BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023880
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RWV3|CCL11_ARATH Cyclin-L1-1 OS=Arabidopsis thaliana GN=CYCL1-1 PE=2 SV=2
Length = 416
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 194/231 (83%), Positives = 215/231 (93%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQAVMATGQVLF RFYCK+S A+FDVKIVAAS VWLASKLEE+P+KARQVIIVFHRMECR
Sbjct: 52 PQAVMATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECR 111
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLEL 136
RE LP+EHLD+++KKFSELK+E+SRTERHILKEMGFVCHVEHPHKFISNYLATLETP EL
Sbjct: 112 RENLPLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPEL 171
Query: 137 RQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDE 196
RQEAWNLANDSLRTTLCVRF+SEVVACGVVYAAARRFQ+PLPENPPWWKAFDA+KS IDE
Sbjct: 172 RQEAWNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDE 231
Query: 197 VCRVLAHLYSLPKAKYIPVCKDGTSFTFSSKTVDSQPQSTPKEVLQSSPQA 247
VCRVLAHLYSLPKA+YI VCKDG FTFSS++ +SQ QS K++L + +A
Sbjct: 232 VCRVLAHLYSLPKAQYISVCKDGKPFTFSSRSGNSQGQSATKDLLPGAGEA 282
>sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp. japonica GN=CYCL1-1 PE=2 SV=1
Length = 427
Score = 362 bits (928), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 167/228 (73%), Positives = 192/228 (84%), Gaps = 1/228 (0%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQAVMAT QVLFHRFYCK+SF RF VK VAAS VWLA KLEESPR+++ +IIVFHRMECR
Sbjct: 52 PQAVMATAQVLFHRFYCKKSFVRFSVKRVAASCVWLAGKLEESPRRSKHIIIVFHRMECR 111
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLEL 136
RE +PIEHLD+FSKK+S+LK ++ RTERH+LKEMGF+CHVEHPHKFISNYLATLE P EL
Sbjct: 112 RENVPIEHLDVFSKKYSDLKHDLVRTERHLLKEMGFICHVEHPHKFISNYLATLEAP-EL 170
Query: 137 RQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDE 196
QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARR +PLPE+PPWW FDA+++GI E
Sbjct: 171 TQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHGVPLPEDPPWWNVFDADEAGIQE 230
Query: 197 VCRVLAHLYSLPKAKYIPVCKDGTSFTFSSKTVDSQPQSTPKEVLQSS 244
VCRVLAHLYSLPK++YI V KD SFT + + + +P + S
Sbjct: 231 VCRVLAHLYSLPKSQYIQVYKDNDSFTHRRTSDTNASKESPATTVASD 278
>sp|Q5BKF8|CCNL2_XENTR Cyclin-L2 OS=Xenopus tropicalis GN=ccnl2 PE=2 SV=1
Length = 497
Score = 171 bits (432), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 120/196 (61%), Gaps = 3/196 (1%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ MATGQVLF RF+ +SF + ++ VA + V LASK+EE+PR+ R VI VFHR+
Sbjct: 73 PQVAMATGQVLFQRFFYTKSFVKHSMEHVAMACVHLASKIEEAPRRIRDVINVFHRLRQL 132
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE- 135
RE L + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE
Sbjct: 133 REKQKSTPL-ILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNK 191
Query: 136 -LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGI 194
L Q +WN NDSLRT + VRF E +AC ++ AAR +IPLP P W+ F A + I
Sbjct: 192 HLVQTSWNYMNDSLRTDVFVRFNPETIACACIFLAARTLEIPLPNRPHWFYLFGASEEDI 251
Query: 195 DEVCRVLAHLYSLPKA 210
E+C + LY+ KA
Sbjct: 252 KEICLQILRLYTRKKA 267
>sp|Q7ZVX0|CCNL1_DANRE Cyclin-L1 OS=Danio rerio GN=ccnl1 PE=1 SV=1
Length = 498
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 125/213 (58%), Gaps = 14/213 (6%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESP 60
+Q AG ++ PQ MATGQV+F RF+ +SF + + +IVA + V LASK+EESP
Sbjct: 70 IQSAGILLRL------PQVAMATGQVIFQRFFFSKSFVKHNFEIVAMACVNLASKIEESP 123
Query: 61 RKARQVIIVFHRMECRR--EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEH 118
R+ R VI VFH ++ + + P+ + + + K ++ + ER ILKE+GF HV+H
Sbjct: 124 RRVRDVINVFHHLKQGKGKKSTPL----ILDQNYINTKNQVIKAERRILKELGFCVHVKH 179
Query: 119 PHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIP 176
PHK I YL LE L Q AWN ND+LRT+ VRF+ E +AC +Y AAR QIP
Sbjct: 180 PHKIIVMYLQVLECEKNQMLVQTAWNYMNDALRTSAFVRFEPETIACACIYLAARVLQIP 239
Query: 177 LPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPK 209
LP P W+ F A K I E+C LYS K
Sbjct: 240 LPSKPHWFLLFGATKEDIKEICINTMKLYSREK 272
>sp|Q5I0H5|CCNL2_RAT Cyclin-L2 OS=Rattus norvegicus GN=Ccnl2 PE=2 SV=2
Length = 520
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 9/198 (4%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+
Sbjct: 93 PQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHL 152
Query: 77 REG---LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP 133
RE +P+ + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE
Sbjct: 153 REKKKPVPL----VLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECE 208
Query: 134 LE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEK 191
L Q AWN NDSLRT + VRF+ E +AC +Y AAR +IPLP P W+ F A +
Sbjct: 209 RNQHLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATE 268
Query: 192 SGIDEVCRVLAHLYSLPK 209
I E+C + LY+ K
Sbjct: 269 EEIQEICFKILQLYTRKK 286
>sp|Q9JJA7|CCNL2_MOUSE Cyclin-L2 OS=Mus musculus GN=Ccnl2 PE=1 SV=1
Length = 518
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 9/198 (4%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+
Sbjct: 93 PQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHL 152
Query: 77 REG---LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP 133
RE +P+ + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE
Sbjct: 153 REKKKPVPL----VLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECE 208
Query: 134 LE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEK 191
L Q AWN NDSLRT + VRF+ E +AC +Y AAR +IPLP P W+ F A +
Sbjct: 209 RNQHLVQTAWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATE 268
Query: 192 SGIDEVCRVLAHLYSLPK 209
I E+C + LY+ K
Sbjct: 269 EEIQEICFKILQLYTRKK 286
>sp|Q96S94|CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1
Length = 520
Score = 167 bits (423), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 127/214 (59%), Gaps = 15/214 (7%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESP 60
+Q AG ++ PQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+P
Sbjct: 85 IQAAGILLRL------PQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAP 138
Query: 61 RKARQVIIVFHRMECRREG---LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVE 117
R+ R VI VFHR+ R+ +P+ L + + LK ++ + ER +LKE+GF HV+
Sbjct: 139 RRIRDVINVFHRLRQLRDKKKPVPL----LLDQDYVNLKNQIIKAERRVLKELGFCVHVK 194
Query: 118 HPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQI 175
HPHK I YL LE L Q +WN NDSLRT + VRF+ E +AC +Y AAR +I
Sbjct: 195 HPHKIIVMYLQVLECERNQHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEI 254
Query: 176 PLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPK 209
PLP P W+ F A + I E+C + LY+ K
Sbjct: 255 PLPNRPHWFLLFGATEEEIQEICLKILQLYARKK 288
>sp|Q5ZJP9|CCNL1_CHICK Cyclin-L1 OS=Gallus gallus GN=CCNL1 PE=2 SV=1
Length = 534
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ MATGQVLF RF+ +SF + ++ V+ + V LASK+EE+PR+ R VI VFHR+
Sbjct: 106 PQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRHL 165
Query: 77 REG---LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP 133
RE +P+ + +++ LK ++ + ER +LKE+GF HV+HPHK I YL LE
Sbjct: 166 REKKKPVPL----ILDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECE 221
Query: 134 LE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEK 191
L Q +WN NDSLRT + VRF+ E +AC +Y AAR +IPLP P W+ F +
Sbjct: 222 RNQHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGTTE 281
Query: 192 SGIDEVCRVLAHLYSLPK 209
I E+C + LY+ K
Sbjct: 282 EEIQEICLKILQLYTRKK 299
>sp|Q6GN15|CCNL1_XENLA Cyclin-L1 OS=Xenopus laevis GN=ccnl1 PE=2 SV=2
Length = 496
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 122/217 (56%), Gaps = 15/217 (6%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESP 60
+Q AG ++ PQ MATGQVLFHRF+ +SF + +I+A + + LASK+EE+P
Sbjct: 70 IQSAGILLRL------PQVAMATGQVLFHRFFYSKSFVKHSFEIIAMACINLASKIEEAP 123
Query: 61 RKARQVIIVFH---RMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVE 117
R+ R VI V H ++ +R P+ + + + K + + ER ILKE+GF HV+
Sbjct: 124 RRIRDVINVCHHLRQIRAKRTPSPL----ILDQSYINTKNHVIKAERRILKELGFCVHVK 179
Query: 118 HPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQI 175
HPHK I YL LE L Q AWN ND LRT + VRF +E +AC +Y AAR Q+
Sbjct: 180 HPHKIIVMYLQVLECERNQTLVQTAWNYMNDCLRTNVFVRFDAETIACACIYLAARALQL 239
Query: 176 PLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 212
LP P W+ F A + I ++C LYS K Y
Sbjct: 240 SLPNRPHWFLLFGATEENIQDICITTLRLYSRIKPNY 276
>sp|Q52KE7|CCNL1_MOUSE Cyclin-L1 OS=Mus musculus GN=Ccnl1 PE=1 SV=1
Length = 532
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 125/217 (57%), Gaps = 15/217 (6%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESP 60
+Q AG ++ PQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+P
Sbjct: 96 IQAAGILLRL------PQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAP 149
Query: 61 RKARQVIIVFH---RMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVE 117
R+ R VI VFH ++ +R P+ + + + K ++ + ER +LKE+GF HV+
Sbjct: 150 RRIRDVINVFHHLRQLRGKRTPSPL----ILDQNYINTKNQVIKAERRVLKELGFCVHVK 205
Query: 118 HPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQI 175
HPHK I YL LE L Q AWN NDSLRT + VRF+ E +AC +Y AAR QI
Sbjct: 206 HPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQI 265
Query: 176 PLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 212
PLP P W+ F + I E+C LY+ K Y
Sbjct: 266 PLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY 302
>sp|Q9R1Q2|CCNL1_RAT Cyclin-L1 OS=Rattus norvegicus GN=Ccnl1 PE=1 SV=1
Length = 527
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 125/217 (57%), Gaps = 15/217 (6%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESP 60
+Q AG ++ PQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+P
Sbjct: 91 IQAAGILLRL------PQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAP 144
Query: 61 RKARQVIIVFH---RMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVE 117
R+ R VI VFH ++ +R P+ + + + K ++ + ER +LKE+GF HV+
Sbjct: 145 RRIRDVINVFHHLRQLRGKRTPSPL----ILDQNYINTKNQVIKAERRVLKELGFCVHVK 200
Query: 118 HPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQI 175
HPHK I YL LE L Q AWN NDSLRT + VRF+ E +AC +Y AAR QI
Sbjct: 201 HPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQI 260
Query: 176 PLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 212
PLP P W+ F + I E+C LY+ K Y
Sbjct: 261 PLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY 297
>sp|Q9UK58|CCNL1_HUMAN Cyclin-L1 OS=Homo sapiens GN=CCNL1 PE=1 SV=1
Length = 526
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 125/217 (57%), Gaps = 15/217 (6%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESP 60
+Q AG ++ PQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+P
Sbjct: 90 IQAAGILLRL------PQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAP 143
Query: 61 RKARQVIIVFH---RMECRREGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVE 117
R+ R VI VFH ++ +R P+ + + + K ++ + ER +LKE+GF HV+
Sbjct: 144 RRIRDVINVFHHLRQLRGKRTPSPL----ILDQNYINTKNQVIKAERRVLKELGFCVHVK 199
Query: 118 HPHKFISNYLATLETPLE--LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQI 175
HPHK I YL LE L Q AWN NDSLRT + VRF+ E +AC +Y AAR QI
Sbjct: 200 HPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFQPETIACACIYLAARALQI 259
Query: 176 PLPENPPWWKAFDAEKSGIDEVCRVLAHLYSLPKAKY 212
PLP P W+ F + I E+C LY+ K Y
Sbjct: 260 PLPTRPHWFLLFGTTEEEIQEICIETLRLYTRKKPNY 296
>sp|Q2QQS5|CCT14_ORYSJ Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1
Length = 543
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 108/195 (55%), Gaps = 10/195 (5%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT V HRFY ++S A+ D + +A ++LA K+EE+PR + VI+V + + +
Sbjct: 80 PQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHK 139
Query: 77 RE---GLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP 133
++ G I+ +++ ++ + + ER +L +GF +V HP+K + + +
Sbjct: 140 KDPAAGQRIKQKEVYDQQKELILL----AERVVLATLGFDLNVHHPYKPLVEAIRKFKVA 195
Query: 134 LE-LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP--WWKAFDAE 190
L Q AWN ND LRT+LC++FK +A G ++ AA+ ++ LP + WW+ FD
Sbjct: 196 QNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVT 255
Query: 191 KSGIDEVCRVLAHLY 205
++EV + LY
Sbjct: 256 PRQLEEVSNQMLELY 270
>sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2
Length = 490
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 8/248 (3%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT V HRF+ ++S A+ D + +A ++LA K+EE+PR + VI++ + + +
Sbjct: 81 PQVTIATAIVFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHK 140
Query: 77 REGLPIEHLDLFSKKFSELKMEMS-RTERHILKEMGFVCHVEHPHKFISNYLATLETPLE 135
++ ++ + K+ E + E+ ER +L +GF +V HP+K + + +
Sbjct: 141 KDAAAVQRIK--QKEVYEQQKELILLGERVVLVTLGFDLNVHHPYKPLVEAIKKFKVAQN 198
Query: 136 -LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP--WWKAFDAEKS 192
L Q AWN ND LRT+LC++FK +A G ++ AA+ ++ LP + WW+ FD
Sbjct: 199 ALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPR 258
Query: 193 GIDEVCRVLAHLYSLPKAKYIPVCKDGTSFTFSSKTVDSQPQSTPKEVLQSSPQANNHTT 252
++EV + LY + + P G SS +V +Q S P + +
Sbjct: 259 QLEEVSNQMLELYE--QNRVAPPPSQGNDTEGSSASVVNQRASGKAPGSSEEPPTHENHL 316
Query: 253 FPIEALVP 260
P ++ P
Sbjct: 317 APRQSSTP 324
>sp|Q8GYM6|CCT14_ARATH Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1
Length = 541
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT + HRF+ ++S AR D + +A ++LA K+EE+PR + VI+V + + +
Sbjct: 77 PQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHK 136
Query: 77 REGLPIEHLDLFSKKFSELKMEMS-RTERHILKEMGFVCHVEHPHKFISNYLATLETPLE 135
++ P + K+ E + E+ E+ +L +GF +V HP+K + + +
Sbjct: 137 KD--PTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQN 194
Query: 136 -LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP--WWKAFDAEKS 192
L Q AWN ND LRT+LC++FK +A G ++ AA+ ++ LP + WW+ FD
Sbjct: 195 ALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPR 254
Query: 193 GIDEVCRVLAHLY 205
+++V + LY
Sbjct: 255 QLEDVSNQMLELY 267
>sp|Q9C8P7|CCT11_ARATH Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1
Length = 247
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT VL RF+ ++S + D K VA +++A K+E SPR A V+ V +R+
Sbjct: 51 PQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFN 110
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYL---ATLETP 133
+E P+ + F LKM + E+ +L + +EHP+K + +++ E
Sbjct: 111 KE--PLRDV------FERLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDG 162
Query: 134 LELRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLP--ENPPWWKAFDAEK 191
L Q A+N NDSLRT+LC++F +A +Y ++ LP + WW+ FD K
Sbjct: 163 RRLCQAAFNFVNDSLRTSLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTK 222
Query: 192 SGIDEVCRVLAHLY 205
+ E+C + LY
Sbjct: 223 RQLWEICDQMLDLY 236
>sp|Q9FKE6|CCT15_ARATH Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2
Length = 579
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT + HRF+ ++S A+ D + +A ++LA K+EE+PR + VI V + + +
Sbjct: 77 PQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINK 136
Query: 77 REGLPIEHLDLFSKKFSELKMEMS-RTERHILKEMGFVCHVEHPHKFISNYLATLETPLE 135
++ P + K+ E + E+ E+ +L +GF +V HP+K + + +
Sbjct: 137 KD--PGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQN 194
Query: 136 -LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP--WWKAFDAEKS 192
L Q AWN ND LRT+LC++FK +A G ++ AA+ ++ LP + WW+ FD
Sbjct: 195 ALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPR 254
Query: 193 GIDEVCRVLAHLY 205
+++V + LY
Sbjct: 255 QLEDVSNQMLELY 267
>sp|Q8N1B3|FA58A_HUMAN Cyclin-related protein FAM58A OS=Homo sapiens GN=FAM58A PE=1 SV=2
Length = 248
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 21 MATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGL 80
+AT ++H+F+C+ + +D ++A SS++LA K+EE + R +I V +R G
Sbjct: 48 IATACTIYHKFFCETNLDAYDPYLIAMSSIYLAGKVEEQHLRTRDIINVSNRY-FNPSGE 106
Query: 81 PIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE----- 135
P+E +F EL+ + + E +L+ + F +HPHK++ +YL +L+ L
Sbjct: 107 PLE----LDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLVSLQNWLNRHSWQ 162
Query: 136 ---LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLP----ENPPWWKAF- 187
+ AW L DS LC+RF+++ +A V+Y A + + + +P PWW+ F
Sbjct: 163 RTPVAVTAWALLRDSYHGALCLRFQAQHIAVAVLYLALQVYGVEVPAEVEAEKPWWQVFN 222
Query: 188 -DAEKSGIDEVCRVLAHLYSL 207
D K ID + L +Y++
Sbjct: 223 DDLTKPIIDNIVSDLIQIYTM 243
>sp|Q8QZR8|FA58B_MOUSE Cyclin-related protein FAM58B OS=Mus musculus GN=Fam58b PE=2 SV=2
Length = 250
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 21 MATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGL 80
+AT ++H+F+C+ + +D+ +VA SS++LA K+EE + R +I V HR
Sbjct: 50 IATACTIYHKFFCEINLDAYDLYLVAMSSIYLAGKVEEQHLRTRDIINVSHRY-FNPGSE 108
Query: 81 PIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE----- 135
P+E +F EL+ + + E +L+ + F +HPHK++ +YL +L+ L
Sbjct: 109 PLE----LDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQ 164
Query: 136 ---LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLP----ENPPWWKAF- 187
+ AW L DS LC+RF+++ +A V+Y A + + + +P PWW+ F
Sbjct: 165 RTPISVTAWALLRDSYHGGLCLRFQAQHLAVAVLYLALQVYGVEVPAEGEAEKPWWQVFS 224
Query: 188 -DAEKSGIDEVCRVLAHLYSL 207
D K ID + L +Y++
Sbjct: 225 DDLTKPIIDNIVSDLIQIYTM 245
>sp|Q4QQW5|FA58A_RAT Cyclin-related protein FAM58A OS=Rattus norvegicus GN=Fam58a PE=2
SV=1
Length = 250
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 21 MATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGL 80
+AT ++H+F+C+ + +D+ +VA SS++LA K+EE + R +I V HR
Sbjct: 50 IATACTIYHKFFCEINLDAYDLYLVAMSSLYLAGKVEEQHLRTRDIINVSHRY-FNPGSE 108
Query: 81 PIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE----- 135
P+E +F EL+ + + E +L+ + F +HPHK++ +YL +L+ L
Sbjct: 109 PLE----LDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQ 164
Query: 136 ---LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLP----ENPPWWKAF- 187
+ AW L DS LC+RF+++ +A V+Y A + + + +P PWW+ F
Sbjct: 165 RTPISVTAWALLRDSYHGGLCLRFQAQHLAVAVLYLALQVYGVEVPAEGEAEKPWWQVFS 224
Query: 188 -DAEKSGIDEVCRVLAHLYSL 207
D K ID + L +Y++
Sbjct: 225 DDLTKPIIDNIVSDLIQIYTM 245
>sp|O75909|CCNK_HUMAN Cyclin-K OS=Homo sapiens GN=CCNK PE=1 SV=2
Length = 580
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 21/199 (10%)
Query: 20 VMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREG 79
+ATG + FHRFY SF +F + A ++LA K+EE+P+K + +I + +
Sbjct: 70 TLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQ- 128
Query: 80 LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP----LE 135
F + + K E+ ER +L+ + F VEHP++F+ Y L+ +
Sbjct: 129 --------FGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK 180
Query: 136 LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAAR--RFQIPLPENPP----WWKAF-- 187
L Q AW NDSL TTL ++++ E++A V+Y A R +F+I + P WW+ F
Sbjct: 181 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ 240
Query: 188 DAEKSGIDEVCRVLAHLYS 206
D ++++C + LYS
Sbjct: 241 DVPVDVLEDICHQILDLYS 259
>sp|Q6Z7H3|CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2
Length = 630
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 11/201 (5%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT + HRFY +S A+ + +A ++LASK+E++P QVI V + R
Sbjct: 62 PQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYR 121
Query: 77 RE---GLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLE-T 132
R+ I D+F K+ K + ER +L + F +++HP++ + + + L +
Sbjct: 122 RDPATARRIHQKDVFEKQ----KALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGIS 177
Query: 133 PLELRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP--WWKAFDAE 190
E++Q AWN ND L+TTLC+++K + +A G +Y AA+ + LP + WW FD
Sbjct: 178 QKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVA 237
Query: 191 KSGIDEVCRVLAHLYSLPKAK 211
++ V + + + + KAK
Sbjct: 238 PKPLEAVLQQMREMVHM-KAK 257
>sp|O88874|CCNK_MOUSE Cyclin-K OS=Mus musculus GN=Ccnk PE=1 SV=3
Length = 554
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 20 VMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREG 79
+ATG + FHRFY SF +F + A ++LA K+EE+P+K + +I + +
Sbjct: 70 TLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQ- 128
Query: 80 LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETP----LE 135
F + + K E+ ER +L+ + F VEHP++F+ Y L+ +
Sbjct: 129 --------FGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQK 180
Query: 136 LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAAR--RFQIPLPENPP----WWKAF-- 187
L Q AW NDSL TTL ++++ E++A V+Y A R +F+I + P WW+ F
Sbjct: 181 LVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQ 240
Query: 188 DAEKSGIDEVCRVLAHLYSLPKAK 211
D ++++C + LYS K +
Sbjct: 241 DVPVDVLEDICHQILDLYSQGKQQ 264
>sp|Q0E474|CCT11_ORYSJ Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2
Length = 446
Score = 94.4 bits (233), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT +L HRFY ++S A+ + + VA V+LASK+E++P ++VIIV + R
Sbjct: 53 PQVTIATATLLCHRFYLRQSHAKNEWQTVATVCVFLASKIEDTPCPLQRVIIVAYETMYR 112
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRT-ERHILKEMGFVCHVEHPHKFISNYLATLET-PL 134
++ ++ K+ E + E+ E +L + F +++HP++ + L L +
Sbjct: 113 KDCNAAHR--IYQKEVLEKQKELILVGETLLLSTIRFDFNIQHPYEPLKLALKKLGIFQM 170
Query: 135 ELRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP-WWKAFDAEKSG 193
E++Q A NL ND++RTTL V+FK +A G +Y AA+ LP + WW FD
Sbjct: 171 EVKQVAVNLINDAIRTTLVVQFKPHYIAAGSLYLAAKFNNFRLPSDGKVWWHEFDVAPKQ 230
Query: 194 IDEVCRVLAHLY 205
+ V + + L+
Sbjct: 231 LQAVIQQMTELF 242
>sp|Q6NRK9|FA58A_XENLA Cyclin-related protein FAM58A OS=Xenopus laevis GN=fam58a PE=2 SV=2
Length = 244
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 21 MATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGL 80
+AT ++H+FY + S +D +VA S+++LA K+EE + R +I V HR
Sbjct: 44 IATACTIYHKFYKETSLENYDPHLVAMSAIYLAGKVEEQHLRTRDIINVCHRYN-NPGSE 102
Query: 81 PIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLE----- 135
P+E KF EL+ + E +L+ + F +HPHK++ +YL +L+ +
Sbjct: 103 PLE----VDSKFWELRDNIVHCELLMLRMLNFRVSFQHPHKYLLHYLISLKNWMNRHSWE 158
Query: 136 ---LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENP----PWWKAF- 187
+ AW L DS LC+R++ + +A V+Y A + + + +P N WW+ F
Sbjct: 159 RTPIATAAWALLRDSYHGDLCLRYEPQQIAVAVLYFALQCYGVEVPSNSNAETSWWQVFS 218
Query: 188 -DAEKSGIDEVCRVLAHLYSL 207
D I+ + L H+Y++
Sbjct: 219 EDITILTINNIISDLIHIYTM 239
>sp|P0C7Q3|FA58B_HUMAN Putative cyclin-related protein FAM58B OS=Homo sapiens GN=FAM58BP
PE=5 SV=1
Length = 252
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 21 MATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHR-MECRREG 79
+AT ++ +F+C+ FD ++A SS++LA K+EE P A +I V +R E
Sbjct: 52 IATACTIYPKFFCETILDAFDPYLIAMSSIYLAGKVEEQPLWAHDIISVSNRYFNPSSEP 111
Query: 80 LPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQ- 138
L ++ + EL+ + + E +L+ + F +HPHK++ YL +L+ L
Sbjct: 112 LGLD------SRLWELRDSIVQRELLMLRVLRFQVSFQHPHKYLLYYLVSLKNWLNCHSW 165
Query: 139 -------EAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPP----WWKAF 187
AW L DS LC+RF+++ +A V+Y A + + + +P WW+AF
Sbjct: 166 QRTPVAVTAWALLRDSYHGGLCLRFQAQHIAVVVLYLALQVYGVEVPAEVEAEKLWWQAF 225
Query: 188 --DAEKSGIDEVCRVLAHLYSL 207
D K ID + L +Y++
Sbjct: 226 SDDLTKPIIDTIVSDLIQIYTI 247
>sp|O60583|CCNT2_HUMAN Cyclin-T2 OS=Homo sapiens GN=CCNT2 PE=1 SV=2
Length = 730
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 8/175 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY SF +F+ I+++++++LA+K+EE RK VI V H C
Sbjct: 55 QLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAH--ACLH 112
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
P+ LD + + E+ E +L+ +GF +EHPH + + +L
Sbjct: 113 PLEPL--LDTKCDAYLQQTQELVILETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLA 170
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLP-ENPPWWKAFD 188
Q ++ +A +SL TT C+++K V+AC ++ A + ++IP+ + WW+ D
Sbjct: 171 QTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVD 225
>sp|O94612|YFO5_SCHPO Uncharacterized cyclin-L1-like protein C1296.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1296.05c PE=3 SV=1
Length = 258
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 1 MQYAGSIVSFICVVYRPQAVMATGQVLFHRFYCKRSFARF-DVKIVAASSVWLASKLEES 59
+Q AG +++ Q + +LF R YC R D+ + + V + SK E+
Sbjct: 35 IQEAGVLLNL------TQNCVIVCLILFRR-YCTLYPPRVPDLDAIVMACVSIGSKTTET 87
Query: 60 PRKARQV--IIVFHRMECRREGLP----IEHLDLFSKKFSELKMEMSRTERHILKEMGFV 113
P + + ++V+ + + I H DL+S++ + +S E +L+ + F
Sbjct: 88 PASVQDICNVVVYLKERFKDTNFEARGFIAH-DLYSEEMYSSRNRLSNMELEVLRALNFD 146
Query: 114 CHVEHPHKFISNYLATLE--TPLELRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAAR 171
H+ PHK +YL TL+ +L Q WN ND+ RT LCV + +ACG + AAR
Sbjct: 147 THIVIPHKLAIHYLQTLQLIDNKKLLQITWNFLNDASRTRLCVLYPPFSLACGCIAMAAR 206
Query: 172 RFQIPLPENPPWWKAFDAEKSGIDEVCRVLAHLY 205
+ LP++ W++ FD K ID + +L + Y
Sbjct: 207 VIGMKLPKD--WYRVFDTTKEEIDSLTSILENFY 238
>sp|Q8HXN7|CCNT1_PANTR Cyclin-T1 OS=Pan troglodytes GN=CCNT1 PE=2 SV=1
Length = 725
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +
Sbjct: 55 QLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQ 114
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
E LP D S+ + + ++ E IL+ +GF ++HPH + + +L
Sbjct: 115 ESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLA 170
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLP-ENPPWWKAFDA 189
Q ++ +A +SL TT +++ VVAC ++ A + ++IP+ + WW+ DA
Sbjct: 171 QTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDA 226
>sp|O60563|CCNT1_HUMAN Cyclin-T1 OS=Homo sapiens GN=CCNT1 PE=1 SV=1
Length = 726
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +
Sbjct: 56 QLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQ 115
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
E LP D S+ + + ++ E IL+ +GF ++HPH + + +L
Sbjct: 116 ESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLA 171
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLP-ENPPWWKAFDA 189
Q ++ +A +SL TT +++ VVAC ++ A + ++IP+ + WW+ DA
Sbjct: 172 QTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDA 227
>sp|Q9XT26|CCNT1_HORSE Cyclin-T1 OS=Equus caballus GN=CCNT1 PE=1 SV=1
Length = 727
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +
Sbjct: 56 QLTINTAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHACLHPQ 115
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
E LP D S+ + + ++ E IL+ +GF ++HPH + + +L
Sbjct: 116 ESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLA 171
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLP-ENPPWWKAFDA 189
Q ++ +A +SL TT +++ VVAC ++ A + ++IP+ + WW+ DA
Sbjct: 172 QTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDA 227
>sp|O74627|CG1C_SCHPO Cyclin pch1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pch1 PE=1 SV=1
Length = 342
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 112/242 (46%), Gaps = 12/242 (4%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT + FHRFY + S + VAA+ ++LA+K+E+S RK R ++I ++ +
Sbjct: 61 PQTALATANIYFHRFYLRFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQK 120
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLAT-LETPLE 135
+ + D +K++ + + TE +L+ + F VEHP+ ++ +++ +
Sbjct: 121 NSNVLV---DEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFIKKFVADDKN 177
Query: 136 LRQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPEN----PPWWKAFDAEK 191
+ + AW NDS R+ C+ + + +A A + +I L P W +
Sbjct: 178 VTKVAWTYINDSTRSIACLLYSPKTIAAAAFQFALEKNEINLSTTTDGLPVWMEESQVSY 237
Query: 192 SGIDEVCRVLAHLYSL--PKAKYIPVCKDGTSFTFSSKTVDSQPQSTPKEVLQSSPQANN 249
+ V ++ LY P + +P+ D + + +S P S Q++PQ N
Sbjct: 238 EDVKGVLTLIDSLYKKINPSKQALPI--DQKNGSHASSVAPGTPSSLASVSTQATPQHQN 295
Query: 250 HT 251
+
Sbjct: 296 SS 297
>sp|Q6T8E9|CCNT1_BOVIN Cyclin-T1 OS=Bos taurus GN=CCNT1 PE=1 SV=1
Length = 727
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY +SF +F VA ++++LA+K+EE P+K VI V H +
Sbjct: 56 QLTINTAIVYMHRFYMIQSFTQFHRNSVAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQ 115
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
E LP D S+ + + ++ E IL+ +GF ++HPH + + +L
Sbjct: 116 ESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLA 171
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLP-ENPPWWKAFDA 189
Q ++ +A +SL TT +++ VVAC ++ A + ++IP+ + WW+ DA
Sbjct: 172 QTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDA 227
>sp|O96433|CCNT_DROME Cyclin-T OS=Drosophila melanogaster GN=CycT PE=1 SV=2
Length = 1097
Score = 80.1 bits (196), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 13/170 (7%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY SF F +A++S++LA+K+EE PRK VI ++
Sbjct: 89 QLCINTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKC---- 144
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
LP + ++EL E+ E +L+ +GF ++HPH + ++ +L
Sbjct: 145 --LP----PTTEQNYAELAQELVFNENVLLQTLGFDVAIDHPHTHVVRTCQLVKACKDLA 198
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLPENPPWW 184
Q ++ LA++SL T++C++++ VVAC +Y A + R++IP W
Sbjct: 199 QTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWEIPQSTEGKHW 248
>sp|Q9QWV9|CCNT1_MOUSE Cyclin-T1 OS=Mus musculus GN=Ccnt1 PE=1 SV=3
Length = 724
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q + T V HRFY +SF +F +A ++++LA+K+EE P+K VI V H +
Sbjct: 56 QLTINTAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQ 115
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
E LP D S+ + + ++ E IL+ +GF ++HPH + + +L
Sbjct: 116 ESLP----DTRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLA 171
Query: 138 QEAWNLANDSLR-TTLCVRFKSEVVACGVVYAAAR--RFQIPLP-ENPPWWKAFDA 189
Q ++ +A +SL TT +++ VVAC ++ A + ++IP+ + WW+ DA
Sbjct: 172 QTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDA 227
>sp|Q503D6|FA58A_DANRE Cyclin-related protein FAM58A OS=Danio rerio GN=fam58a PE=2 SV=1
Length = 247
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 21 MATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRREGL 80
MAT VL+HRF+ S ++ +VA S++ LA K+EE + R +I V HR +
Sbjct: 50 MATACVLYHRFFQSASLQIYEPYLVAMSAIHLAGKVEEQHLRTRDIINVCHRY-FHPDSE 108
Query: 81 PIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELRQEA 140
P+E + KF EL+ + + E IL+++ F EHPHK++ +YL ++ + L + A
Sbjct: 109 PLE----LNGKFWELRDSIVQCELLILRQLNFQVTFEHPHKYLLHYLLSVRSLLN--RHA 162
Query: 141 WN----------LANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENP-PWWKAF-- 187
W+ + DS ++CVR + + +A +Y A + + + LP WW+
Sbjct: 163 WSRTPIAETALAVLKDSYHGSVCVRHRPQHLALTALYLALQTYGVQLPRGELEWWQVVCA 222
Query: 188 DAEKSGIDEVCRVLAHLYSL 207
D K+ I+ + L LY +
Sbjct: 223 DITKAQIETIMSELLQLYDM 242
>sp|Q8LBC0|CCT13_ARATH Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2
Length = 317
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q ++ V+ HRFY ++S A+ D + +A SS++LA K E+ P + V++ + E
Sbjct: 79 QVTISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASY--EIIY 136
Query: 78 EGLPIEHLDLFSKK-FSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLEL 136
E P + + + + E K + E +L F +E P+K ++ L L +L
Sbjct: 137 EWDPSASIRIHQTECYHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPDL 196
Query: 137 RQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAE----KS 192
AWN +D +RTTLC+++K V+A V+ AA + WW F K
Sbjct: 197 ATAAWNFVHDWIRTTLCLQYKPHVIATATVHLAATFQNAKVGSRRDWWLEFGVTTKLLKE 256
Query: 193 GIDEVCRVL 201
I E+C ++
Sbjct: 257 VIQEMCTLI 265
>sp|Q5RD50|CCNL1_PONAB Cyclin-L1 OS=Pongo abelii GN=CCNL1 PE=3 SV=1
Length = 172
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ MATGQVLFHRF+ +SF + +IVA + + LASK+EE+PR+ R VI VFH +
Sbjct: 100 PQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQL 159
Query: 77 R 77
R
Sbjct: 160 R 160
>sp|Q86KE7|CCNC_DICDI Cyclin-C OS=Dictyostelium discoideum GN=cycC PE=3 SV=1
Length = 255
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 18/194 (9%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q ++T V F RFY K SF + ++VA + ++L+SK+EE +A++ C
Sbjct: 59 QRAISTAIVYFKRFYLKNSFVDCEPRLVAVTCLYLSSKVEECITQAKK---------CAA 109
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
+ I+H F+ L ++ E +L+E+ F + HP+K + YL +
Sbjct: 110 KMKEIDH------SFNYLMNDILECEFFVLEELDFCLIIYHPYKSLPFYLQSSGLDPASI 163
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
+ W + NDS RT +C+ + VV G + + + + + W + E I EV
Sbjct: 164 EIIWGIVNDSYRTDVCLLYPPFVVGLGCILLGSYLLKKDIKQ---WLSELNVEMKDIWEV 220
Query: 198 CRVLAHLYSLPKAK 211
+ L Y K +
Sbjct: 221 SKDLIDYYEFEKQQ 234
>sp|Q56YF8|CCT12_ARATH Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=2
Length = 460
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 17 PQAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECR 76
PQ +AT HRF+ ++S A+ D + +A + LA K+EE+P VII + +
Sbjct: 75 PQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHK 134
Query: 77 REGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHK----FISNYLATLET 132
++ + +++ ++ EL + E +L + F + HP+K I Y+ +
Sbjct: 135 KDLAGAQRKEVYDQQ-KELVL---IGEELVLSTLNFDLCISHPYKPLVEAIKKYMVE-DA 189
Query: 133 PLELRQEAWNLANDSLRTTLCVRFK 157
+L Q AWN ND LRTTLC++++
Sbjct: 190 KTQLAQFAWNFVNDCLRTTLCLQYQ 214
>sp|P93411|CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp. japonica GN=Os09g0504400 PE=2
SV=1
Length = 257
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT F R Y ++S +D ++VA + ++LASK+EES +AR ++ +M
Sbjct: 59 QRVIATAVTYFRRVYTRKSMTEYDPRLVAPTCLYLASKVEESTVQARLLVFYIKKMCASD 118
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
E E D+ L+MEM +L+ + + V HP++ + L +L
Sbjct: 119 EKYRFEIKDI-------LEMEMK-----LLEALDYYLVVYHPYRPLLQLLQDAGIT-DLT 165
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAA 170
Q AW + ND+ + L + ++A +Y A+
Sbjct: 166 QFAWGIVNDTYKMDLILIHPPYMIALACIYIAS 198
>sp|P24863|CCNC_HUMAN Cyclin-C OS=Homo sapiens GN=CCNC PE=1 SV=2
Length = 283
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 59 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIA-----AAT 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L F K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 114 SVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 174 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 230
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 231 IRVILKLY 238
>sp|P55168|CCNC_CHICK Cyclin-C OS=Gallus gallus GN=CCNC PE=2 SV=1
Length = 283
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 59 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLI-----SAAT 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L F K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 114 SVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 174 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 230
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 231 IRVILKLY 238
>sp|Q62447|CCNC_MOUSE Cyclin-C OS=Mus musculus GN=Ccnc PE=2 SV=4
Length = 283
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 59 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIA-----ATT 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L F K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 114 SVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 174 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 230
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 231 IRVILKLY 238
>sp|Q3ZCK5|CCNC_BOVIN Cyclin-C OS=Bos taurus GN=CCNC PE=2 SV=1
Length = 283
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 59 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIA-----AAT 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L F K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 114 SVLKTRFSYAFPKEFPYKMNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 174 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 230
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 231 IRVILKLY 238
>sp|Q4KLA0|CCNC_XENLA Cyclin-C OS=Xenopus laevis GN=ccnc PE=2 SV=1
Length = 283
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 59 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLI-----SAAT 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L F K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 114 SVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 174 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 230
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 231 IRVILKLY 238
>sp|Q28F72|CCNC_XENTR Cyclin-C OS=Xenopus tropicalis GN=ccnc PE=2 SV=1
Length = 283
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 59 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLI-----SAAT 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L F K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 114 SVLKTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDMLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 174 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 230
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 231 IRVILKLY 238
>sp|P39947|CCNC_RAT Cyclin-C OS=Rattus norvegicus GN=Ccnc PE=2 SV=2
Length = 278
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 8/188 (4%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + V+LASK+EE + +I
Sbjct: 54 QQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIA-----ATT 108
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
L K+F + E ++L+ M V HP++ + Y+ + L
Sbjct: 109 SVLKTRFSYASPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDMGQEDVLL 168
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
AW + ND+ RT LC+ + ++A ++ A + + W+ + I E+
Sbjct: 169 PLAWRIVNDTYRTDLCLLYPPFMIALACLHVACV---VQQKDARQWFAELSVDMEKILEI 225
Query: 198 CRVLAHLY 205
RV+ LY
Sbjct: 226 IRVILKLY 233
>sp|P25008|CCNC_DROME Cyclin-C OS=Drosophila melanogaster GN=CycC PE=1 SV=1
Length = 267
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + + LASK+EE + +I C +
Sbjct: 59 QQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISI----C-Q 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
+ + ++++F + E ++L+ + V P++ + + + +L
Sbjct: 114 SAIKTKFSYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
+W + NDSLRT +C+ + +A + A Q + W+ + + + E+
Sbjct: 174 TLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQKDATKQ--WFAELNVDLDKVQEI 231
Query: 198 CRVLAHLYSLPK 209
R + +LY L K
Sbjct: 232 VRAIVNLYELWK 243
>sp|Q29AI1|CCNC_DROPS Cyclin-C OS=Drosophila pseudoobscura pseudoobscura GN=CycC PE=3
SV=1
Length = 267
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 7/192 (3%)
Query: 18 QAVMATGQVLFHRFYCKRSFARFDVKIVAASSVWLASKLEESPRKARQVIIVFHRMECRR 77
Q V+AT V F RFY + S D ++A + + LASK+EE + +I C +
Sbjct: 59 QQVIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISI----C-Q 113
Query: 78 EGLPIEHLDLFSKKFSELKMEMSRTERHILKEMGFVCHVEHPHKFISNYLATLETPLELR 137
+ + ++++F + E ++L+ + V P++ + + + +L
Sbjct: 114 SAIKTKFSYAYTQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLL 173
Query: 138 QEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRFQIPLPENPPWWKAFDAEKSGIDEV 197
+W + NDSLRT +C+ + +A + A Q W+ + + + E+
Sbjct: 174 TLSWRIVNDSLRTDVCLLYPPYQIAIACLQIACVILQ--KDSTKQWFAELNVDLDKVQEI 231
Query: 198 CRVLAHLYSLPK 209
R + +LY + K
Sbjct: 232 VRAIVNLYEMWK 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,443,707
Number of Sequences: 539616
Number of extensions: 4063926
Number of successful extensions: 8899
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 8708
Number of HSP's gapped (non-prelim): 106
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)