Query 023877
Match_columns 276
No_of_seqs 256 out of 1792
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 14:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hl4_A Choline-phosphate cytid 100.0 5E-46 1.7E-50 335.6 15.6 167 14-182 70-236 (236)
2 3elb_A Ethanolamine-phosphate 100.0 2E-33 6.9E-38 265.6 15.2 145 15-162 193-341 (341)
3 3elb_A Ethanolamine-phosphate 100.0 1.5E-31 5.1E-36 252.9 15.9 140 17-160 4-143 (341)
4 2b7l_A Glycerol-3-phosphate cy 99.9 1.7E-23 5.8E-28 170.4 11.5 128 20-158 1-129 (132)
5 1coz_A Protein (glycerol-3-pho 99.9 1.4E-23 4.9E-28 170.0 11.0 126 20-156 1-127 (129)
6 3glv_A Lipopolysaccharide core 99.9 3.9E-22 1.3E-26 165.8 12.2 134 20-160 2-140 (143)
7 3nv7_A Phosphopantetheine aden 99.8 1E-20 3.4E-25 161.0 8.6 130 20-157 2-138 (157)
8 4f3r_A Phosphopantetheine aden 99.8 2.8E-20 9.6E-25 158.8 10.7 131 20-158 5-141 (162)
9 3k9w_A Phosphopantetheine aden 99.8 5.1E-19 1.7E-23 154.4 12.4 132 19-158 21-159 (187)
10 3f3m_A Phosphopantetheine aden 99.8 1.1E-18 3.9E-23 149.7 13.0 131 20-159 3-141 (168)
11 3nbk_A Phosphopantetheine aden 99.8 2.8E-18 9.4E-23 148.9 14.7 131 15-157 16-156 (177)
12 3nd5_A Phosphopantetheine aden 99.8 9.7E-19 3.3E-23 150.5 10.6 130 20-158 2-140 (171)
13 1vlh_A Phosphopantetheine aden 99.8 2.5E-18 8.6E-23 147.2 11.7 127 21-158 13-149 (173)
14 1qjc_A Phosphopantetheine aden 99.7 1.1E-17 3.8E-22 139.0 12.6 127 20-158 1-138 (158)
15 1o6b_A Phosphopantetheine aden 99.7 3.7E-16 1.3E-20 131.9 13.1 129 20-158 2-139 (169)
16 1od6_A PPAT, phosphopantethein 99.7 3.4E-16 1.2E-20 130.4 11.9 128 20-158 1-139 (160)
17 1kam_A Deamido-NAD(+), nicotin 99.7 9.4E-16 3.2E-20 132.4 14.1 133 21-158 8-171 (194)
18 2qtr_A Nicotinate (nicotinamid 99.7 1.6E-16 5.4E-21 135.8 8.8 133 20-158 2-166 (189)
19 3h05_A Uncharacterized protein 99.6 4.4E-16 1.5E-20 134.4 9.9 130 20-158 2-149 (177)
20 3do8_A Phosphopantetheine aden 99.6 1.1E-16 3.7E-21 134.6 4.7 127 22-158 2-143 (148)
21 1yum_A 'probable nicotinate-nu 99.6 1.7E-15 5.8E-20 136.3 11.0 94 19-115 22-129 (242)
22 1k4m_A NAMN adenylyltransferas 99.6 2.8E-15 9.7E-20 131.3 11.6 92 22-116 4-110 (213)
23 2h29_A Probable nicotinate-nuc 99.6 6.3E-15 2.1E-19 126.7 9.6 134 20-158 2-166 (189)
24 1lw7_A Transcriptional regulat 99.5 3.7E-13 1.3E-17 125.9 13.6 125 20-155 2-154 (365)
25 1mrz_A Riboflavin kinase/FMN a 99.5 1.1E-13 3.8E-18 128.2 9.5 145 23-173 2-162 (293)
26 1f9a_A Hypothetical protein MJ 99.5 7.8E-13 2.7E-17 111.9 13.6 122 22-158 2-136 (168)
27 1ej2_A Nicotinamide mononucleo 99.4 6.5E-13 2.2E-17 113.6 12.1 124 21-158 4-142 (181)
28 1kqn_A Nmnat, nicotinamide mon 99.4 8.5E-13 2.9E-17 121.2 9.6 70 18-91 6-82 (279)
29 2qjo_A Bifunctional NMN adenyl 99.4 1.4E-12 4.9E-17 119.4 10.1 128 19-158 6-151 (341)
30 2x0k_A Riboflavin biosynthesis 99.3 9.6E-12 3.3E-16 117.2 13.3 145 22-171 17-187 (338)
31 1nup_A FKSG76; NAD biosynthesi 99.3 3.8E-12 1.3E-16 114.7 9.1 72 19-90 5-79 (252)
32 2qjt_B Nicotinamide-nucleotide 99.3 1.4E-11 4.8E-16 113.7 11.3 128 20-157 7-152 (352)
33 3op1_A Macrolide-efflux protei 99.2 3.3E-11 1.1E-15 112.4 10.6 148 22-174 22-193 (308)
34 3gmi_A UPF0348 protein MJ0951; 99.0 3.6E-09 1.2E-13 100.5 13.3 145 20-171 52-264 (357)
35 2ejc_A Pantoate--beta-alanine 98.5 3.5E-07 1.2E-11 84.3 9.5 69 20-92 22-93 (280)
36 1jhd_A Sulfate adenylyltransfe 98.0 3.2E-05 1.1E-09 74.3 10.9 132 21-158 193-371 (396)
37 1v8f_A Pantoate-beta-alanine l 97.8 2.8E-05 9.7E-10 71.4 6.7 64 22-91 21-87 (276)
38 1v47_A ATP sulfurylase; produc 97.6 0.00067 2.3E-08 64.1 13.1 90 21-117 156-260 (349)
39 3ag6_A Pantothenate synthetase 96.7 0.0062 2.1E-07 56.0 9.4 66 21-92 24-94 (283)
40 3cov_A Pantothenate synthetase 96.4 0.009 3.1E-07 55.4 8.4 65 24-91 36-104 (301)
41 1peh_A Pepnh1; transferase, nu 96.1 4E-05 1.4E-09 48.7 -6.4 34 181-214 1-34 (35)
42 3q12_A Pantoate--beta-alanine 96.0 0.013 4.3E-07 54.1 7.0 65 20-91 25-95 (287)
43 3inn_A Pantothenate synthetase 95.9 0.032 1.1E-06 52.0 9.3 66 20-91 43-113 (314)
44 3uk2_A Pantothenate synthetase 95.5 0.027 9.4E-07 51.8 7.1 66 23-91 24-92 (283)
45 3mxt_A Pantothenate synthetase 94.5 0.085 2.9E-06 48.6 7.4 56 31-91 35-94 (285)
46 3n8h_A Pantothenate synthetase 93.6 0.099 3.4E-06 47.6 5.9 61 27-91 30-94 (264)
47 1r6x_A ATP:sulfate adenylyltra 89.6 8.7 0.0003 36.6 14.7 88 21-115 188-290 (395)
48 1g8f_A Sulfate adenylyltransfe 88.5 8.1 0.00028 37.9 14.1 87 21-115 189-291 (511)
49 1lyp_A CAP18; lipopolysacchari 70.5 5.9 0.0002 24.1 3.7 25 188-212 2-26 (32)
50 2gks_A Bifunctional SAT/APS ki 69.8 6.8 0.00023 38.5 6.2 56 21-83 164-220 (546)
51 3rc1_A Sugar 3-ketoreductase; 67.2 46 0.0016 29.9 10.9 25 4-28 11-35 (350)
52 1m8p_A Sulfate adenylyltransfe 58.1 7.5 0.00026 38.4 4.0 87 22-114 192-292 (573)
53 3pl2_A Sugar kinase, ribokinas 52.9 5.3 0.00018 35.2 1.8 51 209-259 10-68 (319)
54 4e84_A D-beta-D-heptose 7-phos 52.9 1.8 6.2E-05 39.6 -1.4 50 209-258 55-119 (352)
55 3ry7_A Ribokinase; transferase 51.2 5.5 0.00019 34.8 1.6 51 209-259 4-67 (304)
56 3go6_A Ribokinase RBSK; phosph 47.2 4.9 0.00017 35.8 0.6 50 209-258 21-82 (310)
57 3kzh_A Probable sugar kinase; 46.1 5.4 0.00019 35.5 0.7 51 208-258 7-68 (328)
58 1rkd_A Ribokinase; carbohydrat 45.8 7.5 0.00026 34.0 1.6 51 209-259 6-68 (309)
59 2fv7_A Ribokinase; structural 45.6 7.3 0.00025 34.8 1.5 50 209-258 26-87 (331)
60 3gfv_A Uncharacterized ABC tra 43.0 1.2E+02 0.004 26.2 9.0 43 92-142 81-123 (303)
61 3ikh_A Carbohydrate kinase; tr 42.4 5.6 0.00019 35.0 0.2 50 209-258 4-65 (299)
62 2nwh_A AGR_C_3442P, carbohydra 41.6 7.3 0.00025 34.5 0.8 51 209-259 5-66 (317)
63 2hlz_A Ketohexokinase; non-pro 40.9 8.3 0.00028 34.1 1.1 52 209-260 19-82 (312)
64 2qcv_A Putative 5-dehydro-2-de 40.5 9.9 0.00034 33.6 1.5 52 209-260 13-72 (332)
65 3ljs_A Fructokinase; fructokia 40.1 8.1 0.00028 34.4 0.9 50 209-258 6-62 (338)
66 1vm7_A Ribokinase; TM0960, str 38.9 6.1 0.00021 35.0 -0.2 52 207-258 14-78 (311)
67 2c4e_A Sugar kinase MJ0406; tr 38.3 10 0.00035 33.2 1.2 50 209-258 7-68 (302)
68 4du5_A PFKB; structural genomi 38.1 9.3 0.00032 34.2 0.9 50 209-258 28-84 (336)
69 2rbc_A Sugar kinase, AGR_C_456 37.6 10 0.00034 34.3 1.1 50 209-258 31-92 (343)
70 2chu_A CEUE, enterochelin upta 37.4 1.9E+02 0.0065 24.8 9.4 43 92-142 81-123 (296)
71 3bf5_A Ribokinase related prot 37.2 13 0.00046 32.8 1.8 54 209-263 22-86 (306)
72 3tqo_A Cysteinyl-tRNA syntheta 36.4 17 0.00059 35.1 2.6 22 18-39 23-46 (462)
73 3ewm_A Uncharacterized sugar k 35.9 12 0.0004 32.9 1.2 50 209-258 3-59 (313)
74 1li5_A Cysrs, cysteinyl-tRNA s 33.7 21 0.00071 34.2 2.7 21 18-38 20-42 (461)
75 3ktn_A Carbohydrate kinase, PF 32.6 15 0.00053 32.6 1.4 51 209-259 4-61 (346)
76 1tyy_A Putative sugar kinase; 31.5 14 0.00048 33.1 1.0 48 209-258 26-76 (339)
77 3kd6_A Carbohydrate kinase, PF 30.8 17 0.00059 32.0 1.4 46 209-257 4-54 (313)
78 3hj6_A Fructokinase, FRK; fruc 30.3 14 0.00047 32.8 0.7 50 209-258 23-80 (327)
79 2dcn_A Hypothetical fructokina 29.2 14 0.00049 32.2 0.6 50 209-258 3-59 (311)
80 1puj_A YLQF, conserved hypothe 28.8 1.5E+02 0.0052 25.9 7.4 44 136-179 81-124 (282)
81 3c8z_A Cysteinyl-tRNA syntheta 28.7 26 0.0009 32.9 2.4 21 18-38 37-59 (414)
82 2qhp_A Fructokinase; NP_810670 28.2 17 0.00057 31.4 0.9 43 209-258 5-50 (296)
83 1v1a_A 2-keto-3-deoxygluconate 27.6 18 0.00062 31.6 1.0 50 209-258 3-59 (309)
84 3h49_A Ribokinase; transferase 26.1 23 0.0008 31.2 1.5 52 209-260 7-71 (325)
85 2v78_A Fructokinase; transfera 26.0 21 0.00072 31.2 1.1 50 209-258 3-59 (313)
86 4gm6_A PFKB family carbohydrat 25.6 22 0.00077 31.6 1.2 51 209-259 26-83 (351)
87 3h99_A Methionyl-tRNA syntheta 25.0 36 0.0012 33.0 2.7 26 14-39 12-40 (560)
88 3iq0_A Putative ribokinase II; 24.9 14 0.0005 32.7 -0.2 50 209-258 5-63 (330)
89 4e69_A 2-dehydro-3-deoxyglucon 24.8 18 0.00063 32.1 0.5 49 209-258 25-78 (328)
90 3g9q_A Ferrichrome-binding pro 24.3 3.2E+02 0.011 23.0 8.6 40 95-142 60-99 (279)
91 2ajr_A Sugar kinase, PFKB fami 24.3 26 0.00088 31.1 1.4 48 210-257 15-76 (331)
92 3tr9_A Dihydropteroate synthas 24.1 1.7E+02 0.0059 26.7 7.0 157 33-196 45-225 (314)
93 3b1n_A Ribokinase, putative; r 24.0 22 0.00076 31.5 0.9 28 231-258 43-73 (326)
94 2f02_A Tagatose-6-phosphate ki 21.4 33 0.0011 30.2 1.5 46 211-256 6-62 (323)
95 2wfb_A Putative uncharacterize 21.2 1.4E+02 0.0049 22.4 5.0 49 98-156 59-108 (120)
96 3tef_A VCTP, iron(III) ABC tra 20.9 3.6E+02 0.012 22.4 10.4 41 92-140 65-105 (292)
97 3tlk_A Ferrienterobactin-bindi 20.7 4.1E+02 0.014 23.0 9.1 43 96-142 105-147 (326)
98 1eo1_A Hypothetical protein MT 20.5 2.6E+02 0.009 21.0 6.5 49 97-156 56-105 (124)
99 2k6o_A Cathelicidin antimicrob 20.3 1E+02 0.0035 19.7 3.2 28 195-222 2-29 (37)
100 3cr8_A Sulfate adenylyltranfer 20.0 78 0.0027 31.0 4.0 87 22-115 165-266 (552)
No 1
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=5e-46 Score=335.63 Aligned_cols=167 Identities=62% Similarity=1.126 Sum_probs=137.2
Q ss_pred CCCCCCCeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcCCcceEeeCC
Q 023877 14 TAPSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDA 93 (276)
Q Consensus 14 ~~~~~r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r~VD~Vi~~~ 93 (276)
..+..+|++||++|+|||||.||+++|++|+++|++|+|||||++|+++++.||+|++|.+||+++|++|+|||+|++++
T Consensus 70 ~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~ 149 (236)
T 3hl4_A 70 GTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNA 149 (236)
T ss_dssp CCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSC
T ss_pred CCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECC
Confidence 34668999999999999999999999999999998899999999999988888889999999999999999999999999
Q ss_pred CCcchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHHHhhHHHHHHHhhcCCCc
Q 023877 94 PWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSR 173 (276)
Q Consensus 94 p~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~y~~y~~Rnl~rg~~~ 173 (276)
||.++.+|+++++||+|++|++++... .++|.|+.+++.|++++++||+++|||+|++||+++|+.|++||++|||++
T Consensus 150 p~~l~~d~i~~~~~d~Vv~GDd~~~~~--~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~~y~~R~l~rg~~~ 227 (236)
T 3hl4_A 150 PWTLTPEFLAEHRIDFVAHDDIPYSSA--GSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTA 227 (236)
T ss_dssp CSSCCHHHHHHTTCCEEEEESSCCCCS--SCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHC------------
T ss_pred cCcCcHHHHHHcCCCEEEECCccccCC--CchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHHHHHHHHhcCCCCH
Confidence 999899999999999999999887653 456789999999999999999999999999999999999999999999999
Q ss_pred ccccchhhh
Q 023877 174 KDLGVSYVK 182 (276)
Q Consensus 174 ~~l~~~~~~ 182 (276)
+||||||+|
T Consensus 228 ~~~~~~~~~ 236 (236)
T 3hl4_A 228 KELNVSFIN 236 (236)
T ss_dssp ---------
T ss_pred HHhCCcccC
Confidence 999999986
No 2
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=265.64 Aligned_cols=145 Identities=30% Similarity=0.566 Sum_probs=128.5
Q ss_pred CCCCCCeEEEEcccccCCChHHHHHHHHHhhhCCCC--eEEEEEcCChhhhccCC--CCCCCHHHHHHHHHhcCCcceEe
Q 023877 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNT--YLLVGCCNDETTHKFKG--KTVMTEDERYESLRHCKWVDEVI 90 (276)
Q Consensus 15 ~~~~r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d--~LIVGV~sD~~~~~~Kg--rpi~s~eER~e~l~~~r~VD~Vi 90 (276)
.+.+..++||++|+|||||.||+++|++|+++| | +|||||++|+++++.|| +|+||.+||+++|++|++||+|+
T Consensus 193 ~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~--D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~ 270 (341)
T 3elb_A 193 EPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLA--ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVV 270 (341)
T ss_dssp CCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTS--SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTCCEEE
T ss_pred CCCCCCEEEEEecccCCCCHHHHHHHHHHHHhC--CCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCCCCEE
Confidence 345566799999999999999999999999997 7 99999999999888887 59999999999999999999999
Q ss_pred eCCCCcchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHHHhhHHH
Q 023877 91 PDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQY 162 (276)
Q Consensus 91 ~~~p~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~y~~y 162 (276)
+++||.++.+|+++++||++++|.|+.... ..+.|.|+..++.|+|..+++++++|||+|++||+++|..|
T Consensus 271 v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~-~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~nr~~~ 341 (341)
T 3elb_A 271 IGAPYAVTAELLSHFKVDLVCHGKTEIIPD-RDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEY 341 (341)
T ss_dssp EEECSSCCHHHHHHTTCSEEEECSSCCCCC-TTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC-----
T ss_pred ECCCCcchHHHHHhcCCcEEEECCCCcccc-CCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999776542 34678899999999999999999999999999999999876
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=252.90 Aligned_cols=140 Identities=45% Similarity=0.757 Sum_probs=127.0
Q ss_pred CCCCeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcCCcceEeeCCCCc
Q 023877 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWV 96 (276)
Q Consensus 17 ~~r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r~VD~Vi~~~p~~ 96 (276)
..+|++|++.|+||+||.||+++|++|++++ |+|+|||++|+.+.+.||.|++|.+||+++|++|+|||+|++.+||.
T Consensus 4 ~~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~--d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~ 81 (341)
T 3elb_A 4 GRRAVRVWCDGCYDMVHYGHSNQLRQARAMG--DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYV 81 (341)
T ss_dssp CCCCCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSS
T ss_pred CCCceEEEEEeeCCCCCHHHHHHHHHHHHhC--CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCC
Confidence 4678899999999999999999999999996 89999999999887778889999999999999999999999988998
Q ss_pred chHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHHHhhH
Q 023877 97 VTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYN 160 (276)
Q Consensus 97 ~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~y~ 160 (276)
.+.+|+++++||++++|+|+..+. .+.|.|+.+++.|+++++|||+|+|||+|++||+..+.
T Consensus 82 ~~~efi~~~~~d~vV~G~D~~~g~--~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~ 143 (341)
T 3elb_A 82 TTLETLDKYNCDFCVHGNDITLTV--DGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTK 143 (341)
T ss_dssp CCHHHHHHTTCSEEEECSCCCBCT--TSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC---
T ss_pred CHHHHHHHhCCCEEEECCCCCCCC--CCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhcc
Confidence 789999999999999999877653 35688999999999999999999999999999988664
No 4
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.90 E-value=1.7e-23 Score=170.39 Aligned_cols=128 Identities=30% Similarity=0.454 Sum_probs=95.7
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC-CCCCCHHHHHHHHHhcCCcceEeeCCCCcch
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLRHCKWVDEVIPDAPWVVT 98 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg-rpi~s~eER~e~l~~~r~VD~Vi~~~p~~~t 98 (276)
|+++++.|+|||+|.||+.++++|++++ ++++|+|++|+.... ++ .|++|.+||++|+++|.++|.|++..+|+.+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--~~~~v~v~~~~~~~~-~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~ 77 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALSTDEFNQI-KHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQK 77 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEEECHHHHHH-TTCCCSSCHHHHHHHHHTBTTCCEEEEECCGGGH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhC--CcEEEEEECCHHHhc-cCCCCCCCHHHHHHHHHhcCCCCEEEECCChHHH
Confidence 5689999999999999999999999996 789999999984322 33 4799999999999999999999886677766
Q ss_pred HHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHHHh
Q 023877 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKD 158 (276)
Q Consensus 99 ~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~ 158 (276)
.+++++++|++++.|.|...+ ++.+++.|+++.+++...+|||.|+++|.+.
T Consensus 78 ~~~~~~~~~~~iv~G~D~~~~--------~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 78 EDDVEKFDVDVFVMGHDWEGE--------FDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHHHHHTTCCEEEECGGGTTT--------TGGGTTTSEEEECSSCC--------------
T ss_pred HHHHHHcCCCEEEECCCCcCc--------HHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 778899999999999854211 2357778999999999999999999998654
No 5
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.90 E-value=1.4e-23 Score=169.95 Aligned_cols=126 Identities=32% Similarity=0.450 Sum_probs=105.8
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC-CCCCCHHHHHHHHHhcCCcceEeeCCCCcch
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLRHCKWVDEVIPDAPWVVT 98 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg-rpi~s~eER~e~l~~~r~VD~Vi~~~p~~~t 98 (276)
|+++++.|+|||+|.||+.++++|++.+ |+++|+++.|+... .|+ .+++|.+||++|+++|.++|.|+...+|+.+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--d~~~v~v~~~~~~~-~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~ 77 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAISTDEFNL-QKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQK 77 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEECHHHHH-HHTCCCSSCHHHHHHHHTTBTTCCEEEEECCSTTH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHh-cCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHHHH
Confidence 5689999999999999999999999996 88999999987321 123 5799999999999999999999887777766
Q ss_pred HHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHH
Q 023877 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156 (276)
Q Consensus 99 ~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~ 156 (276)
.++++++++++++.|.|+..+ ++.+++.++++.+++...+|||.|+++|.
T Consensus 78 ~~~l~~~~~~~iv~G~D~~~~--------~~~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 78 KQDIIDHNIDVFVMGDDWEGK--------FDFLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHHHHHTTCSEEEEEGGGTTT--------TGGGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHHHHHhCCcEEEECCCCCCc--------HHHHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 778899999999999864211 33577789999999999999999998764
No 6
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.87 E-value=3.9e-22 Score=165.79 Aligned_cols=134 Identities=21% Similarity=0.240 Sum_probs=92.1
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcCCcceEeeCCCCcchH
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQ 99 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r~VD~Vi~~~p~~~t~ 99 (276)
|++|++.|+||++|.||..+|++|++++ +.++|+|++|+...+.+.++++|.+||+++++++.+||.|++.+|.+ ..
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~--~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~~-f~ 78 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLG--DELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEGD-MM 78 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTS--SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTTC-HH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhC--CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCchh-HH
Confidence 7899999999999999999999999996 78999999998765422358999999999999999999999877776 34
Q ss_pred HHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcC---eEEEccc--cCCCChHHHHHHHHHhhH
Q 023877 100 EFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG---KFKETKR--TDGISTSDIIMRIVKDYN 160 (276)
Q Consensus 100 e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G---~~~~~~r--t~giSTT~Ii~rI~~~y~ 160 (276)
+++++++++++++|.|...+ .++..+..++.| .++.... ...+|||.|++.|.+.|+
T Consensus 79 ~~~~~l~~~~iv~G~d~~f~----~~~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~ 140 (143)
T 3glv_A 79 KTVIEVKPDIITLGYDQKFD----EAELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELIG 140 (143)
T ss_dssp HHHHHHCCSEEEECTTCHHH----HHHHHHHHHHHTCCCEEEECCCCC------------------
T ss_pred HHHHhcCCCEEEECCCCCCC----HHHHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhc
Confidence 68999999999999864322 224444555566 3444433 357999999999988875
No 7
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.83 E-value=1e-20 Score=160.98 Aligned_cols=130 Identities=16% Similarity=0.042 Sum_probs=98.7
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCcceEeeCCCCcch
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVDEVIPDAPWVVT 98 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~VD~Vi~~~p~~~t 98 (276)
|++++++|+|||+|.||++++++|+++| |+|||+|++|+ .| +|++|.+||++|++. ++.+|.|.+....+++
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~--D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~ 74 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF--EKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVECVAFEGLL 74 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC--CceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEEEecCchH
Confidence 5789999999999999999999999997 89999999886 24 589999999999996 8899988663333567
Q ss_pred HHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcC---eEEEccccC---CCChHHHHHHHHH
Q 023877 99 QEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG---KFKETKRTD---GISTSDIIMRIVK 157 (276)
Q Consensus 99 ~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G---~~~~~~rt~---giSTT~Ii~rI~~ 157 (276)
.+++++++||++++|.....|+. -+.+....-+.+. +.++++.++ .+|||.|++.+..
T Consensus 75 ~~~~~~~~~~~ivrG~r~~~D~~-ye~~~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~ 138 (157)
T 3nv7_A 75 AYLAKEYHCKVLVRGLRVVSDFE-YELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAH 138 (157)
T ss_dssp HHHHHHTTCCCBCCCCSCCCCHH-HHHHHHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECCcccchhh-hhHHHHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHc
Confidence 89999999999999965444431 0111112223332 555555554 8999999887653
No 8
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.82 E-value=2.8e-20 Score=158.80 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=94.5
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcCCcceEeeCCCCcchH
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQ 99 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r~VD~Vi~~~p~~~t~ 99 (276)
|++++++|+|||+|.||++++++|+++| |+|||+|++|+ .| +|++|.+||++|++.+-..|.|.+....+++.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~--d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLF--NKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGC--SEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHC--CcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 6789999999999999999999999997 89999999886 34 58999999999999643338776644445788
Q ss_pred HHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhc--C-eEEEccccC---CCChHHHHHHHHHh
Q 023877 100 EFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA--G-KFKETKRTD---GISTSDIIMRIVKD 158 (276)
Q Consensus 100 e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~--G-~~~~~~rt~---giSTT~Ii~rI~~~ 158 (276)
++++++++|++++|.+...|+.. ........++. + +.+++++++ .+|||.|++++..+
T Consensus 78 ~~~~~~~~~~~v~G~r~~~Df~~-e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 78 DFAKTHQANFILRGLRAVSDFDY-EFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp HHHHHTTCCEEEEEECSHHHHHH-HHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred HHHHHcCCCEEEECCCchhhhhh-HHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 99999999999999765555421 00111111222 2 566655443 89999998887643
No 9
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.79 E-value=5.1e-19 Score=154.43 Aligned_cols=132 Identities=14% Similarity=0.087 Sum_probs=100.4
Q ss_pred CCeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCcceEeeCCCCcc
Q 023877 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVDEVIPDAPWVV 97 (276)
Q Consensus 19 r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~VD~Vi~~~p~~~ 97 (276)
.|+++++.|+|||+|.||++++++|++++ |+|+|+|++|+ .| +|++|.+||++|++. ++.+|.|++....++
T Consensus 21 ~mki~v~~GsFDpiH~GHl~li~~A~~~~--d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~ 93 (187)
T 3k9w_A 21 SMVVAVYPGTFDPLTRGHEDLVRRASSIF--DTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKVMGFTGL 93 (187)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEEEEESSC
T ss_pred CcEEEEEEEeCCcCcHHHHHHHHHHHHHC--CcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEEEechhh
Confidence 37899999999999999999999999997 89999999875 24 589999999999997 799999876333356
Q ss_pred hHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhc--C-eEEEcccc---CCCChHHHHHHHHHh
Q 023877 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA--G-KFKETKRT---DGISTSDIIMRIVKD 158 (276)
Q Consensus 98 t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~--G-~~~~~~rt---~giSTT~Ii~rI~~~ 158 (276)
+.+++++++++++++|.+...|+.. +......-++. + +.++++.+ ..+|||.|++++..+
T Consensus 94 ~~d~l~~l~~~~iv~G~r~~~Df~~-E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 94 LKDFVRANDARVIVRGLRAVSDFEY-EFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCHHH-HHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECCCcccccch-HHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 7899999999999999765555420 00111112222 2 55555443 489999999987643
No 10
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.78 E-value=1.1e-18 Score=149.75 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=94.7
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCcceEeeCCCCcch
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVDEVIPDAPWVVT 98 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~VD~Vi~~~p~~~t 98 (276)
+++++++|+|||+|.||++++++|++++ |+|+|++++++ .| ++++|.++|++|++. ++..+.|.+..-.+++
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~--d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC--CEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 5689999999999999999999999997 89999999875 34 589999999999994 7888877653323578
Q ss_pred HHHHhhcCCCEEEeCCCcccccCCCCc-hHHHHHHhc---CeEEEc---cccCCCChHHHHHHHHHhh
Q 023877 99 QEFLDKHQIDFVAHDSLPYADASGAGK-DVYEFVKAA---GKFKET---KRTDGISTSDIIMRIVKDY 159 (276)
Q Consensus 99 ~e~L~~~~~D~vv~G~d~y~~~~~~~~-d~y~~lk~~---G~~~~~---~rt~giSTT~Ii~rI~~~y 159 (276)
.++++++++++++.|.|...++. .+ ......+.. -..+++ |....+|||.|++++..+-
T Consensus 76 vd~~~~l~~~~~I~G~d~~~d~~--~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g~ 141 (168)
T 3f3m_A 76 VDYCEQVGAKTIIRGLRAVSDFE--YELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYRA 141 (168)
T ss_dssp HHHHHHHTCCEEEEEECTTCCHH--HHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEcCCchhhhh--HHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcCC
Confidence 99999999999999987666542 11 111111221 133333 2233499999999986543
No 11
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.78 E-value=2.8e-18 Score=148.87 Aligned_cols=131 Identities=14% Similarity=0.107 Sum_probs=99.9
Q ss_pred CCCCCCeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCC
Q 023877 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDA 93 (276)
Q Consensus 15 ~~~~r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~ 93 (276)
|...+|++++++|+|||+|.||++++++|+++| |+|||+|+.|+ .| ++.+|.+||++|++ +++..+.|.+..
T Consensus 16 ~~~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~--D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~ 88 (177)
T 3nbk_A 16 PRGSHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQV 88 (177)
T ss_dssp ----CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEE
T ss_pred cCCCCCEEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEe
Confidence 345678899999999999999999999999998 89999999875 34 48999999999999 588888887644
Q ss_pred CCcchHHHHhhcCCCEEEeCCCcccccCCCCchHHH------HHHhcCeEEEc---cccCCCChHHHHHHHHH
Q 023877 94 PWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYE------FVKAAGKFKET---KRTDGISTSDIIMRIVK 157 (276)
Q Consensus 94 p~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~------~lk~~G~~~~~---~rt~giSTT~Ii~rI~~ 157 (276)
-.+++.++++++++++++.|.+...||+ .+.+ .+ ..-+.+++ +....+|||.|++++..
T Consensus 89 ~e~l~vd~~~~~~a~~ivrGlr~~~Dfe----ye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~ 156 (177)
T 3nbk_A 89 GHGLVVDFVRSCGMTAIVKGLRTGTDFE----YELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAML 156 (177)
T ss_dssp CCSCHHHHHHHTTCCEEEEEECTTCCHH----HHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHT
T ss_pred cCchHHHHHHHcCCCEEEECCCchhHHH----HHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHc
Confidence 4468899999999999999976655542 1111 12 22244444 34458999999887653
No 12
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.77 E-value=9.7e-19 Score=150.54 Aligned_cols=130 Identities=15% Similarity=0.081 Sum_probs=94.2
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEee-CCCCcc
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIP-DAPWVV 97 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~-~~p~~~ 97 (276)
|++++++|+|||+|.||++++++|+++| |+|+|+++.++ .| +|++|.++|++|++ +++.++.|.+ ....+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~--D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLF--DEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHC--CCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 5789999999999999999999999997 89999998775 24 48999999999999 5899988866 333357
Q ss_pred hHHHHhhcCCCEEEeCCCcccccCCCCchHHHHH-Hh----cCeEEEc--cccCCCChHHHHHHHHHh
Q 023877 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFV-KA----AGKFKET--KRTDGISTSDIIMRIVKD 158 (276)
Q Consensus 98 t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~l-k~----~G~~~~~--~rt~giSTT~Ii~rI~~~ 158 (276)
+.+++++++++++++|.+...++. .+-..+.+ +. .+.+... |....+|||.|++++..+
T Consensus 75 tvd~~~~l~~~~~i~G~~~~~d~~--~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 75 TVESAKSLGANFLIRGIRNVKDYE--YEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HHHHHHHHTCCEEEEEECSHHHHH--HHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEECCCchhhhH--HHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 899999999999999976555431 01011111 11 1233332 344589999999988653
No 13
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.76 E-value=2.5e-18 Score=147.21 Aligned_cols=127 Identities=19% Similarity=0.175 Sum_probs=93.7
Q ss_pred eEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCCCCcchH
Q 023877 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPWVVTQ 99 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~p~~~t~ 99 (276)
.+++++|+|||+|.||++++++|+++| |+|+|++++++ .| ++++|.++|++|++ +++.++.|.+....+.+.
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~--D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tv 85 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKVDVHHGLLV 85 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHC--CEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEEecCcchHH
Confidence 369999999999999999999999997 89999999985 23 48999999999999 799998886532223688
Q ss_pred HHHhhcCCCEEEeCCCcccccCCCCchHHH--HHHhc----CeEEEc---cccCCCChHHHHHHHHHh
Q 023877 100 EFLDKHQIDFVAHDSLPYADASGAGKDVYE--FVKAA----GKFKET---KRTDGISTSDIIMRIVKD 158 (276)
Q Consensus 100 e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~--~lk~~----G~~~~~---~rt~giSTT~Ii~rI~~~ 158 (276)
++++++++++++.|.....++ +.+.. .+.+. ...+++ |..+.+|||.|++++..+
T Consensus 86 d~l~~l~~~~~i~gl~~w~d~----~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 86 DYLKKHGIKVLVRGLRAVTDY----EYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HHHHHHTCCEEEEEECTTSCH----HHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHhCCCeEEeCCCcccch----hhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 999999999999885322222 11111 11221 233333 334479999999998653
No 14
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.75 E-value=1.1e-17 Score=138.96 Aligned_cols=127 Identities=15% Similarity=0.116 Sum_probs=94.3
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCCCC-cc
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPW-VV 97 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~p~-~~ 97 (276)
|+++++.|+|||+|.||+.++++|++.+ |+++|+++.|+ .| ++++|.++|++|++ ++..+|.+.+. ++ ..
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~--d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~~~~ 72 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEVV-GFSDL 72 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSC
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC--CEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEEc-ccchH
Confidence 4689999999999999999999999997 88999999875 24 47899999999999 58899987652 22 35
Q ss_pred hHHHHhhcCCCEEEeCCCcccccCCCCchHHH--HH-HhcC----eEEEcccc--CCCChHHHHHHHHHh
Q 023877 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYE--FV-KAAG----KFKETKRT--DGISTSDIIMRIVKD 158 (276)
Q Consensus 98 t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~--~l-k~~G----~~~~~~rt--~giSTT~Ii~rI~~~ 158 (276)
+.++++++++++++.|.|...++. .... .+ +..+ .+...+.. ..+|||.|+++|.++
T Consensus 73 ~~~~l~~l~~~~~v~G~d~~~~~~----~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 73 MANFARNQHATVLIRGLRAVADFE----YEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp HHHHHHHTTCCEEEEECCTTCCHH----HHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeccchhhhH----HHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 678999999999999986544321 1111 11 2221 33333333 469999999998754
No 15
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.68 E-value=3.7e-16 Score=131.87 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=94.0
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCCCC-cc
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPW-VV 97 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~p~-~~ 97 (276)
++++++.|+|||+|.||+.++++|++.+ |.++|.++.++ .| ++++|.+||++|++ ++..+|.+.+. ++ ..
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~--d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 73 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITVE-TSQGL 73 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEEE-ECSSC
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC--CEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEEc-ccchH
Confidence 4689999999999999999999999997 88999888654 24 57899999999999 57888877652 23 35
Q ss_pred hHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHh-c--C-eEEEc-cc--cCCCChHHHHHHHHHh
Q 023877 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKA-A--G-KFKET-KR--TDGISTSDIIMRIVKD 158 (276)
Q Consensus 98 t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~-~--G-~~~~~-~r--t~giSTT~Ii~rI~~~ 158 (276)
+.++++++++++++.|.|...++.. ......+.+ . | .++.+ +. ...+|||.|++++.+.
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~--~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEY--EMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHH--HHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHH--HHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 6788999999999999876554310 011112222 1 3 33333 22 2369999999998764
No 16
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.67 E-value=3.4e-16 Score=130.37 Aligned_cols=128 Identities=14% Similarity=0.184 Sum_probs=89.9
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCCCC-cc
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDAPW-VV 97 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~p~-~~ 97 (276)
|+ +++.|+|||+|.||+.++++|++.+ |.++|+++.++. + ++.+++|.++|++|++ ++..+|.+.+. ++ ..
T Consensus 1 m~-~v~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~~~~~p~--k-~~~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 73 (160)
T 1od6_A 1 MH-VVYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVLENPS--K-RGQYLFSAEERLAIIREATAHLANVEAA-TFSGL 73 (160)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECC--------CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSC
T ss_pred Ce-EEEEeeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCCC--C-CCCCCCCHHHHHHHHHHHhcCCCCEEEE-ecCch
Confidence 45 8999999999999999999999997 889999986642 1 1236899999999999 57888877552 22 35
Q ss_pred hHHHHhhcCCCEEEeCCCcccccCCCCchHHH--H-HHhc--C--eEEEccc--cCCCChHHHHHHHHHh
Q 023877 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYE--F-VKAA--G--KFKETKR--TDGISTSDIIMRIVKD 158 (276)
Q Consensus 98 t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~--~-lk~~--G--~~~~~~r--t~giSTT~Ii~rI~~~ 158 (276)
+.++++++++++++.|.|...++ +.... . .+.. + .+...+. ...+|||.|++++..+
T Consensus 74 ~~~~l~~l~~~~~v~G~d~~~~~----~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 74 LVDFVRRVGAQAIVKGLRAVSDY----EYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHHTTCSEEEEEECTTSCH----HHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeCCcccch----HHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 67899999999999997643332 11111 1 1222 1 2333332 2479999999998654
No 17
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.66 E-value=9.4e-16 Score=132.39 Aligned_cols=133 Identities=13% Similarity=-0.068 Sum_probs=91.1
Q ss_pred eEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC-CCCCCHHHHHHHHH-hcCCcceEeeCC-----
Q 023877 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR-HCKWVDEVIPDA----- 93 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg-rpi~s~eER~e~l~-~~r~VD~Vi~~~----- 93 (276)
+++++.|+|||+|.||+.++++|++.+..|.++++++.++. .|+ .+++|.++|++|++ +++.+|.+.+.+
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 84 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMER 84 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEECCGGGST
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEEeHHHhcC
Confidence 67999999999999999999999999866899999987762 343 46899999999999 588888776521
Q ss_pred -CCcchHHHHhhc---CCC---EEEeCCCcccccCCCCchHHHHHHhcCeEEEcccc-----------------CCCChH
Q 023877 94 -PWVVTQEFLDKH---QID---FVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRT-----------------DGISTS 149 (276)
Q Consensus 94 -p~~~t~e~L~~~---~~D---~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt-----------------~giSTT 149 (276)
....+.+.++.+ .|+ +++.|.|...+...|. .|+.+.+...++..+|. ..+|||
T Consensus 85 ~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~W~--~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST 162 (194)
T 1kam_A 85 EGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWY--KLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSST 162 (194)
T ss_dssp TCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCH--HHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHH
T ss_pred CCCCChHHHHHHHHHHCCCCcEEEEEecchhhhhcccc--CHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHH
Confidence 112344555544 455 8999998777654442 23333333333333332 279999
Q ss_pred HHHHHHHHh
Q 023877 150 DIIMRIVKD 158 (276)
Q Consensus 150 ~Ii~rI~~~ 158 (276)
.|++++..+
T Consensus 163 ~IR~~i~~g 171 (194)
T 1kam_A 163 MIRERFKSK 171 (194)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999998755
No 18
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.66 E-value=1.6e-16 Score=135.80 Aligned_cols=133 Identities=12% Similarity=-0.016 Sum_probs=97.4
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC-CCCCCHHHHHHHHH-hcCCcceEeeCCCC--
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR-HCKWVDEVIPDAPW-- 95 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg-rpi~s~eER~e~l~-~~r~VD~Vi~~~p~-- 95 (276)
++++++.|+|||+|.||+.++++|++.+..|.+++.+++++. .|+ .+++|.++|++|++ +++.+|.+.+. +|
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v~-~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSIC-LEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEEC-CTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEEe-hHHh
Confidence 368999999999999999999999999877899999998763 242 46899999999999 58888877652 22
Q ss_pred -----cchHHHHhhcC---CCE---EEeCCCcccccCCCCchHHHHHHhcCeEEEcccc-----------------CCCC
Q 023877 96 -----VVTQEFLDKHQ---IDF---VAHDSLPYADASGAGKDVYEFVKAAGKFKETKRT-----------------DGIS 147 (276)
Q Consensus 96 -----~~t~e~L~~~~---~D~---vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt-----------------~giS 147 (276)
..+.+.++.++ |+. ++.|.|...+...|++ ++.+.+.+.++..+|. ..+|
T Consensus 78 ~~~~~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~~~~w~~--~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iS 155 (189)
T 2qtr_A 78 SRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYN--IEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVS 155 (189)
T ss_dssp GSCSCCCHHHHHHHHHHHCTTCEEEEEEEHHHHHHGGGSTT--HHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCC
T ss_pred cCCCCCCHHHHHHHHHHHCCCCCEEEEEehhhhhhhhccCC--HHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccC
Confidence 34556666654 443 8999876554433432 4566666666655542 3789
Q ss_pred hHHHHHHHHHh
Q 023877 148 TSDIIMRIVKD 158 (276)
Q Consensus 148 TT~Ii~rI~~~ 158 (276)
||.|++++.++
T Consensus 156 ST~IR~~l~~g 166 (189)
T 2qtr_A 156 SSLLRERYKEK 166 (189)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999998654
No 19
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.64 E-value=4.4e-16 Score=134.38 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=91.9
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCcc--eEee-----
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWVD--EVIP----- 91 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~VD--~Vi~----- 91 (276)
+++++++|+|||+|.||+++++ |.+.+ |+|+|+++++. +.| ++.++.++|++|++. ++..+ .+.+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~--d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF--DLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS--SEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC--CEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4689999999999999999998 88777 89999999863 223 478999999999994 54321 2211
Q ss_pred -----C-CCCc-chHHHHhhcCCC---EEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHHHh
Q 023877 92 -----D-APWV-VTQEFLDKHQID---FVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKD 158 (276)
Q Consensus 92 -----~-~p~~-~t~e~L~~~~~D---~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~~ 158 (276)
+ ..|+ .|.+.+++..|+ +++.|.|.+.+...|.+ ++.+-+...++.++|...+|||+|+++|.++
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~--~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYK--AEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTT--HHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchh--HHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 1 2343 345666665565 57899887765443432 4555556778888999999999999999765
No 20
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.63 E-value=1.1e-16 Score=134.60 Aligned_cols=127 Identities=17% Similarity=0.225 Sum_probs=90.4
Q ss_pred EEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-c-CCcc----eEeeCCCC
Q 023877 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-C-KWVD----EVIPDAPW 95 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~-r~VD----~Vi~~~p~ 95 (276)
+|+++|+|||+|.||+.++++|++++ .|+|+|+|++|+..++ +.++++|.++|++|++. + +..+ -+-+.+++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~-~d~viv~v~~~~~~~k-~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~ 79 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLG-GRDITIGVTSDRMARA-RIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPY 79 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHH-TTCEEEEEECHHHHHH-HSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhC-CCEEEEEECCCccccc-cCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCC
Confidence 58999999999999999999999983 4899999999986533 23689999999999995 6 4332 22236677
Q ss_pred cchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCe----EEEccc-----cCCCChHHHHHHHHHh
Q 023877 96 VVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGK----FKETKR-----TDGISTSDIIMRIVKD 158 (276)
Q Consensus 96 ~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~----~~~~~r-----t~giSTT~Ii~rI~~~ 158 (276)
+.+. .-.+|+++.+.+.+.+ .+...+..++.|- +..++- ...+|||.|++++++.
T Consensus 80 g~~~----~~~~d~ivvs~Et~~~----~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id~ 143 (148)
T 3do8_A 80 GKTL----DVDFEYLVVSPETYEM----ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEIDR 143 (148)
T ss_dssp TTTT----TSCCSEEEECTTTHHH----HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC-
T ss_pred CCCC----CCCCCEEEEChhhccc----HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHhh
Confidence 6553 4689999998866653 2334444566664 555542 2369999999887653
No 21
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.62 E-value=1.7e-15 Score=136.29 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=75.0
Q ss_pred CCeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCC----
Q 023877 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDA---- 93 (276)
Q Consensus 19 r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~---- 93 (276)
.++++++.|+|||+|.||+.++++|++.++.|.|+|+++.|+. .|+.++++.++|++|++ +++.++.|.+..
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~ 98 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTVDPRELQ 98 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEECCGGGG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEEeeeeec
Confidence 3567999999999999999999999999867899999998862 24457899999999999 688888776522
Q ss_pred --CCcchHHHHhhc----CCC---EEEeCCC
Q 023877 94 --PWVVTQEFLDKH----QID---FVAHDSL 115 (276)
Q Consensus 94 --p~~~t~e~L~~~----~~D---~vv~G~d 115 (276)
.+..|.+.++.+ +|+ +++.|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 224566777655 588 7888874
No 22
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.61 E-value=2.8e-15 Score=131.30 Aligned_cols=92 Identities=15% Similarity=0.062 Sum_probs=72.6
Q ss_pred E-EEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEeeCC------
Q 023877 22 R-VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVIPDA------ 93 (276)
Q Consensus 22 ~-V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi~~~------ 93 (276)
+ +++.|+|||+|.||+.++++|++.++.|.++|.++.++. .|..+++|.++|++|++ +++.+|.+.+.+
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 80 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRN 80 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEEeHHHhcCC
Confidence 5 899999999999999999999999766889999987753 24346899999999999 688888776521
Q ss_pred CCcchHHHHhhc----CCC---EEEeCCCc
Q 023877 94 PWVVTQEFLDKH----QID---FVAHDSLP 116 (276)
Q Consensus 94 p~~~t~e~L~~~----~~D---~vv~G~d~ 116 (276)
.+..|.++++.+ +|+ +++.|.|.
T Consensus 81 ~~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 81 APSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp SCCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 113345666554 899 89999753
No 23
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.57 E-value=6.3e-15 Score=126.73 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=92.5
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC-CCCCCHHHHHHHHH-hcCCcceEeeCC----
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR-HCKWVDEVIPDA---- 93 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg-rpi~s~eER~e~l~-~~r~VD~Vi~~~---- 93 (276)
|+++++.|+|||+|.||+.++++|++.++.|.+++.+++++. .|+ .+++|.++|++|++ +++..+.+.+..
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~ 78 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIK 78 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhc
Confidence 367899999999999999999999999867888887777763 233 46899999999999 577666554421
Q ss_pred --CCcchHH---HHhhcCCC---EEEeCCCcccccCCCCchHHHHHHhcCeEEEcccc-----------------CCCCh
Q 023877 94 --PWVVTQE---FLDKHQID---FVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRT-----------------DGIST 148 (276)
Q Consensus 94 --p~~~t~e---~L~~~~~D---~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt-----------------~giST 148 (276)
.+..|.+ .+++..|+ +++.|.|...+...|.+ ++.+-+...+...+|. ..+||
T Consensus 79 ~~~~syt~dtl~~l~~~~p~~~~~~i~G~D~~~~~~~W~~--~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISS 156 (189)
T 2h29_A 79 RGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQ--IEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISS 156 (189)
T ss_dssp HCSBCCHHHHHHHHHHHSTTEEEEEEEEHHHHTTGGGSTT--HHHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCH
T ss_pred CCCCCCHHHHHHHHHHHCCCCcEEEEEecchhhhhccccC--HHHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCH
Confidence 1123344 44455677 89999876555433322 2333333444444443 36999
Q ss_pred HHHHHHHHHh
Q 023877 149 SDIIMRIVKD 158 (276)
Q Consensus 149 T~Ii~rI~~~ 158 (276)
|.|++++..+
T Consensus 157 T~IR~~i~~g 166 (189)
T 2h29_A 157 TMIRQRVSEG 166 (189)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 9999998654
No 24
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.47 E-value=3.7e-13 Score=125.87 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=84.5
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhh----hc-cCCCCCCCHHHHHHHHH-hcCCcce-Eee-
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETT----HK-FKGKTVMTEDERYESLR-HCKWVDE-VIP- 91 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~----~~-~Kgrpi~s~eER~e~l~-~~r~VD~-Vi~- 91 (276)
++++++.|+|||+|.||+.++++|+++| |+|+|+|++++.. ++ .+.++++|.+||++||+ +++..+. |.+
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~ 79 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIH 79 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEE
Confidence 4579999999999999999999999997 9999999998742 11 12234599999999998 5776554 322
Q ss_pred -------CC-C-----Ccc-hHHHHh--hcCCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEcc--c-cCCCChHHH
Q 023877 92 -------DA-P-----WVV-TQEFLD--KHQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETK--R-TDGISTSDI 151 (276)
Q Consensus 92 -------~~-p-----~~~-t~e~L~--~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~--r-t~giSTT~I 151 (276)
+. | |.. ...+++ ..++|+++.++.++. ....++.| ++++++ | ...+|||.|
T Consensus 80 ~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~~---------~~~~~~~~~e~v~l~~~~~~~~iSsT~I 150 (365)
T 1lw7_A 80 HLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDK---------APYEKYLGLEVSLVDPDRTFFNVSATKI 150 (365)
T ss_dssp EEECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGGH---------HHHHHHTCCEEECCCSSCCSSCCCHHHH
T ss_pred EeccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCCH---------HHHHHHcCCceEEeCCcccCCCCCHHHH
Confidence 11 2 211 112233 367888775542111 12344556 677765 4 358999999
Q ss_pred HHHH
Q 023877 152 IMRI 155 (276)
Q Consensus 152 i~rI 155 (276)
++.+
T Consensus 151 Re~~ 154 (365)
T 1lw7_A 151 RTTP 154 (365)
T ss_dssp HHCG
T ss_pred HhCh
Confidence 8764
No 25
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.46 E-value=1.1e-13 Score=128.16 Aligned_cols=145 Identities=17% Similarity=0.156 Sum_probs=100.2
Q ss_pred EEEcccccCCChHHHHHHHHHhhhCCCCeE---EEEEcCCh---hhhccCCCCCCCHHHHHHHHHhcCCcceEeeC---C
Q 023877 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYL---LVGCCNDE---TTHKFKGKTVMTEDERYESLRHCKWVDEVIPD---A 93 (276)
Q Consensus 23 V~~~G~FD~fH~GHl~~L~qAk~l~~~d~L---IVGV~sD~---~~~~~Kgrpi~s~eER~e~l~~~r~VD~Vi~~---~ 93 (276)
|++.|+||.+|.||..+|++|++++ +.+ .|.++.|+ .....+.++++|.+||+++++++. ++.|++- +
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a--~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a 78 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIA--FFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLDFFRIK 78 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHH--HHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEECHHHHT
T ss_pred EEEEeeCccccHHHHHHHHHHHHHH--HHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEEhHHhh
Confidence 6889999999999999999999884 431 24444453 222112247999999999999988 5555542 1
Q ss_pred CCcchHHHHhh--cCCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEccc----cCCCChHHHHHHHHHhhHHHHHHH
Q 023877 94 PWVVTQEFLDK--HQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKR----TDGISTSDIIMRIVKDYNQYVMRN 166 (276)
Q Consensus 94 p~~~t~e~L~~--~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~r----t~giSTT~Ii~rI~~~y~~y~~Rn 166 (276)
. ....+|++. +++++++.|.|+..+...++ + .+.+++.| ++..+|. ...+|||.|++.|.+..-+...+-
T Consensus 79 ~-ls~~~Fi~~ill~~~~iVvG~Df~fG~~~~g-~-~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G~i~~a~~l 155 (293)
T 1mrz_A 79 D-LTPEGFVERYLSGVSAVVVGRDFRFGKNASG-N-ASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEGRVEEIPAY 155 (293)
T ss_dssp T-CCHHHHHHHHCTTCCEEEEETTCCBSGGGCB-C-HHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTTCTTTTHHH
T ss_pred c-CCHHHHHHHHhcCCCEEEECCCCCCCCCCCC-C-HHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcCcHHHHhhh
Confidence 1 123578777 89999999998765432222 2 55677776 8888874 358999999999877654445555
Q ss_pred hhcCCCc
Q 023877 167 LDRGYSR 173 (276)
Q Consensus 167 l~rg~~~ 173 (276)
|-|-|+.
T Consensus 156 LGr~y~i 162 (293)
T 1mrz_A 156 LGRYFEI 162 (293)
T ss_dssp HSSCCEE
T ss_pred cCCCeEE
Confidence 5555543
No 26
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.46 E-value=7.8e-13 Score=111.89 Aligned_cols=122 Identities=17% Similarity=0.252 Sum_probs=80.9
Q ss_pred EEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEE-cCChhhhccCCCCCCCHHHHHHHHH-hcCCcc-eEee--CCCC-
Q 023877 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGC-CNDETTHKFKGKTVMTEDERYESLR-HCKWVD-EVIP--DAPW- 95 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV-~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD-~Vi~--~~p~- 95 (276)
++++.|+|||+|.||+.++++|++.+ |+|+|+| +.++ . .|.++.+|.++|++|++ +++..+ .+.+ -+.+
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~-p--~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~ 76 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQK-S--HTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIE 76 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTC-C--SSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCS
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC--CeEEEEEcCCCC-C--CCCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcc
Confidence 68999999999999999999999996 8999998 4443 2 23335689999999999 577665 4422 1111
Q ss_pred --cchHHHHhhc--CCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEccccC--CCChHHHHHHHHHh
Q 023877 96 --VVTQEFLDKH--QIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKRTD--GISTSDIIMRIVKD 158 (276)
Q Consensus 96 --~~t~e~L~~~--~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~rt~--giSTT~Ii~rI~~~ 158 (276)
....+++++. ..++++.+.+. ....+...+ .++..|..+ .+|||.|++++..+
T Consensus 77 ~~~~w~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 77 FNSIWVSYVESLTPPFDIVYSGNPL----------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp CGGGHHHHHHHHSCCCSEEECCCHH----------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred cHHHHHHHHHHhccCCCEEEECcHH----------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 1123444443 45666655311 112233344 566666544 69999999998654
No 27
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.44 E-value=6.5e-13 Score=113.64 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=84.1
Q ss_pred eEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCc----ceEee--CC
Q 023877 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWV----DEVIP--DA 93 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~V----D~Vi~--~~ 93 (276)
+++++.|+|||+|.||+.++++|++.+ |.++|+|.++...+ |..+++|.++|++|++. +... |.+.+ -+
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~p~--~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d 79 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEV--DELIICIGSAQLSH--SIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQ 79 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCS--SSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhC--CeeEEEECCCCCCc--CCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecC
Confidence 479999999999999999999999996 88999984443222 33467899999999994 5543 45532 11
Q ss_pred CC---cchHHHHhhc--CCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEccccC--CCChHHHHHHHHHh
Q 023877 94 PW---VVTQEFLDKH--QIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKRTD--GISTSDIIMRIVKD 158 (276)
Q Consensus 94 p~---~~t~e~L~~~--~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~rt~--giSTT~Ii~rI~~~ 158 (276)
.+ ....++++++ ..++++.|.+.+ .+.++..| .++.++..+ .+|||.|++++..+
T Consensus 80 ~~~~~~~w~~~~~~l~~~~~~~v~gr~~~----------~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 80 DIECNALWVGHIKMLTPPFDRVYSGNPLV----------QRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp CCSCHHHHHHHHHHHSCCCSEEECCCHHH----------HHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHCCCCCEEEECCHHH----------HHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 11 1123455543 567787775211 12344455 666666544 59999999998654
No 28
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.39 E-value=8.5e-13 Score=121.21 Aligned_cols=70 Identities=23% Similarity=0.140 Sum_probs=52.8
Q ss_pred CCCeEEEEcccccCCChHHHHHHHHHhhhCCCC---eEEEEE---cCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEe
Q 023877 18 DRPVRVYADGIYDLFHFGHARSLEQAKKSFPNT---YLLVGC---CNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVI 90 (276)
Q Consensus 18 ~r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d---~LIVGV---~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi 90 (276)
..++++++.|+|||+|.||+.++++|++.++.+ .++|++ +.+. ..| .++++.++|++|++ ++...+.+.
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~---~~K-~~l~s~~~R~~ml~~ai~~~~~~~ 81 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA---YKK-KGLIPAYHRVIMAELATKNSKWVE 81 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG---GCC-TTCCCHHHHHHHHHHHTTTCSSEE
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCC---ccc-cCCCCHHHHHHHHHHHhcCCCcEE
Confidence 345789999999999999999999999887433 366554 3332 223 46899999999999 567777665
Q ss_pred e
Q 023877 91 P 91 (276)
Q Consensus 91 ~ 91 (276)
+
T Consensus 82 v 82 (279)
T 1kqn_A 82 V 82 (279)
T ss_dssp E
T ss_pred E
Confidence 4
No 29
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.37 E-value=1.4e-12 Score=119.40 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=84.7
Q ss_pred CCeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCc--ceEe--e-C
Q 023877 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWV--DEVI--P-D 92 (276)
Q Consensus 19 r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~V--D~Vi--~-~ 92 (276)
.|+++++.|+|||+|.||+.++++|++.+ |.++|+|.++...++ | +..+|.++|++|++. +... +.+. + .
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~--d~v~v~v~~~~~p~~-~-~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~ 81 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIIILGSHRVAAD-T-RNPWRSPERMAMIEACLSPQILKRVHFLTVR 81 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEEEEEETCCCC-S-SSCSCHHHHHHHHHTTSCHHHHTTEEEEEEE
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhC--CeEEEEECCcccCCC-C-CCCCCHHHHHHHHHHHhhhccCCeEEEEECC
Confidence 35789999999999999999999999997 889998988754332 2 346899999999995 4443 3232 2 2
Q ss_pred CC------Ccc-hHHHHhhcC---CCEEEeCCCcccccCCCCchHHHHHHhc-C-eEEEccccCCCChHHHHHHHHHh
Q 023877 93 AP------WVV-TQEFLDKHQ---IDFVAHDSLPYADASGAGKDVYEFVKAA-G-KFKETKRTDGISTSDIIMRIVKD 158 (276)
Q Consensus 93 ~p------~~~-t~e~L~~~~---~D~vv~G~d~y~~~~~~~~d~y~~lk~~-G-~~~~~~rt~giSTT~Ii~rI~~~ 158 (276)
+. |.. ..+.++.+. .++++.|.+. .. ... ..+.. + .++.++....+|||.|++++.+.
T Consensus 82 d~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~-~~-----~~~--~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g 151 (341)
T 2qjo_A 82 DWLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRK-DA-----SSY--YLNLFPQWDYLETGHYPDFSSTAIRGAYFEG 151 (341)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCC-SG-----GGG--GGGSCTTSEEEECCCCTTCCHHHHHHHHHHT
T ss_pred CCcCChHHHHHHHHHHhHHhcCCCceEEEEcCCC-CC-----ChH--HHHhccccceeecccCCCCCcHHHHHHHHcC
Confidence 22 221 112333322 6777777532 11 011 12222 3 66777766789999999998654
No 30
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.33 E-value=9.6e-12 Score=117.24 Aligned_cols=145 Identities=13% Similarity=0.110 Sum_probs=99.4
Q ss_pred EEEEcccccCCChHHHHHHHHHhhhCCCCe---EEEEEcCChhhh----ccC-CCCCCCHHHHHHHHHhcCCcceEee-C
Q 023877 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTY---LLVGCCNDETTH----KFK-GKTVMTEDERYESLRHCKWVDEVIP-D 92 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~---LIVGV~sD~~~~----~~K-grpi~s~eER~e~l~~~r~VD~Vi~-~ 92 (276)
.|++.|+||.+|.||..+|++|++.+ +. ..|+++.|+... ..+ .++++|.+||+++++++. ||.|++ +
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a--~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~g-VD~v~v~~ 93 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKA--REVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFG-IDGVLVID 93 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHH--HHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTT-CSEEEEEC
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHH--HHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcC-CCEEEEcc
Confidence 68999999999999999999999874 33 467777776321 111 136899999999999985 999875 1
Q ss_pred --CCC-cc-hHHHHhh-----cCCCEEEeCCCcccccCCCCchHHHHHHhc---C-eEEEccc----cCCCChHHHHHHH
Q 023877 93 --APW-VV-TQEFLDK-----HQIDFVAHDSLPYADASGAGKDVYEFVKAA---G-KFKETKR----TDGISTSDIIMRI 155 (276)
Q Consensus 93 --~p~-~~-t~e~L~~-----~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~---G-~~~~~~r----t~giSTT~Ii~rI 155 (276)
..+ .+ ..+|++. ++++.++.|.|...+....++ .+.++++ | +++.+|. ...+|||.|++.|
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~--~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L 171 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGT--ADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFL 171 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEE--HHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHH
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCC--HHHHHHHhcCCeEEEEECcEecCCcccccchHHHHH
Confidence 111 12 3457765 578999999987654322222 3334443 5 7777775 3479999999998
Q ss_pred HHhhHHHHHHHhhcCC
Q 023877 156 VKDYNQYVMRNLDRGY 171 (276)
Q Consensus 156 ~~~y~~y~~Rnl~rg~ 171 (276)
.+.--+-..+-|-|-|
T Consensus 172 ~~G~i~~a~~lLGrpy 187 (338)
T 2x0k_A 172 SEGDVARANWALGRHF 187 (338)
T ss_dssp HTTCHHHHHHHHTSCC
T ss_pred hcCcHHHHHHhcceee
Confidence 7765555555554433
No 31
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.31 E-value=3.8e-12 Score=114.75 Aligned_cols=72 Identities=19% Similarity=0.227 Sum_probs=50.7
Q ss_pred CCeEEEEcccccCCChHHHHHHHHHhhhCCCC--eEEEEEcCChhhhccCCCCCCCHHHHHHHHH-hcCCcceEe
Q 023877 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNT--YLLVGCCNDETTHKFKGKTVMTEDERYESLR-HCKWVDEVI 90 (276)
Q Consensus 19 r~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d--~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~-~~r~VD~Vi 90 (276)
.|+++++.|+|||+|.||+.++++|++.++.+ ..+||+.-.+.....+.+++++.++|++|++ ++...+.+.
T Consensus 5 ~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~ 79 (252)
T 1nup_A 5 IPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIR 79 (252)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEE
T ss_pred CceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceE
Confidence 36789999999999999999999999987433 2565432222111112246899999999999 576655543
No 32
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.29 E-value=1.4e-11 Score=113.66 Aligned_cols=128 Identities=13% Similarity=0.071 Sum_probs=80.0
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCc----ceE--ee-
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWV----DEV--IP- 91 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~V----D~V--i~- 91 (276)
|+++++.|+|||+|.||+.++++|++++ |+|||+|++++..++ .++.+|.++|++||+. ++.. +.+ +.
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~~~~~v~~~~~~~~--~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~ 82 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIINIGSCFNTPN--IKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPL 82 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEEEEEESCCCC--SSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEE
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhC--CcEEEEECCCCCCcc--cCCCCCHHHHHHHHHHHhccccCccceEEEEEc
Confidence 4789999999999999999999999997 899999998764332 2467999999999994 5321 223 22
Q ss_pred CCC---CcchHHHHhhc-------CCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccccCCCChHHHHHHHHH
Q 023877 92 DAP---WVVTQEFLDKH-------QIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVK 157 (276)
Q Consensus 92 ~~p---~~~t~e~L~~~-------~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~rt~giSTT~Ii~rI~~ 157 (276)
++. .....+++++. .+++++.|... ...+.+..+...-..+..+....+|+|.|++++..
T Consensus 83 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 83 ADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIK------DSSSYYIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp ECCTTCHHHHHHHHHHHHTTTSCSSCCEEECCBSS------SSHHHHHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred CCCcCChHHHHHHHHHHHHHhcccCCeEEEEcCCC------CcchhhhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 222 11223433321 24666666411 11121111111012333344467999999998764
No 33
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.23 E-value=3.3e-11 Score=112.40 Aligned_cols=148 Identities=17% Similarity=0.105 Sum_probs=102.0
Q ss_pred EEEEcccccCCChHHHHHHHHHhhhCCCCe-EEEEEcCChh----hhc---cCCCCCCCHHHHHHHHHhcCCcceEeeCC
Q 023877 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTY-LLVGCCNDET----THK---FKGKTVMTEDERYESLRHCKWVDEVIPDA 93 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~-LIVGV~sD~~----~~~---~Kgrpi~s~eER~e~l~~~r~VD~Vi~~~ 93 (276)
.|++-|.||-+|.||..+|++|++.....- -.|.++-|+. ..+ .+.++++|.+||+++++++. ||.+++-
T Consensus 22 ~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG-VD~v~~~- 99 (308)
T 3op1_A 22 SVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELYLL- 99 (308)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEEEE-
T ss_pred eEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC-CCEEEEe-
Confidence 699999999999999999999999852111 1444554542 111 11136999999999999996 9999751
Q ss_pred CCc-----c-hHHH----HhhcCCCEEEeCCCcccccCCCCchHHHHHHhcC--eEEEccc----cCCCChHHHHHHHHH
Q 023877 94 PWV-----V-TQEF----LDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG--KFKETKR----TDGISTSDIIMRIVK 157 (276)
Q Consensus 94 p~~-----~-t~e~----L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G--~~~~~~r----t~giSTT~Ii~rI~~ 157 (276)
|++ + ..+| +.+++++.++.|.|...+. ..++ .+.++++| ++..++. ...+|||.|++.|.+
T Consensus 100 ~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~--~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~ 176 (308)
T 3op1_A 100 DFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKT--AEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILD 176 (308)
T ss_dssp CCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBC--STTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHH
T ss_pred cCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCC--HHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHc
Confidence 221 1 2334 4568999999999765432 2221 33466666 4777764 457999999999987
Q ss_pred hhHHHHHHHhhcCCCcc
Q 023877 158 DYNQYVMRNLDRGYSRK 174 (276)
Q Consensus 158 ~y~~y~~Rnl~rg~~~~ 174 (276)
.--+-..+-|-|-|+..
T Consensus 177 G~v~~A~~lLGrpy~i~ 193 (308)
T 3op1_A 177 GNVKEAGKLLGAPLPSR 193 (308)
T ss_dssp TCHHHHHHHHSSCCEEE
T ss_pred CCHHHHHhhcCcceeEE
Confidence 77677777777766653
No 34
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=3.6e-09 Score=100.46 Aligned_cols=145 Identities=18% Similarity=0.219 Sum_probs=98.4
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChh--hhccCCC-CCCCHHHHHHHHHhcCCcceEeeC-CCC
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDET--THKFKGK-TVMTEDERYESLRHCKWVDEVIPD-APW 95 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~--~~~~Kgr-pi~s~eER~e~l~~~r~VD~Vi~~-~p~ 95 (276)
++.|.+-|.||+||.||..++++|++ . + ++++|.+-.+ ++ +|. .++|.++|++++..+ .||.|++- ..+
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a~~-~--~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~-GvD~vielpF~~ 124 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE-H--G-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRA-GADIVVEGPPMG 124 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT-S--S-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHH-TCSEEEECCCGG
T ss_pred CCEEEEEEecCccCHHHHHHHHHHHH-c--C-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHC-CCCEEEEcCchh
Confidence 45899999999999999999999999 2 4 6666666444 44 344 489999999999987 79999762 222
Q ss_pred c-chHHHHh-------hcCCCEEEeCCCccccc-------C-------------------------CCCchH---H-HHH
Q 023877 96 V-VTQEFLD-------KHQIDFVAHDSLPYADA-------S-------------------------GAGKDV---Y-EFV 131 (276)
Q Consensus 96 ~-~t~e~L~-------~~~~D~vv~G~d~y~~~-------~-------------------------~~~~d~---y-~~l 131 (276)
. .+.+|++ +++++.+|.|..+-.+. . ...++. | +.+
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~~~~~~~~~~~~~i~~~~~~~~kp~~~~g~ey~~~~~~~l~~pn~il~~y~kai 204 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGYIPEKTMEKVIDCINKGYHIQVKPYKIICIETGEILGEKLNIDNYVIASMSQMI 204 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEECCCHHHHHHHHHHHTTCCEEEETTEEEETTTCCEEESCCCGGGHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECCCCchhHHHHHHHHhcccccccccchhccCcHHHHHHHhccCCChHHHHHHHHH
Confidence 2 2345554 57999999996221110 0 001111 0 112
Q ss_pred Hh-------cC-eEEEccccCCCChHHHHHHHHHh----hH--------HHHHHHhhcCC
Q 023877 132 KA-------AG-KFKETKRTDGISTSDIIMRIVKD----YN--------QYVMRNLDRGY 171 (276)
Q Consensus 132 k~-------~G-~~~~~~rt~giSTT~Ii~rI~~~----y~--------~y~~Rnl~rg~ 171 (276)
.+ .+ +++.+||...+|+|.|++.|.++ +. .|+++..+.|-
T Consensus 205 ~~~~~~~~~~~i~~~~i~R~~~~SAS~IR~~i~~g~~~~~~~lVP~~t~~~l~~~~~~G~ 264 (357)
T 3gmi_A 205 YKLNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKELYDNGK 264 (357)
T ss_dssp HHHHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTTCGGGTGGGSCHHHHHHHHHHHHTTC
T ss_pred HHhCcCcCCCCCeEEEecCCCcccHHHHHHHHHcCChhHHHhcCChHHHHHHHHHHhcCC
Confidence 22 12 67888998899999999999765 21 57777777765
No 35
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.50 E-value=3.5e-07 Score=84.30 Aligned_cols=69 Identities=12% Similarity=0.075 Sum_probs=54.1
Q ss_pred CeEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCCh--hhhccC-CCCCCCHHHHHHHHHhcCCcceEeeC
Q 023877 20 PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDE--TTHKFK-GKTVMTEDERYESLRHCKWVDEVIPD 92 (276)
Q Consensus 20 ~~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~--~~~~~K-grpi~s~eER~e~l~~~r~VD~Vi~~ 92 (276)
.+++++ |+||-+|.||+.+|++|++.+ |.+||++..++ +....+ .+.+.+.++|+++++++. ||.|+.+
T Consensus 22 ~~V~~v-gtfdgLH~GH~sLI~~A~~~a--d~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~G-VD~vf~p 93 (280)
T 2ejc_A 22 KTIGFV-PTMGYLHEGHLSLVRRARAEN--DVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKEN-VDCIFHP 93 (280)
T ss_dssp CCEEEE-EECSCCCHHHHHHHHHHHHHS--SEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTT-CSEEECC
T ss_pred CEEEEE-cCCccccHHHHHHHHHHHHhC--CEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCC-CCEEEeC
Confidence 345666 999999999999999999995 89999995554 332211 123788999999999997 9999874
No 36
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=97.99 E-value=3.2e-05 Score=74.30 Aligned_cols=132 Identities=13% Similarity=0.050 Sum_probs=81.3
Q ss_pred eEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCc---ceEe---eCC
Q 023877 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWV---DEVI---PDA 93 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~V---D~Vi---~~~ 93 (276)
+.|+..|+|||+|.||..+.++|.+.+..|.|++-....+ .| .--.+.+.|++|++. +... +.|+ .+.
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~ 267 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 267 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechH
Confidence 3577799999999999999999999875566654444332 13 346899999999995 4332 3232 222
Q ss_pred CC---cchHH----HH-hhcCCCEEEeCCCcc--cccCCCCchHHHHHHh------cC-eEEEccc--------------
Q 023877 94 PW---VVTQE----FL-DKHQIDFVAHDSLPY--ADASGAGKDVYEFVKA------AG-KFKETKR-------------- 142 (276)
Q Consensus 94 p~---~~t~e----~L-~~~~~D~vv~G~d~y--~~~~~~~~d~y~~lk~------~G-~~~~~~r-------------- 142 (276)
+. +.+.. .+ +.+++.+++.|.|.. .+..+| .+..++++. .| +++.++|
T Consensus 268 ~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~-~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~~~~~~ 346 (396)
T 1jhd_A 268 DMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGA-FDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMMR 346 (396)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCT-THHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEGG
T ss_pred HhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCc-chHHHHHHhcccccccceeEEecccceecCCCCeEEEcc
Confidence 21 11221 22 334888999998764 222222 233445554 34 5555443
Q ss_pred ---------cCCCChHHHHHHHHHh
Q 023877 143 ---------TDGISTSDIIMRIVKD 158 (276)
Q Consensus 143 ---------t~giSTT~Ii~rI~~~ 158 (276)
...+|+|+|++++.+.
T Consensus 347 ~~p~~~~~~~~~ISgT~IR~~L~~G 371 (396)
T 1jhd_A 347 DVPDHTKEDFVLLSGTKVREMLGQG 371 (396)
T ss_dssp GCTTCCGGGEECCCHHHHHHHHHTT
T ss_pred ccCcccCCCccccCHHHHHHHHHCC
Confidence 1258999999887654
No 37
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=97.80 E-value=2.8e-05 Score=71.42 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=51.6
Q ss_pred EEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC---CCCCCHHHHHHHHHhcCCcceEee
Q 023877 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG---KTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg---rpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
.|.+-|. +|.||..++++|++.+ +.+||.+..++..--... +.+.+.++|.+.++.+. ||.++.
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a--~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~ 87 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARREN--PFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG-VDLLFA 87 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHC--SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEEC
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhC--CEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEe
Confidence 4667888 9999999999999995 899999998874322111 35899999999999874 998875
No 38
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=97.61 E-value=0.00067 Score=64.09 Aligned_cols=90 Identities=10% Similarity=-0.077 Sum_probs=59.5
Q ss_pred eEEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHh-cCCc---ceEee-CCCC
Q 023877 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH-CKWV---DEVIP-DAPW 95 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~-~r~V---D~Vi~-~~p~ 95 (276)
+.|+..|+|||+|.||..+.++|.+.. |.|++-..-.+ .| ..-.+.+.|++|++. ++.. +.|+. ..|+
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~--d~vll~P~~g~----~K-~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~ 228 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELA--DGVLVHPILGA----KK-PDDFPTEVIVEAYQALIRDFLPQERVAFFGLAT 228 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHS--SEEEEEEBCSC----CC-TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCS
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhC--CcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhhcCCCcceEEEechH
Confidence 356779999999999999999999984 77666544333 13 346999999999995 4432 23332 2222
Q ss_pred c-----chHH----HHh-hcCCCEEEeCCCcc
Q 023877 96 V-----VTQE----FLD-KHQIDFVAHDSLPY 117 (276)
Q Consensus 96 ~-----~t~e----~L~-~~~~D~vv~G~d~y 117 (276)
. .+.. .++ .+++.+++.|.|..
T Consensus 229 ~m~~aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 229 PMRYAGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred HhhcCCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 1 1222 122 34788999998754
No 39
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=96.71 E-value=0.0062 Score=56.03 Aligned_cols=66 Identities=14% Similarity=0.084 Sum_probs=50.6
Q ss_pred eEEE--EcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC---CCCCCHHHHHHHHHhcCCcceEeeC
Q 023877 21 VRVY--ADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG---KTVMTEDERYESLRHCKWVDEVIPD 92 (276)
Q Consensus 21 ~~V~--~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg---rpi~s~eER~e~l~~~r~VD~Vi~~ 92 (276)
++++ +-|. +|.||..++++|++.+ +.+||.+..++..--... ..+.+.+++.+.++.+ .||.++.+
T Consensus 24 ~I~fVpTmG~---lH~GH~~LI~~a~~~a--~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf~p 94 (283)
T 3ag6_A 24 TIGFIPTMGA---LHDGHLTMVRESVSTN--DITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVFHP 94 (283)
T ss_dssp CEEEEEECSS---CCHHHHHHHHHHHTTS--SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEECC
T ss_pred cEEEEECCcc---ccHHHHHHHHHHHHhC--CEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC
Confidence 4544 7885 9999999999999995 789999987764322111 2488999999999987 48988763
No 40
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=96.41 E-value=0.009 Score=55.44 Aligned_cols=65 Identities=18% Similarity=0.137 Sum_probs=49.0
Q ss_pred EEcccccCCChHHHHHHHHHhh-hCCCCeEEEEEcCChhhhccCC---CCCCCHHHHHHHHHhcCCcceEee
Q 023877 24 YADGIYDLFHFGHARSLEQAKK-SFPNTYLLVGCCNDETTHKFKG---KTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 24 ~~~G~FD~fH~GHl~~L~qAk~-l~~~d~LIVGV~sD~~~~~~Kg---rpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
.+..++.-+|.||+.++++|++ .+ +.+||.+..++.---... +.+.+.+++.+.++.+ .||.|+.
T Consensus 36 g~VpTmG~LH~GH~sLI~~A~~~~a--~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~ 104 (301)
T 3cov_A 36 MLVPTMGALHEGHLALVRAAKRVPG--SVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFT 104 (301)
T ss_dssp EEEEECSCCCHHHHHHHHHHHTSTT--EEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEEC
T ss_pred EEEecCCcccHHHHHHHHHHHHhcC--CEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEe
Confidence 3444555599999999999999 74 889999988764322111 2488999999999987 4888876
No 41
>1peh_A Pepnh1; transferase, nucleotidyltransferase, repeat, phospholipid biosynthesis, membrane, phosphorylation; NMR {Rattus norvegicus} SCOP: j.14.1.1
Probab=96.07 E-value=4e-05 Score=48.73 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=30.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 023877 181 VKEKRLRVNMKLKKLQEKVKQQQERVGEKVFALL 214 (276)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (276)
++|++++||+.+|++++++++++|++++.|+.|+
T Consensus 1 InEKky~lQ~~VDk~K~kvk~VEeksK~~V~~vE 34 (35)
T 1peh_A 1 XNEKKYHLQERVDKVKKKVKDVEEKSKEWVQKVE 34 (35)
T ss_dssp -CCTTTCCSSSTTGGGGGTTGGGTTTHHHHHHHC
T ss_pred CchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcc
Confidence 3578999999999999999999999999999875
No 42
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.99 E-value=0.013 Score=54.11 Aligned_cols=65 Identities=20% Similarity=0.161 Sum_probs=46.3
Q ss_pred CeEEE--EcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC----CCCCCHHHHHHHHHhcCCcceEee
Q 023877 20 PVRVY--ADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG----KTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 20 ~~~V~--~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg----rpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
.++++ +.|. +|.||+.++++|++.+ |.+||+|--++.--. .+ +.+-+.++=.+.++.. .||.|+.
T Consensus 25 ~~IgfVPTMG~---LH~GHlsLv~~Ar~~~--d~vVVSIFVNP~QF~-~~EDl~~YPRtle~D~~~l~~~-gvd~vF~ 95 (287)
T 3q12_A 25 KRIALVPTMGN---LHEGHMTLVDEAKTRA--DVVVVTIFVNPLQFE-RPDDLAHYPRTLQEDCEKLTRH-GADLVFA 95 (287)
T ss_dssp CCEEEEEECSS---CCHHHHHHHHHHHTTS--SEEEEEECCCGGGCS-SHHHHHHSCCCHHHHHHHHHHH-TCSEEEC
T ss_pred CeEEEEcCCCc---ccHHHHHHHHHHHHhC--CEEEEEeccCcccCC-CcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 45666 7786 9999999999999995 999999987763211 11 1356677777777765 4676654
No 43
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=95.89 E-value=0.032 Score=52.03 Aligned_cols=66 Identities=17% Similarity=0.148 Sum_probs=49.3
Q ss_pred CeEEE--EcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccC---CCCCCCHHHHHHHHHhcCCcceEee
Q 023877 20 PVRVY--ADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK---GKTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 20 ~~~V~--~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~K---grpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
.++++ +.| -+|.||+.++++|++.+ |.+||.|--++.--... .+.+-+.++.+++++.. .||.|+.
T Consensus 43 ~~IgfVPTMG---~LH~GHlsLi~~A~~~~--d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-GvD~vF~ 113 (314)
T 3inn_A 43 KKIGFVPTMG---YLHKGHLELVRRARVEN--DVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QVDYLFA 113 (314)
T ss_dssp CCEEEEEECS---SCCHHHHHHHHHHHHHC--SEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TCSEEEC
T ss_pred CeEEEEcCCC---ccCHHHHHHHHHHHHhC--CEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CCCEEEC
Confidence 34666 667 49999999999999995 99999998776422111 02478899999998876 5787765
No 44
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=95.48 E-value=0.027 Score=51.77 Aligned_cols=66 Identities=15% Similarity=0.020 Sum_probs=50.7
Q ss_pred EEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccC---CCCCCCHHHHHHHHHhcCCcceEee
Q 023877 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK---GKTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 23 V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~K---grpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
|-+-.+..=+|.||+.++++|++.+ |.+||.+..++..-... .+.+.+.+++.++++.+ .||.|+.
T Consensus 24 ig~VPTMG~LH~GH~sLi~~A~~~~--d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 24 TAFVPTMGNLHEGHLSLMRLARQHG--DPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp CEEEEECSSCCHHHHHHHHHHHTTC--SSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred EEEECCCCcccHHHHHHHHHHHHhC--CEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 4556788899999999999999995 78999998776431100 13589999999999876 5777764
No 45
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=94.48 E-value=0.085 Score=48.56 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=41.5
Q ss_pred CCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC----CCCCCHHHHHHHHHhcCCcceEee
Q 023877 31 LFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG----KTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 31 ~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg----rpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
-+|-||+.++++|++ + |.+||.|.-++.--. .+ +.+-+.++=.+.++.. .||.|+.
T Consensus 35 aLH~GHlsLv~~Ar~-~--d~VVVSIFVNP~QF~-~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 35 FLHDGHLSLVKHAKT-Q--DKVIVSIFVNPMQFG-PNEDFSSYPRDLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp SCCHHHHHHHHHHTT-S--SEEEEEECCCGGGCC-TTSCTTTSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cccHHHHHHHHHHHh-C--CEEEEEeccCccccC-CchhhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 499999999999999 6 899999987664211 11 2467777777887765 5777764
No 46
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=93.58 E-value=0.099 Score=47.62 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=43.2
Q ss_pred ccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCC----CCCCCHHHHHHHHHhcCCcceEee
Q 023877 27 GIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG----KTVMTEDERYESLRHCKWVDEVIP 91 (276)
Q Consensus 27 G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kg----rpi~s~eER~e~l~~~r~VD~Vi~ 91 (276)
-+---+|-||+.++++|++.+ |.+||.|--++.--. .+ +.+-+.++=.+.++.. .||.|+.
T Consensus 30 PTMGaLH~GHlsLv~~Ar~~~--d~vVVSIFVNP~QF~-~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 30 PTMGALHNGHISLIKKAKSEN--DVVIVSIFVNPTQFN-NPNDYQTYPNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp EECSSCCHHHHHHHHHHHHHC--SEEEEEECCCGGGCS-CHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred CCCcchhHHHHHHHHHHHHhC--CEEEEEEccCcccCC-CcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 355579999999999999995 899999987753111 11 1356677777777765 5777664
No 47
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=89.57 E-value=8.7 Score=36.62 Aligned_cols=88 Identities=11% Similarity=0.003 Sum_probs=50.6
Q ss_pred eEEEEcccccCCChHHHHHHHHH-hhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcC--C-cceEee-CCCC
Q 023877 21 VRVYADGIYDLFHFGHARSLEQA-KKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK--W-VDEVIP-DAPW 95 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qA-k~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r--~-VD~Vi~-~~p~ 95 (276)
+.|+...+.||+|.||..++.+| .+.. +-|+|--. +-..| .-=++.+-|+++.+++- + -+.|+. .-|+
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~--~~lllhPl----vG~tK-~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~ 260 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREAN--AKVLIHPV----VGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPL 260 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTT--CEEEECCB----CSBCC-TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcC--CcEEEEEC----CCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEEecch
Confidence 35778999999999996555555 4543 43333211 11112 12589999999998752 2 134432 2222
Q ss_pred -----cchHH----HH-hhcCCCEEEeCCC
Q 023877 96 -----VVTQE----FL-DKHQIDFVAHDSL 115 (276)
Q Consensus 96 -----~~t~e----~L-~~~~~D~vv~G~d 115 (276)
+.... .+ +.+++..++.|-|
T Consensus 261 ~mryAGPrEai~HAiiRkN~GcthfIVGRD 290 (395)
T 1r6x_A 261 AMRMSGDREAVWHAIIRKNYGASHFIVGRD 290 (395)
T ss_dssp BCCCCHHHHHHHHHHHHHHTTCSEEEECTT
T ss_pred hhhhcCcHHHHHHHHHHHHcCCceEEECCC
Confidence 12222 23 3358999999865
No 48
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=88.53 E-value=8.1 Score=37.86 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=51.2
Q ss_pred eEEEEcccccCCChHHHHHHH-HHhhhCCCCeEEE-EEcCChhhhccCCCCCCCHHHHHHHHHhcC--C-cceEee-CCC
Q 023877 21 VRVYADGIYDLFHFGHARSLE-QAKKSFPNTYLLV-GCCNDETTHKFKGKTVMTEDERYESLRHCK--W-VDEVIP-DAP 94 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~-qAk~l~~~d~LIV-GV~sD~~~~~~Kgrpi~s~eER~e~l~~~r--~-VD~Vi~-~~p 94 (276)
+.|+...+.||+|.||..++. .|.+.. +.|+| -+.. . .| .-=++.+-|+++.+.+- + -+.|+. .-|
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~--~~lll~pl~g-~----~k-~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p 260 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREAN--AKVLIHPVVG-L----TK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLP 260 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHT--CEEEEEEBCS-B----CS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcC--CcEEEEECCC-C----CC-CCCCCHHHHHHHHHHHHHhCCcccEEEEecc
Confidence 357778999999999965555 455554 43333 3322 1 12 12589999999998752 2 134432 123
Q ss_pred Cc-----chHH----HH-hhcCCCEEEeCCC
Q 023877 95 WV-----VTQE----FL-DKHQIDFVAHDSL 115 (276)
Q Consensus 95 ~~-----~t~e----~L-~~~~~D~vv~G~d 115 (276)
+. .... .+ +.+++..++.|-|
T Consensus 261 ~~m~yaGprea~~hai~r~n~G~th~IvGrd 291 (511)
T 1g8f_A 261 LAMRMSGDREAVWHAIIRKNYGASHFIVGRD 291 (511)
T ss_dssp CBCCCCHHHHHHHHHHHHHHTTCSEEECCTT
T ss_pred hhhhccCcHHHHHHHHHHHhCCCceEEeCCC
Confidence 21 2222 23 3368999998865
No 49
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=70.47 E-value=5.9 Score=24.11 Aligned_cols=25 Identities=24% Similarity=0.644 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh
Q 023877 188 VNMKLKKLQEKVKQQQERVGEKVFA 212 (276)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (276)
+.+.+.+|+.++++...++++++|-
T Consensus 2 lrkrlrkfrnkikeklkkigqkiqg 26 (32)
T 1lyp_A 2 LRKRLRKFRNKIKEKLKKIGQKIQG 26 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456777888888877888887764
No 50
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=69.80 E-value=6.8 Score=38.48 Aligned_cols=56 Identities=14% Similarity=-0.058 Sum_probs=40.3
Q ss_pred eEEEEcccccCCChHHHHHHHHHhh-hCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhc
Q 023877 21 VRVYADGIYDLFHFGHARSLEQAKK-SFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHC 83 (276)
Q Consensus 21 ~~V~~~G~FD~fH~GHl~~L~qAk~-l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~ 83 (276)
+.|+..=+++|+|.||..++++|.. .+ +.|+|-...-. .| ..-++.+-|++.++++
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~--~~llv~p~~g~----~k-~~di~~~~R~~~~~~~ 220 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVG--GGLLLHPVVGL----TK-PGDVDVYTRMRIYKVL 220 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHT--SEEEECCBCSB----CC-TTSCCHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcC--CcEEEEeCcCC----CC-CCCCCHHHHHHHHHHH
Confidence 3577788999999999999999996 55 55555332211 12 1358999999998875
No 51
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=67.16 E-value=46 Score=29.94 Aligned_cols=25 Identities=20% Similarity=0.246 Sum_probs=8.1
Q ss_pred CCCCCCCCCCCCCCCCCeEEEEccc
Q 023877 4 ANSNNSNSTDTAPSDRPVRVYADGI 28 (276)
Q Consensus 4 ~~~~~~~~~~~~~~~r~~~V~~~G~ 28 (276)
-|+||+..+.++..+++.++.+.|+
T Consensus 11 ~~~~~~~~~~~~~~m~~~rigiIG~ 35 (350)
T 3rc1_A 11 ENLYFQGHMENPANANPIRVGVIGC 35 (350)
T ss_dssp ---------------CCEEEEEESC
T ss_pred cceeeeccCCCCCCCCceEEEEEcC
Confidence 3778888888888888878888886
No 52
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=58.06 E-value=7.5 Score=38.45 Aligned_cols=87 Identities=13% Similarity=0.006 Sum_probs=52.6
Q ss_pred EEEEcccccCCChHHHHHHHHHhhhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcC--Cc-ceEee---CCC-
Q 023877 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK--WV-DEVIP---DAP- 94 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r--~V-D~Vi~---~~p- 94 (276)
.|+..=+++|+|.||..++++|.... ++.|+|-...-. .| ..-++.+-|++.++.+- +- +.|+. +.+
T Consensus 192 ~v~afqtrnP~Hr~H~~l~~~a~~~~-~~~llv~pl~g~----~k-~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 192 RVVAFQTRNPMHRAHRELTVRAARSR-QANVLIHPVVGL----TK-PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp SEEEECCSSCCCHHHHHHHHHHHHHT-TCEEEECCBCCC----CC-TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred eEEEEeeCCCcchhhHHHHHHHHHhc-CCcEEEEeCCCC----CC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 46678889999999999999998662 355555321111 12 13578999999998752 21 33433 222
Q ss_pred -C-cch-----HHHHhhcCCCEEEeCC
Q 023877 95 -W-VVT-----QEFLDKHQIDFVAHDS 114 (276)
Q Consensus 95 -~-~~t-----~e~L~~~~~D~vv~G~ 114 (276)
+ +.. +-+-+.+++..++.|-
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgr 292 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGR 292 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECT
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECC
Confidence 1 111 1234456888888774
No 53
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=52.89 E-value=5.3 Score=35.20 Aligned_cols=51 Identities=14% Similarity=0.066 Sum_probs=40.6
Q ss_pred hhhhhhhhhhhhccccC-CC----CCccccchh---hHHhhhhhcCcceeEEEEeeCCc
Q 023877 209 KVFALLCHSIKAFCTFP-FP----FPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNGR 259 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~-~~----~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~ 259 (276)
++.++|+..+|.|...+ .| ......+|| ++|..+..+|.++.+.+.+|...
T Consensus 10 ~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~ 68 (319)
T 3pl2_A 10 EVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDP 68 (319)
T ss_dssp SEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSH
T ss_pred CEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCH
Confidence 67899999999988764 23 222577898 78889999999999999999653
No 54
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=52.87 E-value=1.8 Score=39.57 Aligned_cols=50 Identities=18% Similarity=0.097 Sum_probs=39.9
Q ss_pred hhhhhhhhhhhhcccc--CC-----CCC------ccccchh--hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTF--PF-----PFP------VFVFLDA--SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~--~~-----~~~------~~~f~gg--~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.|+.. +| |.| ....+|| ++|..+..+|+++.+.+.+|..
T Consensus 55 ~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~~NvA~~la~LG~~v~~ig~vG~D 119 (352)
T 4e84_A 55 RVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGAANVARNAVTLGGQAGLLCVVGCD 119 (352)
T ss_dssp EEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEHHHHHHHHHHTTCEEEEEEEEESS
T ss_pred cEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChHHHHHHHHHHcCCCEEEEEEeCCC
Confidence 7999999999999872 21 322 3567888 7777899999999999999964
No 55
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=51.18 E-value=5.5 Score=34.76 Aligned_cols=51 Identities=14% Similarity=0.054 Sum_probs=40.2
Q ss_pred hhhhhhhhhhhhccccCC-CC---------Cccccchh---hHHhhhhhcCcceeEEEEeeCCc
Q 023877 209 KVFALLCHSIKAFCTFPF-PF---------PVFVFLDA---SWRAFDLSYGIQTRLLLVLKNGR 259 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~---------~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~ 259 (276)
++.++|+..+|.+...++ |. .....+|| ++|..+..+|.++.+.+.+|...
T Consensus 4 ~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~ 67 (304)
T 3ry7_A 4 KVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDG 67 (304)
T ss_dssp EEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSC
T ss_pred cEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCh
Confidence 577889999999987763 22 23567888 78889999999999999999643
No 56
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=47.16 E-value=4.9 Score=35.75 Aligned_cols=50 Identities=10% Similarity=0.027 Sum_probs=41.0
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+..+++ |.+ ....+|| ++|..+..+|.++.+.+.+|..
T Consensus 21 ~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D 82 (310)
T 3go6_A 21 RVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDD 82 (310)
T ss_dssp EEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSS
T ss_pred CEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCC
Confidence 578999999999988774 332 3567898 7888999999999999999964
No 57
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=46.12 E-value=5.4 Score=35.48 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=40.9
Q ss_pred hhhhhhhhhhhhhccccCC-CCC-------ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 208 EKVFALLCHSIKAFCTFPF-PFP-------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 208 ~~~~~~~~~~id~~~~~~~-~~~-------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
.++.++|+..+|.+...+. |.+ ....+|| ++|..+..+|.++.+.+.+|..
T Consensus 7 ~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D 68 (328)
T 3kzh_A 7 PYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGND 68 (328)
T ss_dssp CCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSS
T ss_pred CcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCc
Confidence 3677899999999988763 221 3567898 7788999999999999999964
No 58
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=45.79 E-value=7.5 Score=34.02 Aligned_cols=51 Identities=10% Similarity=0.058 Sum_probs=39.9
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCCc
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNGR 259 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~ 259 (276)
++.++|+..+|.+...++ |.+ ....+|| ++|..+..+|+++.+.+.+|...
T Consensus 6 ~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~ 68 (309)
T 1rkd_A 6 SLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDS 68 (309)
T ss_dssp EEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESST
T ss_pred eEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCH
Confidence 577889999999887663 322 3456788 68889999999999999999643
No 59
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=45.59 E-value=7.3 Score=34.76 Aligned_cols=50 Identities=10% Similarity=0.032 Sum_probs=40.0
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.+...++ |.+ ....+|| ++|..+..+|.++.+.+.+|..
T Consensus 26 ~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D 87 (331)
T 2fv7_A 26 AVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKD 87 (331)
T ss_dssp SEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESS
T ss_pred CEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCC
Confidence 578899999999988763 322 2456788 6888999999999999999964
No 60
>3gfv_A Uncharacterized ABC transporter solute-binding protein YCLQ; alpha-beta-sandwich, periplasmic binding protein fold (PBP fold); 1.75A {Bacillus subtilis subsp}
Probab=43.00 E-value=1.2e+02 Score=26.21 Aligned_cols=43 Identities=5% Similarity=-0.093 Sum_probs=30.6
Q ss_pred CCCCcchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccc
Q 023877 92 DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKR 142 (276)
Q Consensus 92 ~~p~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~r 142 (276)
+....+..|-|..++||+|+... + ..+.++.+++.|.++.++.
T Consensus 81 G~~~~~n~E~i~~l~PDlIi~~~--~------~~~~~~~L~~~~p~v~~~~ 123 (303)
T 3gfv_A 81 GSLKEPDFDKVAELDPDLIIISA--R------QSESYKEFSKIAPTIYLGV 123 (303)
T ss_dssp BCSSSBCHHHHHHTCCSEEEECG--G------GGGGHHHHHHHSCEEECCC
T ss_pred CCCCCCCHHHHHhCCCCEEEEcC--c------chhHHHHHHhhCCEEEEcC
Confidence 33445678999999999998642 1 1356888888887777653
No 61
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=42.42 E-value=5.6 Score=34.95 Aligned_cols=50 Identities=20% Similarity=0.192 Sum_probs=40.1
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.+...++ |.+ ....+|| ++|..+..+|.++.+.+.+|..
T Consensus 4 ~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D 65 (299)
T 3ikh_A 4 RVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGND 65 (299)
T ss_dssp CEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSS
T ss_pred eEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCC
Confidence 567889999999988774 333 3567888 7788899999999999999854
No 62
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=41.55 E-value=7.3 Score=34.46 Aligned_cols=51 Identities=12% Similarity=-0.022 Sum_probs=39.5
Q ss_pred hhhhhhhhhhhhccccC-CCCC-------ccccchh---hHHhhhhhcCcceeEEEEeeCCc
Q 023877 209 KVFALLCHSIKAFCTFP-FPFP-------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNGR 259 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~-~~~~-------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~ 259 (276)
++.++|+..+|-+...+ .|.+ ....+|| ++|..+..+|.++.+.+.+|...
T Consensus 5 ~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~ 66 (317)
T 2nwh_A 5 KILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDV 66 (317)
T ss_dssp EEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSH
T ss_pred eEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCc
Confidence 46678999999888766 3332 2456788 78889999999999999999643
No 63
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=40.88 E-value=8.3 Score=34.06 Aligned_cols=52 Identities=6% Similarity=-0.031 Sum_probs=40.5
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCCcc
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNGRL 260 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~~ 260 (276)
++.++|+..+|.+...++ |.+ ....+|| ++|..+..+|+++.+.+.+|.+..
T Consensus 19 ~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~ 82 (312)
T 2hlz_A 19 QILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHV 82 (312)
T ss_dssp EEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHH
T ss_pred cEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchH
Confidence 577889999999887663 332 2456788 688889999999999999996543
No 64
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=40.50 E-value=9.9 Score=33.62 Aligned_cols=52 Identities=8% Similarity=0.048 Sum_probs=39.7
Q ss_pred hhhhhhhhhhhhccccC-CC----CCccccchh---hHHhhhhhcCcceeEEEEeeCCcc
Q 023877 209 KVFALLCHSIKAFCTFP-FP----FPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNGRL 260 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~-~~----~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~~ 260 (276)
++.++|+..+|-+.... +| ......+|| ++|..+..+|.++.+.+.+|....
T Consensus 13 ~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~ 72 (332)
T 2qcv_A 13 DLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQH 72 (332)
T ss_dssp EEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHH
T ss_pred cEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHH
Confidence 56788999999887653 34 223567888 788899999999999999986543
No 65
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=40.06 E-value=8.1 Score=34.43 Aligned_cols=50 Identities=6% Similarity=-0.058 Sum_probs=40.2
Q ss_pred hhhhhhhhhhhhccccCC-CC---Cccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-PF---PVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~---~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+...+. |. .....+|| ++|..+..+|.++.+.+.+|..
T Consensus 6 ~v~viG~~~iD~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D 62 (338)
T 3ljs_A 6 TILCFGEALIDMLAQPLVKKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSD 62 (338)
T ss_dssp EEEEESCCEEEEEECCCSSTTSCCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESS
T ss_pred CEEEEChhhhheeccCCCCccchhceeecCCChHHHHHHHHHhCCCCEEEEeeccCC
Confidence 577889999999987764 32 33667899 6788899999999999999964
No 66
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=38.88 E-value=6.1 Score=35.02 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=40.5
Q ss_pred hhhhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcc-eeEEEEeeCC
Q 023877 207 GEKVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQ-TRLLLVLKNG 258 (276)
Q Consensus 207 ~~~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~-~~~~~~~~~~ 258 (276)
-.++.++|...+|.++..++ |.+ ....+|| ++|..+..+|.+ +.+.+.+|..
T Consensus 14 ~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D 78 (311)
T 1vm7_A 14 FLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGND 78 (311)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSS
T ss_pred cCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCC
Confidence 34567899999999998874 332 2345788 688889999999 9999999964
No 67
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=38.34 E-value=10 Score=33.17 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=38.8
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+...++ |.+ ....+|| ++|..+..+|.++.+.+.+|..
T Consensus 7 ~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D 68 (302)
T 2c4e_A 7 KITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYD 68 (302)
T ss_dssp EEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTT
T ss_pred cEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCC
Confidence 467789999999887653 322 3456788 6788999999999999999953
No 68
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=38.08 E-value=9.3 Score=34.17 Aligned_cols=50 Identities=8% Similarity=-0.088 Sum_probs=39.3
Q ss_pred hhhhhhhhhhhhccccC----CCCCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFP----FPFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~----~~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+...+ +.......+|| ++|..+..+|.++.+.+.+|..
T Consensus 28 ~vlviG~~~iD~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D 84 (336)
T 4du5_A 28 DVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTD 84 (336)
T ss_dssp EEEEECCCEEEEEESSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred CEEEEChhhhhccCCCCCccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCC
Confidence 67899999999776543 12234678898 7788899999999999999964
No 69
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=37.57 E-value=10 Score=34.27 Aligned_cols=50 Identities=12% Similarity=0.051 Sum_probs=40.3
Q ss_pred hhhhhhhhhhhhccccCC-CCC--------ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-PFP--------VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~~--------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.++..++ |.+ ....+|| ++|..+..+|.++.+.+.+|..
T Consensus 31 ~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D 92 (343)
T 2rbc_A 31 HVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDD 92 (343)
T ss_dssp EEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESS
T ss_pred eEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCC
Confidence 578899999999988774 432 2456788 7888999999999999999963
No 70
>2chu_A CEUE, enterochelin uptake periplasmic binding protein; iron, mecam, SELF assembly, siderophore; HET: ECA; 2.40A {Campylobacter jejuni} SCOP: c.92.2.4
Probab=37.39 E-value=1.9e+02 Score=24.77 Aligned_cols=43 Identities=12% Similarity=0.028 Sum_probs=30.2
Q ss_pred CCCCcchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccc
Q 023877 92 DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKR 142 (276)
Q Consensus 92 ~~p~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~r 142 (276)
+....+..|-|..++||.|+.... ..+.++.+++.|.++.++.
T Consensus 81 G~~~~~n~E~i~~l~PDLIi~~~~--------~~~~~~~L~~~~p~v~~~~ 123 (296)
T 2chu_A 81 GGVQQVDFEAINALKPDLIIISGR--------QSKFYDKLKEIAPTLFVGL 123 (296)
T ss_dssp BCSSSBCHHHHHHTCCSEEEECTT--------TGGGHHHHHTTSCEEECCC
T ss_pred CCCCCCCHHHHHhCCCCEEEEcCc--------cHHHHHHHHhhCCEEEEec
Confidence 333456778899999999986531 1356888998897776653
No 71
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=37.24 E-value=13 Score=32.79 Aligned_cols=54 Identities=7% Similarity=-0.045 Sum_probs=41.6
Q ss_pred hhhhhhhhhhhhccccCC-CC-------Cccccchh---hHHhhhhhcCcceeEEEEeeCCccchh
Q 023877 209 KVFALLCHSIKAFCTFPF-PF-------PVFVFLDA---SWRAFDLSYGIQTRLLLVLKNGRLMSF 263 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~~-------~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~~~~~ 263 (276)
++.++|+..+|.+...++ |. .....+|| ++|..+..+|.++.+.+.+|.. .-++
T Consensus 22 ~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~ 86 (306)
T 3bf5_A 22 FLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THRE 86 (306)
T ss_dssp EEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHH
T ss_pred cEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHH
Confidence 677899999999987653 31 13457888 7888999999999999999965 4443
No 72
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii}
Probab=36.44 E-value=17 Score=35.14 Aligned_cols=22 Identities=45% Similarity=0.943 Sum_probs=17.2
Q ss_pred CCCeEEEEcc--cccCCChHHHHH
Q 023877 18 DRPVRVYADG--IYDLFHFGHARS 39 (276)
Q Consensus 18 ~r~~~V~~~G--~FD~fH~GHl~~ 39 (276)
++.+..|+.| .+|.+|+||++-
T Consensus 23 ~~~v~~YvcGPtvy~~~HIGHaR~ 46 (462)
T 3tqo_A 23 SGKVKLYVCGMTVYDYMHIGHGRS 46 (462)
T ss_dssp TTEEEEEECCCBTTSCCBHHHHHH
T ss_pred CCeEEEEeCCCcCCCCCchhhhHH
Confidence 3456678877 799999999863
No 73
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=35.92 E-value=12 Score=32.95 Aligned_cols=50 Identities=8% Similarity=-0.138 Sum_probs=37.2
Q ss_pred hhhhhhhhhhhhccccCC----CCCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF----PFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~----~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+...+- .......+|| ++|..+..+|+++.+.+.+|..
T Consensus 3 ~v~viG~~~iD~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D 59 (313)
T 3ewm_A 3 LIASIGELLIDLISVEEGDLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGND 59 (313)
T ss_dssp EEEEESCCEEEEEESSSSCTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESS
T ss_pred cEEEECceeeeeecCCCCCcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCC
Confidence 356778888887755331 1233578898 7788899999999999999964
No 74
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=33.71 E-value=21 Score=34.23 Aligned_cols=21 Identities=48% Similarity=0.767 Sum_probs=16.8
Q ss_pred CCCeEEEEcccc--cCCChHHHH
Q 023877 18 DRPVRVYADGIY--DLFHFGHAR 38 (276)
Q Consensus 18 ~r~~~V~~~G~F--D~fH~GHl~ 38 (276)
++.+.+|+.|-- +++|+||++
T Consensus 20 ~~~v~~yv~gPt~y~~~HiGHar 42 (461)
T 1li5_A 20 AGEVGMYVCGITVYDLCHIGHGR 42 (461)
T ss_dssp TTEEEEEECCCBSSSCCBHHHHH
T ss_pred CCCeeEEEcCCcCCCCCcccccH
Confidence 445678888855 999999997
No 75
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=32.56 E-value=15 Score=32.61 Aligned_cols=51 Identities=14% Similarity=-0.043 Sum_probs=37.1
Q ss_pred hhhhhhhhhhhhccccC----CCCCccccchh---hHHhhhhhcCcceeEEEEeeCCc
Q 023877 209 KVFALLCHSIKAFCTFP----FPFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNGR 259 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~----~~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~ 259 (276)
++.++|+..+|-+..-+ +.......+|| ++|..+..+|.++.+.+.+|...
T Consensus 4 ~v~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~ 61 (346)
T 3ktn_A 4 KIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANR 61 (346)
T ss_dssp EEEEECCCEEEEECSTTCCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSH
T ss_pred cEEEeChhhhhhcCCCCCcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCH
Confidence 46678888888653211 12334678999 77888999999999999999643
No 76
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=31.53 E-value=14 Score=33.08 Aligned_cols=48 Identities=10% Similarity=-0.019 Sum_probs=38.6
Q ss_pred hhhhhhhhhhhhccccCCCCCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPFPFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.+... +......+|| ++|..+..+|+++.+.+.+|..
T Consensus 26 ~ilviG~~~~D~~~~~--~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D 76 (339)
T 1tyy_A 26 KVWVIGDASVDLVPEK--QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDD 76 (339)
T ss_dssp CEEEESCCEEEEEECS--SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred CEEEECcceeEEeccC--CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCC
Confidence 5888999999988763 2233567888 6888999999999999999964
No 77
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=30.77 E-value=17 Score=31.97 Aligned_cols=46 Identities=11% Similarity=-0.024 Sum_probs=37.0
Q ss_pred hhhhhhhhhhhhccccCCC-CCccccchh---hHHhhhhhcCc-ceeEEEEeeC
Q 023877 209 KVFALLCHSIKAFCTFPFP-FPVFVFLDA---SWRAFDLSYGI-QTRLLLVLKN 257 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~-~~~~~f~gg---~~~~~~~~~g~-~~~~~~~~~~ 257 (276)
++.++|+..+|.+.. | ......+|| ++|..+..+|. ++.+.+.+|.
T Consensus 4 ~ilviG~~~iD~~~~---~~~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~ 54 (313)
T 3kd6_A 4 SLLVIGSLAFDDIET---PFGRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGS 54 (313)
T ss_dssp CEEEESCCEEEEEEC---SSCEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEET
T ss_pred cEEEEeEEEEeeecC---CCCcccccCCCHHHHHHHHHHHhCCCceEEEEecCC
Confidence 477889999998853 3 233678999 67788999999 9999999995
No 78
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=30.34 E-value=14 Score=32.80 Aligned_cols=50 Identities=12% Similarity=-0.041 Sum_probs=39.9
Q ss_pred hhhhhhhhhhhhccccCC-C----CCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF-P----FPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~-~----~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+...+. | ......+|| ++|..+..+|.++.+.+.+|..
T Consensus 23 ~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D 80 (327)
T 3hj6_A 23 DVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGAD 80 (327)
T ss_dssp CEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESS
T ss_pred CEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCC
Confidence 678899999998877653 3 233567898 7777899999999999999964
No 79
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=29.20 E-value=14 Score=32.21 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=36.5
Q ss_pred hhhhhhhhhhhhccccCC----CCCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPF----PFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~----~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+..-+- .......+|| ++|..+..+|.++.+.+.+|..
T Consensus 3 ~v~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D 59 (311)
T 2dcn_A 3 KLITLGEILIEFNALSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDD 59 (311)
T ss_dssp EEEEESCCEEEEEESSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESS
T ss_pred CEEEECCceEEEecCCCCcccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCC
Confidence 356778888887763221 1223567888 6888999999999999999954
No 80
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=28.81 E-value=1.5e+02 Score=25.92 Aligned_cols=44 Identities=9% Similarity=0.084 Sum_probs=20.7
Q ss_pred eEEEccccCCCChHHHHHHHHHhhHHHHHHHhhcCCCcccccch
Q 023877 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVS 179 (276)
Q Consensus 136 ~~~~~~rt~giSTT~Ii~rI~~~y~~y~~Rnl~rg~~~~~l~~~ 179 (276)
.++++.-..+....+|++.+.+......++...+|.....++|.
T Consensus 81 ~~i~iSA~~~~gi~~L~~~i~~~l~~~~~~~~~~~~~~~~~~v~ 124 (282)
T 1puj_A 81 RSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRAL 124 (282)
T ss_dssp CEEECCTTTCTTGGGHHHHHHHHHHHHHHHHHHTTCCCCCEEEE
T ss_pred cEEEEECCCcccHHHHHHHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 45554434455555666555444433333333455444444433
No 81
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=28.74 E-value=26 Score=32.86 Aligned_cols=21 Identities=38% Similarity=0.602 Sum_probs=16.8
Q ss_pred CCCeEEEEcccc--cCCChHHHH
Q 023877 18 DRPVRVYADGIY--DLFHFGHAR 38 (276)
Q Consensus 18 ~r~~~V~~~G~F--D~fH~GHl~ 38 (276)
++.+.+|+.|-+ +++|+||++
T Consensus 37 ~~~v~~y~~gPt~yg~~HiGHar 59 (414)
T 3c8z_A 37 GPTATMYVCGITPYDATHLGHAA 59 (414)
T ss_dssp CSEEEEEECCCCTTSCCBHHHHH
T ss_pred CCCceEEeCCCcCCCCcCccccH
Confidence 445678888866 999999997
No 82
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.15 E-value=17 Score=31.44 Aligned_cols=43 Identities=9% Similarity=0.115 Sum_probs=35.0
Q ss_pred hhhhhhhhhhhhccccCCCCCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPFPFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.+ |. ...+|| ++|..+..+|.++.+.+.+|..
T Consensus 5 ~v~viG~~~~D~~-----p~--~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D 50 (296)
T 2qhp_A 5 IIVGMGEALWDVL-----PE--GKKIGGAPANFAYHVSQFGFDSRVVSAVGND 50 (296)
T ss_dssp EEEEESCCEEEEE-----TT--EEEEECHHHHHHHHHHHTTCEEEEEEEEESS
T ss_pred eEEEEchhheEec-----CC--CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCC
Confidence 4677899999987 32 467888 6888899999999999999964
No 83
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=27.63 E-value=18 Score=31.59 Aligned_cols=50 Identities=8% Similarity=-0.050 Sum_probs=36.0
Q ss_pred hhhhhhhhhhhhccccCCC----CCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPFP----FPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~----~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|.+..-+-| ......+|| ++|..+..+|.++.+.+.+|..
T Consensus 3 ~i~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D 59 (309)
T 1v1a_A 3 EVVTAGEPLVALVPQEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGED 59 (309)
T ss_dssp SEEEESCCEEEEECSSSSCGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSS
T ss_pred cEEEEccceEEEecCCCCcccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 3567788888877432211 123557888 6888999999999999999964
No 84
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=26.08 E-value=23 Score=31.21 Aligned_cols=52 Identities=10% Similarity=0.066 Sum_probs=37.9
Q ss_pred hhhhhhhhhhhhccc--------c-CCC-CCccccchh---hHHhhhhhcCcceeEEEEeeCCcc
Q 023877 209 KVFALLCHSIKAFCT--------F-PFP-FPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNGRL 260 (276)
Q Consensus 209 ~~~~~~~~~id~~~~--------~-~~~-~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~~ 260 (276)
++.++|+..+|-... . +.| ......+|| ++|..+..+|.++.+.+.+|....
T Consensus 7 ~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~ 71 (325)
T 3h49_A 7 DVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAA 71 (325)
T ss_dssp EEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHH
T ss_pred eEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChH
Confidence 577888888886422 1 234 234678898 678889999999999999996533
No 85
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=25.95 E-value=21 Score=31.21 Aligned_cols=50 Identities=16% Similarity=0.030 Sum_probs=36.3
Q ss_pred hhhhhhhhhhhhccccC----CCCCccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFP----FPFPVFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~----~~~~~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+..-+ +.......+|| ++|..+..+|.++.+.+.+|..
T Consensus 3 ~v~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D 59 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGND 59 (313)
T ss_dssp CEEEECCCEEEEEESSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESS
T ss_pred eEEEECcceEEEecCCCCcccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCC
Confidence 35677888888775322 11223567888 6888999999999999999964
No 86
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=25.59 E-value=22 Score=31.58 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=36.2
Q ss_pred hhhhhhhhhhhhccccCCCCC-c---cccchh---hHHhhhhhcCcceeEEEEeeCCc
Q 023877 209 KVFALLCHSIKAFCTFPFPFP-V---FVFLDA---SWRAFDLSYGIQTRLLLVLKNGR 259 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~~~-~---~~f~gg---~~~~~~~~~g~~~~~~~~~~~~~ 259 (276)
+|-++||..+|-.-.-..|.. . +..+|| ++|..+..+|.++.|.+.+|...
T Consensus 26 kv~~~GE~m~~l~p~~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~ 83 (351)
T 4gm6_A 26 QVVTIGELLMRLSTQQGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANP 83 (351)
T ss_dssp EEEEECCCEEEEECCTTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSH
T ss_pred CEEEEcceeEEecCCCCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCH
Confidence 588899999873222112211 1 456888 68889999999999999999644
No 87
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A
Probab=24.96 E-value=36 Score=33.03 Aligned_cols=26 Identities=15% Similarity=0.176 Sum_probs=14.4
Q ss_pred CCCCCCCeEEEEcc-cc--cCCChHHHHH
Q 023877 14 TAPSDRPVRVYADG-IY--DLFHFGHARS 39 (276)
Q Consensus 14 ~~~~~r~~~V~~~G-~F--D~fH~GHl~~ 39 (276)
|+...+++..++.+ -+ +++|+||++-
T Consensus 12 ~~~~~~~~~~v~~~~py~ng~lHiGH~r~ 40 (560)
T 3h99_A 12 SMTQVAKKILVTCASPYANGSIHLGHMLE 40 (560)
T ss_dssp -----CCEEEEEECCCBTTSCCBHHHHHH
T ss_pred CCCCCCCcEEEeCCCCCCCCCcchhhHHH
Confidence 33344445555555 55 7999999963
No 88
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=24.92 E-value=14 Score=32.68 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=37.4
Q ss_pred hhhhhhhhhhhhccccCCC---CC---ccccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPFP---FP---VFVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~---~~---~~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+...+-+ .+ ...++|| ++|..+..+|.++.+.+.+|..
T Consensus 5 ~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D 63 (330)
T 3iq0_A 5 KVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGND 63 (330)
T ss_dssp EEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESS
T ss_pred CEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCC
Confidence 5778899999988653211 11 1346798 6788899999999999999964
No 89
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=24.77 E-value=18 Score=32.13 Aligned_cols=49 Identities=2% Similarity=-0.084 Sum_probs=38.0
Q ss_pred hhhhhhhhhhhhccccCCCCCccccchh---hHHhhhhhc--CcceeEEEEeeCC
Q 023877 209 KVFALLCHSIKAFCTFPFPFPVFVFLDA---SWRAFDLSY--GIQTRLLLVLKNG 258 (276)
Q Consensus 209 ~~~~~~~~~id~~~~~~~~~~~~~f~gg---~~~~~~~~~--g~~~~~~~~~~~~ 258 (276)
++.++|+..+|-+.. +-|......+|| ++|..+..+ |+++.+++.+|..
T Consensus 25 ~i~viG~~~iD~~~~-~~~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D 78 (328)
T 4e69_A 25 HILSIGECMAELAPA-DLPGTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDD 78 (328)
T ss_dssp EEEEESCCEEEEEEC-SSTTEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSS
T ss_pred cEEEecCcEEEEecC-CCCCceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCC
Confidence 578899999998875 222333667888 778888889 8999999999964
No 90
>3g9q_A Ferrichrome-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.60A {Bacillus subtilis subsp} PDB: 3hxp_A
Probab=24.32 E-value=3.2e+02 Score=22.96 Aligned_cols=40 Identities=8% Similarity=-0.151 Sum_probs=27.7
Q ss_pred CcchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccc
Q 023877 95 WVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKR 142 (276)
Q Consensus 95 ~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~r 142 (276)
..+..|-|...+||.|+... . ..+.++.+++.+.++.++.
T Consensus 60 ~~~n~E~i~~l~PDlIi~~~---~-----~~~~~~~L~~~~pvv~~~~ 99 (279)
T 3g9q_A 60 DGTSVEKVIDLNPDLIIVWT---T-----QGADIKKLEKIAPTVAVKY 99 (279)
T ss_dssp CSCCHHHHHTTCCSEEEEEC---C-------CCHHHHHHHSCEEEECT
T ss_pred CCCCHHHHhcCCCCEEEEcC---C-----CHHHHHHHHhhCCEEEEcC
Confidence 34467899999999998763 1 1234777888787777653
No 91
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=24.27 E-value=26 Score=31.10 Aligned_cols=48 Identities=4% Similarity=-0.200 Sum_probs=37.3
Q ss_pred hhhhhhhhhhhccccCCCCC-----------ccccchh---hHHhhhhhcCcceeEEEEeeC
Q 023877 210 VFALLCHSIKAFCTFPFPFP-----------VFVFLDA---SWRAFDLSYGIQTRLLLVLKN 257 (276)
Q Consensus 210 ~~~~~~~~id~~~~~~~~~~-----------~~~f~gg---~~~~~~~~~g~~~~~~~~~~~ 257 (276)
+.++|...+|-++.++.|.+ ....+|| ++|..+..+|.++.+++.+|.
T Consensus 15 ~~v~G~~~vD~~~~~~~~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~ 76 (331)
T 2ajr_A 15 LTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGG 76 (331)
T ss_dssp EEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEH
T ss_pred EEEecchHHeEEEEcCCccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecC
Confidence 34778888898888876532 2445788 788899999999999999884
No 92
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=24.11 E-value=1.7e+02 Score=26.74 Aligned_cols=157 Identities=18% Similarity=0.170 Sum_probs=78.4
Q ss_pred ChHHHHHHHHHhhhC--CCCeEEEEEcCChhhhccCCCCCCCHHHHHHH---HHhcCC-cceEee-CCCCc-chHHHHhh
Q 023877 33 HFGHARSLEQAKKSF--PNTYLLVGCCNDETTHKFKGKTVMTEDERYES---LRHCKW-VDEVIP-DAPWV-VTQEFLDK 104 (276)
Q Consensus 33 H~GHl~~L~qAk~l~--~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~---l~~~r~-VD~Vi~-~~p~~-~t~e~L~~ 104 (276)
+..--..+++|+++. +.|.|=||..|-.--...++.++-.++|-..+ |+.++. .|-.+. +.... ....-|+
T Consensus 45 ~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~- 123 (314)
T 3tr9_A 45 HLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVN- 123 (314)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHH-
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHH-
Confidence 445567788888752 47888888765320000001133334553333 333332 243332 33322 2223333
Q ss_pred cCCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEcc-c----cC-CCChHHHHHHHHHhhHHHHHHHhhcCCCcccc-
Q 023877 105 HQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETK-R----TD-GISTSDIIMRIVKDYNQYVMRNLDRGYSRKDL- 176 (276)
Q Consensus 105 ~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~-r----t~-giSTT~Ii~rI~~~y~~y~~Rnl~rg~~~~~l- 176 (276)
.+.|+|= +- .-. ..++..+.++++| .++... + +. .-..-+++..+.+-..+-+++-.+.|+.+.++
T Consensus 124 aGa~iIN-DV-sg~----~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Ii 197 (314)
T 3tr9_A 124 TGADMIN-DQ-RAL----QLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRII 197 (314)
T ss_dssp HTCCEEE-ET-TTT----CSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred cCCCEEE-EC-CCC----CchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEE
Confidence 4777652 11 110 1235677788886 444432 1 11 01111777777777777788888899997654
Q ss_pred ---cch---hhhh--hHHHHHHHHHHHH
Q 023877 177 ---GVS---YVKE--KRLRVNMKLKKLQ 196 (276)
Q Consensus 177 ---~~~---~~~~--~~~~~~~~~~~~~ 196 (276)
++| |-|. ..+.+-+.+++|+
T Consensus 198 lDPG~G~~~F~Kt~~~n~~lL~~l~~l~ 225 (314)
T 3tr9_A 198 IDPGFGQGNYGKNVSENFYLLNKLPEFV 225 (314)
T ss_dssp EECCCCSGGGCCCHHHHHHHHHTTHHHH
T ss_pred EeCCCCchhhcCCHHHHHHHHHHHHHHh
Confidence 567 6553 2344444444443
No 93
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=23.98 E-value=22 Score=31.55 Aligned_cols=28 Identities=11% Similarity=-0.149 Sum_probs=24.0
Q ss_pred cccchh---hHHhhhhhcCcceeEEEEeeCC
Q 023877 231 FVFLDA---SWRAFDLSYGIQTRLLLVLKNG 258 (276)
Q Consensus 231 ~~f~gg---~~~~~~~~~g~~~~~~~~~~~~ 258 (276)
...+|| ++|..+..+|+++.+.+.+|.+
T Consensus 43 ~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~ 73 (326)
T 3b1n_A 43 RREFGGCAGNIAYALNLLGGDARMMGTLGAV 73 (326)
T ss_dssp CCEEECHHHHHHHHHHHTTCCEEEEEEEETT
T ss_pred eeccCCHHHHHHHHHHHcCCCeeEEEEECCc
Confidence 456788 7888999999999999999974
No 94
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=21.41 E-value=33 Score=30.16 Aligned_cols=46 Identities=13% Similarity=-0.133 Sum_probs=34.5
Q ss_pred hhhhhhhhhhccccCCCC--------Cccccchh---hHHhhhhhcCcceeEEEEee
Q 023877 211 FALLCHSIKAFCTFPFPF--------PVFVFLDA---SWRAFDLSYGIQTRLLLVLK 256 (276)
Q Consensus 211 ~~~~~~~id~~~~~~~~~--------~~~~f~gg---~~~~~~~~~g~~~~~~~~~~ 256 (276)
.++|.-.+|-+...+.|. .....+|| ++|..+..+|.++.+++.+|
T Consensus 6 ~v~g~~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG 62 (323)
T 2f02_A 6 TVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLG 62 (323)
T ss_dssp EEESSCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred EEecCceeEEEEecCCcccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 455666777777766553 23556888 68889999999999999988
No 95
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=21.21 E-value=1.4e+02 Score=22.41 Aligned_cols=49 Identities=18% Similarity=0.386 Sum_probs=31.7
Q ss_pred hHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEccccCCCChHHHHHHHH
Q 023877 98 TQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKRTDGISTSDIIMRIV 156 (276)
Q Consensus 98 t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~rt~giSTT~Ii~rI~ 156 (276)
..++|...++|+|+.+. .+...++.+++.| +++... .+.+..+.+++..
T Consensus 59 ~~~~l~~~gv~~vi~~~--------iG~~a~~~L~~~GI~v~~~~--~g~~i~eal~~~~ 108 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTGY--------VGPKAFQALQAAGIKVGQDL--EGLTVRQAVQRFL 108 (120)
T ss_dssp HHHHHHHHTEEEEECSC--------CCHHHHHHHHHTTCEEECCC--TTSBHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEECC--------CCHhHHHHHHHCCCEEEEcC--CCCcHHHHHHHHH
Confidence 45778778999999886 3456688888888 444422 3335555555543
No 96
>3tef_A VCTP, iron(III) ABC transporter, periplasmic iron-compo binding protein; siderophore-binding protein, transport protein; 1.70A {Vibrio cholerae}
Probab=20.86 E-value=3.6e+02 Score=22.36 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=26.4
Q ss_pred CCCCcchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEc
Q 023877 92 DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140 (276)
Q Consensus 92 ~~p~~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~ 140 (276)
+..+.+..|-|..++||.|+.+. + ..+.++.+++.+....+
T Consensus 65 g~~~~~n~E~I~al~PDLIi~~~--~------~~~~~~~l~~~~~~~~~ 105 (292)
T 3tef_A 65 GSLFEPDFETIYTQKPDLIVIGP--R------ASKSYDELSKIAPTIVF 105 (292)
T ss_dssp BCSSSBCHHHHHHTCCSEEEECG--G------GGGGHHHHHHHSCEEEC
T ss_pred CCCCCCCHHHHhcCCCCEEEecc--c------hhhHHHHHHHhcCceee
Confidence 34455677889999999998653 1 12346667776644443
No 97
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=20.69 E-value=4.1e+02 Score=22.95 Aligned_cols=43 Identities=9% Similarity=0.060 Sum_probs=29.7
Q ss_pred cchHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcCeEEEccc
Q 023877 96 VVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKR 142 (276)
Q Consensus 96 ~~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G~~~~~~r 142 (276)
.+..|-|..++||.|+.... ..+ ...+.++.+++.|.++.++.
T Consensus 105 ~~n~E~I~~l~PDLIi~~~~-~~~---~~~~~~~~L~~~gpvv~~~~ 147 (326)
T 3tlk_A 105 EPSAEAVAAQMPDLILISAT-GGD---SALALYDQLSTIAPTLIINY 147 (326)
T ss_dssp SCCHHHHHTTCCSEEEEESS-STT---CCGGGHHHHHTTSCEEEECC
T ss_pred CCCHHHHhhCCCCEEEEeCC-Ccc---chHHHHHHHHhhCCEEEEcC
Confidence 34578899999999987541 111 12456888999997777653
No 98
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=20.48 E-value=2.6e+02 Score=20.97 Aligned_cols=49 Identities=18% Similarity=0.337 Sum_probs=32.9
Q ss_pred chHHHHhhcCCCEEEeCCCcccccCCCCchHHHHHHhcC-eEEEccccCCCChHHHHHHHH
Q 023877 97 VTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG-KFKETKRTDGISTSDIIMRIV 156 (276)
Q Consensus 97 ~t~e~L~~~~~D~vv~G~d~y~~~~~~~~d~y~~lk~~G-~~~~~~rt~giSTT~Ii~rI~ 156 (276)
..+++|...++|+|+.+. .+...++.|++.| +++.. ..-+..+.+++..
T Consensus 56 ~~~~~l~~~gv~~vi~~~--------iG~~a~~~L~~~GI~v~~~---~~~~i~eal~~~~ 105 (124)
T 1eo1_A 56 RTAQIIANNGVKAVIASS--------PGPNAFEVLNELGIKIYRA---TGTSVEENLKLFT 105 (124)
T ss_dssp THHHHHHHTTCCEEEECC--------SSHHHHHHHHHHTCEEEEC---CSCCHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECC--------cCHHHHHHHHHCCCEEEEc---CCCCHHHHHHHHH
Confidence 467888889999999986 3446688888888 55553 2234455555443
No 99
>2k6o_A Cathelicidin antimicrobial peptide; human HOST defense peptide, human cathelicidin, LL-37, bacterial membrane targeting, antibiotic; NMR {Homo sapiens} PDB: 2lmf_A
Probab=20.33 E-value=1e+02 Score=19.69 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 023877 195 LQEKVKQQQERVGEKVFALLCHSIKAFC 222 (276)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~id~~~ 222 (276)
|.+-+.+.-||+++.+..+|..|=|-|-
T Consensus 2 Lg~~lrk~geKig~~~kkIgQkIKdFf~ 29 (37)
T 2k6o_A 2 LGDFFRKSKEKIGKEFKRIVQRIKDFLR 29 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677777788888887777443
No 100
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=20.03 E-value=78 Score=31.01 Aligned_cols=87 Identities=9% Similarity=-0.064 Sum_probs=50.2
Q ss_pred EEEEcccccCCChHHHHHHHHHh-hhCCCCeEEEEEcCChhhhccCCCCCCCHHHHHHHHHhcC--C-cceEee---CCC
Q 023877 22 RVYADGIYDLFHFGHARSLEQAK-KSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCK--W-VDEVIP---DAP 94 (276)
Q Consensus 22 ~V~~~G~FD~fH~GHl~~L~qAk-~l~~~d~LIVGV~sD~~~~~~Kgrpi~s~eER~e~l~~~r--~-VD~Vi~---~~p 94 (276)
.|+..=+-+|+|.+|..++++|. +.+ +-|+|- +.+-..| .-=++.+-|++..+++- + -+.|+. +.+
T Consensus 165 ~v~afqtrnp~Hrah~~~~~~~~~~~~--~~lll~----pl~g~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~ 237 (552)
T 3cr8_A 165 RIIAWQARQPMHRAQYEFCLKSAIENE--ANLLLH----PQVGGDI-TEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAP 237 (552)
T ss_dssp SEEEECCSSCCCHHHHHHHHHHHHHTT--CEEEEC----CBCCCCT-TTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSC
T ss_pred ceEEEecCCCCchHHHHHHHHHHHhcC--CeEEEE----eccCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEeecchh
Confidence 35555899999999999999998 553 533331 1111112 13688999999888752 2 134432 222
Q ss_pred C---cchHH----HH-hhcCCCEEEeCCC
Q 023877 95 W---VVTQE----FL-DKHQIDFVAHDSL 115 (276)
Q Consensus 95 ~---~~t~e----~L-~~~~~D~vv~G~d 115 (276)
. +.... .+ +.+++..++.|-|
T Consensus 238 m~~agprea~~ha~~r~n~G~th~ivGrd 266 (552)
T 3cr8_A 238 PPEASGRALLLRAIVARNFGCSLLIAGGE 266 (552)
T ss_dssp CCCSCSHHHHHHHHHHHHHTCSEEEC---
T ss_pred hcccCcHHHHHHHHHHHhCCCCeeeeCCC
Confidence 1 12222 23 3358999888864
Done!