Query 023878
Match_columns 276
No_of_seqs 190 out of 1349
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 07:18:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023878.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023878hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK04201 zinc transporter ZupT 100.0 3E-46 6.5E-51 331.2 30.6 255 3-266 2-264 (265)
2 COG0428 Predicted divalent hea 100.0 1.8E-39 3.9E-44 286.8 27.3 251 1-266 3-264 (266)
3 PF02535 Zip: ZIP Zinc transpo 100.0 1.5E-38 3.3E-43 288.4 24.8 251 10-262 6-316 (317)
4 PLN02159 Fe(2+) transport prot 100.0 1.8E-33 3.9E-38 255.4 26.6 250 10-263 49-334 (337)
5 TIGR00820 zip ZIP zinc/iron tr 100.0 7.2E-34 1.6E-38 258.2 21.2 252 9-263 20-321 (324)
6 KOG1558 Fe2+/Zn2+ regulated tr 100.0 1.5E-32 3.2E-37 247.4 24.5 253 9-264 20-325 (327)
7 KOG2694 Putative zinc transpor 99.9 1.2E-25 2.6E-30 191.2 16.7 233 33-265 102-359 (361)
8 KOG2693 Putative zinc transpor 99.9 2.2E-24 4.7E-29 201.4 6.6 256 6-262 134-449 (453)
9 KOG2474 Zinc transporter and r 99.7 9.1E-18 2E-22 151.1 1.6 265 2-271 42-405 (406)
10 KOG3907 ZIP-like zinc transpor 99.5 7E-18 1.5E-22 142.6 -12.5 211 32-260 29-295 (303)
11 PRK04201 zinc transporter ZupT 98.9 1.2E-08 2.6E-13 90.7 11.6 88 181-274 3-98 (265)
12 COG0428 Predicted divalent hea 98.3 4.3E-06 9.4E-11 74.3 9.5 84 4-87 178-264 (266)
13 PF02535 Zip: ZIP Zinc transpo 98.3 5.8E-06 1.3E-10 74.9 9.8 80 4-83 228-316 (317)
14 PLN02159 Fe(2+) transport prot 97.4 0.0011 2.4E-08 60.9 10.2 82 5-86 241-336 (337)
15 TIGR00820 zip ZIP zinc/iron tr 97.4 0.0015 3.3E-08 59.7 10.2 82 5-86 228-323 (324)
16 KOG1558 Fe2+/Zn2+ regulated tr 97.0 0.0059 1.3E-07 55.8 10.1 83 4-86 232-326 (327)
17 KOG2693 Putative zinc transpor 96.1 0.0028 6.1E-08 60.2 1.8 82 4-85 361-451 (453)
18 PRK11469 hypothetical protein; 84.5 12 0.00026 31.5 9.7 75 155-231 8-88 (188)
19 KOG2474 Zinc transporter and r 82.5 0.42 9E-06 44.3 0.1 81 5-85 317-402 (406)
20 TIGR02840 spore_YtaF putative 75.1 42 0.00091 28.6 10.2 74 156-232 6-83 (206)
21 KOG2694 Putative zinc transpor 75.0 6.6 0.00014 34.7 5.1 80 5-84 271-357 (361)
22 PF02659 DUF204: Domain of unk 74.5 23 0.0005 24.1 7.0 26 179-204 16-41 (67)
23 PRK10599 calcium/sodium:proton 72.4 85 0.0018 29.4 21.9 51 156-207 261-314 (366)
24 COG1971 Predicted membrane pro 66.4 80 0.0017 26.7 11.3 52 182-233 33-90 (190)
25 PF14143 YrhC: YrhC-like prote 61.4 16 0.00035 25.7 3.9 20 220-241 16-35 (72)
26 PF11190 DUF2976: Protein of u 46.0 1.2E+02 0.0025 22.3 6.8 55 215-270 27-85 (87)
27 PRK00733 hppA membrane-bound p 43.6 3.1E+02 0.0066 27.9 10.9 21 69-89 308-328 (666)
28 COG5336 Uncharacterized protei 39.4 1.2E+02 0.0027 23.2 5.8 36 195-230 55-93 (116)
29 PF04306 DUF456: Protein of un 37.5 2.1E+02 0.0045 22.7 13.4 85 125-229 10-95 (140)
30 COG2814 AraJ Arabinose efflux 36.0 3.8E+02 0.0083 25.3 10.8 70 168-242 60-136 (394)
31 PRK00733 hppA membrane-bound p 34.9 3.5E+02 0.0076 27.5 9.8 91 185-275 235-331 (666)
32 COG0387 ChaA Ca2+/H+ antiporte 34.6 3.9E+02 0.0085 25.0 21.8 53 155-207 259-314 (368)
33 COG3601 Predicted membrane pro 33.9 2.8E+02 0.0062 23.2 9.2 23 246-268 104-126 (186)
34 PF03030 H_PPase: Inorganic H+ 33.8 5.3E+02 0.012 26.3 12.5 29 247-275 328-356 (682)
35 COG5336 Uncharacterized protei 31.6 1.9E+02 0.0042 22.1 5.8 42 37-79 46-87 (116)
36 TIGR02230 ATPase_gene1 F0F1-AT 30.1 2E+02 0.0043 21.6 5.7 34 194-227 54-90 (100)
37 PF02673 BacA: Bacitracin resi 30.0 3.9E+02 0.0085 23.6 19.2 80 176-257 173-258 (259)
38 TIGR01104 V_PPase vacuolar-typ 29.7 6.2E+02 0.014 25.9 11.0 13 133-145 381-393 (697)
39 PF11833 DUF3353: Protein of u 28.0 3.1E+02 0.0068 23.1 7.3 43 18-60 122-167 (194)
40 PF07444 Ycf66_N: Ycf66 protei 26.1 2.5E+02 0.0054 20.4 5.4 43 213-257 8-50 (84)
41 PF06946 Phage_holin_5: Phage 25.3 2.9E+02 0.0062 20.5 7.2 54 32-89 31-84 (93)
42 KOG1397 Ca2+/H+ antiporter VCX 24.4 6.2E+02 0.013 24.1 12.2 56 8-63 160-216 (441)
43 COG4858 Uncharacterized membra 24.1 4.5E+02 0.0097 22.3 10.5 20 214-233 127-146 (226)
44 COG1968 BacA Undecaprenyl pyro 23.3 5.4E+02 0.012 23.0 19.2 81 178-260 180-265 (270)
45 PF04210 MtrG: Tetrahydrometha 22.4 1.3E+02 0.0029 21.0 3.2 20 216-235 47-66 (70)
46 PF06570 DUF1129: Protein of u 22.1 4.8E+02 0.01 21.9 10.0 9 251-259 183-191 (206)
47 PF13782 SpoVAB: Stage V sporu 22.0 3.7E+02 0.008 20.6 10.4 62 174-236 9-73 (110)
48 PRK01026 tetrahydromethanopter 21.3 1.4E+02 0.003 21.3 3.3 22 216-237 50-71 (77)
49 TIGR03055 photo_alph_chp2 puta 20.7 5.7E+02 0.012 22.5 7.6 51 180-232 23-73 (245)
50 PF04018 DUF368: Domain of unk 20.3 6.1E+02 0.013 22.4 9.9 84 4-90 141-239 (257)
No 1
>PRK04201 zinc transporter ZupT; Provisional
Probab=100.00 E-value=3e-46 Score=331.19 Aligned_cols=255 Identities=38% Similarity=0.652 Sum_probs=215.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHhhHHHHhh--------hhhHHHHHHHH
Q 023878 3 SQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINS--------IGFLKGNLWFF 74 (276)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~lG~~~~~~~~~~~~~~l~~~~afaaGvml~~~~~~llPea~~~--------~~~~~~~~~~~ 74 (276)
++.++++.+++++++++.+|++++++.+++++|+++++++||+|+|+++++.|++||++|. .+++....+++
T Consensus 2 ~~~~~a~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~~ 81 (265)
T PRK04201 2 SNVSVALLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAFF 81 (265)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Confidence 5778899999999999999999999888899999999999999999999999999999984 23456678899
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCccccccccCCCCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHhhhccchhhHH
Q 023878 75 SGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGL 154 (276)
Q Consensus 75 ~G~~l~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~iHs~~eGlalG~~~~~~~~~g~ 154 (276)
+|+++++.+|++.++.|.++.++. ++.++++ +.+++..+.++++.+|+++||+|||+++|+++..+.+.++
T Consensus 82 ~G~ll~~~ld~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~~~~a~~lH~~~eGlalg~~~~~~~~~g~ 152 (265)
T PRK04201 82 GGILGIFLIDRLVPHENPHELMQK---EEMEFQQ------PLPKSLKRTGILTALAISIHNFPEGIATFVAALSNPELGF 152 (265)
T ss_pred HHHHHHHHHHHhccccCccccccc---ccccccc------cchHHHHHHHHHHHHHHHHHhcchhhhhhhhhhcchhhHH
Confidence 999999999999985443211110 0000000 1112234568899999999999999999999888889999
Q ss_pred HHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHh
Q 023878 155 NLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHE 234 (276)
Q Consensus 155 ~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~e 234 (276)
.+++||++||+|||++++.++++++.+|+|++.+++++++++|+|+++|+++.++..++.+.++++++++|+|+|++++|
T Consensus 153 ~~~~aI~~H~iPeg~a~~~~l~~~~~s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~e 232 (265)
T PRK04201 153 PIALAIAIHNIPEGIAVAVPVYYATGSKKKAFLYSFLSGLAEPLGAVLGYLLLGPFISPVVMGAIFAAVAGIMVFISLDE 232 (265)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998876434577889999999999999999999
Q ss_pred hhhhhhhccChhHHHHHHHHHHHHHHHHHHHH
Q 023878 235 MLPLAFDYAGQKQAVKAVFVGMAFMSASLYFL 266 (276)
Q Consensus 235 llp~~~~~~~~~~~~~~~~~G~~lm~~~l~~~ 266 (276)
++||++++++++.+++++++|+.+|++.+..+
T Consensus 233 l~pea~~~~~~~~~~~~~~~G~~~m~~~~~~~ 264 (265)
T PRK04201 233 LLPAAKEYGPHHLPSYGLIAGMAVMALSLVLL 264 (265)
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999997777778889999999998766543
No 2
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=286.84 Aligned_cols=251 Identities=41% Similarity=0.618 Sum_probs=214.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh--------hHHHHH
Q 023878 1 MVSQVLVALGLSLVGGLSTSIGALFVVL-NEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG--------FLKGNL 71 (276)
Q Consensus 1 m~~~~~~~l~~~~~~~~~~~lG~~~~~~-~~~~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~--------~~~~~~ 71 (276)
|+++....+..+++++++|.+|+.+.++ .++.++++.....+|++|+|++.++.+++|++.+..+ +.....
T Consensus 3 ~~~~~l~~~~~~ll~~~~t~lG~~~~~~~~~~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T COG0428 3 MSNSLLFALLLGLLAGLATALGALLVVLAVRKVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLPALA 82 (266)
T ss_pred cchhHHHHHHHHHHHHHHHHHhHHHHHHhhcccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccccchhhHHHHH
Confidence 4567788899999999999999999988 4688999999999999999999999999999998754 346678
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCccccccccCCCCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHhhhccchh
Q 023878 72 WFFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLR 151 (276)
Q Consensus 72 ~~~~G~~l~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~iHs~~eGlalG~~~~~~~~ 151 (276)
+++.|+.+.+.+|++++|.|..++. +++ ++.+++.++.++++++++++||+|||+++|+++..++.
T Consensus 83 g~~~G~~~~~~~d~l~~h~h~~~~~----------~~~----~~~~~~~~~~~~l~~lai~iHnfpEGlai~va~~~~~~ 148 (266)
T COG0428 83 GFLLGVLFIFLLDRLVPHEHEGKSV----------EGL----EGLRKPNLRRGFLLALAISLHNFPEGLAIGVAFLSNPS 148 (266)
T ss_pred HHHHHHHHHHHHHHcCCccCCCCCc----------ccc----ccccCcchhHHHHHHHHHHHhccchhHHHHHHHhccch
Confidence 8999999999999999966543211 000 01111113468899999999999999999999999989
Q ss_pred hHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHH
Q 023878 152 VGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLT 231 (276)
Q Consensus 152 ~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~ 231 (276)
.|+.+++||.+||+|||++++.++.+++.+|+|++.++.++++.+|+|+++|+++.. ..++.+.+++++++||.|+|++
T Consensus 149 ~gi~~alaI~ihnipEG~av~~pL~~~~~s~~~~l~~~~lsg~~~~lgavig~~~~~-~~~~~~l~~~la~aaG~mv~v~ 227 (266)
T COG0428 149 LGIALALAIAIHNIPEGLAVALPLAGAGRSRLKALLVAVLSGLAEPLGAVIGAYLLG-ISSPLVLPFALAFAAGAMVYVV 227 (266)
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHhcCCchHHHHHHHHHHHhHHHHHHHHHHHHHh-hchHHHHHHHHHHHhhcchhhh
Confidence 999999999999999999999999999999999999999999999999999998873 3335899999999999999999
Q ss_pred HHhhhhhhhhc--cChhHHHHHHHHHHHHHHHHHHHH
Q 023878 232 LHEMLPLAFDY--AGQKQAVKAVFVGMAFMSASLYFL 266 (276)
Q Consensus 232 ~~ellp~~~~~--~~~~~~~~~~~~G~~lm~~~l~~~ 266 (276)
++|++||++++ .+++..+.++.+|+.+|++..+.+
T Consensus 228 ~~eliPea~~~~~~~~~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 228 VDELLPEAKRHGGGSEKLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HHHHhhHHHhcCCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999995 355667789999999996655443
No 3
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.5e-38 Score=288.41 Aligned_cols=251 Identities=25% Similarity=0.348 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-----CCChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh-----------hHHHHHHH
Q 023878 10 GLSLVGGLSTSIGALFVVLNE-----APNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLWF 73 (276)
Q Consensus 10 ~~~~~~~~~~~lG~~~~~~~~-----~~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~-----------~~~~~~~~ 73 (276)
...+...+.+.+|++++++.+ +.+++.+.++++|++|+|++++++||+||++|..+ +......+
T Consensus 6 ~~~~~i~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~ 85 (317)
T PF02535_consen 6 VAILAIFIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIF 85 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHH
Confidence 445556677778887777653 45688999999999999999999999999998752 14567788
Q ss_pred HHHHHHHHHHHHhcCCC------CCCCCCcc------c------ccc-----c--c--CCCC------Cchh---hhhhh
Q 023878 74 FSGVIFFAIVANFIPEP------SLAQGSDL------T------SKK-----K--N--KDEG------GKDI---MKKHR 117 (276)
Q Consensus 74 ~~G~~l~~~le~~~~~~------~~~~~~~~------~------~~~-----~--~--~~~~------~~~~---~~~~~ 117 (276)
++|+++++++|+++++. +.+.+.+. + ++. + + .+++ +.+. .++.+
T Consensus 86 ~~Gfl~~~~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (317)
T PF02535_consen 86 LVGFLLFFFIERILHSIFEHDHSHSHDHSHSHSSSELNSDEPSNSVSSSEIEDDSNSEHSDQNSHHSHSSHSHSHHDDKS 165 (317)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccCccccccccCCcccccccccccccccccccccccccc
Confidence 89999999999988421 11100000 0 000 0 0 0000 0000 00000
Q ss_pred -hHHHHHHHHHHHHHHhhhhhHHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhH
Q 023878 118 -RQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAE 196 (276)
Q Consensus 118 -~~~~~~~~~~~~al~iHs~~eGlalG~~~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~ 196 (276)
.+..+.++++.+|+++||++||+++|+++..+. +|.++++|++||+||+++++.++++++.++++++.+.+++++++
T Consensus 166 ~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~--~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~~~~~~~~~~~~sl~~ 243 (317)
T PF02535_consen 166 GVSQNIRALILLIALSIHSFFEGLAIGAAFSSDS--GWSLFIAIILHKIPEGFALGSILVKAGFSKRKALLLLLLFSLST 243 (317)
T ss_pred hhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhh--HHHHHHHHHHhHhHHHhhhhhhhhhhccccchhhHHHHHHHHHH
Confidence 111134889999999999999999999875543 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---hcCCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCh----hHHHHHHHHHHHHHHHH
Q 023878 197 PLGVIIVAYL---FPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQ----KQAVKAVFVGMAFMSAS 262 (276)
Q Consensus 197 plG~~~g~~~---~~~~~~~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~----~~~~~~~~~G~~lm~~~ 262 (276)
|+|+++|+++ ..+..++.+.++++++++|+|+|+++.|++||++++.+. ..+++++++|+++|+++
T Consensus 244 piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~~~~~~~~~~~~~~G~~~~~~l 316 (317)
T PF02535_consen 244 PIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHSRKSRLLKFLGFLIGFLLMALL 316 (317)
T ss_pred HHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 123457788999999999999999999999999998763 34567899999999754
No 4
>PLN02159 Fe(2+) transport protein
Probab=100.00 E-value=1.8e-33 Score=255.40 Aligned_cols=250 Identities=16% Similarity=0.185 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-----CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh-----------hHHHHHHH
Q 023878 10 GLSLVGGLSTSIGALFVVLNEA-----PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLWF 73 (276)
Q Consensus 10 ~~~~~~~~~~~lG~~~~~~~~~-----~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~-----------~~~~~~~~ 73 (276)
...++....+.+|++++++.|+ .+++.+.++.+|++|+++++++.|++||+.|..+ ++.....+
T Consensus 49 ~al~vil~~sllg~~lP~~~~~~~~~~~~~~~~~~~~~FagGV~Lat~flHLLp~a~e~l~~~cl~~~~~~~yP~~~~i~ 128 (337)
T PLN02159 49 IAIVAILTTSMIGVTAPLFSRYVSFLRPDGNIFTIVKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAGFVA 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCCchhHHHHHHHHhhhHhHHHHHHHhhhHHHHhhhchhhcCCCcccCchHHHHH
Confidence 3445566778888887776643 3467789999999999999999999999998653 23456667
Q ss_pred HHHHHHHHHHHHhcCC---CCCC-CCC-cccccc-ccCCCCCchh--hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHhh
Q 023878 74 FSGVIFFAIVANFIPE---PSLA-QGS-DLTSKK-KNKDEGGKDI--MKKHRRQVLFSGIITAVGISLHNFPEGMAVFLG 145 (276)
Q Consensus 74 ~~G~~l~~~le~~~~~---~~~~-~~~-~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~al~iHs~~eGlalG~~ 145 (276)
++|+++++++|++..+ .+.. +.. +.++++ ++...+..+. .+..|++ ..++++.+|+++||++||+++|++
T Consensus 129 ~~g~~l~~liE~~~~~~~~~~~~~~~~~~h~h~~~~~~~~~~~~~~~~~~~r~~--~~a~~l~~gl~lHS~~eGlalG~~ 206 (337)
T PLN02159 129 MLSGLVTLAIDSMATSLYTSKNSVGPMPDHGHSHGHGVVLKTKDDGNAQLLRYR--VIAMVLELGIIVHSVVIGLSLGAT 206 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCcccccCcccccccccccccccchhHHHHH--HHHHHHHHHHHHHHHHhchhhhcC
Confidence 7899999999987542 1100 000 000000 0000000000 0111222 246889999999999999999998
Q ss_pred hccchhhHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCC--Cc---hhHHHHHH
Q 023878 146 SMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSS--LS---PEILEGLL 220 (276)
Q Consensus 146 ~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~--~~---~~~~~~~l 220 (276)
+..+.. ..+.+||.+||+|||++++.++.+++.++++.+.+.+++++++|+|+++|+.+.+.+ .+ ..+.++++
T Consensus 207 ~~~~~~--~~l~~AI~~Hk~~eg~aLg~~L~~~~~~~~~~~~~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~ 284 (337)
T PLN02159 207 NDTCTI--KGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLN 284 (337)
T ss_pred CCchhH--HHHHHHHHHHhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHH
Confidence 654433 357779999999999999999999999999999999999999999999998775321 11 25789999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccC----hh---HHHHHHHHHHHHHHHHH
Q 023878 221 GSVGGVMAFLTLHEMLPLAFDYAG----QK---QAVKAVFVGMAFMSASL 263 (276)
Q Consensus 221 ~~aaG~~lyv~~~ellp~~~~~~~----~~---~~~~~~~~G~~lm~~~l 263 (276)
++++|+|+|+++.|++|+++..++ .+ ...+++++|+++|+++.
T Consensus 285 a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Mall~ 334 (337)
T PLN02159 285 ACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMSIVA 334 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998765432 11 22457999999997653
No 5
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=100.00 E-value=7.2e-34 Score=258.23 Aligned_cols=252 Identities=19% Similarity=0.230 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-----CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh-----------hHHHHHH
Q 023878 9 LGLSLVGGLSTSIGALFVVLNEA-----PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLW 72 (276)
Q Consensus 9 l~~~~~~~~~~~lG~~~~~~~~~-----~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~-----------~~~~~~~ 72 (276)
+...++..+.+.+|++++++.|+ .+++.+.++.+|++||+|++++.||+||++|..+ ++....-
T Consensus 20 i~~lfvil~~slig~~lP~i~~~~~~~~~~~~~~~~~k~FagGVfLATafvHLLp~a~e~l~~~cl~~~~~~~yP~~~~i 99 (324)
T TIGR00820 20 IVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFPFAGFI 99 (324)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhhccccCCCcchhHHHHHhccceeeeeeeeeeccHHHHhhcCcccCCCCCCcCCHHHHH
Confidence 34455566778888887765543 3346788999999999999999999999998652 3445566
Q ss_pred HHHHHHHHHHHHHhcC----CCCCCC---CCcc-----cccccc--CC---C--CCch---hhhhhhhHHHHHHHHHHHH
Q 023878 73 FFSGVIFFAIVANFIP----EPSLAQ---GSDL-----TSKKKN--KD---E--GGKD---IMKKHRRQVLFSGIITAVG 130 (276)
Q Consensus 73 ~~~G~~l~~~le~~~~----~~~~~~---~~~~-----~~~~~~--~~---~--~~~~---~~~~~~~~~~~~~~~~~~a 130 (276)
+++|+++++++|++.. +++.++ +++. +.++.+ ++ + ++.+ ...+..|+ ....+++.+|
T Consensus 100 ~~~g~~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g 178 (324)
T TIGR00820 100 AMISAILTLLVDLFATSYYERKHGKGDHGSKEIKVGDGEEGTAGGTKHGHEYYEDHVHTNSEVVQLLRQ-RVVAQVLELG 178 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCcccccccccccCCCCCCCCCccccccccccccchhhHHHH-HHHHHHHHHH
Confidence 7889999999997643 211110 0000 000000 00 0 0000 00111111 1247889999
Q ss_pred HHhhhhhHHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCC
Q 023878 131 ISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSS 210 (276)
Q Consensus 131 l~iHs~~eGlalG~~~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~ 210 (276)
+++||++||+++|++.. ....+.+++||++||+|||++++.++.+++.++++.+.+++++++++|+|+++|+++.+..
T Consensus 179 l~~Hs~~eGlalG~~~~--~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~~~~~~ 256 (324)
T TIGR00820 179 IIVHSVVIGLSLGASQS--PDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGISSSY 256 (324)
T ss_pred HHhcchhhhhhhhhccC--cchHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHHHHHHHhccc
Confidence 99999999999999853 3457899999999999999999999999999999999999999999999999998775321
Q ss_pred --Cch---hHHHHHHHHHHHHHHHHHHHhhhhhhhhccC----hh---HHHHHHHHHHHHHHHHH
Q 023878 211 --LSP---EILEGLLGSVGGVMAFLTLHEMLPLAFDYAG----QK---QAVKAVFVGMAFMSASL 263 (276)
Q Consensus 211 --~~~---~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~----~~---~~~~~~~~G~~lm~~~l 263 (276)
.++ .+.+++++++||+|+|+++.|++|++..+++ .+ .+.+++++|+++|+++.
T Consensus 257 ~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma~l~ 321 (324)
T TIGR00820 257 DDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMSLLA 321 (324)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 122 4789999999999999999999998765432 12 23467999999998764
No 6
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-32 Score=247.35 Aligned_cols=253 Identities=19% Similarity=0.270 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-----CCChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh-----------hHHHHHH
Q 023878 9 LGLSLVGGLSTSIGALFVVLNE-----APNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----------FLKGNLW 72 (276)
Q Consensus 9 l~~~~~~~~~~~lG~~~~~~~~-----~~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~-----------~~~~~~~ 72 (276)
+...++..+.+.+|++++++.+ +++++.+.+..+|++||+|+++|.|++||+.|..+ +++...-
T Consensus 20 i~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~~~~~~~~fp~~~~i 99 (327)
T KOG1558|consen 20 IVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCLADNPWGKFPFAEFI 99 (327)
T ss_pred HHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhcccccCCCCcCCChHHHH
Confidence 4455556778888888887765 35577889999999999999999999999998752 3455666
Q ss_pred HHHHHHHHHHHHHhcC----CCCCCCCC-c---ccccc--------------ccCCCCCchh-----hhhhhhHHHHHHH
Q 023878 73 FFSGVIFFAIVANFIP----EPSLAQGS-D---LTSKK--------------KNKDEGGKDI-----MKKHRRQVLFSGI 125 (276)
Q Consensus 73 ~~~G~~l~~~le~~~~----~~~~~~~~-~---~~~~~--------------~~~~~~~~~~-----~~~~~~~~~~~~~ 125 (276)
.+.|+++.+++|.+.+ |.|.++.+ + .++++ +++.+.+.+. .++.+. ....++
T Consensus 100 ~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 178 (327)
T KOG1558|consen 100 AMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGEHGAIHVGHSHGHSEPSTPGVVDDGQA-SRLRSL 178 (327)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccCCccccCCCCCCCCCCCCccccchhhh-hhHHHH
Confidence 7899999999998764 32221100 0 00000 0000000000 001111 123577
Q ss_pred HHHHHHHhhhhhHHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHH
Q 023878 126 ITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAY 205 (276)
Q Consensus 126 ~~~~al~iHs~~eGlalG~~~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~ 205 (276)
.+.+|+++||++||+++|++. +....|.+..|+.+||..||++++.++.+++.+++..+..++++++.+|+|..+|..
T Consensus 179 iL~lgi~~HSvfeGlalGv~~--~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~~ 256 (327)
T KOG1558|consen 179 ILELGLSFHSVFEGLALGVQD--SVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGIG 256 (327)
T ss_pred HHHHHHHHHHHHHhhhccccC--CHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHHH
Confidence 899999999999999999963 567889999999999999999999999999999999999999999999999999988
Q ss_pred HhcC----CCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCh------hHHHHHHHHHHHHHHHHHH
Q 023878 206 LFPS----SLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQ------KQAVKAVFVGMAFMSASLY 264 (276)
Q Consensus 206 ~~~~----~~~~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~------~~~~~~~~~G~~lm~~~l~ 264 (276)
+... ..++.+.++++++|+|+++|+++.|++|+++.+.+. ..++++.++|+++|.++..
T Consensus 257 i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i~~~~G~alms~l~~ 325 (327)
T KOG1558|consen 257 ISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLIALLLGFALMSLLAI 325 (327)
T ss_pred hcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7642 124568999999999999999999999998887552 2346789999999987643
No 7
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=1.2e-25 Score=191.19 Aligned_cols=233 Identities=20% Similarity=0.249 Sum_probs=175.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh--------hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccccc---
Q 023878 33 NLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG--------FLKGNLWFFSGVIFFAIVANFIPEPSLAQGSDLTSK--- 101 (276)
Q Consensus 33 ~~~~l~~~~afaaGvml~~~~~~llPea~~~~~--------~~~~~~~~~~G~~l~~~le~~~~~~~~~~~~~~~~~--- 101 (276)
.+|.+..+++||.|-+++.+|+|++||++|..+ ....+++++.|++.+..+|++....+...+.+..+.
T Consensus 102 g~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl~siGLwVlaGiLtF~~ieK~f~ss~EE~~~q~p~~~~~ 181 (361)
T KOG2694|consen 102 GQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQDPSSENSLSSIGLWVLAGILTFSLIEKLFASSEEEQHKQSPSAHFL 181 (361)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCCCCCCCchhhhhHHHHHHHHHHHHHHHHHhcchhhccccCCCcchh
Confidence 467889999999999999999999999998752 123688999999999999998843221111100000
Q ss_pred cc----cCCCC---Cchh--hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHhH
Q 023878 102 KK----NKDEG---GKDI--MKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVA 172 (276)
Q Consensus 102 ~~----~~~~~---~~~~--~~~~~~~~~~~~~~~~~al~iHs~~eGlalG~~~~~~~~~g~~l~~aI~lH~ipeg~a~~ 172 (276)
+. +++.+ +.++ +.+..++.+..+|+..+|-.++||..|++++.+|..+.+.|+..+++|.+||+|++.+++
T Consensus 182 ~ac~~~~g~~c~~r~~~q~~~~~~~q~~kvagYLNLlAN~iDNFtHGLAVa~SFLVS~k~GiltT~aILLHEIPHEvgDF 261 (361)
T KOG2694|consen 182 NACGGACGKVCFLREQEQKSKERKEQPKKVAGYLNLLANIIDNFTHGLAVASSFLVSTKFGILTTIAILLHEIPHEVGDF 261 (361)
T ss_pred hHhhhccccceecchhhcccccccccchhHHHHHHHHHHhhhhhhhhhHHhhhhhhhhhhhHHHHHHHHHhhccchhhhh
Confidence 00 00000 0000 011111223469999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCC--CchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccChhH---
Q 023878 173 LPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSS--LSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQ--- 247 (276)
Q Consensus 173 ~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~--~~~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~~~--- 247 (276)
..++|+|++||.+....+.++....+|+.+..--.... ..+.-..+++.|.+|.|+|++..|++|+-.++.+++.
T Consensus 262 AILLRagF~rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslk 341 (361)
T KOG2694|consen 262 AILLRAGFGRWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLK 341 (361)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHH
Confidence 99999999999999999888888888888744222111 1234567899999999999999999999888776553
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 023878 248 AVKAVFVGMAFMSASLYF 265 (276)
Q Consensus 248 ~~~~~~~G~~lm~~~l~~ 265 (276)
+.+.++.|+++|.++..+
T Consensus 342 QLl~lv~Gi~~M~~~sl~ 359 (361)
T KOG2694|consen 342 QLLMLVTGILTMSFLSLS 359 (361)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 457889999999776443
No 8
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=2.2e-24 Score=201.41 Aligned_cols=256 Identities=20% Similarity=0.222 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhh------HHHHHHHHH--
Q 023878 6 LVALGLSLVGGLSTSIGALFVVLNEA--PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGF------LKGNLWFFS-- 75 (276)
Q Consensus 6 ~~~l~~~~~~~~~~~lG~~~~~~~~~--~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~~------~~~~~~~~~-- 75 (276)
.+++...++.+++..+|.++....++ ..+..+.+..++|.|.+++.+++|++||++...+. .....-+..
T Consensus 134 ~~g~~a~~lisl~~~l~l~lvP~~~~~~~~~~~l~~l~a~a~gtL~gDa~lhLiP~~l~~~~~~~~~~s~~~~~~~~~g~ 213 (453)
T KOG2693|consen 134 LYGILATLLISLAPLLGLLLVPLRKNSKKKLELLIFLLALAVGTLLGDALLHLIPEALGFHSHLSNGVSHVTSLAMTGGK 213 (453)
T ss_pred EechHHHHHHHHHHhhheeeccccccchhHHHHHHHHHHHHHhhhhHHHHhhhCchhcccccCccCCcccccchhhcccc
Confidence 35677788888888888866555432 34678899999999999999999999999973210 000001111
Q ss_pred -----------------HHHHHHHHHHhcCCC--------CCCCCCcc-----cc----ccccCC-----CCCchhh---
Q 023878 76 -----------------GVIFFAIVANFIPEP--------SLAQGSDL-----TS----KKKNKD-----EGGKDIM--- 113 (276)
Q Consensus 76 -----------------G~~l~~~le~~~~~~--------~~~~~~~~-----~~----~~~~~~-----~~~~~~~--- 113 (276)
+...+...++..... |.+.+.+. +. ++++.+ +.+....
T Consensus 214 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~~~gh~h~~~~~~~~~~e~~~~~~~~~~~d~~~~~~~~~~~~~~ 293 (453)
T KOG2693|consen 214 YHFFSNESNLSIFLAVLGVSLLFVTEKNMRALKGGGKHHGHSHGHSNTYNPGSEKITLNVKDGVGDSVSLSSSSFEHKLE 293 (453)
T ss_pred eeeecccccceeeeeeechHHhhccccchhhccCCCCCCCccCCcCCCcCcccccccccccccCCCccccCCcchhcccc
Confidence 112222222222110 01100000 00 000000 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHhhhccchhhHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHH
Q 023878 114 KKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSG 193 (276)
Q Consensus 114 ~~~~~~~~~~~~~~~~al~iHs~~eGlalG~~~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~ 193 (276)
+...+.....+|++++|+++|||.||+|+|++|..+...|+++++|+.+||+|+++++.+.|+++|.+.+|++.++++++
T Consensus 294 ~~~~~~l~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG~s~kqAl~lnllsa 373 (453)
T KOG2693|consen 294 EFEVEELKKVAYMILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSGLSVKQALLLNLLSA 373 (453)
T ss_pred cccccchhhHhHHHHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcCCcHHHHHHHHHHhH
Confidence 00022334579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccChh----H----HHHHHHHHHHHHHHH
Q 023878 194 FAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQK----Q----AVKAVFVGMAFMSAS 262 (276)
Q Consensus 194 l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~~----~----~~~~~~~G~~lm~~~ 262 (276)
+.+.+|..+|.++. +.-++.+..++++++||.|+|++..+++||..+..+.+ . +..+++.|+.+|+++
T Consensus 374 l~a~~G~~ig~~~~-~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~i 449 (453)
T KOG2693|consen 374 LTAFAGLAIGLVLG-AGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLI 449 (453)
T ss_pred HHHHhhhheeEEec-CCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhh
Confidence 99999999987663 22257788899999999999999999999998876532 1 235788888888543
No 9
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=99.67 E-value=9.1e-18 Score=151.05 Aligned_cols=265 Identities=28% Similarity=0.395 Sum_probs=161.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHhhHHH---Hhhhh----hH-HHHHHH
Q 023878 2 VSQVLVALGLSLVGGLSTSIGALFVVLNEAPNLKVLGLLQGFAAGLMLSISFLDLAHNA---INSIG----FL-KGNLWF 73 (276)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~~lG~~~~~~~~~~~~~~l~~~~afaaGvml~~~~~~llPea---~~~~~----~~-~~~~~~ 73 (276)
.+++.++++.+++.+..|.+|+.+.++.+..++|++...++||+|+|++.++.-++-++ +|... +. +...-.
T Consensus 42 ~~sv~~all~tl~~~~~tslga~~vv~~~~~~~~~l~~~lGfAaGvmLaaSf~S~l~~s~h~le~a~s~g~f~~~~f~~~ 121 (406)
T KOG2474|consen 42 INSVRQALLGTLLLGGLTSLGAAYVVLVEANSRKVLDISLGFAAGVMLAASFWSLLAHSDHDLEMAESSGGFFKWAFSPV 121 (406)
T ss_pred cchHHHHHHHHHHHHHHHhcccceEEEEecCchhhhhhhhchhhhHHHHHHHHHhhccccchhhhhhccchhhhhhhhhh
Confidence 45677889999999999999999888888888899999999999999999999888777 44321 11 110001
Q ss_pred HHHHHHH------------HHHH--HhcCCCCCCCC---------Cc----------cccc-------------------
Q 023878 74 FSGVIFF------------AIVA--NFIPEPSLAQG---------SD----------LTSK------------------- 101 (276)
Q Consensus 74 ~~G~~l~------------~~le--~~~~~~~~~~~---------~~----------~~~~------------------- 101 (276)
..++.+. +..| ++.++..+... +. .+++
T Consensus 122 a~~f~i~~~~~~~~~a~kv~l~d~~~l~~~~~~~~~~~~t~~~qs~~~~~~~~~~s~~~~n~P~glav~~~~~~~~~~g~ 201 (406)
T KOG2474|consen 122 ANGFLITKDSDRGLGAKKVHLADLLRLLSSLGCADGNKCTPLLQSELPAYIACTSSISESNVPEGLAVSSLSGSSNRSGV 201 (406)
T ss_pred ccccceeecccccccceeEeeeeheeeeccccccCCcccccccccccCccchhhhhhhhcCCCccceecccccccccccc
Confidence 1222111 1112 11111000000 00 0000
Q ss_pred ----c----c------cCCCCC-------ch-hhhhhhhHHHHHHHHHHHHHHhhhhhHHH-HHHhhhcc-------chh
Q 023878 102 ----K----K------NKDEGG-------KD-IMKKHRRQVLFSGIITAVGISLHNFPEGM-AVFLGSMK-------GLR 151 (276)
Q Consensus 102 ----~----~------~~~~~~-------~~-~~~~~~~~~~~~~~~~~~al~iHs~~eGl-alG~~~~~-------~~~ 151 (276)
+ + +.++++ .. ....+.....+.--.....+..||.|||+ ++++++.. +..
T Consensus 202 ~~~~~~~~~~~~~A~hss~~~~ay~~~~P~~~~~~~~a~~sw~~i~l~~~~~~~h~~P~g~~~I~va~~~alst~pE~Fe 281 (406)
T KOG2474|consen 202 NLNEERSLLRDSSAHHSSDEGPAYGSNLPSGNDVEEAAASSWRRIHLLTLSITVHNHPEGLIGIQVALGAALSTFPEGFE 281 (406)
T ss_pred cccchhhccchhhcccCCcccccccccCCCCCccccchhhhhHHHhhhcchhhcccCcchhhHHHHHHHhhhhcCcHHHH
Confidence 0 0 000000 00 00000011112222356788899999998 77776542 011
Q ss_pred hHH--HHHHHHH---HhhhHHHHHhHHHHHhccCCHHHHHHHH-HHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHH
Q 023878 152 VGL--NLAVAIA---LHNIPEGVAVALPVYFATQSKWQAFKLA-TLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGG 225 (276)
Q Consensus 152 ~g~--~l~~aI~---lH~ipeg~a~~~~l~~~~~~~~~~~~~~-~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG 225 (276)
.-. ...++|. +||+|||++++.++..++.+|||++++. +..+...|+|.+++..+. ..-.....++++++++|
T Consensus 282 ~~~ns~~a~Gf~v~li~nf~Eglavslpl~~a~~Sr~~afl~~a~~g~~s~~lGll~a~~v~-la~~igl~~~~~a~aaG 360 (406)
T KOG2474|consen 282 SFYNSSLAIGFGVFLIHNFVEGLAVSLPLAGAGFSRLKAFLYGAVLGGVSPPLGLLIAFAVF-LAEPIGLLPYALAFAAG 360 (406)
T ss_pred HHhccccccchhHHHHhcccccceeeeehhhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHH-hcCccchhhHHHHHhcc
Confidence 111 1344444 9999999999999999999999999876 445667778988876665 22122358999999999
Q ss_pred HHHHHHHHhhhhhhhhccChhHHHHHHHHH---HHHHHHHHHHHHhhcC
Q 023878 226 VMAFLTLHEMLPLAFDYAGQKQAVKAVFVG---MAFMSASLYFLEISLP 271 (276)
Q Consensus 226 ~~lyv~~~ellp~~~~~~~~~~~~~~~~~G---~~lm~~~l~~~~~~~~ 271 (276)
.++|+...+++||+.++++.+..-....+| ++++ ..++...+
T Consensus 361 ~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~v~----l~l~~~lg 405 (406)
T KOG2474|consen 361 AMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFLVT----LILDVALG 405 (406)
T ss_pred ceEEEEeccccccccccccccccccccchhhhhHHHH----HHHHHhcc
Confidence 999999999999999887655443333344 5554 44455444
No 10
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=7e-18 Score=142.56 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=149.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh---------------------------------------hHHHHHH
Q 023878 32 PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG---------------------------------------FLKGNLW 72 (276)
Q Consensus 32 ~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~---------------------------------------~~~~~~~ 72 (276)
.+++.+....-+++|.+.+++...++||..+.+- ....+..
T Consensus 29 ~se~rl~lvtv~GAgll~gtAl~viIpegv~sly~~~~~~~~~g~~~~~~~~~~~vIp~~i~a~v~~~~~~~~~~~IG~s 108 (303)
T KOG3907|consen 29 LSEERLKLVTVLGAGLLVGTALTVIIPEGVSSLYVKIAVLSILGIGMLLGTSFMLVIPEGIKAEVEHDGHVGVHALIGFS 108 (303)
T ss_pred cchhheEEEEeecccceecceeEEEecccHHHHhhhHHHHhhhccchhcccccceeccccceeeeeecCCcChheeeeHH
Confidence 4556666777788999999999899998876530 0134556
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCccccccccCCCCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHhhhcc-chh
Q 023878 73 FFSGVIFFAIVANFIPEPSLAQGSDLTSKKKNKDEGGKDIMKKHRRQVLFSGIITAVGISLHNFPEGMAVFLGSMK-GLR 151 (276)
Q Consensus 73 ~~~G~~l~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~iHs~~eGlalG~~~~~-~~~ 151 (276)
..+|+++++++||.-. .+.++..+ . +.+|++. .-....+|+.+|..-||.|+|.+... +.+
T Consensus 109 lVLgfv~mLlVdqi~t-v~~h~~v~--------~-------~a~rs~i--n~~t~tlgLvVHaaaDGVALGaaattn~~s 170 (303)
T KOG3907|consen 109 LVLGFVFMLLVDQIGT-VYVHSNVK--------F-------QAGRSII--NHITVTLGLVVHAAADGVALGAAATTNNDS 170 (303)
T ss_pred HHHHHHHHHhhhcccc-EEEecccc--------h-------hhhhhcc--ccceeEEEEEEeeccccceecccccccCCc
Confidence 6788888888887432 11111100 0 0111111 11345789999999999999976543 345
Q ss_pred hHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCC----CchhHHHHHHHHHHHHH
Q 023878 152 VGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSS----LSPEILEGLLGSVGGVM 227 (276)
Q Consensus 152 ~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~----~~~~~~~~~l~~aaG~~ 227 (276)
.-+.+++||.+||.|..|++.+.+...+..||+...--++|++++|+|.++-+....+. .++...+.++-|+||+|
T Consensus 171 vqiIVfvAImlHKaPAafgLvSfll~e~l~r~~Irkhl~lFa~saPl~~ivt~lli~q~s~~m~~~satGvlmLfSaGtf 250 (303)
T KOG3907|consen 171 VQIIVFVAIMLHKAPAAFGLVSFLLHENLDRWEIRKHLVLFALSAPLGYIVTYLLILQHSKTMLSESATGVLMLFSAGTF 250 (303)
T ss_pred EEEeehhHHHHhcccHHHHHHHHHHHhhhHHHHHhhheEEEeccCcHHHHHHHHhhhccChhhhhhhhcceeeeecCCee
Confidence 56789999999999999999999999999999999888999999999999865544322 12334588999999999
Q ss_pred HHHHHHhhhhhhhhccCh------------hHHHHHHHHHHHHHH
Q 023878 228 AFLTLHEMLPLAFDYAGQ------------KQAVKAVFVGMAFMS 260 (276)
Q Consensus 228 lyv~~~ellp~~~~~~~~------------~~~~~~~~~G~~lm~ 260 (276)
+|+++...+||..+.++. +.-...+++|..+-.
T Consensus 251 LYvatvhvlpe~~~~dh~l~vea~~g~~l~~~E~v~li~G~~iPl 295 (303)
T KOG3907|consen 251 LYVATVHVLPELSHTDHSLSVEATGGAVLPHDELVYLIIGALIPL 295 (303)
T ss_pred EEEEEEEEccccCCCCcccccccccccccchhHHHHHHHhHHHHH
Confidence 999999999997663221 112356777877663
No 11
>PRK04201 zinc transporter ZupT; Provisional
Probab=98.92 E-value=1.2e-08 Score=90.68 Aligned_cols=88 Identities=26% Similarity=0.381 Sum_probs=68.0
Q ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc--------ChhHHHHHH
Q 023878 181 SKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLHEMLPLAFDYA--------GQKQAVKAV 252 (276)
Q Consensus 181 ~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~--------~~~~~~~~~ 252 (276)
+.++++.++++.++++++|++++.++ +..++.+.+.+++|++|+|+|+++.|++||+.+.- +......++
T Consensus 3 ~~~~a~~~~~l~~~~t~lGal~~~~~--~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~ 80 (265)
T PRK04201 3 NVSVALLLTLLAGLATGIGSLIAFFG--KKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAF 80 (265)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Confidence 34677888999999999999997665 34688899999999999999999999999999741 112233567
Q ss_pred HHHHHHHHHHHHHHHhhcCCCC
Q 023878 253 FVGMAFMSASLYFLEISLPAEM 274 (276)
Q Consensus 253 ~~G~~lm~~~l~~~~~~~~~~~ 274 (276)
++|++++ +++|+..+|+|
T Consensus 81 ~~G~ll~----~~ld~~~~~~~ 98 (265)
T PRK04201 81 FGGILGI----FLIDRLVPHEN 98 (265)
T ss_pred HHHHHHH----HHHHHhccccC
Confidence 7777777 56666666544
No 12
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=98.29 E-value=4.3e-06 Score=74.31 Aligned_cols=84 Identities=23% Similarity=0.267 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh-hHHHHHHHHHHHHHHHHHHHHhhHHHHhh--hhhHHHHHHHHHHHHHH
Q 023878 4 QVLVALGLSLVGGLSTSIGALFVVLNEAPNL-KVLGLLQGFAAGLMLSISFLDLAHNAINS--IGFLKGNLWFFSGVIFF 80 (276)
Q Consensus 4 ~~~~~l~~~~~~~~~~~lG~~~~~~~~~~~~-~~l~~~~afaaGvml~~~~~~llPea~~~--~~~~~~~~~~~~G~~l~ 80 (276)
+.++++.++.+.+++.++|++++++.-..++ ..++++++|++|.|+++++-|++||+.+. .+......+++.|+.++
T Consensus 178 s~~~~l~~~~lsg~~~~lgavig~~~~~~~~~~~l~~~la~aaG~mv~v~~~eliPea~~~~~~~~~~~~~~~~~G~~~~ 257 (266)
T COG0428 178 SRLKALLVAVLSGLAEPLGAVIGAYLLGISSPLVLPFALAFAAGAMVYVVVDELLPEAKRHGGGSEKLATAGLFAGFLVM 257 (266)
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHhhchHHHHHHHHHHHhhcchhhhHHHHhhHHHhcCCCchHHHHHHHHHHHHHH
Confidence 4568899999999999999999877655555 89999999999999999999999999994 34445678899999999
Q ss_pred HHHHHhc
Q 023878 81 AIVANFI 87 (276)
Q Consensus 81 ~~le~~~ 87 (276)
+++|..+
T Consensus 258 ~~l~~~l 264 (266)
T COG0428 258 AVLDVLL 264 (266)
T ss_pred HHHHHhh
Confidence 9998755
No 13
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=98.25 E-value=5.8e-06 Score=74.87 Aligned_cols=80 Identities=33% Similarity=0.389 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh----hHHHHHHHH
Q 023878 4 QVLVALGLSLVGGLSTSIGALFVVLN-----EAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG----FLKGNLWFF 74 (276)
Q Consensus 4 ~~~~~l~~~~~~~~~~~lG~~~~~~~-----~~~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~----~~~~~~~~~ 74 (276)
+.++++.+.++.++++++|++++.+. ...++....++++|++|.++++++.|++||..++.. .....++++
T Consensus 228 ~~~~~~~~~~~~sl~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~~~~~~~~~~~~~ 307 (317)
T PF02535_consen 228 SKRKALLLLLLFSLSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHSRKSRLLKFLGFL 307 (317)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 34567778999999999999999988 456677889999999999999999999999998765 345567888
Q ss_pred HHHHHHHHH
Q 023878 75 SGVIFFAIV 83 (276)
Q Consensus 75 ~G~~l~~~l 83 (276)
+|+.++.++
T Consensus 308 ~G~~~~~~l 316 (317)
T PF02535_consen 308 IGFLLMALL 316 (317)
T ss_pred HHHHHHHHH
Confidence 999888765
No 14
>PLN02159 Fe(2+) transport protein
Probab=97.43 E-value=0.0011 Score=60.87 Aligned_cols=82 Identities=18% Similarity=0.230 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC----Ch---hHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh-------hHHHH
Q 023878 5 VLVALGLSLVGGLSTSIGALFVVLNEAP----NL---KVLGLLQGFAAGLMLSISFLDLAHNAINSIG-------FLKGN 70 (276)
Q Consensus 5 ~~~~l~~~~~~~~~~~lG~~~~~~~~~~----~~---~~l~~~~afaaGvml~~~~~~llPea~~~~~-------~~~~~ 70 (276)
.++.+.+.++.++.+++|..++....+. ++ ....+++++|+|.|+++++.|++|+-+.... .....
T Consensus 241 ~~~~~~~~~~fal~tPiG~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~ 320 (337)
T PLN02159 241 NVKKFLMAFFFAVTTPFGIFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCF 320 (337)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 3556778889999999999998766432 11 3568999999999999999999998653221 12334
Q ss_pred HHHHHHHHHHHHHHHh
Q 023878 71 LWFFSGVIFFAIVANF 86 (276)
Q Consensus 71 ~~~~~G~~l~~~le~~ 86 (276)
+++++|+..|.++.++
T Consensus 321 ~~l~~G~~~Mall~~w 336 (337)
T PLN02159 321 FAALLGCGGMSIVAKW 336 (337)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 5678899988887654
No 15
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=97.36 E-value=0.0015 Score=59.73 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC----Ch---hHHHHHHHHHHHHHHHHHHHHhhHHHHhhh-------hhHHHH
Q 023878 5 VLVALGLSLVGGLSTSIGALFVVLNEAP----NL---KVLGLLQGFAAGLMLSISFLDLAHNAINSI-------GFLKGN 70 (276)
Q Consensus 5 ~~~~l~~~~~~~~~~~lG~~~~~~~~~~----~~---~~l~~~~afaaGvml~~~~~~llPea~~~~-------~~~~~~ 70 (276)
.++.+.+.++.++++++|..++....+. ++ ....++.++|+|+|+++++.|++|+-+... ....-.
T Consensus 228 ~~~~~~~~~~fsl~tPiG~~iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~ 307 (324)
T TIGR00820 228 CKSVTIMCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAY 307 (324)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHH
Confidence 3456778888999999999998766432 22 256899999999999999999999766322 112345
Q ss_pred HHHHHHHHHHHHHHHh
Q 023878 71 LWFFSGVIFFAIVANF 86 (276)
Q Consensus 71 ~~~~~G~~l~~~le~~ 86 (276)
+++++|+.+|.++.++
T Consensus 308 ~~~~~G~~~Ma~l~~w 323 (324)
T TIGR00820 308 IALLLGAGLMSLLAKW 323 (324)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6788899998887664
No 16
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=97.01 E-value=0.0059 Score=55.76 Aligned_cols=83 Identities=18% Similarity=0.271 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC------ChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh------hHHHHH
Q 023878 4 QVLVALGLSLVGGLSTSIGALFVVLNEAP------NLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG------FLKGNL 71 (276)
Q Consensus 4 ~~~~~l~~~~~~~~~~~lG~~~~~~~~~~------~~~~l~~~~afaaGvml~~~~~~llPea~~~~~------~~~~~~ 71 (276)
+.+.+...+++-++.|++|..++.-.++. +.....++.++|+|++++++++|++|+-+.+.. ...-.+
T Consensus 232 ~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i 311 (327)
T KOG1558|consen 232 TFKSAVLMALFFSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLI 311 (327)
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHH
Confidence 44667778888889999999888766542 334678999999999999999999998886532 123456
Q ss_pred HHHHHHHHHHHHHHh
Q 023878 72 WFFSGVIFFAIVANF 86 (276)
Q Consensus 72 ~~~~G~~l~~~le~~ 86 (276)
..++|+.++..+.++
T Consensus 312 ~~~~G~alms~l~~w 326 (327)
T KOG1558|consen 312 ALLLGFALMSLLAIW 326 (327)
T ss_pred HHHHhHHHHHHHHHh
Confidence 677898888776543
No 17
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=96.09 E-value=0.0028 Score=60.23 Aligned_cols=82 Identities=21% Similarity=0.275 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhh-----hH---HHHHHHH
Q 023878 4 QVLVALGLSLVGGLSTSIGALFVVLNEAP-NLKVLGLLQGFAAGLMLSISFLDLAHNAINSIG-----FL---KGNLWFF 74 (276)
Q Consensus 4 ~~~~~l~~~~~~~~~~~lG~~~~~~~~~~-~~~~l~~~~afaaGvml~~~~~~llPea~~~~~-----~~---~~~~~~~ 74 (276)
...+++.+.+++++...+|..++++.... .+....++.++++|.+++++..+++||-.+..+ +. .=.++.+
T Consensus 361 s~kqAl~lnllsal~a~~G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil 440 (453)
T KOG2693|consen 361 SVKQALLLNLLSALTAFAGLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGIL 440 (453)
T ss_pred cHHHHHHHHHHhHHHHHhhhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHH
Confidence 35678999999999999999999888666 577788999999999999999999999998653 21 2246778
Q ss_pred HHHHHHHHHHH
Q 023878 75 SGVIFFAIVAN 85 (276)
Q Consensus 75 ~G~~l~~~le~ 85 (276)
.|+.+++++..
T Consensus 441 ~G~~~ml~ia~ 451 (453)
T KOG2693|consen 441 AGFTIMLLIAL 451 (453)
T ss_pred hhhHHHhhhhc
Confidence 89999888754
No 18
>PRK11469 hypothetical protein; Provisional
Probab=84.46 E-value=12 Score=31.51 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=32.8
Q ss_pred HHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHH----HHHHHHhhHHHHHHHHHHHhc--CCCchhHHHHHHHHHHHHHH
Q 023878 155 NLAVAIALHNIPEGVAVALPVYFATQSKWQAFK----LATLSGFAEPLGVIIVAYLFP--SSLSPEILEGLLGSVGGVMA 228 (276)
Q Consensus 155 ~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~----~~~~~~l~~plG~~~g~~~~~--~~~~~~~~~~~l~~aaG~~l 228 (276)
.+.++..+-.+.-+++.+... .+.++++.+. .++..++++.+|...|..+.. +..++++-..++.+-++-|+
T Consensus 8 llaialsmDaF~v~ia~G~~~--~~~~~~~~~~~~l~~g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi 85 (188)
T PRK11469 8 LLAFGMSMDAFAASIGKGATL--HKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMI 85 (188)
T ss_pred HHHHHHHHHHHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555544332 2344455333 344444444555555443321 11223344444555555555
Q ss_pred HHH
Q 023878 229 FLT 231 (276)
Q Consensus 229 yv~ 231 (276)
|=+
T Consensus 86 ~e~ 88 (188)
T PRK11469 86 IEG 88 (188)
T ss_pred HHH
Confidence 533
No 19
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=82.52 E-value=0.42 Score=44.30 Aligned_cols=81 Identities=23% Similarity=0.223 Sum_probs=50.9
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhcC-CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhhHHHHHHHHH---HHHH
Q 023878 5 VLVALGL-SLVGGLSTSIGALFVVLNEA-PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFS---GVIF 79 (276)
Q Consensus 5 ~~~~l~~-~~~~~~~~~lG~~~~~~~~~-~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~~~~~~~~~~~---G~~l 79 (276)
.|+++.+ .+..+..-++|.+.++..-. -..+.+++++++++|+|+.+..-+++||+.........-.+..+ ++++
T Consensus 317 r~~afl~~a~~g~~s~~lGll~a~~v~la~~igl~~~~~a~aaG~ml~~~~~~~i~~a~~~~~~~~~s~~~i~~~~~~~v 396 (406)
T KOG2474|consen 317 RLKAFLYGAVLGGVSPPLGLLIAFAVFLAEPIGLLPYALAFAAGAMLYVVLDDIIPEAQRSDNSKLASLGTICGKWCFLV 396 (406)
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHhcCccchhhHHHHHhccceEEEEeccccccccccccccccccccchhhhhHHH
Confidence 3444444 55556677778877765422 12236899999999999999999999999865432111122222 2556
Q ss_pred HHHHHH
Q 023878 80 FAIVAN 85 (276)
Q Consensus 80 ~~~le~ 85 (276)
++.+|-
T Consensus 397 ~l~l~~ 402 (406)
T KOG2474|consen 397 TLILDV 402 (406)
T ss_pred HHHHHH
Confidence 666654
No 20
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=75.07 E-value=42 Score=28.57 Aligned_cols=74 Identities=18% Similarity=0.211 Sum_probs=38.6
Q ss_pred HHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCC----chhHHHHHHHHHHHHHHHHH
Q 023878 156 LAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSL----SPEILEGLLGSVGGVMAFLT 231 (276)
Q Consensus 156 l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~----~~~~~~~~l~~aaG~~lyv~ 231 (276)
+.+|..+-.+.-+++.+ +.+...+.+.++..+++..+++.+|..+|..+. +.. ++++-..++.+-++-|+|=+
T Consensus 6 laials~Daf~vgi~~G--~~~~~~~~~~~l~ig~~~~~~~~lg~~~G~~~~-~~i~~~~~~~ig~~iLi~iG~~mi~~~ 82 (206)
T TIGR02840 6 LAFAVSLDSFGVGIAYG--LRKIKIPFLSNLIIAVISGLFIFISMLLGKFLA-KFLPPKVTEILGAFILIAIGIWIIYNA 82 (206)
T ss_pred HHHHHHHHHHHHHHHHH--HhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444 222223455566667777777777777776554 222 33444455555555555544
Q ss_pred H
Q 023878 232 L 232 (276)
Q Consensus 232 ~ 232 (276)
+
T Consensus 83 ~ 83 (206)
T TIGR02840 83 F 83 (206)
T ss_pred H
Confidence 3
No 21
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=74.97 E-value=6.6 Score=34.67 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhhHH---HHHHHHHHH
Q 023878 5 VLVALGLSLVGGLSTSIGALFVVLNEA----PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLK---GNLWFFSGV 77 (276)
Q Consensus 5 ~~~~l~~~~~~~~~~~lG~~~~~~~~~----~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~~~~---~~~~~~~G~ 77 (276)
.|.+...-+.++..-.+|++++..... .-+...++++-|.+|-++.+++.+++||-.++-+++- -.+....|+
T Consensus 271 rw~Aa~aQL~TA~~GlLGalvAi~g~~g~~pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee~p~eslkQLl~lv~Gi 350 (361)
T KOG2694|consen 271 RWNAALAQLTTAAFGLLGALVAIHGHTGNVPAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEESPVESLKQLLMLVTGI 350 (361)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHhhcCcCCchhhhhhcceeeeeccCceeehhHHHhhhHhhhccCHHHHHHHHHHHHHHH
Confidence 455656666667777788877763321 1234567889999999999999999999987654331 234556788
Q ss_pred HHHHHHH
Q 023878 78 IFFAIVA 84 (276)
Q Consensus 78 ~l~~~le 84 (276)
+.|.++.
T Consensus 351 ~~M~~~s 357 (361)
T KOG2694|consen 351 LTMSFLS 357 (361)
T ss_pred HHHHHHH
Confidence 7776654
No 22
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=74.50 E-value=23 Score=24.11 Aligned_cols=26 Identities=12% Similarity=0.056 Sum_probs=12.3
Q ss_pred cCCHHHHHHHHHHHHhhHHHHHHHHH
Q 023878 179 TQSKWQAFKLATLSGFAEPLGVIIVA 204 (276)
Q Consensus 179 ~~~~~~~~~~~~~~~l~~plG~~~g~ 204 (276)
+.++++.+..+..+++.+.+-..+|+
T Consensus 16 ~~~~~~~~~~~~~ig~~~~~~~~~G~ 41 (67)
T PF02659_consen 16 GISRRIILLIALIIGIFQFIMPLLGL 41 (67)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555544444444444444433
No 23
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=72.45 E-value=85 Score=29.36 Aligned_cols=51 Identities=18% Similarity=0.133 Sum_probs=33.2
Q ss_pred HHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHH---HHHHhhHHHHHHHHHHHh
Q 023878 156 LAVAIALHNIPEGVAVALPVYFATQSKWQAFKLA---TLSGFAEPLGVIIVAYLF 207 (276)
Q Consensus 156 l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~---~~~~l~~plG~~~g~~~~ 207 (276)
+.++ .+=|.||+++--..-+++...+.--+... -...+..|.=.++|+++.
T Consensus 261 vIIa-iv~~apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lvlig~~~g 314 (366)
T PRK10599 261 FLVA-LLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFLTG 314 (366)
T ss_pred HHHH-HHHcchhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4445 78899999986655555555554444332 335677788888888774
No 24
>COG1971 Predicted membrane protein [Function unknown]
Probab=66.39 E-value=80 Score=26.66 Aligned_cols=52 Identities=21% Similarity=0.120 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhhHH----HHHHHHHHHhc--CCCchhHHHHHHHHHHHHHHHHHHH
Q 023878 182 KWQAFKLATLSGFAEP----LGVIIVAYLFP--SSLSPEILEGLLGSVGGVMAFLTLH 233 (276)
Q Consensus 182 ~~~~~~~~~~~~l~~p----lG~~~g~~~~~--~~~~~~~~~~~l~~aaG~~lyv~~~ 233 (276)
.++++..++.++..+. +|...|.++.. ...++++-..++.+-+--|+|-++.
T Consensus 33 ~~~~L~ia~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~e~f~ 90 (190)
T COG1971 33 FKEALVIALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMIIEGFK 90 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455555555554443 45555443320 1223445556666666666666655
No 25
>PF14143 YrhC: YrhC-like protein
Probab=61.37 E-value=16 Score=25.74 Aligned_cols=20 Identities=5% Similarity=0.200 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhh
Q 023878 220 LGSVGGVMAFLTLHEMLPLAFD 241 (276)
Q Consensus 220 l~~aaG~~lyv~~~ellp~~~~ 241 (276)
--+|-++|+|+++ ++|....
T Consensus 16 vLLAvs~FlYiG~--viP~~~~ 35 (72)
T PF14143_consen 16 VLLAVSTFLYIGT--VIPIGAK 35 (72)
T ss_pred HHHHHHHHHHHHh--hCCccch
Confidence 3456788999988 5784333
No 26
>PF11190 DUF2976: Protein of unknown function (DUF2976); InterPro: IPR021356 Members of this protein family are found occasionally on plasmids such as the Pseudomonas putida TOL plasmid pWWO_p085. Usually, however, they are found on the bacterial main chromosome in a region flanked by markers of conjugative transfer and/or transposition.
Probab=46.02 E-value=1.2e+02 Score=22.26 Aligned_cols=55 Identities=13% Similarity=0.086 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhh---hhhccChhHHH-HHHHHHHHHHHHHHHHHHhhc
Q 023878 215 ILEGLLGSVGGVMAFLTLHEMLPL---AFDYAGQKQAV-KAVFVGMAFMSASLYFLEISL 270 (276)
Q Consensus 215 ~~~~~l~~aaG~~lyv~~~ellp~---~~~~~~~~~~~-~~~~~G~~lm~~~l~~~~~~~ 270 (276)
..-.-+-+++-+|++++-. .+.. .++.+..+... ...++|+.+..+..++++...
T Consensus 27 ~~l~gLv~~a~afi~Va~~-~i~~y~eir~gK~~W~~fg~~~vVGvvLlv~viwLl~~A~ 85 (87)
T PF11190_consen 27 VLLLGLVLAAAAFIVVAKA-AISTYNEIRDGKKTWGDFGATVVVGVVLLVFVIWLLTKAA 85 (87)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcccHHHhhhHHHHHHHHHHHHHHHHHHHc
Confidence 4444556677778888765 4332 23222222222 467889998888888877543
No 27
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=43.57 E-value=3.1e+02 Score=27.86 Aligned_cols=21 Identities=10% Similarity=0.083 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 023878 69 GNLWFFSGVIFFAIVANFIPE 89 (276)
Q Consensus 69 ~~~~~~~G~~l~~~le~~~~~ 89 (276)
...|+..|+++.++-|.+..+
T Consensus 308 ~~iGlv~g~li~~iTeYyTs~ 328 (666)
T PRK00733 308 VLIGLVVGALIGLITEYYTST 328 (666)
T ss_pred HHHHHHHHHHHHHHHhhccCC
Confidence 345555565666555655543
No 28
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.36 E-value=1.2e+02 Score=23.18 Aligned_cols=36 Identities=33% Similarity=0.227 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHhc-CCCchh--HHHHHHHHHHHHHHHH
Q 023878 195 AEPLGVIIVAYLFP-SSLSPE--ILEGLLGSVGGVMAFL 230 (276)
Q Consensus 195 ~~plG~~~g~~~~~-~~~~~~--~~~~~l~~aaG~~lyv 230 (276)
.+.+|+.+||++-. -+.+|+ +...++||.||++.-+
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 45678888876631 123444 4567889999987543
No 29
>PF04306 DUF456: Protein of unknown function (DUF456); InterPro: IPR007403 This is a family of putative membrane proteins.
Probab=37.54 E-value=2.1e+02 Score=22.74 Aligned_cols=85 Identities=21% Similarity=0.174 Sum_probs=52.4
Q ss_pred HHHHHHHHhhhhhHHHH-HHhhhccchhhHHHHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHHHHHHhhHHHHHHHH
Q 023878 125 IITAVGISLHNFPEGMA-VFLGSMKGLRVGLNLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLATLSGFAEPLGVIIV 203 (276)
Q Consensus 125 ~~~~~al~iHs~~eGla-lG~~~~~~~~~g~~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~~~~~l~~plG~~~g 203 (276)
.+...+..++.+.+|.. ++..+ -....+-.++-+.-|=++-....++.|.||+... ...+|+++|
T Consensus 10 ~l~~~g~l~~~~~~g~~~~~~~~------l~~~~~l~~l~~~~d~~~~~~~ak~~G~s~~~~~--------ga~iG~IvG 75 (140)
T PF04306_consen 10 PLIWLGILLYAFFTGFSEFGWWF------LAILAVLALLGEVLDYLAGAYGAKRFGASRWGIW--------GAIIGGIVG 75 (140)
T ss_pred HHHHHHHHHHHHHcCCCcccHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH--------HHHHHHHHH
Confidence 45667888888887766 43322 1233334456667777777778888898887654 334677777
Q ss_pred HHHhcCCCchhHHHHHHHHHHHHHHH
Q 023878 204 AYLFPSSLSPEILEGLLGSVGGVMAF 229 (276)
Q Consensus 204 ~~~~~~~~~~~~~~~~l~~aaG~~ly 229 (276)
.++. + ..+.+.+.-.|+++.
T Consensus 76 ~f~~----~--p~G~iiG~~~Ga~l~ 95 (140)
T PF04306_consen 76 FFVL----P--PLGLIIGPFLGAFLG 95 (140)
T ss_pred HHHh----h--HHHHHHHHHHHHHHH
Confidence 6664 1 225555555555443
No 30
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=36.05 E-value=3.8e+02 Score=25.33 Aligned_cols=70 Identities=17% Similarity=0.133 Sum_probs=39.9
Q ss_pred HHHhHHHHH---hccCCHHHHHHHH-HHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH---hhhhhhh
Q 023878 168 GVAVALPVY---FATQSKWQAFKLA-TLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTLH---EMLPLAF 240 (276)
Q Consensus 168 g~a~~~~l~---~~~~~~~~~~~~~-~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~~---ellp~~~ 240 (276)
+.+++.++. .++.+||+.+++. .++.++..+-++.. ++.--.+-.++.|++.|.|.-++.. ++.|+.+
T Consensus 60 ~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp-----~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~ 134 (394)
T COG2814 60 GVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP-----SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK 134 (394)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 445555543 4467788777654 34444444333321 1112235578889999999766554 6777655
Q ss_pred hc
Q 023878 241 DY 242 (276)
Q Consensus 241 ~~ 242 (276)
+.
T Consensus 135 ~~ 136 (394)
T COG2814 135 RG 136 (394)
T ss_pred hh
Confidence 54
No 31
>PRK00733 hppA membrane-bound proton-translocating pyrophosphatase; Validated
Probab=34.91 E-value=3.5e+02 Score=27.45 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHhc--CCCch-h---HHHHHHHHHHHHHHHHHHHhhhhhhhhccChhHHHHHHHHHHHH
Q 023878 185 AFKLATLSGFAEPLGVIIVAYLFP--SSLSP-E---ILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMAF 258 (276)
Q Consensus 185 ~~~~~~~~~l~~plG~~~g~~~~~--~~~~~-~---~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~~~~~~~~~~G~~l 258 (276)
.+.+-++.+....+..++|.++.. ++.++ . ..-+.-++-.-...|....-++|........+..+.+.++|+..
T Consensus 235 ~v~~Pl~i~~~gii~Siig~~~v~~~~~~~~~~aL~~g~~~s~~l~~v~~~~~~~~~l~~~~~~~~~~~~f~~~~iGlv~ 314 (666)
T PRK00733 235 GVLFPLLIAAVGIIASIIGIFFVRLGKGGNPMKALNRGLIVTAVLSIVLTYFATYWLLGDGADGFTWLNLFGAVLIGLVV 314 (666)
T ss_pred HHHHHHHHHHHHHHHHHHHHeeEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHH
Confidence 344444444555566666666553 11111 1 01122222233333444444555322222233445678888888
Q ss_pred HHHHHHHHHhhcCCCCC
Q 023878 259 MSASLYFLEISLPAEMS 275 (276)
Q Consensus 259 m~~~l~~~~~~~~~~~~ 275 (276)
..++.++-+|.|.|++.
T Consensus 315 g~li~~iTeYyTs~~~~ 331 (666)
T PRK00733 315 GALIGLITEYYTSTEYR 331 (666)
T ss_pred HHHHHHHHhhccCCCCC
Confidence 88888888888887653
No 32
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=34.64 E-value=3.9e+02 Score=25.03 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=32.2
Q ss_pred HHHHHHHHhhhHHHHHhHHHHHhccCCHHHHHHHH---HHHHhhHHHHHHHHHHHh
Q 023878 155 NLAVAIALHNIPEGVAVALPVYFATQSKWQAFKLA---TLSGFAEPLGVIIVAYLF 207 (276)
Q Consensus 155 ~l~~aI~lH~ipeg~a~~~~l~~~~~~~~~~~~~~---~~~~l~~plG~~~g~~~~ 207 (276)
-+.++-..-|.||.+.--..-++.+..+..-+... -...+..|.=.++++++.
T Consensus 259 G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~lltiP~lvlis~~~g 314 (368)
T COG0387 259 GLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLTIPVLVLISLFTG 314 (368)
T ss_pred HHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34555556699999986666555555554444322 223456677777777764
No 33
>COG3601 Predicted membrane protein [Function unknown]
Probab=33.92 E-value=2.8e+02 Score=23.22 Aligned_cols=23 Identities=17% Similarity=0.365 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh
Q 023878 246 KQAVKAVFVGMAFMSASLYFLEI 268 (276)
Q Consensus 246 ~~~~~~~~~G~~lm~~~l~~~~~ 268 (276)
+..+.++++|...|.+.+.+++|
T Consensus 104 ~~~i~~~llgti~~t~~m~~LNY 126 (186)
T COG3601 104 KNLIVGLLLGTIAMTVVMSLLNY 126 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34467889999999888888885
No 34
>PF03030 H_PPase: Inorganic H+ pyrophosphatase; InterPro: IPR004131 Two types of proteins that hydrolyse inorganic pyrophosphate (PPi), very different in both amino acid sequence and structure, have been characterised to date: soluble and membrane-bound proton-pumping pyrophosphatases (sPPases and H(+)-PPases, respectively). sPPases are ubiquitous proteins that hydrolyse PPi to release heat, whereas H+-PPases, so far unidentified in animal and fungal cells, couple the energy of PPi hydrolysis to proton movement across biological membranes [, ]. The latter type is represented by this group of proteins. H+-PPases (3.6.1.1 from EC) are also called vacuolar-type inorganic pyrophosphatases (V-PPase) or pyrophosphate-energised vacuolar membrane proton pumps []. In plants, vacuoles contain two enzymes for acidifying the interior of the vacuole, the V-ATPase and the V-PPase (V is for vacuolar) []. Two distinct biochemical subclasses of H+-PPases have been characterised to date: K+-stimulated and K+-insensitive [, ]. For additional information please see [, ].; GO: 0004427 inorganic diphosphatase activity, 0009678 hydrogen-translocating pyrophosphatase activity, 0015992 proton transport, 0016020 membrane; PDB: 4A01_A.
Probab=33.77 E-value=5.3e+02 Score=26.32 Aligned_cols=29 Identities=10% Similarity=0.044 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 023878 247 QAVKAVFVGMAFMSASLYFLEISLPAEMS 275 (276)
Q Consensus 247 ~~~~~~~~G~~lm~~~l~~~~~~~~~~~~ 275 (276)
..+.+.++|.....++.++-+|.|.|+|.
T Consensus 328 ~~~~~~~iGl~~g~lI~~~TeYyTs~~~~ 356 (682)
T PF03030_consen 328 GLFGCVLIGLVAGVLIGFITEYYTSYSYR 356 (682)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-TTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34567888888888888888888887763
No 35
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.58 E-value=1.9e+02 Score=22.14 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhhhhhHHHHHHHHHHHHH
Q 023878 37 LGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIF 79 (276)
Q Consensus 37 l~~~~afaaGvml~~~~~~llPea~~~~~~~~~~~~~~~G~~l 79 (276)
..+..-|-+|+|+++.+--++-+-.... +|......++|+..
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTs-PwglIv~lllGf~A 87 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTS-PWGLIVFLLLGFGA 87 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHH
Confidence 4456668899999998777766655543 33333344455543
No 36
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=30.06 E-value=2e+02 Score=21.61 Aligned_cols=34 Identities=24% Similarity=0.199 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHhcCCCc---hhHHHHHHHHHHHHH
Q 023878 194 FAEPLGVIIVAYLFPSSLS---PEILEGLLGSVGGVM 227 (276)
Q Consensus 194 l~~plG~~~g~~~~~~~~~---~~~~~~~l~~aaG~~ 227 (276)
+++.+|+++|.++-..... -.+...++|+++|++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~ 90 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCL 90 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence 3444566666655421111 123344555555554
No 37
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=29.99 E-value=3.9e+02 Score=23.60 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=46.6
Q ss_pred HhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhc--CC--CchhHHHHHHHHHHHHH-HHHHHHhhhhhhhhccChhH-HH
Q 023878 176 YFATQSKWQAFKLATLSGFAEPLGVIIVAYLFP--SS--LSPEILEGLLGSVGGVM-AFLTLHEMLPLAFDYAGQKQ-AV 249 (276)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~--~~--~~~~~~~~~l~~aaG~~-lyv~~~ellp~~~~~~~~~~-~~ 249 (276)
+-.|.+|.++.-++++.+++..+|+.+ .-+.. +. .+......+.|+.+... -|++. +.+-+-.++.+.+. .+
T Consensus 173 l~~G~~r~~A~~fSFllsiP~ilga~~-l~~~~~~~~~~~~~~~~~~~ig~~~afv~g~l~i-~~ll~~~~~~~~~~F~~ 250 (259)
T PF02673_consen 173 LLLGLDREEAARFSFLLSIPAILGAGL-LELKDLFSAGLDSGSWPPLLIGFVVAFVVGYLAI-KWLLRFLKRRKLRPFAI 250 (259)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccccChhhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhCCceeehh
Confidence 347899999999999999999999877 22221 11 12234444554444444 34444 45555555443332 34
Q ss_pred HHHHHHHH
Q 023878 250 KAVFVGMA 257 (276)
Q Consensus 250 ~~~~~G~~ 257 (276)
+++++|..
T Consensus 251 Y~~~lg~~ 258 (259)
T PF02673_consen 251 YRIILGII 258 (259)
T ss_pred HHhhHHHh
Confidence 56666654
No 38
>TIGR01104 V_PPase vacuolar-type H(+)-translocating pyrophosphatase. This model describes proton pyrophosphatases from eukaryotes (predominantly plants), archaea and bacteria. It is an integral membrane protein and is suggested to have about 15 membrane spanning domains. Proton translocating inorganic pyrophosphatase, like H(+)-ATPase, acidifies the vacuoles and is pivotal to the vacuolar secondary active transport systems in plants.
Probab=29.68 E-value=6.2e+02 Score=25.86 Aligned_cols=13 Identities=23% Similarity=0.084 Sum_probs=7.7
Q ss_pred hhhhhHHHHHHhh
Q 023878 133 LHNFPEGMAVFLG 145 (276)
Q Consensus 133 iHs~~eGlalG~~ 145 (276)
-+|+..|+++|..
T Consensus 381 AtnII~Gla~Gm~ 393 (697)
T TIGR01104 381 ATNVIFGLALGYK 393 (697)
T ss_pred hHhHHHHHHHHHH
Confidence 3566666666664
No 39
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=28.04 E-value=3.1e+02 Score=23.12 Aligned_cols=43 Identities=21% Similarity=0.225 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhcCCChhHHH---HHHHHHHHHHHHHHHHHhhHHH
Q 023878 18 STSIGALFVVLNEAPNLKVLG---LLQGFAAGLMLSISFLDLAHNA 60 (276)
Q Consensus 18 ~~~lG~~~~~~~~~~~~~~l~---~~~afaaGvml~~~~~~llPea 60 (276)
+..+|+.+.+..||.++...+ -+.++..|.++|..+.-.+|..
T Consensus 122 al~~~~~iyfl~~K~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~~ 167 (194)
T PF11833_consen 122 ALGLGACIYFLNRKERKLGRAFLWTLGGLVVGLILGSLLASWLPVD 167 (194)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 445556666555553333333 3445667777777776666443
No 40
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=26.09 E-value=2.5e+02 Score=20.41 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhccChhHHHHHHHHHHH
Q 023878 213 PEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQKQAVKAVFVGMA 257 (276)
Q Consensus 213 ~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~~~~~~~~~~G~~ 257 (276)
..+.++.+++ +|..+|. ....-||-+++...-.+.++++.|..
T Consensus 8 ~~iLgi~l~~-~~~~Ly~-lr~~~Pev~Rd~D~~fs~vgLl~g~I 50 (84)
T PF07444_consen 8 SYILGIILIL-GGLALYF-LRFFRPEVSRDYDIFFSSVGLLYGLI 50 (84)
T ss_pred HHHHHHHHHH-HHHHHHH-HHHHCcchhhhhhHHHHHHHHHHHHH
Confidence 3456667776 4555554 34466777766543333344444443
No 41
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=25.30 E-value=2.9e+02 Score=20.51 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=32.0
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCC
Q 023878 32 PNLKVLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWFFSGVIFFAIVANFIPE 89 (276)
Q Consensus 32 ~~~~~l~~~~afaaGvml~~~~~~llPea~~~~~~~~~~~~~~~G~~l~~~le~~~~~ 89 (276)
.++|+++.+ ++..|++++.... .+|...+.. .....|.+.|+.-.-+.|.+..+
T Consensus 31 v~~K~iPlI-s~viGilLG~~~~-~~~~~~~l~--~~~~aG~laGlAaTGL~e~~t~r 84 (93)
T PF06946_consen 31 VPNKWIPLI-SVVIGILLGAAAY-PLTGDGNLA--LMAWAGGLAGLAATGLFEQFTNR 84 (93)
T ss_pred CCcchhhHH-HHHHHHHHHHHhh-hcCCCccHH--HHHHHHHHhhhhhhhHHHHHHhh
Confidence 467888874 5888999988743 333322111 12334667777666666766653
No 42
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=24.37 E-value=6.2e+02 Score=24.07 Aligned_cols=56 Identities=14% Similarity=0.052 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHhhHHHHhh
Q 023878 8 ALGLSLVGGLSTSIGALFVVL-NEAPNLKVLGLLQGFAAGLMLSISFLDLAHNAINS 63 (276)
Q Consensus 8 ~l~~~~~~~~~~~lG~~~~~~-~~~~~~~~l~~~~afaaGvml~~~~~~llPea~~~ 63 (276)
.++.++++.+-..+|..+..- .+|..+++=.-.-....+.++-....+++|-.++.
T Consensus 160 SlLGSILsnlLLvlG~s~~~Ggi~rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~ 216 (441)
T KOG1397|consen 160 SLLGSILSNLLLVLGLSLFCGGIRRKDQRFNIKSAGVNSALLLLAVLGILLPTVLHY 216 (441)
T ss_pred hhHHHHHHHHHHHhhHHHhhcccccceeecccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666555555433221 12222222111222334455556667777777654
No 43
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=24.13 E-value=4.5e+02 Score=22.32 Aligned_cols=20 Identities=25% Similarity=0.257 Sum_probs=11.5
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 023878 214 EILEGLLGSVGGVMAFLTLH 233 (276)
Q Consensus 214 ~~~~~~l~~aaG~~lyv~~~ 233 (276)
.+.-++.|+.+|.-.|+...
T Consensus 127 lItlll~a~vgGfamy~my~ 146 (226)
T COG4858 127 LITLLLTAVVGGFAMYIMYY 146 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHH
Confidence 34455666666666666543
No 44
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=23.34 E-value=5.4e+02 Score=23.00 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=44.1
Q ss_pred ccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCC----chhHHHHHHHHHHHHHHHHHHHhhhhhhhhccChh-HHHHHH
Q 023878 178 ATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSL----SPEILEGLLGSVGGVMAFLTLHEMLPLAFDYAGQK-QAVKAV 252 (276)
Q Consensus 178 ~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~----~~~~~~~~l~~aaG~~lyv~~~ellp~~~~~~~~~-~~~~~~ 252 (276)
.|.+|..+.-++++.+.++.+|+.. +-+. ++. .........|+.+...........+-+-.++++-. -.++-+
T Consensus 180 lG~~r~~AaefSFlLaIP~m~GA~~-l~l~-k~~~~~~~~~~~~l~vg~i~AFvv~~~~I~~ll~~i~~~~~~~F~~Yri 257 (270)
T COG1968 180 LGLSREAAAEFSFLLAIPAMFGASA-LDLF-KSGDALSAADLPILLVGFIVAFVVSLIAIKFLLRFIKRHSFIPFAIYRI 257 (270)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHH-HHHH-hhhcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehHHHHH
Confidence 5789999999999999999999876 3333 221 11222233444443333222223333333333322 234567
Q ss_pred HHHHHHHH
Q 023878 253 FVGMAFMS 260 (276)
Q Consensus 253 ~~G~~lm~ 260 (276)
++|..+..
T Consensus 258 vlgi~~l~ 265 (270)
T COG1968 258 VLGIVVLV 265 (270)
T ss_pred HHHHHHHH
Confidence 77776653
No 45
>PF04210 MtrG: Tetrahydromethanopterin S-methyltransferase, subunit G ; InterPro: IPR005866 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive a sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of a methyl group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.; GO: 0030269 tetrahydromethanopterin S-methyltransferase activity, 0015948 methanogenesis, 0016021 integral to membrane
Probab=22.35 E-value=1.3e+02 Score=20.95 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 023878 216 LEGLLGSVGGVMAFLTLHEM 235 (276)
Q Consensus 216 ~~~~l~~aaG~~lyv~~~el 235 (276)
.+++.|+.+|.++|+.+.-+
T Consensus 47 iGIlYG~v~Glii~~~~~~l 66 (70)
T PF04210_consen 47 IGILYGLVIGLIIFIIYIVL 66 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 57889999999988876644
No 46
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.13 E-value=4.8e+02 Score=21.91 Aligned_cols=9 Identities=11% Similarity=0.434 Sum_probs=3.7
Q ss_pred HHHHHHHHH
Q 023878 251 AVFVGMAFM 259 (276)
Q Consensus 251 ~~~~G~~lm 259 (276)
.+++|.+..
T Consensus 183 ~iiig~i~~ 191 (206)
T PF06570_consen 183 YIIIGVIAF 191 (206)
T ss_pred HHHHHHHHH
Confidence 344444433
No 47
>PF13782 SpoVAB: Stage V sporulation protein AB
Probab=22.02 E-value=3.7e+02 Score=20.59 Aligned_cols=62 Identities=19% Similarity=0.120 Sum_probs=34.3
Q ss_pred HHHhccCCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHH---HHHHHhhh
Q 023878 174 PVYFATQSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMA---FLTLHEML 236 (276)
Q Consensus 174 ~l~~~~~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~l---yv~~~ell 236 (276)
++.+...+.++..++=-...+...+|.+...+=. .-.-+.+.-...|+.+|+|+ .++..|.+
T Consensus 9 Rla~~T~t~~~i~lYE~~iilG~~~gn~~~~~~~-~~~~~~~~~~i~GL~~GiFvG~la~ALaEvl 73 (110)
T PF13782_consen 9 RLAQLTHTARHIRLYEWAIILGAILGNIFSLFEI-SIPLGPILLIIFGLFAGIFVGCLAAALAEVL 73 (110)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHcc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555554334444555655532211 11234567778899999885 55666665
No 48
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional
Probab=21.30 E-value=1.4e+02 Score=21.29 Aligned_cols=22 Identities=27% Similarity=0.347 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh
Q 023878 216 LEGLLGSVGGVMAFLTLHEMLP 237 (276)
Q Consensus 216 ~~~~l~~aaG~~lyv~~~ellp 237 (276)
.+++.|+..|.++++....+.+
T Consensus 50 iGIlYG~viGlli~~i~~~~~~ 71 (77)
T PRK01026 50 IGILYGLVIGLLIVLVYIILSP 71 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5788899999988887776654
No 49
>TIGR03055 photo_alph_chp2 putative photosynthetic complex assembly protein 2. This uncharacterized protein family was identified, by the method of partial phylogenetic profiling, as having a matching phylogenetic distribution to that of the photosynthetic reaction center of the alpha-proteobacterial type. It is nearly always encoded near other photosynthesis-related genes, including puhA.
Probab=20.72 E-value=5.7e+02 Score=22.51 Aligned_cols=51 Identities=4% Similarity=-0.101 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q 023878 180 QSKWQAFKLATLSGFAEPLGVIIVAYLFPSSLSPEILEGLLGSVGGVMAFLTL 232 (276)
Q Consensus 180 ~~~~~~~~~~~~~~l~~plG~~~g~~~~~~~~~~~~~~~~l~~aaG~~lyv~~ 232 (276)
....+...+++..+....+.++.|.... ..+..+.+.-.+|.++.++.-=.
T Consensus 23 ~~~~~~~~~s~~~~t~ll~~~l~gl~~t--~~d~sv~gaY~aF~~al~vWgW~ 73 (245)
T TIGR03055 23 SLGRSTHLRSVVAGLPLLTGGLWGLSAT--ADDVSVGGAYVAFTCAIFVWGWQ 73 (245)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHH--ccCccHHHHHHHHHHHHHHHHHH
Confidence 3333456666666666666666665543 34667889999999999987633
No 50
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=20.34 E-value=6.1e+02 Score=22.44 Aligned_cols=84 Identities=15% Similarity=0.212 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHhc-------CCChh---HHHHHHHHHHHHHHHHH-HHHhhHHHHhhhhhHH
Q 023878 4 QVLVALGLSLVGGLSTSI----GALFVVLNE-------APNLK---VLGLLQGFAAGLMLSIS-FLDLAHNAINSIGFLK 68 (276)
Q Consensus 4 ~~~~~l~~~~~~~~~~~l----G~~~~~~~~-------~~~~~---~l~~~~afaaGvml~~~-~~~llPea~~~~~~~~ 68 (276)
+.+..+..+.+++.++.+ |+.+-.... ..++. .+..+.-|+.|+.++.. +..++--.++++ ..
T Consensus 141 ~~~~lf~~G~ia~~AMIlPGiSGS~iLlilG~Y~~vl~ai~~~~~~~~~~L~~f~~G~~~Gi~~~skll~~ll~~~--~~ 218 (257)
T PF04018_consen 141 SYLYLFLAGAIAACAMILPGISGSFILLILGLYEPVLSAISDLIDSNIPVLIPFGIGVVIGILLFSKLLSYLLKRY--RS 218 (257)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 455667777888877776 333222221 23444 56777888999999884 445555555543 33
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC
Q 023878 69 GNLWFFSGVIFFAIVANFIPEP 90 (276)
Q Consensus 69 ~~~~~~~G~~l~~~le~~~~~~ 90 (276)
.+..++.|+.+..... +.|+.
T Consensus 219 ~t~~~i~GlviGSl~~-i~P~~ 239 (257)
T PF04018_consen 219 QTYAFIIGLVIGSLRA-IWPWK 239 (257)
T ss_pred HHHHHHHHHHHHHhHH-hccCC
Confidence 4566677776665543 34544
Done!