=3e-07 Score=85.30 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=71.8
Q ss_pred EEEEEEecceeeeccCeeeeeCCCCeEEEeceeecCCCCCCHHHHHHHHHHHHh-CCcccccceeeeccccCCCCceeee
Q 023875 118 IGFLKFKADIFCKETGQKVRVPTGRVILELPAGMLDDDKGDFVGTAVREVEEET-GIQLKLEDMIDLTAFLYPSTGCKFF 196 (276)
Q Consensus 118 V~vl~~~~d~~~~~~~rq~R~~~g~~~wElPaG~vD~G~Es~~eAA~REL~EET-Gl~~~~~~l~~L~~l~~~~~~~~~y 196 (276)
|++|....+.+ .+. + ... |.||||+++.+ ..++|+||++||| |++++ +..|. .+|
T Consensus 186 vgaii~~~g~v--LL~-----~-~~G-W~LPG~~~~~~---~~~~a~RE~~EEttGl~v~---~~~L~---------~v~ 241 (321)
T 3rh7_A 186 LGAVLEQQGAV--FLA-----G-NET-LSLPNCTVEGG---DPARTLAAYLEQLTGLNVT---IGFLY---------SVY 241 (321)
T ss_dssp EEEEEESSSCE--EEB-----C-SSE-EBCCEEEESSS---CHHHHHHHHHHHHHSSCEE---EEEEE---------EEE
T ss_pred EEEEEEECCEE--EEe-----e-CCC-ccCCcccCCCC---hhHHHHHHHHHHhcCCEEe---eceEE---------EEE
Confidence 55665554433 244 2 345 99999877654 3459999999997 99996 45554 367
Q ss_pred cCCCccCeEEEEEEEEEeehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhh-cCChhHHHHHHHHHHHHhCCCCC
Q 023875 197 PSAGGCDEEISLFLYRGRVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRT-TPDAKVLTAIALYEMASKEELLP 273 (276)
Q Consensus 197 ~spg~~~e~i~lfla~~~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~-i~d~ktl~al~l~~~l~~~g~l~ 273 (276)
..+... ....+|.|+.. . ++..+++|+++++|... +.+..+...+..|..-++.|.++
T Consensus 242 ~~~~~~-~~~i~f~~~~~-~-----------------g~~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 242 EDKSDG-RQNIVYHALAS-D-----------------GAPRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp ECTTTC-CEEEEEEEEEC-S-----------------SCCSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSSCC
T ss_pred EcCCCc-eEEEEEEEEeC-C-----------------CCeeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCCCC
Confidence 666532 22234555421 1 11366899999999775 45666666777776666777654
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.07 E-value=2.2e-05 Score=68.28 Aligned_cols=102 Identities=21% Similarity=0.221 Sum_probs=61.6
Q ss_pred EEEeceeecCCCCCCHHHHHHHHHHHHhCC------cccccceeeeccccCCCCceeeecCC----CccCeEEEEEEEEE
Q 023875 144 ILELPAGMLDDDKGDFVGTAVREVEEETGI------QLKLEDMIDLTAFLYPSTGCKFFPSA----GGCDEEISLFLYRG 213 (276)
Q Consensus 144 ~wElPaG~vD~G~Es~~eAA~REL~EETGl------~~~~~~l~~L~~l~~~~~~~~~y~sp----g~~~e~i~lfla~~ 213 (276)
.|+||||.+|+| |+.++|.+|||.||+|. ++. --.+++.++.+..-..+||.- ....|.+.+|+++-
T Consensus 84 ~f~LPGGkle~g-E~~~eaL~REL~EELg~~~~~~~~~e--Ige~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~L 160 (208)
T 3bho_A 84 FFKLPGGELNPG-EDEVEGLKRLMTEILGRQDGVLQDWV--IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQL 160 (208)
T ss_dssp EEECSEEECCTT-CCHHHHHHHHHHHHHCCCC-----CE--EEEEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEEC
T ss_pred cEECCCcccCCC-CCHHHHHHHHHHHHhCCCcCCCccEE--EhheEEEEecCCCCCcCCCCCCcccCchhhheeeeeEec
Confidence 799999999998 99999999999999994 332 123444443333333444431 22457888888753
Q ss_pred eehhhHHHHhcCCCCCCCCCCceEEEEEEchhhHhhhcC-ChhHHHHH
Q 023875 214 RVDKEIIMQLQGKETGLRDHGELIKVRVVPYRELWRTTP-DAKVLTAI 260 (276)
Q Consensus 214 ~~~~~~i~~~~g~~~g~~d~~E~i~v~wv~leel~~~i~-d~ktl~al 260 (276)
.... ...-....++.-+|+=|+.+-.. -|-+++++
T Consensus 161 p~~~------------~f~vPkn~kL~AvPLfely~N~~~yG~~issi 196 (208)
T 3bho_A 161 QEKA------------LFAVPKNYKLVAAPLFELYDNAPGYGPIISSL 196 (208)
T ss_dssp CSSE------------EEEEETTCEEEEEEHHHHTTCHHHHHHHHTTH
T ss_pred Cccc------------eEecCCCCeEEeecHHhhhcchhhhchhhhhh
Confidence 2111 01111334677788888766432 33344443
Done!