Query 023876
Match_columns 276
No_of_seqs 320 out of 2503
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 14:16:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iqj_A Stromal membrane-associ 100.0 8.4E-37 2.9E-41 234.2 8.0 91 2-96 38-128 (134)
2 2crr_A Stromal membrane-associ 100.0 1.5E-36 5E-41 234.8 6.6 93 2-98 40-132 (141)
3 2olm_A Nucleoporin-like protei 100.0 1.7E-34 5.8E-39 223.0 8.8 95 2-99 36-131 (140)
4 3jue_A Arfgap with coiled-coil 100.0 2.8E-31 9.4E-36 239.9 9.5 96 2-98 56-152 (368)
5 3lju_X ARF-GAP with dual PH do 100.0 7E-31 2.4E-35 238.1 9.8 95 2-98 45-139 (386)
6 2owa_A Arfgap-like finger doma 100.0 9.2E-30 3.2E-34 195.4 5.8 86 2-92 47-132 (138)
7 2crw_A ARF GAP 3, ADP-ribosyla 99.9 6.5E-29 2.2E-33 192.6 4.2 64 2-66 40-104 (149)
8 3dwd_A ADP-ribosylation factor 99.9 7.1E-28 2.4E-32 184.9 8.1 87 2-94 49-144 (147)
9 3sub_A ADP-ribosylation factor 99.9 2.5E-27 8.7E-32 184.3 6.9 65 2-67 33-97 (163)
10 2p57_A GTPase-activating prote 99.9 1.9E-27 6.5E-32 182.7 5.6 63 2-65 48-111 (144)
11 2b0o_E UPLC1; arfgap, structur 99.9 2.2E-26 7.6E-31 202.5 9.7 94 2-96 53-147 (301)
12 1dcq_A PYK2-associated protein 99.9 5.5E-26 1.9E-30 197.8 8.5 94 2-96 28-122 (278)
13 3lvq_E ARF-GAP with SH3 domain 99.9 5E-26 1.7E-30 213.2 6.3 95 2-97 34-129 (497)
14 3o47_A ADP-ribosylation factor 99.8 3.6E-22 1.2E-26 177.7 5.1 63 2-65 48-110 (329)
15 2ep6_A MCTP2 protein; beta san 99.8 6.5E-19 2.2E-23 136.2 10.8 99 161-259 6-105 (133)
16 2fk9_A Protein kinase C, ETA t 99.8 1E-18 3.6E-23 138.8 10.5 97 161-258 22-130 (157)
17 3kwu_A MUNC13-1; calcium bindi 99.8 1E-17 3.4E-22 131.8 14.8 95 162-256 11-117 (148)
18 1rsy_A Synaptotagmin I; calciu 99.8 2.8E-18 9.7E-23 135.7 10.7 114 155-268 29-149 (152)
19 2b3r_A Phosphatidylinositol-4- 99.8 4.3E-18 1.5E-22 132.0 11.2 106 161-267 13-128 (134)
20 2z0u_A WW domain-containing pr 99.8 6.5E-19 2.2E-23 140.0 6.4 103 154-256 29-141 (155)
21 3f04_A Synaptotagmin-1; C2A, c 99.8 2.4E-18 8.3E-23 134.6 9.3 113 155-267 21-140 (143)
22 2dmh_A Myoferlin; beta-sandwic 99.8 9.6E-18 3.3E-22 130.6 12.5 100 166-265 5-108 (140)
23 2d8k_A Synaptotagmin VII; exoc 99.8 5.1E-18 1.7E-22 132.5 10.7 113 155-267 13-133 (141)
24 1ugk_A Synaptotagmin IV, KIAA1 99.7 6.1E-18 2.1E-22 131.6 10.9 115 155-269 9-133 (138)
25 2chd_A Rabphilin-3A, exophilin 99.7 4.2E-18 1.4E-22 133.1 9.1 106 157-262 18-133 (142)
26 3fbk_A RGS3, RGP3, regulator o 99.7 5.7E-18 1.9E-22 134.2 9.9 115 155-269 14-137 (153)
27 1wfj_A Putative elicitor-respo 99.7 8.5E-18 2.9E-22 130.3 10.6 95 163-257 5-101 (136)
28 1gmi_A Protein kinase C, epsil 99.7 7.4E-18 2.5E-22 130.8 10.1 95 164-259 2-109 (136)
29 2dmg_A KIAA1228 protein; beta- 99.7 2.2E-17 7.6E-22 128.9 11.6 113 157-269 13-135 (142)
30 3fdw_A Synaptotagmin-like prot 99.7 3.7E-18 1.3E-22 134.4 6.8 113 156-268 11-133 (148)
31 3rdl_A Protein kinase C alpha 99.7 1.2E-17 4.1E-22 129.5 9.6 101 166-267 14-122 (137)
32 1wfm_A Synaptotagmin XIII; C2 99.7 2.3E-17 8E-22 128.4 10.6 111 156-269 14-132 (138)
33 2bwq_A Regulating synaptic mem 99.7 1.3E-17 4.4E-22 128.0 8.7 99 160-258 10-120 (129)
34 2q3x_A Regulating synaptic mem 99.7 1.1E-17 3.8E-22 135.0 8.4 103 166-268 28-138 (171)
35 1rlw_A Phospholipase A2, CALB 99.7 2.3E-17 7.8E-22 126.1 9.7 100 167-267 2-109 (126)
36 1v27_A Regulating synaptic mem 99.7 1.1E-17 3.8E-22 130.3 8.1 113 155-268 8-132 (141)
37 3m7f_B E3 ubiquitin-protein li 99.7 5.2E-17 1.8E-21 131.6 12.3 97 165-261 5-108 (176)
38 1rh8_A Piccolo protein; beta-s 99.7 1.1E-17 3.9E-22 130.5 7.9 102 167-268 17-137 (142)
39 3b7y_A E3 ubiquitin-protein li 99.7 5.5E-17 1.9E-21 128.3 11.6 96 165-260 17-119 (153)
40 2nq3_A Itchy homolog E3 ubiqui 99.7 5.6E-17 1.9E-21 131.1 11.8 93 166-259 34-127 (173)
41 2cm5_A Rabphilin-3A; protein t 99.7 4.6E-17 1.6E-21 130.6 10.8 102 155-256 24-134 (166)
42 2enp_A B/K protein; C2 type 1, 99.7 1.5E-17 5.2E-22 130.7 7.8 112 155-266 13-138 (147)
43 1tjx_A Similar to synaptotagmi 99.7 6.1E-17 2.1E-21 129.0 10.9 101 155-255 12-121 (159)
44 3pyc_A E3 ubiquitin-protein li 99.7 1.2E-16 4E-21 123.3 12.1 89 167-256 4-98 (132)
45 1a25_A CALB, protein kinase C 99.7 5.3E-17 1.8E-21 127.9 10.3 92 167-258 30-129 (149)
46 3n5a_A Synaptotagmin-7; calciu 99.7 2.4E-17 8.3E-22 127.8 8.1 98 159-256 7-113 (138)
47 1w15_A Synaptotagmin IV; metal 99.7 8.7E-17 3E-21 127.2 10.2 98 157-254 19-125 (153)
48 2cjt_A UNC-13 homolog A, MUNC1 99.6 1.1E-15 3.9E-20 117.8 9.8 89 166-259 3-92 (131)
49 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.3E-15 4.5E-20 132.2 11.0 113 155-267 6-125 (284)
50 2cjs_A UNC-13 homolog A, MUNC1 99.6 3.3E-15 1.1E-19 119.9 9.5 89 166-259 12-101 (167)
51 1dqv_A Synaptotagmin III; beta 99.6 6.3E-15 2.2E-19 128.9 12.0 102 155-256 7-116 (296)
52 3nsj_A Perforin-1; pore formin 99.6 8.7E-15 3E-19 137.3 11.9 86 167-253 393-481 (540)
53 3jzy_A Intersectin 2; C2 domai 99.6 1.6E-14 5.5E-19 135.3 11.8 95 166-260 385-481 (510)
54 2r83_A Synaptotagmin-1; C2A-C2 99.5 5.5E-14 1.9E-18 122.0 10.7 96 161-256 143-247 (284)
55 3l9b_A Otoferlin; C2-domain, b 99.5 1.6E-13 5.3E-18 105.5 9.2 90 169-262 22-115 (144)
56 1cjy_A CPLA2, protein (cytosol 99.5 7.4E-14 2.5E-18 135.0 8.4 100 166-266 16-123 (749)
57 1dqv_A Synaptotagmin III; beta 99.4 3.1E-14 1.1E-18 124.5 4.2 98 160-257 144-250 (296)
58 1djx_A PLC-D1, phosphoinositid 99.4 6.9E-13 2.4E-17 126.8 12.6 95 166-260 495-599 (624)
59 3pfq_A PKC-B, PKC-beta, protei 99.3 5E-12 1.7E-16 122.4 9.0 94 166-259 170-271 (674)
60 3bxj_A RAS GTPase-activating p 99.3 4.2E-13 1.4E-17 125.0 -0.3 99 166-268 9-115 (483)
61 3qr0_A Phospholipase C-beta (P 99.0 6.4E-10 2.2E-14 108.7 10.9 88 167-261 649-747 (816)
62 3ohm_B 1-phosphatidylinositol- 99.0 5.1E-10 1.7E-14 110.0 9.9 88 168-262 725-822 (885)
63 2zkm_X 1-phosphatidylinositol- 99.0 1.3E-09 4.6E-14 106.7 10.1 89 166-261 676-775 (799)
64 1yrk_A NPKC-delta, protein kin 98.4 2.3E-06 7.8E-11 63.8 8.9 87 167-258 5-97 (126)
65 2enj_A NPKC-theta, protein kin 98.2 2.5E-06 8.5E-11 64.5 6.6 89 165-258 7-102 (138)
66 3l4c_A Dedicator of cytokinesi 91.1 3.9 0.00013 33.3 11.8 54 200-253 78-138 (220)
67 2wxf_A Phosphatidylinositol-4, 86.8 4.8 0.00016 40.1 11.2 90 164-255 213-324 (940)
68 3hhm_A Phosphatidylinositol-4, 84.4 6.7 0.00023 39.6 10.9 91 164-255 351-455 (1091)
69 1e7u_A Phosphatidylinositol 3- 78.4 14 0.00046 36.9 10.6 92 164-255 214-330 (961)
70 2y3a_A Phosphatidylinositol-4, 58.5 19 0.00064 36.4 6.9 90 164-255 349-470 (1092)
71 2yrb_A Protein fantom; beta sa 46.6 20 0.00067 27.5 3.8 89 168-258 18-119 (156)
72 4hfx_A Transcription elongatio 37.7 29 0.001 24.2 3.3 64 21-87 8-75 (97)
73 1ovx_A ATP-dependent CLP prote 28.3 16 0.00055 23.7 0.6 11 10-20 39-49 (67)
74 4glq_A Methyl-accepting chemot 27.7 21 0.0007 27.3 1.2 30 37-67 131-160 (171)
75 2ds5_A CLPX, ATP-dependent CLP 27.1 18 0.0006 22.1 0.6 11 10-20 32-42 (51)
76 2vut_I AREA, nitrogen regulato 24.1 40 0.0014 19.6 1.7 25 2-26 13-37 (43)
77 2han_A Protein ultraspiracle; 22.8 35 0.0012 23.5 1.5 17 6-22 22-38 (93)
78 1lo1_A Steroid hormone recepto 22.7 35 0.0012 23.8 1.5 17 6-22 16-32 (98)
79 2han_B Ecdysone receptor; tran 22.7 34 0.0012 24.8 1.5 17 6-22 20-36 (119)
80 1cit_A NGFI-B, protein (orphan 22.6 36 0.0012 23.3 1.5 17 6-22 12-28 (89)
81 1dsz_A RAR-alpha, retinoic aci 22.5 28 0.00095 23.6 0.9 17 6-22 16-32 (86)
82 1a6y_A Orphan nuclear receptor 22.1 37 0.0013 23.5 1.5 17 6-22 19-35 (94)
83 1hcq_A Protein (estrogen recep 21.9 38 0.0013 22.9 1.5 17 6-22 16-32 (84)
84 1r4i_A Androgen receptor; AR, 20.8 37 0.0013 24.0 1.4 17 6-22 19-35 (105)
85 3cbb_A HNF-4-alpha, hepatocyte 20.3 33 0.0011 22.8 0.9 16 7-22 13-28 (78)
No 1
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=234.18 Aligned_cols=91 Identities=48% Similarity=0.869 Sum_probs=84.9
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCCCCCCCCCCCHHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPSPNSFIDERS 81 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (276)
|+|||+|||||||++||||||+||+|||+||||+||.|++++|+.|+. +||..+|++||+++|..+.+|.++ +.+|
T Consensus 38 P~WaS~n~GvfiC~~CsgiHR~lG~hiS~VkSl~ld~w~~~~l~~m~~-~GN~~an~~~e~~lp~~~~~P~~~---~~~e 113 (134)
T 2iqj_A 38 PRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQE-MGNGKANRLYEAYLPETFRRPQID---PAVE 113 (134)
T ss_dssp CCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTSCCCHHHHHHHHT-CHHHHHHHHHTTTCCSSCCCCCSH---HHHH
T ss_pred CCeEEecCCEEEhHhhhHHHhcCCCCCCceeeccccCCCHHHHHHHHH-HchHHHHHHHHhcCCccCCCCCch---HHHH
Confidence 899999999999999999999999999999999999999999999965 699999999999999887777653 5789
Q ss_pred HHHHHHHhcCccccC
Q 023876 82 DFIRRKYEKLEFFNF 96 (276)
Q Consensus 82 ~fI~~KY~~~~f~~~ 96 (276)
+||++||++++|+..
T Consensus 114 ~fIr~KY~~k~f~~~ 128 (134)
T 2iqj_A 114 GFIRDKYEKKKYMDR 128 (134)
T ss_dssp HHHHHHHTSCTTCCT
T ss_pred HHHHHHHhCCeeeCC
Confidence 999999999999974
No 2
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=234.80 Aligned_cols=93 Identities=45% Similarity=0.826 Sum_probs=86.0
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCCCCCCCCCCCHHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPSPNSFIDERS 81 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (276)
|+|||+|||||||++||||||.||+|||+||||+||.|++++|++|+. +||..+|++||+++|+.+.+|.++ +.+|
T Consensus 40 P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VkSl~ld~w~~~~l~~m~~-~GN~~an~~~e~~lp~~~~~P~~~---~~~e 115 (141)
T 2crr_A 40 PRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQD-MGNTKARLLYEANLPENFRRPQTD---QAVE 115 (141)
T ss_dssp CCSEETTTTEECCHHHHHHHHHHCTTTCCCBCSSSSCCCHHHHHHHHH-THHHHHHHHGGGSCCTTCCCCCSH---HHHH
T ss_pred CCeEEeccCeEEhhhhhHhHhcCCCCCCeeeECCCCCCCHHHHHHHHH-HccHHHHHHHHhcCCcccCCCCch---HHHH
Confidence 899999999999999999999999999999999999999999999976 599999999999999887777653 5789
Q ss_pred HHHHHHHhcCccccCCc
Q 023876 82 DFIRRKYEKLEFFNFDE 98 (276)
Q Consensus 82 ~fI~~KY~~~~f~~~~~ 98 (276)
+||++||++++|+....
T Consensus 116 ~fIr~KY~~k~f~~~~~ 132 (141)
T 2crr_A 116 FFIRDKYEKKKYYDKNA 132 (141)
T ss_dssp HHHHHHHTSCTTCCCGG
T ss_pred HHHHHHHhcCcccCCCc
Confidence 99999999999997543
No 3
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=100.00 E-value=1.7e-34 Score=222.99 Aligned_cols=95 Identities=23% Similarity=0.419 Sum_probs=84.0
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCC-CCCCCCCCCHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGN-LKKPSPNSFIDER 80 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~-~~~p~~~~~~~~~ 80 (276)
|+|||+|||||||++||||||+||+| |+||||+||.|++++|++|+. |||..+|++||+++++. ..+|.+. +.+.+
T Consensus 36 P~WaS~n~GvfiC~~CsgiHR~LG~~-s~VrSl~ld~w~~~~l~~m~~-~GN~~an~~~e~~~~~~~~~~P~~~-d~~~~ 112 (140)
T 2olm_A 36 PTYVNMTVGSFVCTSCSGSLRGLNPP-HRVKSISMTTFTQQEIEFLQK-HGNEVCKQIWLGLFDDRSSAIPDFR-DPQKV 112 (140)
T ss_dssp CCEEETTTTEEECHHHHHHHTTSSSC-CCEEETTTCCCCHHHHHHHHH-CHHHHHHHHHTTTCCTTTSCCCCTT-CHHHH
T ss_pred CCceeeccCEEEchhccchhccCCCc-ceeeecCCCCCCHHHHHHHHH-hccHHHHHHHHhhCCcccCCCCCCC-CHHHH
Confidence 89999999999999999999999996 999999999999999999976 69999999999999764 3445433 45678
Q ss_pred HHHHHHHHhcCccccCCcc
Q 023876 81 SDFIRRKYEKLEFFNFDEQ 99 (276)
Q Consensus 81 ~~fI~~KY~~~~f~~~~~~ 99 (276)
++||++||++++|+.+..+
T Consensus 113 ~~fIr~KYe~k~f~~~~~~ 131 (140)
T 2olm_A 113 KEFLQEKYEKKRWYVPPEQ 131 (140)
T ss_dssp HHHHHHHHTSCTTCCCHHH
T ss_pred HHHHHHHHcCCeeeCCccc
Confidence 8999999999999986554
No 4
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.97 E-value=2.8e-31 Score=239.89 Aligned_cols=96 Identities=43% Similarity=0.737 Sum_probs=90.4
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCC-CCCCCCCCCCHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPG-NLKKPSPNSFIDER 80 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~-~~~~p~~~~~~~~~ 80 (276)
|+|||+|+|||||++||||||+||+|||+||||+||.|++++|+.|+.+ ||..+|++||+.+++ ...||.|+++.++|
T Consensus 56 p~w~s~~~g~~~c~~c~~~hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~-gn~~~n~~~e~~~~~~~~~kp~~~~~~~~r 134 (368)
T 3jue_A 56 PEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCEL-GNVIINQIYEARVEAMAVKKPGPSCSRQEK 134 (368)
T ss_dssp CCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTSCCCHHHHHHHHHS-CHHHHHHHHTTTTTTTTCCCCCTTSCHHHH
T ss_pred CCeEEecCCeEEcHhHHHHHhccCCCcCeeEEeecccccHHHHHHHHHH-ccHHHHHHHHhhcccccCcCCCCCCCHHHH
Confidence 8999999999999999999999999999999999999999999999775 999999999999986 35799999999999
Q ss_pred HHHHHHHHhcCccccCCc
Q 023876 81 SDFIRRKYEKLEFFNFDE 98 (276)
Q Consensus 81 ~~fI~~KY~~~~f~~~~~ 98 (276)
++||++||++++|+..-+
T Consensus 135 e~fIr~KY~~k~f~~~l~ 152 (368)
T 3jue_A 135 EAWIHAKYVEKKFLTKLP 152 (368)
T ss_dssp HHHHHHHHTSCTTCCSCC
T ss_pred HHHHHHHHHhhcccccch
Confidence 999999999999997643
No 5
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.97 E-value=7e-31 Score=238.07 Aligned_cols=95 Identities=41% Similarity=0.723 Sum_probs=91.0
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCCCCCCCCCCCHHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPSPNSFIDERS 81 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (276)
|+|||+|+|||||++||||||+| +|||+||||+||.|++++|+.|+. +||..||++||+++|+.+.+|.++++...|+
T Consensus 45 p~w~s~~~g~~~C~~Csg~hr~l-~his~v~s~~ld~w~~~~~~~~~~-~gN~~~~~~~e~~~~~~~~~p~~~~~~~~~e 122 (386)
T 3lju_X 45 PDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLDAWEEAQVEFMAS-HGNDAARARFESKVPSFYYRPTPSDCQLLRE 122 (386)
T ss_dssp CCEEETTTTEEECHHHHHHHHTC-TTTCCEEETTTSCCCHHHHHHHHH-SSHHHHHHHHTTTCCTTSCCCCTTSCHHHHH
T ss_pred CCeEEecccEEEhhhhchHhhCC-CccceeeeecccCCCHHHHHHHHH-hcchHHHHHHhccCCccCCCCCCccchHHHH
Confidence 89999999999999999999999 999999999999999999999976 5999999999999998888999999999999
Q ss_pred HHHHHHHhcCccccCCc
Q 023876 82 DFIRRKYEKLEFFNFDE 98 (276)
Q Consensus 82 ~fI~~KY~~~~f~~~~~ 98 (276)
+||++||++++|+.++.
T Consensus 123 ~fIr~KY~~~~f~~~~~ 139 (386)
T 3lju_X 123 QWIRAKYERQEFIYPEK 139 (386)
T ss_dssp HHHHHHHTSCTTTSGGG
T ss_pred HEHHhhhCCCEEECCcc
Confidence 99999999999998654
No 6
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=9.2e-30 Score=195.38 Aligned_cols=86 Identities=34% Similarity=0.436 Sum_probs=74.2
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCCCCCCCCCCCHHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPSPNSFIDERS 81 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (276)
|+|||+|||||||++|||+||+||+|||+|||++||.|++++|+.|+. |||..+|++||++.... | +.+..+..+
T Consensus 47 P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~lD~w~~~~l~~m~~-~GN~~an~~~e~~~~~~---~-~~~~~~kY~ 121 (138)
T 2owa_A 47 PTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLDKFTPIQLVRMDI-GGNGRARNYFKQVLGVN---F-SPKTKEYAS 121 (138)
T ss_dssp CCEEETTTTEEECHHHHHHHHTTCTTTCCEEETTTSCCCHHHHHHHHH-CCHHHHHHHHHHHTCTT---C-CGGGCHHHH
T ss_pred CCeEEecCCEEEhHhhhHHHhCCCCCCCeeeecCcCcCCHHHHHHHHh-hccHHHHHHHHHHcCCC---C-CCCHHHHHh
Confidence 999999999999999999999999999999999999999999999965 69999999999964321 1 223345667
Q ss_pred HHHHHHHhcCc
Q 023876 82 DFIRRKYEKLE 92 (276)
Q Consensus 82 ~fI~~KY~~~~ 92 (276)
.|+.+||+++.
T Consensus 122 s~~a~~Y~~kL 132 (138)
T 2owa_A 122 SICGRQYKQIL 132 (138)
T ss_dssp SHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 89999999864
No 7
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.95 E-value=6.5e-29 Score=192.61 Aligned_cols=64 Identities=39% Similarity=0.702 Sum_probs=61.0
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCC-CCHHHHHHHHHcccchhhhhhhhhcCCC
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDE-WTNEQVDALAEMGGNIAVNKKYEAYTPG 66 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~-w~~~~~~~~~~~ggN~~~~~~~~~~~~~ 66 (276)
|+|||+|||||||++|+||||.||+|||+|||++||. |++++|+.|+ .|||..+|++||++...
T Consensus 40 P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~LD~~W~~~~l~~m~-~~GN~~an~~~e~~~~~ 104 (149)
T 2crw_A 40 PSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDSNWSWFQLRCMQ-VGGNASASSFFHQHGCS 104 (149)
T ss_dssp CCCEETTTTEECCHHHHHHHHHHCTTTCCEECSSSCCCCCHHHHHHHH-TTCHHHHHHHHHHHCCC
T ss_pred CCcEEeccCEEEchhcchhhccCCCCCCeeeccccCCCCCHHHHHHHH-HHhhHHHHHHHHhcCCC
Confidence 8999999999999999999999999999999999996 9999999996 57999999999999864
No 8
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=99.94 E-value=7.1e-28 Score=184.87 Aligned_cols=87 Identities=32% Similarity=0.552 Sum_probs=67.5
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCCCCCCCCCCCHHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNLKKPSPNSFIDERS 81 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 81 (276)
|+|||+|||||||++||||||+||+|||+||||+||.|++++|+.|+. |||.++|+|||++.. ..|..+..+|+
T Consensus 49 P~WaS~nlGvfiC~~CSgiHR~LG~hISkVkSl~LD~W~~~el~~m~~-~GN~~an~~~ea~~~-----~~~~~~~~~KY 122 (147)
T 3dwd_A 49 PQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKA-GGNAKFREFLESQED-----YDPCWSLQEKY 122 (147)
T ss_dssp CCEEETTTTEEECHHHHHHHHHHCTTTCCEEESCC--CCHHHHHHHHH-CCHHHHHHHHHTSTT-----CCTTCCHHHHH
T ss_pred CCeEEecccEeEhHhhChHHhcCCCCCCccccccccCCCHHHHHHHHH-HhhHHHHHHHHhCCC-----CCCCCCHHHhh
Confidence 899999999999999999999999999999999999999999999976 699999999999742 12344455443
Q ss_pred ---------HHHHHHHhcCccc
Q 023876 82 ---------DFIRRKYEKLEFF 94 (276)
Q Consensus 82 ---------~fI~~KY~~~~f~ 94 (276)
+-|+++++.+.|.
T Consensus 123 ~s~aA~~Yr~~l~~~~eg~~w~ 144 (147)
T 3dwd_A 123 NSRAAALFRDKVVALAEGREWS 144 (147)
T ss_dssp TSHHHHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHHHHcCCcCC
Confidence 4566666666665
No 9
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=2.5e-27 Score=184.30 Aligned_cols=65 Identities=46% Similarity=0.801 Sum_probs=61.9
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCC
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGN 67 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~ 67 (276)
|+|||+|||||||++||||||+||+|||+||||+||.|++++|+.|.. |||.++|.+||++....
T Consensus 33 P~WaS~nlGvflCi~CSGiHR~LG~hISkVKSltLD~Wt~e~l~~m~~-~GN~~an~~~e~~g~~~ 97 (163)
T 3sub_A 33 PDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIKMDIFTDEQLKYIDK-GGNKKCQTYLENYGISD 97 (163)
T ss_dssp CCEEETTTTEEECHHHHHHHHHTCTTTCCEEETTTCCCCHHHHHHHHH-CCHHHHHHHHHHTTCTT
T ss_pred CCeEEecCCeeEHHhhhHHhcCCCCCCCeeeeccccCcCHHHHHHHHh-hCHHHHHHHHHHcCCcc
Confidence 899999999999999999999999999999999999999999999965 79999999999987654
No 10
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=182.68 Aligned_cols=63 Identities=40% Similarity=0.701 Sum_probs=60.0
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCC-CCHHHHHHHHHcccchhhhhhhhhcCC
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDE-WTNEQVDALAEMGGNIAVNKKYEAYTP 65 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~-w~~~~~~~~~~~ggN~~~~~~~~~~~~ 65 (276)
|+|||+|||||||++||||||+||+|||+|||++||. |++++|+.|+. |||.+||++||++..
T Consensus 48 P~WaS~n~GvfiC~~CsgiHR~LG~hIS~VrSl~LD~~W~~~~l~~m~~-~GN~~an~~~e~~g~ 111 (144)
T 2p57_A 48 PSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDSNWNWFQLRCMQV-GGNANATAFFRQHGC 111 (144)
T ss_dssp CCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSCCCCCHHHHHHHHH-CCHHHHHHHHHHTTC
T ss_pred CCeEEeccCEEEhhhchHHHcCCCCCCCeeeecccCCCCCHHHHHHHHH-hCHHHHHHHHHHcCC
Confidence 8999999999999999999999999999999999996 99999999965 799999999999854
No 11
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=2.2e-26 Score=202.50 Aligned_cols=94 Identities=36% Similarity=0.529 Sum_probs=88.9
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCC-CCCCCCCCCHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGN-LKKPSPNSFIDER 80 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~-~~~p~~~~~~~~~ 80 (276)
|+|||+|+|||+|++|||+||.||+|||+|||++||.|+++++..|.+. ||..+|.+||+.++.. ..+|.+.++...|
T Consensus 53 p~w~s~~~g~~~c~~cs~~hr~lg~~is~v~sl~lD~w~~~~l~~~~~~-GN~~~n~i~E~~l~~~~~~kP~~~s~~~~r 131 (301)
T 2b0o_E 53 PTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLALNM-GNTSFNEVMEAQLPSHGGPKPSAESDMGTR 131 (301)
T ss_dssp CCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTSCCCHHHHHHHHHC-CHHHHHHHHTTTCCSSSCSCCCTTCCHHHH
T ss_pred CCeEEeecCeEEcHHHHHHHHhhCCCcccccccCcCCCCHHHHHHHHHc-CCHHHHHHHHHhhhhccCCCCCCcccHHHH
Confidence 9999999999999999999999999999999999999999999999875 9999999999999875 6799999999999
Q ss_pred HHHHHHHHhcCccccC
Q 023876 81 SDFIRRKYEKLEFFNF 96 (276)
Q Consensus 81 ~~fI~~KY~~~~f~~~ 96 (276)
++||++||++++|...
T Consensus 132 ~~~I~~Ky~~~~f~~~ 147 (301)
T 2b0o_E 132 RDYIMAKYVEHRFARR 147 (301)
T ss_dssp HHHHHHHHTSCTTSCC
T ss_pred HHHHHHHHHhhhhhcc
Confidence 9999999999999863
No 12
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.92 E-value=5.5e-26 Score=197.76 Aligned_cols=94 Identities=34% Similarity=0.517 Sum_probs=88.4
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCCC-CCCCCCCCHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGNL-KKPSPNSFIDER 80 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~~-~~p~~~~~~~~~ 80 (276)
|+|||+|||+|||++|||+||+||+|||+|||++||.|+++++..|.. +||..+|++||+.++... .+|.+.++...+
T Consensus 28 p~w~s~~~g~~~c~~c~~~hr~lg~~is~v~s~~~d~~~~~~l~~~~~-~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~ 106 (278)
T 1dcq_A 28 PTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLDVLGTSELLLAKN-IGNAGFNEIMECCLPSEDPVKPNPGSDMIAR 106 (278)
T ss_dssp CCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTSCCCGGGGHHHHH-SCHHHHHHHHTTTCCSSSCCSCCTTCCHHHH
T ss_pred CCeEEecCCeEEcHHHHHHHhhcCCCcceeeeeecCCCCHHHHHHHHH-cCcHHHHHHHHhhCChhhcCCCCCCCCHHHH
Confidence 899999999999999999999999999999999999999999999976 599999999999998754 489999999999
Q ss_pred HHHHHHHHhcCccccC
Q 023876 81 SDFIRRKYEKLEFFNF 96 (276)
Q Consensus 81 ~~fI~~KY~~~~f~~~ 96 (276)
++||++||+.++|...
T Consensus 107 ~~fI~aKYl~~~f~~~ 122 (278)
T 1dcq_A 107 KDYITAKYMERRYARK 122 (278)
T ss_dssp HHHHHHHHTTCTTSCC
T ss_pred HHHHHHHHHHhhcccc
Confidence 9999999999999864
No 13
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=5e-26 Score=213.23 Aligned_cols=95 Identities=35% Similarity=0.485 Sum_probs=88.8
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCCCC-CCCCCCCCCHHHH
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTPGN-LKKPSPNSFIDER 80 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~-~~~p~~~~~~~~~ 80 (276)
|+|||+|+|||+|++|||+||+||+|||+|||++||.|+++++++|.. +||..+|.+||+.++.. ..+|.+.+....|
T Consensus 34 p~w~s~~~~~~~c~~c~~~hr~lg~~~s~vrsl~ld~w~~~~~~l~~~-~GN~~an~i~E~~lp~~~~~kP~~~s~~~~r 112 (497)
T 3lvq_E 34 PTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLDLLGPSELLLALN-MGNTSFNEVMEAQLPSHGGPKPSAESDMGTR 112 (497)
T ss_dssp CCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTSCCCGGGGTTTTT-CCHHHHHHHHTTTCCSSSCSCCCTTCCHHHH
T ss_pred CCEEEechhHHhHHhhHHHHHhhccccceecccccCCCCHHHHHHHHH-HhhHHHHHHHHhhcccccCCCCCCcCcHHHH
Confidence 999999999999999999999999999999999999999999999976 59999999999999864 4788899999999
Q ss_pred HHHHHHHHhcCccccCC
Q 023876 81 SDFIRRKYEKLEFFNFD 97 (276)
Q Consensus 81 ~~fI~~KY~~~~f~~~~ 97 (276)
++||++||++++|....
T Consensus 113 e~fIraky~~~~f~~~~ 129 (497)
T 3lvq_E 113 RDYIMAKYVEHRFARRC 129 (497)
T ss_dssp HHHHHHHHTTCTTSCCC
T ss_pred HHHHHHHhhcccccccc
Confidence 99999999999998743
No 14
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.85 E-value=3.6e-22 Score=177.74 Aligned_cols=63 Identities=37% Similarity=0.722 Sum_probs=60.4
Q ss_pred CCeEEeccceeEcccchHHHhccCCCcceEEEeccCCCCHHHHHHHHHcccchhhhhhhhhcCC
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNIAVNKKYEAYTP 65 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~~~~~~~~~~~~ 65 (276)
|+|||+|+|||||++|||+||+||+|||+|||++||.|++++|+.|.. +||..+|++||+...
T Consensus 48 ~~~~~~~~~~~~c~~c~~~hr~~~~~~s~v~s~~~~~~~~~~~~~~~~-~gN~~~n~~~e~~~~ 110 (329)
T 3o47_A 48 PQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKA-GGNAKFREFLESQED 110 (329)
T ss_dssp CCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSCCCCHHHHHHHHH-CCHHHHHHHHHTCSS
T ss_pred CCeEEecCCEEEChhhhhhhcccCCCcCEEeeccccCCCHHHHHHHHH-hCcHHHHHHHHhcCC
Confidence 899999999999999999999999999999999999999999999976 699999999998754
No 15
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=6.5e-19 Score=136.22 Aligned_cols=99 Identities=31% Similarity=0.565 Sum_probs=91.7
Q ss_pred hcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECCeeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCC
Q 023876 161 VAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGHQTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTF 239 (276)
Q Consensus 161 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~ 239 (276)
.+|....+.|.|+|++|++|+..+.. .+||||++.++.++.+|+++++++||.|||.|.|.+......|.|+|||++.+
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 56778899999999999999998876 89999999999999999999999999999999999987667899999999999
Q ss_pred CCCceeEEEEEeCccccccc
Q 023876 240 TTDDFMGDAEIDIQPLVTAA 259 (276)
Q Consensus 240 ~~d~~lG~~~l~l~~l~~~~ 259 (276)
++|++||++.++|.++..+.
T Consensus 86 ~~~~~lG~~~i~l~~l~~~~ 105 (133)
T 2ep6_A 86 KPPDFLGKVAIPLLSIRDGQ 105 (133)
T ss_dssp EEEEECCBCEEEGGGCCSSC
T ss_pred CCCCeeEEEEEEHHHccCCC
Confidence 99999999999999997654
No 16
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=138.76 Aligned_cols=97 Identities=18% Similarity=0.367 Sum_probs=85.7
Q ss_pred hcccceeeEEEEEEEeeecCCCCCC-----------CCCCcEEEEEECCee-eccccccCCCCCeEeeEEEEEeeCCCCc
Q 023876 161 VAMVEFVGLIKVNVVKGTNLAVRDV-----------MTSDPYVILALGHQT-VKTRVIKSNLNPVWNESLMLSIPENIPP 228 (276)
Q Consensus 161 ~~~~~~~g~L~V~v~~a~~L~~~~~-----------~~~dpyv~v~l~~~~-~~T~~~~~t~nP~w~e~~~f~~~~~~~~ 228 (276)
.++....|.|.|+|++|++|+.+|. +.+||||++.++++. .+|+++++|+||+|||.|.|.+.. ...
T Consensus 22 ~~~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~ 100 (157)
T 2fk9_A 22 SGTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGH 100 (157)
T ss_dssp --CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECE
T ss_pred chhccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCE
Confidence 4567889999999999999998872 258999999998865 699999999999999999999875 458
Q ss_pred EEEEEEEcCCCCCCceeEEEEEeCcccccc
Q 023876 229 LKVLVYDKDTFTTDDFMGDAEIDIQPLVTA 258 (276)
Q Consensus 229 L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~ 258 (276)
|.|+|||++.+++|++||.+.|+|.++..+
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~ 130 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLRT 130 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHHH
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhcc
Confidence 999999999999999999999999999865
No 17
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.77 E-value=1e-17 Score=131.85 Aligned_cols=95 Identities=33% Similarity=0.586 Sum_probs=85.5
Q ss_pred cccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECCeeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCC-
Q 023876 162 AMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGHQTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTF- 239 (276)
Q Consensus 162 ~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~- 239 (276)
+...+.+.|.|+|++|++|+..+.. .+||||++.++.+..+|+++++++||.|||.|.|.+......|.|+|||++..
T Consensus 11 ~~~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 11 GTSKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp ----CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 4566789999999999999998877 89999999999999999999999999999999999977668999999999986
Q ss_pred ----------CCCceeEEEEEeCcccc
Q 023876 240 ----------TTDDFMGDAEIDIQPLV 256 (276)
Q Consensus 240 ----------~~d~~lG~~~l~l~~l~ 256 (276)
+.+++||++.++|.++.
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~~l~ 117 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVRTLS 117 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGGGCC
T ss_pred cccccccccCCCCccEEEEEEEHHHCc
Confidence 88999999999999984
No 18
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.76 E-value=2.8e-18 Score=135.74 Aligned_cols=114 Identities=25% Similarity=0.350 Sum_probs=96.3
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE---CCeeeccccccCCCCCeEeeEEEEEeeC---CCC
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL---GHQTVKTRVIKSNLNPVWNESLMLSIPE---NIP 227 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l---~~~~~~T~~~~~t~nP~w~e~~~f~~~~---~~~ 227 (276)
+.+.....|....+.|.|+|++|++|+..+.. .+||||++.+ +....+|+++++++||+|||.|.|.+.. ...
T Consensus 29 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 108 (152)
T 1rsy_A 29 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGK 108 (152)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTC
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCC
Confidence 44444566777788999999999999999876 8999999999 4567899999999999999999998854 357
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCccC
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPISM 268 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~~ 268 (276)
.|.|+|||++.++++++||++.++|.++..+.....|..+.
T Consensus 109 ~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 149 (152)
T 1rsy_A 109 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 149 (152)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECB
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECC
Confidence 89999999999999999999999999997766555555544
No 19
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.76 E-value=4.3e-18 Score=131.95 Aligned_cols=106 Identities=18% Similarity=0.264 Sum_probs=89.6
Q ss_pred hcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE-----CCeeeccccccCCCCCeEeeEEEEE-eeC---CCCcEE
Q 023876 161 VAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL-----GHQTVKTRVIKSNLNPVWNESLMLS-IPE---NIPPLK 230 (276)
Q Consensus 161 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~~T~~~~~t~nP~w~e~~~f~-~~~---~~~~L~ 230 (276)
..+....+.|.|+|++|++|+. +.. .+||||++++ +..+.+|+++++++||+|||+|.|. +.. ....|.
T Consensus 13 ~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~ 91 (134)
T 2b3r_A 13 LSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQ 91 (134)
T ss_dssp EEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEE
T ss_pred EEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEE
Confidence 4555667899999999999997 444 8999999998 4567899999999999999999999 653 457899
Q ss_pred EEEEEcCCCCCCceeEEEEEeCccccccccccCCCcc
Q 023876 231 VLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPIS 267 (276)
Q Consensus 231 i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~ 267 (276)
|+|||++.++++++||++.++|.++..+.....|..+
T Consensus 92 ~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L 128 (134)
T 2b3r_A 92 LSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQL 128 (134)
T ss_dssp EEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEEC
T ss_pred EEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEEC
Confidence 9999999999999999999999999876555555444
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.76 E-value=6.5e-19 Score=140.03 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=89.9
Q ss_pred chhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC------eeeccccccCCCCCeEeeEEEEEeeC--
Q 023876 154 SKKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH------QTVKTRVIKSNLNPVWNESLMLSIPE-- 224 (276)
Q Consensus 154 ~~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~------~~~~T~~~~~t~nP~w~e~~~f~~~~-- 224 (276)
.+.+.....|....+.|.|+|++|++|+.++.. .+||||++++.. .+++|+++++|+||+|||+|.|.+..
T Consensus 29 ~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~ 108 (155)
T 2z0u_A 29 ATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPA 108 (155)
T ss_dssp CEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHH
T ss_pred cEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHH
Confidence 344555567777889999999999999999877 899999999954 26899999999999999999999864
Q ss_pred -CCCcEEEEEEEcCCCCCCceeEEEEEeCcccc
Q 023876 225 -NIPPLKVLVYDKDTFTTDDFMGDAEIDIQPLV 256 (276)
Q Consensus 225 -~~~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~ 256 (276)
....|.|+|||++.++++++||++.++|.++.
T Consensus 109 l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 109 LHQKTLRVDVCTTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp HHHCEEEEEEEEECTTSCEEEEEEEEEECTTSC
T ss_pred hCcCEEEEEEEECCCCCCCcEEEEEEEEHHHcc
Confidence 24689999999999999999999999999985
No 21
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.75 E-value=2.4e-18 Score=134.61 Aligned_cols=113 Identities=26% Similarity=0.356 Sum_probs=95.9
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE---CCeeeccccccCCCCCeEeeEEEEEeeC---CCC
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL---GHQTVKTRVIKSNLNPVWNESLMLSIPE---NIP 227 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l---~~~~~~T~~~~~t~nP~w~e~~~f~~~~---~~~ 227 (276)
+.+.....|....+.|.|+|++|++|+..+.. .+||||++.+ +.++.+|+++++++||+|||+|.|.+.. ...
T Consensus 21 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 100 (143)
T 3f04_A 21 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGK 100 (143)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTC
T ss_pred EEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCC
Confidence 34444566777788999999999999998876 8999999999 5568899999999999999999999864 347
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCcc
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPIS 267 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~ 267 (276)
.|.|+|||++.++++++||++.++|.++..+.....|..+
T Consensus 101 ~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 140 (143)
T 3f04_A 101 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDL 140 (143)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEEC
T ss_pred EEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEEC
Confidence 8999999999999999999999999999876655555444
No 22
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=9.6e-18 Score=130.64 Aligned_cols=100 Identities=24% Similarity=0.404 Sum_probs=88.6
Q ss_pred eeeEEEEEEEeeecCCCCCCCCCCcEEEEEECCeeeccccccCCCCCeEeeEEEEEeeC----CCCcEEEEEEEcCCCCC
Q 023876 166 FVGLIKVNVVKGTNLAVRDVMTSDPYVILALGHQTVKTRVIKSNLNPVWNESLMLSIPE----NIPPLKVLVYDKDTFTT 241 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~T~~~~~t~nP~w~e~~~f~~~~----~~~~L~i~v~d~~~~~~ 241 (276)
..+.|.|+|++|++|+..+.+.+||||+++++.++++|+++++++||+|||.|.|.+.. ....|.|+|||++.+++
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~ 84 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQ 84 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSS
T ss_pred CCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCC
Confidence 45789999999999999887789999999999999999999999999999999999864 35789999999999999
Q ss_pred CceeEEEEEeCccccccccccCCC
Q 023876 242 DDFMGDAEIDIQPLVTAARACETP 265 (276)
Q Consensus 242 d~~lG~~~l~l~~l~~~~~~~~~~ 265 (276)
|++||++.++|.++..+.....|.
T Consensus 85 ~~~lG~~~i~l~~l~~~~~~~~w~ 108 (140)
T 2dmh_A 85 NKLIGTATVALKDLTGDQSRSLPY 108 (140)
T ss_dssp CCCCEEEEEEGGGTCSSSCEEEEE
T ss_pred CceEEEEEEEHHHhccCCCceeEE
Confidence 999999999999997765544443
No 23
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=5.1e-18 Score=132.49 Aligned_cols=113 Identities=25% Similarity=0.321 Sum_probs=94.1
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEEC---CeeeccccccCCCCCeEeeEEEEEeeC----CC
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALG---HQTVKTRVIKSNLNPVWNESLMLSIPE----NI 226 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~---~~~~~T~~~~~t~nP~w~e~~~f~~~~----~~ 226 (276)
+.+.....|....+.|.|+|++|++|+..+.. .+||||++.+. .+..+|+++++++||+|||.|.|.+.. ..
T Consensus 13 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~ 92 (141)
T 2d8k_A 13 GRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQ 92 (141)
T ss_dssp CEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTT
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHccc
Confidence 33444556777788999999999999999876 89999999993 467899999999999999999998532 35
Q ss_pred CcEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCcc
Q 023876 227 PPLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPIS 267 (276)
Q Consensus 227 ~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~ 267 (276)
..|.|+|||++.++++++||++.++|.++..+.....|..+
T Consensus 93 ~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 133 (141)
T 2d8k_A 93 RILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDL 133 (141)
T ss_dssp SEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECC
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEEC
Confidence 78999999999999999999999999999876644444443
No 24
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=6.1e-18 Score=131.55 Aligned_cols=115 Identities=24% Similarity=0.340 Sum_probs=93.5
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCC--CCCCcEEEEEEC---CeeeccccccCCCCCeEeeEEEEE-eeC---C
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDV--MTSDPYVILALG---HQTVKTRVIKSNLNPVWNESLMLS-IPE---N 225 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~--~~~dpyv~v~l~---~~~~~T~~~~~t~nP~w~e~~~f~-~~~---~ 225 (276)
+.+.....|....+.|.|+|++|++|+.++. ..+||||++.+. .+..+|+++++++||+|||.|.|. +.. .
T Consensus 9 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~ 88 (138)
T 1ugk_A 9 GTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQ 88 (138)
T ss_dssp CEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGG
T ss_pred EEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhc
Confidence 3344445666778899999999999999886 379999999994 468899999999999999999996 653 2
Q ss_pred CCcEEEEEEEcCCCCCCceeEEEEEeCccccccccccC-CCccCC
Q 023876 226 IPPLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACE-TPISMS 269 (276)
Q Consensus 226 ~~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~-~~~~~~ 269 (276)
...|.|+|||++.++++++||++.++|.++..+..... +..+..
T Consensus 89 ~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 89 ELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp GCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 46899999999999999999999999999987654433 344433
No 25
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=4.2e-18 Score=133.11 Aligned_cols=106 Identities=25% Similarity=0.464 Sum_probs=90.3
Q ss_pred hhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC-----eeeccccccCCCCCeEeeEEEEE-eeCC---C
Q 023876 157 ANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH-----QTVKTRVIKSNLNPVWNESLMLS-IPEN---I 226 (276)
Q Consensus 157 ~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~~T~~~~~t~nP~w~e~~~f~-~~~~---~ 226 (276)
+.....|....+.|.|+|++|++|+..+.. .+||||++.+.. ...+|+++++++||+|||.|.|. +... .
T Consensus 18 l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~ 97 (142)
T 2chd_A 18 LEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQR 97 (142)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHH
T ss_pred EEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccC
Confidence 334456666788999999999999999876 899999999954 67899999999999999999998 5431 3
Q ss_pred CcEEEEEEEcCCCCCCceeEEEEEeCcccccccccc
Q 023876 227 PPLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARAC 262 (276)
Q Consensus 227 ~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~ 262 (276)
..|.|+|||++.++++++||++.++|.++..+....
T Consensus 98 ~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~ 133 (142)
T 2chd_A 98 KTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKN 133 (142)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEE
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccE
Confidence 689999999999999999999999999998766444
No 26
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.74 E-value=5.7e-18 Score=134.17 Aligned_cols=115 Identities=16% Similarity=0.309 Sum_probs=94.2
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCCCCCcEEEEEE-----CCeeeccccccCCCCCeEeeEEEEEee--CCCC
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL-----GHQTVKTRVIKSNLNPVWNESLMLSIP--ENIP 227 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l-----~~~~~~T~~~~~t~nP~w~e~~~f~~~--~~~~ 227 (276)
+.+.....|....+.|.|+|++|++|+..+.+.+||||++.+ ...+.+|+++++++||+|||+|.|.+. ....
T Consensus 14 G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~ 93 (153)
T 3fbk_A 14 GAGQLRLSIDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQK 93 (153)
T ss_dssp CCCEEEEEEEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTS
T ss_pred CEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCC
Confidence 444555678888999999999999999998558999999998 345789999999999999999999984 3445
Q ss_pred cEEEEEEEcCCCCC-CceeEEEEEeCccccc-cccccCCCccCC
Q 023876 228 PLKVLVYDKDTFTT-DDFMGDAEIDIQPLVT-AARACETPISMS 269 (276)
Q Consensus 228 ~L~i~v~d~~~~~~-d~~lG~~~l~l~~l~~-~~~~~~~~~~~~ 269 (276)
.|.|+|||++.+++ |++||++.++|.++.. ......|..+..
T Consensus 94 ~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 94 RLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred EEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 69999999999887 9999999999999975 444444544443
No 27
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.74 E-value=8.5e-18 Score=130.30 Aligned_cols=95 Identities=32% Similarity=0.530 Sum_probs=87.3
Q ss_pred ccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECCeeecccccc-CCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCCC
Q 023876 163 MVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGHQTVKTRVIK-SNLNPVWNESLMLSIPENIPPLKVLVYDKDTFT 240 (276)
Q Consensus 163 ~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~~T~~~~-~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~~ 240 (276)
.....+.|.|+|++|++|+..+.. .+||||++.++.++.+|++++ +++||+|||.|.|.+......|.|+|||++.++
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCT
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCC
Confidence 345778999999999999998876 899999999999899999998 899999999999999877789999999999999
Q ss_pred CCceeEEEEEeCccccc
Q 023876 241 TDDFMGDAEIDIQPLVT 257 (276)
Q Consensus 241 ~d~~lG~~~l~l~~l~~ 257 (276)
+|++||++.++|.++..
T Consensus 85 ~d~~lG~~~i~l~~l~~ 101 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFV 101 (136)
T ss_dssp TTCCSEEEEEESHHHHH
T ss_pred CCceEEEEEEEHHHhcc
Confidence 99999999999999853
No 28
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.74 E-value=7.4e-18 Score=130.85 Aligned_cols=95 Identities=20% Similarity=0.452 Sum_probs=84.0
Q ss_pred cceeeEEEEEEEeeecCCCCCCC-C-----------CCcEEEEEECCee-eccccccCCCCCeEeeEEEEEeeCCCCcEE
Q 023876 164 VEFVGLIKVNVVKGTNLAVRDVM-T-----------SDPYVILALGHQT-VKTRVIKSNLNPVWNESLMLSIPENIPPLK 230 (276)
Q Consensus 164 ~~~~g~L~V~v~~a~~L~~~~~~-~-----------~dpyv~v~l~~~~-~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~ 230 (276)
....|.|.|+|++|++|+..+.. . +||||++.++... .+|+++++++||+|||.|.|.+... ..|.
T Consensus 2 ~~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~ 80 (136)
T 1gmi_A 2 VVFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIE 80 (136)
T ss_dssp CCEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEE
T ss_pred cccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEE
Confidence 35678999999999999987743 3 8999999998765 6899999999999999999998765 7899
Q ss_pred EEEEEcCCCCCCceeEEEEEeCccccccc
Q 023876 231 VLVYDKDTFTTDDFMGDAEIDIQPLVTAA 259 (276)
Q Consensus 231 i~v~d~~~~~~d~~lG~~~l~l~~l~~~~ 259 (276)
|+|||++.+++|++||.+.++|.++....
T Consensus 81 ~~V~d~d~~~~dd~iG~~~i~l~~l~~~~ 109 (136)
T 1gmi_A 81 LAVFHDAPIGYDDFVANCTIQFEELLQNG 109 (136)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHTSTT
T ss_pred EEEEeCCCCCCCCEEEEEEEEHHHhcccC
Confidence 99999999999999999999999988643
No 29
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=128.95 Aligned_cols=113 Identities=23% Similarity=0.188 Sum_probs=91.2
Q ss_pred hhhhhcccceeeEEEEEEEeeecCCCCCCCCCCcEEEEEEC-----CeeeccccccCCCCCeEeeEEEEEeeC---CCCc
Q 023876 157 ANSLVAMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILALG-----HQTVKTRVIKSNLNPVWNESLMLSIPE---NIPP 228 (276)
Q Consensus 157 ~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~-----~~~~~T~~~~~t~nP~w~e~~~f~~~~---~~~~ 228 (276)
+.....|....+.|.|+|++|++|+.++...+||||++++. ..+.+|+++++++||+|||+|.|.+.. ....
T Consensus 13 l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 92 (142)
T 2dmg_A 13 IQLTIRHSSQRNKLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRT 92 (142)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCE
T ss_pred EEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCE
Confidence 33345566667899999999999998875459999999992 257899999999999999999999854 2358
Q ss_pred EEEEEEEcCCCCC--CceeEEEEEeCccccccccccCCCccCC
Q 023876 229 LKVLVYDKDTFTT--DDFMGDAEIDIQPLVTAARACETPISMS 269 (276)
Q Consensus 229 L~i~v~d~~~~~~--d~~lG~~~l~l~~l~~~~~~~~~~~~~~ 269 (276)
|.|+|||++.++. +++||++.++|.++........|..+..
T Consensus 93 L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 93 LDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred EEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccC
Confidence 9999999998764 5799999999999876665555655544
No 30
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=3.7e-18 Score=134.44 Aligned_cols=113 Identities=24% Similarity=0.338 Sum_probs=93.9
Q ss_pred hhhhhhcccceeeEEEEEEEeeecCCCCC-CC-CCCcEEEEEEC-----CeeeccccccCCCCCeEeeEEEEEeeCC---
Q 023876 156 KANSLVAMVEFVGLIKVNVVKGTNLAVRD-VM-TSDPYVILALG-----HQTVKTRVIKSNLNPVWNESLMLSIPEN--- 225 (276)
Q Consensus 156 ~~~~~~~~~~~~g~L~V~v~~a~~L~~~~-~~-~~dpyv~v~l~-----~~~~~T~~~~~t~nP~w~e~~~f~~~~~--- 225 (276)
.+.....|....+.|.|+|++|++|+..+ .. .+||||++.+. ..+.+|+++++++||+|||+|.|.+...
T Consensus 11 ~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~ 90 (148)
T 3fdw_A 11 RIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLA 90 (148)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGG
T ss_pred EEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhC
Confidence 34444566677889999999999999887 34 89999999995 3478999999999999999999998653
Q ss_pred CCcEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCccC
Q 023876 226 IPPLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPISM 268 (276)
Q Consensus 226 ~~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~~ 268 (276)
...|.|+|||++.++++++||++.++|.++..+.....|..+.
T Consensus 91 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 133 (148)
T 3fdw_A 91 QRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLH 133 (148)
T ss_dssp GCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECB
T ss_pred ceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECc
Confidence 3469999999999999999999999999998766555555543
No 31
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.73 E-value=1.2e-17 Score=129.49 Aligned_cols=101 Identities=34% Similarity=0.442 Sum_probs=87.2
Q ss_pred eeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE-----CCeeeccccccCCCCCeEeeEEEEEeeC--CCCcEEEEEEEcC
Q 023876 166 FVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL-----GHQTVKTRVIKSNLNPVWNESLMLSIPE--NIPPLKVLVYDKD 237 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~~T~~~~~t~nP~w~e~~~f~~~~--~~~~L~i~v~d~~ 237 (276)
..+.|.|+|++|++|+..+.. .+||||++.+ +....+|++++++.||.|||.|.|.+.. ....|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 568999999999999998877 8999999999 5678899999999999999999999864 3357999999999
Q ss_pred CCCCCceeEEEEEeCccccccccccCCCcc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAARACETPIS 267 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~ 267 (276)
.++++++||++.++|.++.... ...|..+
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L 122 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKL 122 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEEC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEEC
Confidence 9999999999999999997654 3334433
No 32
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=2.3e-17 Score=128.39 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=89.5
Q ss_pred hhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEEC---C-eeeccccccCCCCCeEeeEEEEEeeCC---CC
Q 023876 156 KANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALG---H-QTVKTRVIKSNLNPVWNESLMLSIPEN---IP 227 (276)
Q Consensus 156 ~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~---~-~~~~T~~~~~t~nP~w~e~~~f~~~~~---~~ 227 (276)
.+.....|....+.|.|+|++|++ ++.. .+||||++.+. . ...+|+++++++||+|||+|.|.+... ..
T Consensus 14 ~l~~sl~y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~ 90 (138)
T 1wfm_A 14 KLHYCLDYDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTA 90 (138)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTC
T ss_pred EEEEEEEEeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCC
Confidence 344445666778899999999993 4555 89999999993 2 357999999999999999999998652 46
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCccCC
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPISMS 269 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~~~ 269 (276)
.|.|+|||++.+++|++||++.++|.++..+.....|..+..
T Consensus 91 ~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 91 TLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp EEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 799999999999999999999999999975555555555443
No 33
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=1.3e-17 Score=128.02 Aligned_cols=99 Identities=18% Similarity=0.396 Sum_probs=81.6
Q ss_pred hhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE-----CCeeeccccccCCCCCeEeeEEEEEeeC----CCCcE
Q 023876 160 LVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL-----GHQTVKTRVIKSNLNPVWNESLMLSIPE----NIPPL 229 (276)
Q Consensus 160 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~~T~~~~~t~nP~w~e~~~f~~~~----~~~~L 229 (276)
...|....+.|.|+|++|++|+..+.. .+||||++.+ +..+.+|+++++++||+|||.|.|.+.. ....|
T Consensus 10 ~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l 89 (129)
T 2bwq_A 10 KLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERML 89 (129)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEE
T ss_pred EEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeE
Confidence 345666678999999999999998876 8999999998 4568899999999999999999999532 34689
Q ss_pred EEEEEEcCCCCC--CceeEEEEEeCcccccc
Q 023876 230 KVLVYDKDTFTT--DDFMGDAEIDIQPLVTA 258 (276)
Q Consensus 230 ~i~v~d~~~~~~--d~~lG~~~l~l~~l~~~ 258 (276)
.|+|||++.+++ +++||++.++|.++...
T Consensus 90 ~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~ 120 (129)
T 2bwq_A 90 EITLWDQARVREEESEFLGEILIELETALLD 120 (129)
T ss_dssp EEEEEEC-------CEEEEEEEEEGGGCCCS
T ss_pred EEEEEECCcCcCcCCceeEEEEEEccccCCC
Confidence 999999999987 99999999999998754
No 34
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=1.1e-17 Score=134.98 Aligned_cols=103 Identities=25% Similarity=0.352 Sum_probs=88.0
Q ss_pred eeeEEEEEEEeeecCCCCCC-C-CCCcEEEEEECC-----eeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEE-EcC
Q 023876 166 FVGLIKVNVVKGTNLAVRDV-M-TSDPYVILALGH-----QTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVY-DKD 237 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~-~-~~dpyv~v~l~~-----~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~-d~~ 237 (276)
..+.|.|+|++|++|+.++. . .+||||++.+.. .+.+|+++++++||+|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 57899999999999999984 3 899999999843 378999999999999999999998766678999999 999
Q ss_pred CCCCCceeEEEEEeCccccccccccCCCccC
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAARACETPISM 268 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~~ 268 (276)
.+++|++||++.++|.++..+.....|..+.
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~ 138 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDLSSMVIGWYKLF 138 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCTTSCEEEEEECB
T ss_pred CCCCCCEEEEEEEEHHHcccCCCcceeEECC
Confidence 9999999999999999997655555554443
No 35
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=2.3e-17 Score=126.11 Aligned_cols=100 Identities=24% Similarity=0.422 Sum_probs=85.2
Q ss_pred eeEEEEEEEeeecCCCC---CCC-CCCcEEEEEECC---eeeccccccCCCCCeEeeEEEEEeeC-CCCcEEEEEEEcCC
Q 023876 167 VGLIKVNVVKGTNLAVR---DVM-TSDPYVILALGH---QTVKTRVIKSNLNPVWNESLMLSIPE-NIPPLKVLVYDKDT 238 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~---~~~-~~dpyv~v~l~~---~~~~T~~~~~t~nP~w~e~~~f~~~~-~~~~L~i~v~d~~~ 238 (276)
.+.|.|+|++|++|+.+ +.. .+||||++.++. ..++|+++++++||+|||.|.|.+.. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999984 433 899999999974 78899999999999999999999954 56789999999998
Q ss_pred CCCCceeEEEEEeCccccccccccCCCcc
Q 023876 239 FTTDDFMGDAEIDIQPLVTAARACETPIS 267 (276)
Q Consensus 239 ~~~d~~lG~~~l~l~~l~~~~~~~~~~~~ 267 (276)
++ +++||++.++|.++..+.....+..+
T Consensus 82 ~~-~~~iG~~~i~l~~l~~~~~~~~~~~L 109 (126)
T 1rlw_A 82 VM-DETLGTATFTVSSMKVGEKKEVPFIF 109 (126)
T ss_dssp SC-CEEEEEEEEEGGGSCTTCEEEEEEEE
T ss_pred CC-CceeEEEEEEHHHccCCCcEEEEEEc
Confidence 84 89999999999999876655555444
No 36
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=1.1e-17 Score=130.31 Aligned_cols=113 Identities=16% Similarity=0.301 Sum_probs=91.8
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE-----CCeeeccccccCCCCCeEeeEEEEEe-eC---
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL-----GHQTVKTRVIKSNLNPVWNESLMLSI-PE--- 224 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~~T~~~~~t~nP~w~e~~~f~~-~~--- 224 (276)
+.+.....|....+.|.|+|++|++|+.++.. .+||||++.+ +....+|+++++++||+|||.|.|.+ ..
T Consensus 8 G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~ 87 (141)
T 1v27_A 8 GQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREF 87 (141)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGG
T ss_pred cEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHh
Confidence 33444455666678999999999999999877 8999999998 45688999999999999999999995 32
Q ss_pred CCCcEEEEEEEcCCCCC--CceeEEEEEeCccccccccccCCCccC
Q 023876 225 NIPPLKVLVYDKDTFTT--DDFMGDAEIDIQPLVTAARACETPISM 268 (276)
Q Consensus 225 ~~~~L~i~v~d~~~~~~--d~~lG~~~l~l~~l~~~~~~~~~~~~~ 268 (276)
....|.|+|||++.+++ +++||++.++|.++.... ...|..+.
T Consensus 88 ~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~ 132 (141)
T 1v27_A 88 RERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 132 (141)
T ss_dssp GTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECB
T ss_pred cCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECc
Confidence 34689999999999987 999999999999987543 33344433
No 37
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.72 E-value=5.2e-17 Score=131.60 Aligned_cols=97 Identities=33% Similarity=0.645 Sum_probs=79.4
Q ss_pred ceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC------eeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcC
Q 023876 165 EFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH------QTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKD 237 (276)
Q Consensus 165 ~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~------~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~ 237 (276)
...|.|.|+|++|++|+.++.. .+||||++.++. .+++|+++++++||.|||.|.|.+......|.|+|||++
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d 84 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDEN 84 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECC
Confidence 3468999999999999998876 899999999964 578999999999999999999999876678999999999
Q ss_pred CCCCCceeEEEEEeCccccccccc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAARA 261 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~~ 261 (276)
.+++|++||++.++|.++......
T Consensus 85 ~~~~d~~lG~~~i~l~~l~~~~~~ 108 (176)
T 3m7f_B 85 RLTRDDFLGQVDVPLYPLPTENPR 108 (176)
T ss_dssp ----CEEEEEEEEESCSCCBC---
T ss_pred CCCCCcEEEEEEEEHHHccccCCc
Confidence 999999999999999999876543
No 38
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=1.1e-17 Score=130.52 Aligned_cols=102 Identities=27% Similarity=0.457 Sum_probs=86.8
Q ss_pred eeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC--------------eeeccccccCCCCCeEeeEEEEE-eeC---CCC
Q 023876 167 VGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH--------------QTVKTRVIKSNLNPVWNESLMLS-IPE---NIP 227 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~--------------~~~~T~~~~~t~nP~w~e~~~f~-~~~---~~~ 227 (276)
.+.|.|+|++|++|+..+.. .+||||++.++. .+.+|+++++++||+|||.|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 68999999999999999876 899999999965 25799999999999999999997 542 457
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCccC
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPISM 268 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~~ 268 (276)
.|.|+|||++.++++++||++.++|.++........|..+.
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 137 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLK 137 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECB
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECC
Confidence 89999999999999999999999999987655544454443
No 39
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.71 E-value=5.5e-17 Score=128.31 Aligned_cols=96 Identities=35% Similarity=0.670 Sum_probs=81.6
Q ss_pred ceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC------eeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcC
Q 023876 165 EFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH------QTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKD 237 (276)
Q Consensus 165 ~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~------~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~ 237 (276)
...+.|.|+|++|++|+..+.. .+||||++.++. ...+|+++++++||+|||.|.|.+......|.|+|||++
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d 96 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDEN 96 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECC
Confidence 4567899999999999998876 899999999953 578999999999999999999999876678999999999
Q ss_pred CCCCCceeEEEEEeCcccccccc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAAR 260 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~ 260 (276)
.+++|++||++.++|.++..+..
T Consensus 97 ~~~~d~~iG~~~i~l~~l~~~~~ 119 (153)
T 3b7y_A 97 RLTRDDFLGQVDVPLYPLPTENP 119 (153)
T ss_dssp SSSCCEEEEEEEEECCSCCBCCT
T ss_pred CCcCCCeeEEEEEEHHHcccCCC
Confidence 99999999999999999987654
No 40
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=5.6e-17 Score=131.11 Aligned_cols=93 Identities=19% Similarity=0.403 Sum_probs=82.6
Q ss_pred eeeEEEEEEEeeecCC-CCCCCCCCcEEEEEECCeeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCCCCCce
Q 023876 166 FVGLIKVNVVKGTNLA-VRDVMTSDPYVILALGHQTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTFTTDDF 244 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~-~~~~~~~dpyv~v~l~~~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~~~d~~ 244 (276)
..+.|.|+|++|++|+ ..+.+.+||||++.++.++.+|+++++++||+|||.|.|.+.. ...|.|+|||++.++.|++
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~-~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP-VSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT-TCEEEEEEEECCSSSCCEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC-CCEEEEEEEECCCCCCCce
Confidence 4578999999999999 5555579999999999899999999999999999999999864 7789999999999999999
Q ss_pred eEEEEEeCccccccc
Q 023876 245 MGDAEIDIQPLVTAA 259 (276)
Q Consensus 245 lG~~~l~l~~l~~~~ 259 (276)
||++.++|.++..+.
T Consensus 113 lG~~~i~l~~l~~~~ 127 (173)
T 2nq3_A 113 LGTAALDIYETLKSN 127 (173)
T ss_dssp EEEEEEEHHHHHHHT
T ss_pred EEEEEEEHHHhcccC
Confidence 999999999987543
No 41
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.71 E-value=4.6e-17 Score=130.61 Aligned_cols=102 Identities=27% Similarity=0.379 Sum_probs=88.6
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC-----eeeccccccCCCCCeEeeEEEEEeeC---C
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH-----QTVKTRVIKSNLNPVWNESLMLSIPE---N 225 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~~T~~~~~t~nP~w~e~~~f~~~~---~ 225 (276)
+.+.....|....+.|.|+|++|++|+..+.. .+||||++++.. ...+|+++++++||+|||.|.|.+.. .
T Consensus 24 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 103 (166)
T 2cm5_A 24 GKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLA 103 (166)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred ceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcC
Confidence 33444566777789999999999999998877 899999999954 67899999999999999999999864 2
Q ss_pred CCcEEEEEEEcCCCCCCceeEEEEEeCcccc
Q 023876 226 IPPLKVLVYDKDTFTTDDFMGDAEIDIQPLV 256 (276)
Q Consensus 226 ~~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~ 256 (276)
...|.|+|||++.++++++||++.++|.++.
T Consensus 104 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 104 KKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred CCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 4689999999999999999999999999864
No 42
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=130.71 Aligned_cols=112 Identities=19% Similarity=0.218 Sum_probs=91.0
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCC-C------C-CCCCcEEEEEEC---CeeeccccccCCCCCeEeeEEEEEee
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVR-D------V-MTSDPYVILALG---HQTVKTRVIKSNLNPVWNESLMLSIP 223 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~-~------~-~~~dpyv~v~l~---~~~~~T~~~~~t~nP~w~e~~~f~~~ 223 (276)
+.+.....|....+.|.|+|++|++|+.. + . ..+||||++.+. .++.+|+++++++||+|||+|.|.+.
T Consensus 13 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (147)
T 2enp_A 13 GMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIP 92 (147)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCC
T ss_pred eEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeC
Confidence 33444456777788999999999999984 2 1 278999999995 45789999999999999999999986
Q ss_pred C---CCCcEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCc
Q 023876 224 E---NIPPLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPI 266 (276)
Q Consensus 224 ~---~~~~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~ 266 (276)
. ....|.|+|||++.++++++||++.++|.++........|..
T Consensus 93 ~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~ 138 (147)
T 2enp_A 93 FLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKA 138 (147)
T ss_dssp HHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEEC
T ss_pred hHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEE
Confidence 4 235899999999999999999999999999976655444433
No 43
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=6.1e-17 Score=128.96 Aligned_cols=101 Identities=29% Similarity=0.380 Sum_probs=86.8
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC-----eeeccccccCCCCCeEeeEEEEEeeCC---
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH-----QTVKTRVIKSNLNPVWNESLMLSIPEN--- 225 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~~T~~~~~t~nP~w~e~~~f~~~~~--- 225 (276)
+.+.....|....+.|.|+|++|++|+..+.. .+||||++.+.. ...+|+++++++||+|||.|.|.+...
T Consensus 12 G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~ 91 (159)
T 1tjx_A 12 GDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQ 91 (159)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGG
T ss_pred CeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhC
Confidence 33444556777788999999999999999877 899999999842 468999999999999999999998642
Q ss_pred CCcEEEEEEEcCCCCCCceeEEEEEeCccc
Q 023876 226 IPPLKVLVYDKDTFTTDDFMGDAEIDIQPL 255 (276)
Q Consensus 226 ~~~L~i~v~d~~~~~~d~~lG~~~l~l~~l 255 (276)
...|.|+|||++.++++++||++.+++..+
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 92 KVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp GCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred CcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 457999999999999999999999999865
No 44
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.70 E-value=1.2e-16 Score=123.31 Aligned_cols=89 Identities=21% Similarity=0.427 Sum_probs=79.7
Q ss_pred eeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC--eeeccccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCCCC--
Q 023876 167 VGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH--QTVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTFTT-- 241 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~--~~~~T~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~~~-- 241 (276)
...|.|+|++|++|+..+.. .+||||++.++. +..+|+++++++||+|||.|.|.+... ..|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT-DSITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT-CCEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC-CEEEEEEEECCCCCCCC
Confidence 35799999999999999877 899999999964 788999999999999999999999764 359999999999876
Q ss_pred -CceeEEEEEeCcccc
Q 023876 242 -DDFMGDAEIDIQPLV 256 (276)
Q Consensus 242 -d~~lG~~~l~l~~l~ 256 (276)
|++||++.+++.++.
T Consensus 83 ~d~~lG~~~i~l~~l~ 98 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAIS 98 (132)
T ss_dssp TTTEEEEEEECHHHHH
T ss_pred CCCceEEEEEeHHHhh
Confidence 899999999998873
No 45
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.70 E-value=5.3e-17 Score=127.92 Aligned_cols=92 Identities=37% Similarity=0.506 Sum_probs=83.0
Q ss_pred eeEEEEEEEeeecCCCCCCC-CCCcEEEEEEC-----CeeeccccccCCCCCeEeeEEEEEeeC--CCCcEEEEEEEcCC
Q 023876 167 VGLIKVNVVKGTNLAVRDVM-TSDPYVILALG-----HQTVKTRVIKSNLNPVWNESLMLSIPE--NIPPLKVLVYDKDT 238 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~-----~~~~~T~~~~~t~nP~w~e~~~f~~~~--~~~~L~i~v~d~~~ 238 (276)
.+.|.|+|++|++|+..+.. .+||||++.+. ..+.+|+++++++||+|||+|.|.+.. ....|.|+|||++.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 57899999999999998876 89999999995 467899999999999999999999865 24679999999999
Q ss_pred CCCCceeEEEEEeCcccccc
Q 023876 239 FTTDDFMGDAEIDIQPLVTA 258 (276)
Q Consensus 239 ~~~d~~lG~~~l~l~~l~~~ 258 (276)
++++++||++.++|.++..+
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~ 129 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA 129 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC
T ss_pred CCCCCEEEEEEEEHHHhCcC
Confidence 99999999999999998765
No 46
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.70 E-value=2.4e-17 Score=127.84 Aligned_cols=98 Identities=33% Similarity=0.439 Sum_probs=85.3
Q ss_pred hhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECC-----eeeccccccCCCCCeEeeEEEEEeeCCC---CcE
Q 023876 159 SLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGH-----QTVKTRVIKSNLNPVWNESLMLSIPENI---PPL 229 (276)
Q Consensus 159 ~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~-----~~~~T~~~~~t~nP~w~e~~~f~~~~~~---~~L 229 (276)
....|....+.|.|+|++|++|+..+.. .+||||++++.. .+.+|+++++++||+|||.|.|.+.... ..|
T Consensus 7 ~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l 86 (138)
T 3n5a_A 7 LSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTI 86 (138)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEE
T ss_pred EEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEE
Confidence 3345666778999999999999998877 899999999853 4789999999999999999999986532 579
Q ss_pred EEEEEEcCCCCCCceeEEEEEeCcccc
Q 023876 230 KVLVYDKDTFTTDDFMGDAEIDIQPLV 256 (276)
Q Consensus 230 ~i~v~d~~~~~~d~~lG~~~l~l~~l~ 256 (276)
.|+|||++.+++|++||++.++|.++.
T Consensus 87 ~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 87 IITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred EEEEEECCCCCCCcEEEEEEEccccCC
Confidence 999999999999999999999998754
No 47
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.69 E-value=8.7e-17 Score=127.18 Aligned_cols=98 Identities=27% Similarity=0.360 Sum_probs=80.7
Q ss_pred hhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE--CCe---eeccccccCCCCCeEeeEEEEEeeCC---CC
Q 023876 157 ANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL--GHQ---TVKTRVIKSNLNPVWNESLMLSIPEN---IP 227 (276)
Q Consensus 157 ~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l--~~~---~~~T~~~~~t~nP~w~e~~~f~~~~~---~~ 227 (276)
+.....|....+.|.|+|++|++|+..+.. .+||||++.+ +.. +++|+++++++||+|||+|.|.+... ..
T Consensus 19 l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 98 (153)
T 1w15_A 19 LLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEI 98 (153)
T ss_dssp EEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTE
T ss_pred EEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCce
Confidence 333456666778999999999999998876 8999999998 333 67999999999999999999998653 35
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEeCcc
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEIDIQP 254 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~l~~ 254 (276)
.|.|+|||++.++++++||++.++|.+
T Consensus 99 ~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 99 SVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred EEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 799999999999999999999999987
No 48
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.63 E-value=1.1e-15 Score=117.80 Aligned_cols=89 Identities=25% Similarity=0.343 Sum_probs=74.0
Q ss_pred eeeEEEEEEEeeecCCCCCCCCCCcEEEEEECCeeecccccc-CCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCCCCCce
Q 023876 166 FVGLIKVNVVKGTNLAVRDVMTSDPYVILALGHQTVKTRVIK-SNLNPVWNESLMLSIPENIPPLKVLVYDKDTFTTDDF 244 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~T~~~~-~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~~~d~~ 244 (276)
.++.|.|+|++|++++. .+.+||||++. .+..+|++++ +++||+|||.|.|.+......|.|+|||++ +++|++
T Consensus 3 ~~~~L~V~V~~A~~l~~--~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 77 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA--QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 77 (131)
T ss_dssp CCEEEEEEEEEEECSSC--GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEE
T ss_pred cceEEEEEEEEeECCCC--CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCe
Confidence 35799999999998853 33789999999 3334555554 689999999999999876678999999999 889999
Q ss_pred eEEEEEeCccccccc
Q 023876 245 MGDAEIDIQPLVTAA 259 (276)
Q Consensus 245 lG~~~l~l~~l~~~~ 259 (276)
||++.++|.++....
T Consensus 78 iG~~~i~l~~l~~~~ 92 (131)
T 2cjt_A 78 VGTVWIPLRTIRQSN 92 (131)
T ss_dssp EEEEEEEGGGSCBCS
T ss_pred EEEEEEEHHHhhhcC
Confidence 999999999986543
No 49
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=1.3e-15 Score=132.23 Aligned_cols=113 Identities=26% Similarity=0.344 Sum_probs=94.2
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEEC---CeeeccccccCCCCCeEeeEEEEEeeC---CCC
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALG---HQTVKTRVIKSNLNPVWNESLMLSIPE---NIP 227 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~---~~~~~T~~~~~t~nP~w~e~~~f~~~~---~~~ 227 (276)
+.+.....|....+.|.|+|++|++|+.++.. .+||||++.++ .+..+|+++++++||+|||.|.|.+.. ...
T Consensus 6 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~ 85 (284)
T 2r83_A 6 GKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGK 85 (284)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTC
T ss_pred eEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcC
Confidence 33444456667788999999999999998877 89999999994 357789999999999999999999864 346
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEeCccccccccccCCCcc
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEIDIQPLVTAARACETPIS 267 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~ 267 (276)
.|.|+|||++.++.+++||++.++|.++..+.....|..+
T Consensus 86 ~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L 125 (284)
T 2r83_A 86 TLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDL 125 (284)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEEC
T ss_pred EEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEe
Confidence 8999999999999999999999999999776554444444
No 50
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=3.3e-15 Score=119.88 Aligned_cols=89 Identities=24% Similarity=0.339 Sum_probs=74.7
Q ss_pred eeeEEEEEEEeeecCCCCCCCCCCcEEEEEECCeeecccccc-CCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCCCCCce
Q 023876 166 FVGLIKVNVVKGTNLAVRDVMTSDPYVILALGHQTVKTRVIK-SNLNPVWNESLMLSIPENIPPLKVLVYDKDTFTTDDF 244 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~T~~~~-~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~~~d~~ 244 (276)
.++.|.|+|++|++++. ...+||||++. .+..+|++++ ++.||+|||.|.|.+......|.|+|||++ ++.|++
T Consensus 12 ~~~~L~V~V~~A~~l~~--~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 86 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA--QEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 86 (167)
T ss_dssp CCCEEEEEEEEEECSSC--GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEE
T ss_pred ceEEEEEEEEEEECCCC--CCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCce
Confidence 36799999999998852 33789999999 3345666665 689999999999999876678999999999 889999
Q ss_pred eEEEEEeCccccccc
Q 023876 245 MGDAEIDIQPLVTAA 259 (276)
Q Consensus 245 lG~~~l~l~~l~~~~ 259 (276)
||++.++|.++....
T Consensus 87 iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 87 VGTVWIPLRTIRQSN 101 (167)
T ss_dssp EEEEEEEGGGSCBCS
T ss_pred EEEEEEEHHHhcccC
Confidence 999999999986543
No 51
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.59 E-value=6.3e-15 Score=128.95 Aligned_cols=102 Identities=27% Similarity=0.477 Sum_probs=87.2
Q ss_pred hhhhhhhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE---CCeeeccccccCCCCCeEeeEEEEEeeC---CCC
Q 023876 155 KKANSLVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL---GHQTVKTRVIKSNLNPVWNESLMLSIPE---NIP 227 (276)
Q Consensus 155 ~~~~~~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l---~~~~~~T~~~~~t~nP~w~e~~~f~~~~---~~~ 227 (276)
+.+.....|....+.|.|+|++|++|+.++.. .+||||++++ +.+..+|+++++++||+|||.|.|.+.. ...
T Consensus 7 G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 86 (296)
T 1dqv_A 7 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQR 86 (296)
T ss_dssp CEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSC
T ss_pred eEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCC
Confidence 44445566777789999999999999999877 8999999999 5678899999999999999999999854 245
Q ss_pred cEEEEEEEcCCCCCCceeEEEEEe-Ccccc
Q 023876 228 PLKVLVYDKDTFTTDDFMGDAEID-IQPLV 256 (276)
Q Consensus 228 ~L~i~v~d~~~~~~d~~lG~~~l~-l~~l~ 256 (276)
.|.|+|||++.+++|++||++.++ +.++.
T Consensus 87 ~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~ 116 (296)
T 1dqv_A 87 KLHFSVYDFDRFSRHDLIGQVVLDNLLELA 116 (296)
T ss_dssp CCEEEEEECCSSSCCCEEEEEECCCTTGGG
T ss_pred EEEEEEEEcCCCCCCceEEEEEeccccccc
Confidence 899999999999999999999996 44444
No 52
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.58 E-value=8.7e-15 Score=137.28 Aligned_cols=86 Identities=26% Similarity=0.389 Sum_probs=79.8
Q ss_pred eeEEEEEEEeeecCCCCCCC-CCCcEEEEEECCeeeccccccCCCCCeEeeEEEEEeeC--CCCcEEEEEEEcCCCCCCc
Q 023876 167 VGLIKVNVVKGTNLAVRDVM-TSDPYVILALGHQTVKTRVIKSNLNPVWNESLMLSIPE--NIPPLKVLVYDKDTFTTDD 243 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~~T~~~~~t~nP~w~e~~~f~~~~--~~~~L~i~v~d~~~~~~d~ 243 (276)
++.|.|+|++|++|+. |.. .+||||++.+++++.+|+++++++||+|||.|.|.+.. ....|+|+|||+|.++.||
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD 471 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 471 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCE
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCC
Confidence 7899999999999998 776 89999999999999999999999999999999998642 5678999999999999999
Q ss_pred eeEEEEEeCc
Q 023876 244 FMGDAEIDIQ 253 (276)
Q Consensus 244 ~lG~~~l~l~ 253 (276)
+||++.++|.
T Consensus 472 ~LG~~~~~L~ 481 (540)
T 3nsj_A 472 LLGSCDRSPH 481 (540)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEEEee
Confidence 9999999987
No 53
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.55 E-value=1.6e-14 Score=135.35 Aligned_cols=95 Identities=32% Similarity=0.558 Sum_probs=86.2
Q ss_pred eeeEEEEEEEeeecCCCCCCC-CCCcEEEEEECCeeeccccccCCCCCeEeeEEEEEeeC-CCCcEEEEEEEcCCCCCCc
Q 023876 166 FVGLIKVNVVKGTNLAVRDVM-TSDPYVILALGHQTVKTRVIKSNLNPVWNESLMLSIPE-NIPPLKVLVYDKDTFTTDD 243 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~~~T~~~~~t~nP~w~e~~~f~~~~-~~~~L~i~v~d~~~~~~d~ 243 (276)
..+.|.|+|++|++|+..+.. .+||||++.++..+.+|+++++++||+|||.|.|.+.. ....|.|+|||+|.+++|+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d 464 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDD 464 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCC
Confidence 457899999999999998876 89999999999999999999999999999999999966 4467999999999999999
Q ss_pred eeEEEEEeCcccccccc
Q 023876 244 FMGDAEIDIQPLVTAAR 260 (276)
Q Consensus 244 ~lG~~~l~l~~l~~~~~ 260 (276)
+||++.++|.++..+..
T Consensus 465 ~lG~~~~~l~~l~~~~~ 481 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQE 481 (510)
T ss_dssp EEEEEEEEHHHHHHHHH
T ss_pred ceEEEEEEHHHhccccC
Confidence 99999999999886543
No 54
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.51 E-value=5.5e-14 Score=121.97 Aligned_cols=96 Identities=30% Similarity=0.407 Sum_probs=82.8
Q ss_pred hcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEEC--C---eeeccccccCCCCCeEeeEEEEEeeCC---CCcEEE
Q 023876 161 VAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALG--H---QTVKTRVIKSNLNPVWNESLMLSIPEN---IPPLKV 231 (276)
Q Consensus 161 ~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~--~---~~~~T~~~~~t~nP~w~e~~~f~~~~~---~~~L~i 231 (276)
..+....+.|.|.|++|++|+.++.. .+||||++.+. + .+.+|+++++++||+|||.|.|.+... ...|.|
T Consensus 143 l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i 222 (284)
T 2r83_A 143 LRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVV 222 (284)
T ss_dssp EEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEE
T ss_pred EEecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEE
Confidence 44555678999999999999998877 89999999983 2 467999999999999999999998653 346999
Q ss_pred EEEEcCCCCCCceeEEEEEeCcccc
Q 023876 232 LVYDKDTFTTDDFMGDAEIDIQPLV 256 (276)
Q Consensus 232 ~v~d~~~~~~d~~lG~~~l~l~~l~ 256 (276)
+|||++.++++++||++.+++..+.
T Consensus 223 ~V~d~d~~~~~~~iG~~~i~l~~~~ 247 (284)
T 2r83_A 223 TVLDYDKIGKNDAIGKVFVGYNSTG 247 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEETTCCH
T ss_pred EEEeCCCCCCCcEEEEEEECCCCCC
Confidence 9999999999999999999998753
No 55
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.47 E-value=1.6e-13 Score=105.52 Aligned_cols=90 Identities=13% Similarity=0.236 Sum_probs=80.8
Q ss_pred EEEEEEEeeecCCCCCCCCCCcEEEEEECCeeecccccc-CCCCCeEeeEEEEEeeC---CCCcEEEEEEEcCCCCCCce
Q 023876 169 LIKVNVVKGTNLAVRDVMTSDPYVILALGHQTVKTRVIK-SNLNPVWNESLMLSIPE---NIPPLKVLVYDKDTFTTDDF 244 (276)
Q Consensus 169 ~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~~~~T~~~~-~t~nP~w~e~~~f~~~~---~~~~L~i~v~d~~~~~~d~~ 244 (276)
-|.|.|.+|.+|+. ..|||+++.+.+.+++|++++ ++.||+|||.|.|.+.. ..+.|.|.|+|+++++++.+
T Consensus 22 sL~V~l~~a~~Lpg----~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nrl 97 (144)
T 3l9b_A 22 ALIVHLKTVSELRG----RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNKL 97 (144)
T ss_dssp EEEEEEEEEESCCS----CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCEE
T ss_pred EEEEEEEEecCCCC----CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCCE
Confidence 58899999999984 679999999999999999998 69999999999999854 45789999999999999999
Q ss_pred eEEEEEeCcccccccccc
Q 023876 245 MGDAEIDIQPLVTAARAC 262 (276)
Q Consensus 245 lG~~~l~l~~l~~~~~~~ 262 (276)
||++.++|+++.......
T Consensus 98 IG~~~i~Lq~lv~~~~l~ 115 (144)
T 3l9b_A 98 IGTFRMVLQKVVEENRVE 115 (144)
T ss_dssp EEEEEEESHHHHHHSEEE
T ss_pred EEEEEEEhHHhccCCeEE
Confidence 999999999988765443
No 56
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.46 E-value=7.4e-14 Score=135.02 Aligned_cols=100 Identities=24% Similarity=0.451 Sum_probs=87.2
Q ss_pred eeeEEEEEEEeeecCCC---CCCC-CCCcEEEEEEC---CeeeccccccCCCCCeEeeEEEEEeeC-CCCcEEEEEEEcC
Q 023876 166 FVGLIKVNVVKGTNLAV---RDVM-TSDPYVILALG---HQTVKTRVIKSNLNPVWNESLMLSIPE-NIPPLKVLVYDKD 237 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~---~~~~-~~dpyv~v~l~---~~~~~T~~~~~t~nP~w~e~~~f~~~~-~~~~L~i~v~d~~ 237 (276)
..+.|.|+|++|++|+. ++.. .+||||++.++ ..+.+|+++++++||+|||+|.|.+.. ....|+|+|||++
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 46899999999999998 6655 89999999997 467899999999999999999999976 5678999999999
Q ss_pred CCCCCceeEEEEEeCccccccccccCCCc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAARACETPI 266 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~~~~~~~ 266 (276)
.++ |++||++.++|.++..+.....|..
T Consensus 96 ~~~-ddfIG~v~I~L~~L~~g~~~~~w~~ 123 (749)
T 1cjy_A 96 YVM-DETLGTATFTVSSMKVGEKKEVPFI 123 (749)
T ss_dssp SSS-CEEEEEECCBSTTSCTTCCCCEEEE
T ss_pred CCC-CceeEEEEEEHHHcCCCCceEEEEe
Confidence 998 9999999999999977665544433
No 57
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.45 E-value=3.1e-14 Score=124.53 Aligned_cols=98 Identities=28% Similarity=0.439 Sum_probs=84.5
Q ss_pred hhcccceeeEEEEEEEeeecCCCCCCC-CCCcEEEEEEC--C---eeeccccccCCCCCeEeeEEEEEeeCC---CCcEE
Q 023876 160 LVAMVEFVGLIKVNVVKGTNLAVRDVM-TSDPYVILALG--H---QTVKTRVIKSNLNPVWNESLMLSIPEN---IPPLK 230 (276)
Q Consensus 160 ~~~~~~~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~--~---~~~~T~~~~~t~nP~w~e~~~f~~~~~---~~~L~ 230 (276)
...|....+.|.|.|++|++|+.++.. .+||||++++. + .+.+|+++++++||+|||.|.|.+... ...|.
T Consensus 144 sl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 223 (296)
T 1dqv_A 144 SLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLS 223 (296)
T ss_dssp EEEEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCC
T ss_pred EEEeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEE
Confidence 345555678999999999999998876 78999999995 2 467999999999999999999998652 35799
Q ss_pred EEEEEcCCCCCCceeEEEEEeCccccc
Q 023876 231 VLVYDKDTFTTDDFMGDAEIDIQPLVT 257 (276)
Q Consensus 231 i~v~d~~~~~~d~~lG~~~l~l~~l~~ 257 (276)
|+|||++.++++++||.+.+++..+..
T Consensus 224 i~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 224 IAVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CEEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred EEEEeCCCCCCCceEEEEEECCccCCc
Confidence 999999999999999999999987643
No 58
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.43 E-value=6.9e-13 Score=126.84 Aligned_cols=95 Identities=24% Similarity=0.437 Sum_probs=83.5
Q ss_pred eeeEEEEEEEeeecCCCCCC---CCCCcEEEEEECC-----eeeccccccCC-CCCeEeeEEEEEeeCC-CCcEEEEEEE
Q 023876 166 FVGLIKVNVVKGTNLAVRDV---MTSDPYVILALGH-----QTVKTRVIKSN-LNPVWNESLMLSIPEN-IPPLKVLVYD 235 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~---~~~dpyv~v~l~~-----~~~~T~~~~~t-~nP~w~e~~~f~~~~~-~~~L~i~v~d 235 (276)
..+.|.|+|++|++|+..+. +.+||||+|.+.+ .+.+|++++++ +||+|||+|.|.+... ...|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 45789999999999998873 3899999999932 67899999997 9999999999998753 3679999999
Q ss_pred cCCCCCCceeEEEEEeCcccccccc
Q 023876 236 KDTFTTDDFMGDAEIDIQPLVTAAR 260 (276)
Q Consensus 236 ~~~~~~d~~lG~~~l~l~~l~~~~~ 260 (276)
++.++++++||++.++|..|..+..
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~r 599 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGYR 599 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCcE
Confidence 9999999999999999999987654
No 59
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.29 E-value=5e-12 Score=122.41 Aligned_cols=94 Identities=37% Similarity=0.506 Sum_probs=83.4
Q ss_pred eeeEEEEEEEeeecCCCCCCC-CCCcEEEEEE-----CCeeeccccccCCCCCeEeeEEEEEeeC--CCCcEEEEEEEcC
Q 023876 166 FVGLIKVNVVKGTNLAVRDVM-TSDPYVILAL-----GHQTVKTRVIKSNLNPVWNESLMLSIPE--NIPPLKVLVYDKD 237 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l-----~~~~~~T~~~~~t~nP~w~e~~~f~~~~--~~~~L~i~v~d~~ 237 (276)
..+.|.|+|++|++|+.++.. .+||||++.+ ...+.+|+++++++||.|||.|.|.+.. ....|.|+|||++
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 357899999999999999887 8999999998 4467899999999999999999999864 3456999999999
Q ss_pred CCCCCceeEEEEEeCccccccc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAA 259 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~ 259 (276)
.+++|++||.+.++|.++....
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~ 271 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG 271 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC
T ss_pred cccccccccccccchhhhccCC
Confidence 9999999999999999887543
No 60
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.26 E-value=4.2e-13 Score=124.99 Aligned_cols=99 Identities=13% Similarity=0.202 Sum_probs=12.9
Q ss_pred eeeEEEEEEEeeecCCCCCCCCCCcEEEEEECCe-eeccccccCC---CCCeEeeEEEEEeeCCCCcEEEEEEEc-C---
Q 023876 166 FVGLIKVNVVKGTNLAVRDVMTSDPYVILALGHQ-TVKTRVIKSN---LNPVWNESLMLSIPENIPPLKVLVYDK-D--- 237 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~~-~~~T~~~~~t---~nP~w~e~~~f~~~~~~~~L~i~v~d~-~--- 237 (276)
..+.|.|+|++|++|+.++ ||||++.++++ ..+|++++++ +||+|||.|.|.+......|.|+|||. +
T Consensus 9 ~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKR 84 (483)
T ss_dssp EEECC-------------------------------------------------CCEECC--------------------
T ss_pred eccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccc
Confidence 4568999999999999877 99999999765 5699999999 999999999998655457899999994 4
Q ss_pred CCCCCceeEEEEEeCccccccccccCCCccC
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAARACETPISM 268 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~~~~~~~~~ 268 (276)
..++|++||.+.+++.++..+.....|..+.
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp ----------------------CCEECC---
T ss_pred cCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 3688999999999999998766666665553
No 61
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.05 E-value=6.4e-10 Score=108.66 Aligned_cols=88 Identities=16% Similarity=0.451 Sum_probs=73.9
Q ss_pred eeEEEEEEEeeecCCCCCCCCCCcEEEEEECC-------eeeccccccC-CCCCeEeeE-EEEE-eeC-CCCcEEEEEEE
Q 023876 167 VGLIKVNVVKGTNLAVRDVMTSDPYVILALGH-------QTVKTRVIKS-NLNPVWNES-LMLS-IPE-NIPPLKVLVYD 235 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~-------~~~~T~~~~~-t~nP~w~e~-~~f~-~~~-~~~~L~i~v~d 235 (276)
.+.|.|+|++|++|+.. ..||||+|.+.+ .+++|+++++ ++||+|||. |.|. +.. ....|+|+|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 36899999999999854 579999999843 5679999886 599999998 9998 644 33579999999
Q ss_pred cCCCCCCceeEEEEEeCccccccccc
Q 023876 236 KDTFTTDDFMGDAEIDIQPLVTAARA 261 (276)
Q Consensus 236 ~~~~~~d~~lG~~~l~l~~l~~~~~~ 261 (276)
++ +++||++.++|..|..+...
T Consensus 726 ~d----ddfiG~~~ipL~~L~~GyR~ 747 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPGYRH 747 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCEEEE
T ss_pred cC----CCeeeEEEEEHHHcCCcceE
Confidence 74 78999999999999887654
No 62
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.04 E-value=5.1e-10 Score=110.01 Aligned_cols=88 Identities=19% Similarity=0.443 Sum_probs=73.1
Q ss_pred eEEEEEEEeeecCCCCCCCCCCcEEEEEECC------eeeccccccC-CCCCeEee-EEEEE-eeC-CCCcEEEEEEEcC
Q 023876 168 GLIKVNVVKGTNLAVRDVMTSDPYVILALGH------QTVKTRVIKS-NLNPVWNE-SLMLS-IPE-NIPPLKVLVYDKD 237 (276)
Q Consensus 168 g~L~V~v~~a~~L~~~~~~~~dpyv~v~l~~------~~~~T~~~~~-t~nP~w~e-~~~f~-~~~-~~~~L~i~v~d~~ 237 (276)
..|.|+|++|++|+.. ..||||+|.+.+ .+++|+++++ ++||+||| .|.|. +.. ....|.|+|||++
T Consensus 725 ~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred eEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 4799999999999863 589999999843 3579999986 59999999 69998 643 3457999999987
Q ss_pred CCCCCceeEEEEEeCcccccccccc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTAARAC 262 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~~~~~ 262 (276)
+++||++.++|..|..+..+.
T Consensus 802 ----ddfiG~~~lpL~~L~~GyR~v 822 (885)
T 3ohm_B 802 ----GKFVGHRILPVSAIRSGYHYV 822 (885)
T ss_dssp ----TEEEEEEEEETTTCCCEEEEE
T ss_pred ----ccEEeeEEEEHHHcCCCceEE
Confidence 899999999999998876643
No 63
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.98 E-value=1.3e-09 Score=106.68 Aligned_cols=89 Identities=26% Similarity=0.514 Sum_probs=73.1
Q ss_pred eeeEEEEEEEeeecCCCCCCCCCCcEEEEEE-CC-----eeeccc-cccC-CCCCeEee-EEEE-EeeC-CCCcEEEEEE
Q 023876 166 FVGLIKVNVVKGTNLAVRDVMTSDPYVILAL-GH-----QTVKTR-VIKS-NLNPVWNE-SLML-SIPE-NIPPLKVLVY 234 (276)
Q Consensus 166 ~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l-~~-----~~~~T~-~~~~-t~nP~w~e-~~~f-~~~~-~~~~L~i~v~ 234 (276)
..+.|.|+|++|++|+.. ..||||+|.+ |. ++++|+ ++++ ++||+||| .|.| .+.. ....|.|.||
T Consensus 676 ~~~~L~V~Visa~~L~~~---~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSER---SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCSS---CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCcc---CCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 357899999999999853 5899999998 31 357899 7765 59999999 6999 7754 3357999999
Q ss_pred EcCCCCCCceeEEEEEeCccccccccc
Q 023876 235 DKDTFTTDDFMGDAEIDIQPLVTAARA 261 (276)
Q Consensus 235 d~~~~~~d~~lG~~~l~l~~l~~~~~~ 261 (276)
|++ +++||++.++|..|..+...
T Consensus 753 D~d----~d~iG~~~ipl~~L~~G~r~ 775 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNSGYHH 775 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCCEEEE
T ss_pred EeC----CCccceEeeehhhcCCCcEE
Confidence 986 79999999999999877654
No 64
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.36 E-value=2.3e-06 Score=63.84 Aligned_cols=87 Identities=10% Similarity=0.200 Sum_probs=65.5
Q ss_pred eeEEEEEEEeeecCCCCCCC-CCCcEEEEEECCee----ecc-ccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcCCCC
Q 023876 167 VGLIKVNVVKGTNLAVRDVM-TSDPYVILALGHQT----VKT-RVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTFT 240 (276)
Q Consensus 167 ~g~L~V~v~~a~~L~~~~~~-~~dpyv~v~l~~~~----~~T-~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~~~~ 240 (276)
...|+|.+.++.--+.+... ..||||.+.+.... .+| ...++|..|+||+.|.-.+.+ ...|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE-- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT--
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC--
Confidence 45678877665432222223 68999999985532 244 667779999999999988876 5789999997554
Q ss_pred CCceeEEEEEeCcccccc
Q 023876 241 TDDFMGDAEIDIQPLVTA 258 (276)
Q Consensus 241 ~d~~lG~~~l~l~~l~~~ 258 (276)
+|++.+.+.+++|...
T Consensus 82 --~fvAn~tV~~edL~~~ 97 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAER 97 (126)
T ss_dssp --EEEEEEEEEHHHHHHH
T ss_pred --CeeeEEEEEHHHHHhh
Confidence 8999999999999854
No 65
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.22 E-value=2.5e-06 Score=64.49 Aligned_cols=89 Identities=11% Similarity=0.265 Sum_probs=67.4
Q ss_pred ceeeEEEEEEEeeecCCCCC--CCCCCcEEEEEECCe----eecc-ccccCCCCCeEeeEEEEEeeCCCCcEEEEEEEcC
Q 023876 165 EFVGLIKVNVVKGTNLAVRD--VMTSDPYVILALGHQ----TVKT-RVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKD 237 (276)
Q Consensus 165 ~~~g~L~V~v~~a~~L~~~~--~~~~dpyv~v~l~~~----~~~T-~~~~~t~nP~w~e~~~f~~~~~~~~L~i~v~d~~ 237 (276)
...+.|+|.+.+..-.+.+. ....||||.|.+... ..+| ...++|..|+||+.|.-.+.+ ...|.|.|++..
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a 85 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKN 85 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSS
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCC
Confidence 44567888887765444332 237899999998653 2456 556678999999999988876 578999999644
Q ss_pred CCCCCceeEEEEEeCcccccc
Q 023876 238 TFTTDDFMGDAEIDIQPLVTA 258 (276)
Q Consensus 238 ~~~~d~~lG~~~l~l~~l~~~ 258 (276)
. +|++.+.|.+++|...
T Consensus 86 ~----~fVAn~tV~~edL~~~ 102 (138)
T 2enj_A 86 V----DLISETTVELYSLAER 102 (138)
T ss_dssp C----SCCEEEEEESHHHHHH
T ss_pred C----CeeeEEEEEHHHHHhh
Confidence 3 8999999999999854
No 66
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=91.07 E-value=3.9 Score=33.29 Aligned_cols=54 Identities=15% Similarity=0.275 Sum_probs=40.0
Q ss_pred eeccccccCCCCCeEeeEEEEEeeCC---CCcEEEEEEEcCCC----CCCceeEEEEEeCc
Q 023876 200 TVKTRVIKSNLNPVWNESLMLSIPEN---IPPLKVLVYDKDTF----TTDDFMGDAEIDIQ 253 (276)
Q Consensus 200 ~~~T~~~~~t~nP~w~e~~~f~~~~~---~~~L~i~v~d~~~~----~~d~~lG~~~l~l~ 253 (276)
.++|.+.-++.+|.|+|++.+.++.. ..-|.|++++...- ..+..+|.+.++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 46777888889999999999999762 34588888864321 12347899999974
No 67
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=86.83 E-value=4.8 Score=40.06 Aligned_cols=90 Identities=16% Similarity=0.245 Sum_probs=60.2
Q ss_pred cceeeEEEEEEEeeecCCCCCCCCCCcEEEEEE--CCee----eccccccCCCCCeEeeEEEEEeeC----CCCcEEEEE
Q 023876 164 VEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL--GHQT----VKTRVIKSNLNPVWNESLMLSIPE----NIPPLKVLV 233 (276)
Q Consensus 164 ~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~~----~~T~~~~~t~nP~w~e~~~f~~~~----~~~~L~i~v 233 (276)
.+....+.|+|..+.++...+ ..+-||.+.+ |.+. ..|..+.-..+|.|||.+.|.+.- ....|.|+|
T Consensus 213 ~~~~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti 290 (940)
T 2wxf_A 213 WSLEQPFSIELIEGRKVNADE--RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFAL 290 (940)
T ss_dssp TTCCSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred hhcCCceEEEEEEecccCCCC--CceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEE
Confidence 345568999999999886542 4567777665 5542 344444446789999999998742 356799999
Q ss_pred EEcCCC--C----------CCceeEEEEEeCccc
Q 023876 234 YDKDTF--T----------TDDFMGDAEIDIQPL 255 (276)
Q Consensus 234 ~d~~~~--~----------~d~~lG~~~l~l~~l 255 (276)
|+.... + .+..+|.+.++|-+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 291 YAVVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EEEC----------------CEEEEEEEEESBCT
T ss_pred EEecCCccCccccccccccccceEEEEeeeEECC
Confidence 985321 1 234899999998753
No 68
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=84.42 E-value=6.7 Score=39.55 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=59.8
Q ss_pred cceeeEEEEEEEeeecCCCCCCCCCCcEEEEEE--CCe----eeccccccCCCCCeEeeEEEEEeeC----CCCcEEEEE
Q 023876 164 VEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL--GHQ----TVKTRVIKSNLNPVWNESLMLSIPE----NIPPLKVLV 233 (276)
Q Consensus 164 ~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~----~~~T~~~~~t~nP~w~e~~~f~~~~----~~~~L~i~v 233 (276)
......+.|+|..+.++........+-||.+.+ |.+ ...|..+. ..+|.|||.+.|.+.- ....|.|+|
T Consensus 351 w~~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl 429 (1091)
T 3hhm_A 351 WVINSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSI 429 (1091)
T ss_dssp GGCCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEE
T ss_pred hhCCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEE
Confidence 345568899999988775433224677888777 543 23344333 4578899999998742 456799999
Q ss_pred EEcCCC----CCCceeEEEEEeCccc
Q 023876 234 YDKDTF----TTDDFMGDAEIDIQPL 255 (276)
Q Consensus 234 ~d~~~~----~~d~~lG~~~l~l~~l 255 (276)
|+.... ..+..||.+.++|-+.
T Consensus 430 ~~~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 430 CSVKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCCCC-------CCEEEEEESBCT
T ss_pred EEecCccCcccccceeEEeeeeeEcc
Confidence 985432 1245799999998653
No 69
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=78.39 E-value=14 Score=36.94 Aligned_cols=92 Identities=13% Similarity=0.064 Sum_probs=56.0
Q ss_pred cceeeEEEEEEEeeecCCCCCCCCCCcEEEEEE--CCee---eccccccCCCCCeEeeEEEEEeeC----CCCcEEEEEE
Q 023876 164 VEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL--GHQT---VKTRVIKSNLNPVWNESLMLSIPE----NIPPLKVLVY 234 (276)
Q Consensus 164 ~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~~---~~T~~~~~t~nP~w~e~~~f~~~~----~~~~L~i~v~ 234 (276)
.+....+.|+|..+...........+-||.+.+ |.+. ..|..+.-+.+|.|||.+.|.+.- ....|.|+||
T Consensus 214 w~~~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 293 (961)
T 1e7u_A 214 WDCDRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIY 293 (961)
T ss_dssp SCCCSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred eeccCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEE
Confidence 344567888888775421111114566777655 5542 234444445679999999998742 4567999999
Q ss_pred EcCCC----------------CCCceeEEEEEeCccc
Q 023876 235 DKDTF----------------TTDDFMGDAEIDIQPL 255 (276)
Q Consensus 235 d~~~~----------------~~d~~lG~~~l~l~~l 255 (276)
+.... +....+|.+.++|-+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 294 CGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EEEC--------------------CEEEEEEEESBCT
T ss_pred ecccCccccccccccccccccccceeEEEEeeeeecC
Confidence 74321 1244799999988654
No 70
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=58.47 E-value=19 Score=36.44 Aligned_cols=90 Identities=20% Similarity=0.223 Sum_probs=56.8
Q ss_pred cceeeEEEEEEEeeecCCCCCCCCCCcEEEEEE--CCee----eccccccCCCCCeEeeEEEEEeeC----CCCcEEEEE
Q 023876 164 VEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL--GHQT----VKTRVIKSNLNPVWNESLMLSIPE----NIPPLKVLV 233 (276)
Q Consensus 164 ~~~~g~L~V~v~~a~~L~~~~~~~~dpyv~v~l--~~~~----~~T~~~~~t~nP~w~e~~~f~~~~----~~~~L~i~v 233 (276)
......+.|+|..+.++...+ ..+-||.+.+ |.+. ..|..+.-..+|.|||.+.|.+.- ....|.|+|
T Consensus 349 ~~~~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 349 WDNNNPFQITLVKGNKLNTEE--TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp CCCCSEEEEEECCCCCCCCCS--SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred hhcCCCEEEEEEEeccCCCCC--CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 344568899999988876542 3456665443 6543 345444446789999999998743 345789999
Q ss_pred EEcCCC----------------------CCCceeEEEEEeCccc
Q 023876 234 YDKDTF----------------------TTDDFMGDAEIDIQPL 255 (276)
Q Consensus 234 ~d~~~~----------------------~~d~~lG~~~l~l~~l 255 (276)
|+.... ..+..+|.+.++|-+.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 427 YAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp CCC------------------------------CCEEEEESBCT
T ss_pred EEecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 985210 1123889999998653
No 71
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=46.59 E-value=20 Score=27.47 Aligned_cols=89 Identities=12% Similarity=0.162 Sum_probs=57.0
Q ss_pred eEEEEEEEeeecCCCCC--CCCCCcEEEEEE---CCeeeccccccCCCCCeEeeEEEEEeeC--------CCCcEEEEEE
Q 023876 168 GLIKVNVVKGTNLAVRD--VMTSDPYVILAL---GHQTVKTRVIKSNLNPVWNESLMLSIPE--------NIPPLKVLVY 234 (276)
Q Consensus 168 g~L~V~v~~a~~L~~~~--~~~~dpyv~v~l---~~~~~~T~~~~~t~nP~w~e~~~f~~~~--------~~~~L~i~v~ 234 (276)
+.+.|.|.++.--+..- ....+|..-+.+ .-+...|.++. ..+|.+|-+..|.+.- ....+.|++.
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELh 96 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVH 96 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEE
Confidence 45666666654111100 012466544444 44566666665 7899999988888743 2357889998
Q ss_pred EcCCCCCCceeEEEEEeCcccccc
Q 023876 235 DKDTFTTDDFMGDAEIDIQPLVTA 258 (276)
Q Consensus 235 d~~~~~~d~~lG~~~l~l~~l~~~ 258 (276)
.... +....||.+.|+|.+++..
T Consensus 97 qa~g-~~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 97 QAYS-TEYETIAACQLKFHEILEK 119 (156)
T ss_dssp EECS-SCEEEEEEEEECCSHHHHC
T ss_pred EeeC-CCceEEEEEEEEhHHhhCc
Confidence 7543 3446899999999999854
No 72
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=37.69 E-value=29 Score=24.21 Aligned_cols=64 Identities=22% Similarity=0.368 Sum_probs=31.1
Q ss_pred HhccCCCcceEEEeccCCCCHHHHHHHHHcccch----hhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHH
Q 023876 21 HRSLGVHISKVLSVKLDEWTNEQVDALAEMGGNI----AVNKKYEAYTPGNLKKPSPNSFIDERSDFIRRK 87 (276)
Q Consensus 21 Hr~lg~~~s~v~s~~~d~w~~~~~~~~~~~ggN~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~fI~~K 87 (276)
|.-+|+.++-++-| |..++++++..+... |. -...+|..+....|..-.|.....-|+-|.+-+
T Consensus 8 ~~~~~~Py~lL~PV-Lek~tp~QL~~IE~~--nP~L~~dTdeLWk~~c~rdF~~~~p~e~esWRelY~rl~ 75 (97)
T 4hfx_A 8 HSHMGVPYSVLEPV-LERCTPDQLYRIEEY--NHVLIEETDQLWKVHCHRDFKEERPEEYESWREMYLRLQ 75 (97)
T ss_dssp ------------CC-GGGCCHHHHHHHHTC--------CCHHHHHHHC----CCSCCCSSSCHHHHHHHHH
T ss_pred ccccCCcHHHHHHH-HccCCHHHHHHHHHh--CcccchhhHHHHHHHHHhHCcccCCCCCCCHHHHHHHHH
Confidence 45689998888887 478999999888543 42 356788888766555444555555666665544
No 73
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=28.32 E-value=16 Score=23.68 Aligned_cols=11 Identities=36% Similarity=1.066 Sum_probs=9.5
Q ss_pred ceeEcccchHH
Q 023876 10 GVFICIKCSGI 20 (276)
Q Consensus 10 g~~~C~~C~~~ 20 (276)
|++||.+|...
T Consensus 39 gvyICdeCI~~ 49 (67)
T 1ovx_A 39 SVYICDECVDL 49 (67)
T ss_dssp SCEEEHHHHHH
T ss_pred CCChhHHHHHH
Confidence 89999999864
No 74
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=27.66 E-value=21 Score=27.31 Aligned_cols=30 Identities=10% Similarity=0.178 Sum_probs=21.7
Q ss_pred CCCCHHHHHHHHHcccchhhhhhhhhcCCCC
Q 023876 37 DEWTNEQVDALAEMGGNIAVNKKYEAYTPGN 67 (276)
Q Consensus 37 d~w~~~~~~~~~~~ggN~~~~~~~~~~~~~~ 67 (276)
-.|+++|+++|..+ ++..+-.+-.+.+-..
T Consensus 131 r~w~~~ei~ll~~l-A~ql~iAi~qa~l~~~ 160 (171)
T 4glq_A 131 RQWQEIEIDQFSEL-ASTGSLVLERLHFLEQ 160 (171)
T ss_dssp CCCCHHHHHHHHHH-HHHHHHHHHHHC----
T ss_pred CCCCHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 35999999999887 7888877777776543
No 75
>2ds5_A CLPX, ATP-dependent CLP protease ATP-binding subunit CLPX; treble cleft zinc finger, metal binding protein, protein binding; HET: PG4; 1.50A {Escherichia coli} SCOP: g.39.1.11 PDB: 2ds6_A 2ds8_A 2ds7_A
Probab=27.08 E-value=18 Score=22.09 Aligned_cols=11 Identities=36% Similarity=1.066 Sum_probs=9.4
Q ss_pred ceeEcccchHH
Q 023876 10 GVFICIKCSGI 20 (276)
Q Consensus 10 g~~~C~~C~~~ 20 (276)
|++||.+|...
T Consensus 32 gv~IC~eCi~~ 42 (51)
T 2ds5_A 32 SVYICDECVDL 42 (51)
T ss_dssp SCEEEHHHHHH
T ss_pred CCEehHHHHHH
Confidence 89999999763
No 76
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=24.10 E-value=40 Score=19.63 Aligned_cols=25 Identities=24% Similarity=0.296 Sum_probs=20.7
Q ss_pred CCeEEeccceeEcccchHHHhccCC
Q 023876 2 GDIRSLSTGVFICIKCSGIHRSLGV 26 (276)
Q Consensus 2 p~w~s~~~g~~~C~~C~~~Hr~lg~ 26 (276)
|.|=.-..|-.+|..|.-..+.-|.
T Consensus 13 p~WR~gp~G~~LCNaCGl~~k~~~~ 37 (43)
T 2vut_I 13 PLWRRNPEGQPLCNACGLFLKLHGV 37 (43)
T ss_dssp SCCEECTTSCEECHHHHHHHHHHSS
T ss_pred CccccCCCCCcccHHHHHHHHHhCC
Confidence 6788888899999999988776653
No 77
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=22.83 E-value=35 Score=23.53 Aligned_cols=17 Identities=29% Similarity=0.765 Sum_probs=15.1
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...|||+.|..|++..|
T Consensus 22 g~hyGv~sC~aCk~FFR 38 (93)
T 2han_A 22 GKHYGVYSCEGCKGFFK 38 (93)
T ss_dssp EEETTEEECHHHHHHHH
T ss_pred CeecCcchhHHHHHHHH
Confidence 46899999999999886
No 78
>1lo1_A Steroid hormone receptor ERR2; estrogen related receptor 2, DNA binding domain, HERR2, hormone nuclear receptor; NMR {Homo sapiens} SCOP: g.39.1.2
Probab=22.74 E-value=35 Score=23.83 Aligned_cols=17 Identities=24% Similarity=0.555 Sum_probs=15.3
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...|||+.|..|+++.|
T Consensus 16 g~hyGv~sC~aCk~FFR 32 (98)
T 1lo1_A 16 GYHYGVASCEACKAFFK 32 (98)
T ss_dssp EESSSSEECHHHHHHHH
T ss_pred CeeeCccchhhhhhhhe
Confidence 46899999999999887
No 79
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=22.72 E-value=34 Score=24.77 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=15.4
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...|||+.|..|+++.|
T Consensus 20 g~hyGv~sC~aCk~FFR 36 (119)
T 2han_B 20 GYHYNALTCEGCKGFFR 36 (119)
T ss_dssp EEETTEEECHHHHHHHH
T ss_pred cceECchhHHhhHHhhh
Confidence 46899999999999887
No 80
>1cit_A NGFI-B, protein (orphan nuclear receptor NGFI-B); early immediate response gene product, transcription factor, monomeric protein-DNA complex; HET: DNA; 2.70A {Rattus norvegicus} SCOP: g.39.1.2
Probab=22.59 E-value=36 Score=23.27 Aligned_cols=17 Identities=29% Similarity=0.630 Sum_probs=15.2
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...||++.|..|++..|
T Consensus 12 g~hyGv~sC~aCk~FFR 28 (89)
T 1cit_A 12 CQHYGVRTCEGCKGFFK 28 (89)
T ss_dssp EEETTEEECHHHHHHHH
T ss_pred ceEeCccchhhhhhhce
Confidence 46899999999999886
No 81
>1dsz_A RAR-alpha, retinoic acid receptor alpha; RAR, nuclear receptor, protein-DNA, transcription/DNA complex; HET: DNA; 1.70A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hra_A
Probab=22.46 E-value=28 Score=23.64 Aligned_cols=17 Identities=35% Similarity=0.710 Sum_probs=15.0
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...||++.|..|++..|
T Consensus 16 g~hyGv~sC~aCk~FFR 32 (86)
T 1dsz_A 16 GYHYGVSACEGCKGFFR 32 (86)
T ss_dssp SEETTEECCHHHHHHHH
T ss_pred ceeeCchhHHHHHHHHH
Confidence 35799999999999887
No 82
>1a6y_A Orphan nuclear receptor NR1D1; orphan receptor, DNA-binding, reverb, REV- ERB, transcription regulation, transcription/DNA complex; HET: DNA 5IU; 2.30A {Homo sapiens} SCOP: g.39.1.2 PDB: 1ga5_A* 1hlz_A
Probab=22.06 E-value=37 Score=23.46 Aligned_cols=17 Identities=35% Similarity=0.843 Sum_probs=15.3
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...||++.|..|++..|
T Consensus 19 g~hyGv~sC~aCk~FFR 35 (94)
T 1a6y_A 19 GFHYGVLACEGCKGFFR 35 (94)
T ss_dssp EEETTEEECHHHHHHHH
T ss_pred ceEeCccchhhhhhehh
Confidence 46899999999999887
No 83
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=21.91 E-value=38 Score=22.86 Aligned_cols=17 Identities=24% Similarity=0.657 Sum_probs=15.3
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...||++.|..|++..|
T Consensus 16 g~hyGv~sC~aCk~FFR 32 (84)
T 1hcq_A 16 GYHYGVWSCEGCKAFFK 32 (84)
T ss_dssp EEETTEEECHHHHHHHH
T ss_pred CeeeCccchHHhhhhhh
Confidence 46899999999999887
No 84
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=20.81 E-value=37 Score=24.00 Aligned_cols=17 Identities=18% Similarity=0.475 Sum_probs=15.3
Q ss_pred EeccceeEcccchHHHh
Q 023876 6 SLSTGVFICIKCSGIHR 22 (276)
Q Consensus 6 s~~~g~~~C~~C~~~Hr 22 (276)
...||++.|..|+++.|
T Consensus 19 g~hyGv~sC~aCk~FFR 35 (105)
T 1r4i_A 19 GAHYGALTCGSCKVFFK 35 (105)
T ss_dssp EEETTEEEEHHHHHHHH
T ss_pred ceEeCCcchhhhhhhhc
Confidence 46899999999999887
No 85
>3cbb_A HNF-4-alpha, hepatocyte nuclear factor 4-alpha, DNA binding domain, nuclear; zinc finger; 2.00A {Homo sapiens}
Probab=20.32 E-value=33 Score=22.78 Aligned_cols=16 Identities=31% Similarity=0.590 Sum_probs=14.6
Q ss_pred eccceeEcccchHHHh
Q 023876 7 LSTGVFICIKCSGIHR 22 (276)
Q Consensus 7 ~~~g~~~C~~C~~~Hr 22 (276)
..||++.|..|++..|
T Consensus 13 ~hyGv~sC~aCk~FFR 28 (78)
T 3cbb_A 13 KHYGASSCDGCKGFFR 28 (78)
T ss_dssp EETTEECCHHHHHHHH
T ss_pred eEeCCcchhhhceeee
Confidence 5799999999999887
Done!